Sed0019655 (gene) Chayote v1

Overview
NameSed0019655
Typegene
OrganismSechium edule (Chayote v1)
Descriptionmitochondrial import receptor subunit TOM6 homolog
LocationLG05: 44646380 .. 44649005 (-)
RNA-Seq ExpressionSed0019655
SyntenySed0019655
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATTTCTACTTCAAAAAATGAAAAATAAATAAATAAAAACCCAGTGTTTTCTGTTCGGGCTTAAACCCACACAAAAGCAAGTCGAAAAAAAAAGAAATCCGAAATCAGAGTCTAGGGTTTTACCATCAACTTCCTATCAAAAAATGTTTCCGGGAATGTTTATGCGTAAGCCGGAGAAGGCTGCAGCTCTCAAGCAGCTCCGATCTCACGCCGCCGTGTTCGGCGTTTGGGTTGCCGTAATTCGAGTCACCCCCTATGTTCTTCACTTCCTTTCCGACGAGAAACAACAACTCCGCCTCGACTTTTAGCTCTTTCTCTAAGGTATTTCCACTCCGTTTTCTGTATTCTTCTTCTACGCCTTTCTAATTTTAGGGTTTGGAATGTCCTGTGTTTCGATTTTGAGTAATCATGCTATTCCATCCCGATTTCGACCTCCTGATCTATGTATTGTGTATGTATCATCATCCCTTGGAAATTTGTTCGAATAGATTAAGTCTTGTTTTGAAATACATCTCTTCTTGTTCGATTGCGCCTTTAACGAACGATTTCAGGCCAATTGTTTGCTGAGAAACCGTTGATTTTGTAAACTTGCCGCTTAGCAGGTTTTGGTATGTTGAGTATGTGGTTTTTTATTAGATAACGCATCTCTAAATTATTTGCCTATGAAAAATGTTGCTTATGCTTTTATTAATGATTCAAGTCTCCTCATTATGTCCCTGAAGTTGTTGTCTTATTGGGTTCACCATTCTTGGGTTGGATTGAAATTTATAGATGGAATATCTGTTTGGGCTGAATAACTTGTAATATTTTCTTAACTATTTAGCTTTAGGGCCCGGGCGAGACTGTGATGAACTAATTCTACCGGTAGTATTTGGATAAAATAAGTGATTGTGCTGGATTGGTAATATTTCGTTTTGCTTATTGCTAATTGCTACATTAGTTGGTCCTCAAGGGGTGGTGCGGTGGTTGAAAACTTGGGCTTTGAGAGTTTGTTCCCCTCAAGATCTTGAGTTTGAGACTCACATGTGACATTACTCCTTCGATATCTTCAGTGCCTGGTCTAGAGACGGGCGTGGTTTCCCTTGTTTCAAAATAAAATTTGCTACATTAGTTGAAATATGACGCTAAATTAAAAAAAAACTTGAATTTTCTCTGGCTTGATCTCTCTCAAAATGCTTTTGGGCTGGTTTGACCCTGGGCCATTAGTCTATAGTCTATACCTCATTACTGTATATATAGTATATCAGCATCTAATTTTTCTATTACTTAGATTAAATTACTGTTTGAAGAAGATTCCATACTTGGTTCCTGTTCAGTTCATTGTTGGAAGTTGTGTGATGAAACAATAATAACATAAACGATAGGGGTACTTCTGAACTCTTTTGAAATCAAATCAAATGCACAACACCAGCACTGAAACCCACGTTCACTACCCGCAAGACAACCAAATAGTCAATAAGCTACACACTGTTTTGGTCATCTTCAGATTAGTAGGAAATTCTACTACCTCTTTGCTTCATTCTATTGTGATCTTTTTTAGGTTTCAGTGGTTTATTTTGTCTGGTGATACATACTGATATCTTGTAAATTGTAATAATTTATGATTGCGAATCCGTAGATAAACTTTTTTGCTCATCACTTCCCCCTGTATATTACTTATCGAAAAATGGAACATGACCCTGTTAATCTTGAAGCCAAGCCTGGCTTGCAGTGATTTGCTTGACTATTCTCTCATGTTCGCCACTTTTTCTTCATTTCTTTCTTTAAGTTGATCAACTGTAACTGCTTTTCTGCCTAGTTAGCTACTTGCTTGACAACTATATTTTGAATCTCGTTTCGTTTATTTGTGTCGCTGTTGTTTAGTTCACTATTTCCGGACTATAAATTGATTTTAGTTTTAATGATCATGGTTGACCTAGTAATAAAGACATTGTAAATAATAAAGTGCCAAGTTCACGGCGACCACATACTTAAGAAGTAACGTTAAGAATAGTGAAAGTGTATGCAAGCTAGCTCAATCATTCATAGATGTTAAGAAAATAGTTATTTCGGTGGCATTAATGTAGCTCCTTGTGTCAAAGCTTCTTTCTACTTCTGGTTATTACTTGCATGTGTCTATTTGTATTAAGATTTGCACAAATCACTTACCATTTCCTTCCTCATTCTGTATGCAGTTCTCTTTTGGAGCATTGGGTGAAGGCTTTCCAAATCATAACCTTTTTTTTCCTTCTATTTATCTCATGGGCAAAAGAGGGAAGGAGGCTTGATCAACTTTTCATTATTTTCCATTTTTACTGTTTTCTATGAAATCATAGGCAGTTTATTATCATGTGTGATGAGACTTGAAATCATTCCATTAAAATCTCAGGCTGCATTACAGATAGTTGGTAGAATGTGTTTAATGTAAGATGCAGTTGACACTGTCCTTTCTTCTCAGCCAAAGTTATTGGCCTCAATTATTATCATAACTTCTCTTCTTTCTCCCAAATTAAACTCTCTTTCAGAATGTATCAATGTAATACATTTCCTTAACCAAAATTAAGGAGATCACATTACTATATTGCTCAATTGGCCTCATAATGGTAGCTCTAACAAAGTCCATTGTATTGTGTTTTTCAGTTAAA

mRNA sequence

ATTATTTCTACTTCAAAAAATGAAAAATAAATAAATAAAAACCCAGTGTTTTCTGTTCGGGCTTAAACCCACACAAAAGCAAGTCGAAAAAAAAAGAAATCCGAAATCAGAGTCTAGGGTTTTACCATCAACTTCCTATCAAAAAATGTTTCCGGGAATGTTTATGCGTAAGCCGGAGAAGGCTGCAGCTCTCAAGCAGCTCCGATCTCACGCCGCCGTGTTCGGCGTTTGGGTTGCCGTAATTCGAGTCACCCCCTATGTTCTTCACTTCCTTTCCGACGAGAAACAACAACTCCGCCTCGACTTTTAGCTCTTTCTCTAAGTTCTCTTTTGGAGCATTGGGTGAAGGCTTTCCAAATCATAACCTTTTTTTTCCTTCTATTTATCTCATGGGCAAAAGAGGGAAGGAGGCTTGATCAACTTTTCATTATTTTCCATTTTTACTGTTTTCTATGAAATCATAGGCAGTTTATTATCATGTGTGATGAGACTTGAAATCATTCCATTAAAATCTCAGGCTGCATTACAGATAGTTGGTAGAATGTGTTTAATGTAAGATGCAGTTGACACTGTCCTTTCTTCTCAGCCAAAGTTATTGGCCTCAATTATTATCATAACTTCTCTTCTTTCTCCCAAATTAAACTCTCTTTCAGAATGTATCAATGTAATACATTTCCTTAACCAAAATTAAGGAGATCACATTACTATATTGCTCAATTGGCCTCATAATGGTAGCTCTAACAAAGTCCATTGTATTGTGTTTTTCAGTTAAA

Coding sequence (CDS)

ATGTTTCCGGGAATGTTTATGCGTAAGCCGGAGAAGGCTGCAGCTCTCAAGCAGCTCCGATCTCACGCCGCCGTGTTCGGCGTTTGGGTTGCCGTAATTCGAGTCACCCCCTATGTTCTTCACTTCCTTTCCGACGAGAAACAACAACTCCGCCTCGACTTTTAG

Protein sequence

MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF
Homology
[Close]
BLAST of Sed0019655 vs. NCBI nr
Match: XP_004154290.1 (mitochondrial import receptor subunit TOM6 homolog [Cucumis sativus] >XP_008459248.1 PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Cucumis melo] >XP_011649217.1 mitochondrial import receptor subunit TOM6 homolog [Cucumis sativus] >XP_022943932.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita moschata] >XP_022943933.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita moschata] >XP_022948071.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita moschata] >XP_022986654.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita maxima] >XP_022986655.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita maxima] >XP_022986656.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita maxima] >XP_023007537.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita maxima] >XP_023511843.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita pepo subsp. pepo] >XP_023511844.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita pepo subsp. pepo] >XP_023532551.1 mitochondrial import receptor subunit TOM6 homolog [Cucurbita pepo subsp. pepo] >XP_038900853.1 mitochondrial import receptor subunit TOM6 homolog [Benincasa hispida] >KAA0045963.1 Mitochondrial import receptor subunit TOM6 -like protein [Cucumis melo var. makuwa] >KGN61761.1 hypothetical protein Csa_006573 [Cucumis sativus] >TYK13622.1 Mitochondrial import receptor subunit TOM6 -like protein [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 7.1e-19
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54

[Close]
BLAST of Sed0019655 vs. NCBI nr
Match: XP_022148517.1 (mitochondrial import receptor subunit TOM6 homolog [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 2.1e-18
Identity = 46/54 (85.19%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+L+F
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLEF 54

[Close]
BLAST of Sed0019655 vs. NCBI nr
Match: OAY29459.1 (hypothetical protein MANES_15G146500v8 [Manihot esculenta])

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 43/54 (79.63%), Postives = 52/54 (96.30%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQL++H A+FGVWVAV+RVTPY+LHFLSDEK +L+L+F
Sbjct: 1  MFPGMFMRKPDKAAALKQLKTHVAMFGVWVAVVRVTPYILHFLSDEKDELKLEF 54

[Close]
BLAST of Sed0019655 vs. NCBI nr
Match: XP_002519115.1 (mitochondrial import receptor subunit TOM6 homolog [Ricinus communis] >EEF43326.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 98.6 bits (244), Expect = 1.8e-17
Identity = 43/54 (79.63%), Postives = 52/54 (96.30%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQL++HAA+FG WVA+IRVTPYVLH+LSD+K +L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLKTHAAIFGAWVALIRVTPYVLHYLSDDKDELKLDF 54

[Close]
BLAST of Sed0019655 vs. NCBI nr
Match: XP_038992352.1 (mitochondrial import receptor subunit TOM6 homolog [Hibiscus syriacus])

HSP 1 Score: 98.2 bits (243), Expect = 2.3e-17
Identity = 43/54 (79.63%), Postives = 52/54 (96.30%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQL++H A+FGVWVAV+RVTPYVLH+LSDEK +L+L+F
Sbjct: 1  MFPGMFMRKPDKAAALKQLKAHVAMFGVWVAVVRVTPYVLHYLSDEKDELKLEF 54

[Close]
BLAST of Sed0019655 vs. ExPASy Swiss-Prot
Match: Q9XIA7 (Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana OX=3702 GN=TOM6 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.9e-16
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KA ALKQLR+H A+FG WV +IR  PYVL + SD K +L++DF
Sbjct: 1  MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSYFSDSKDELKIDF 54

[Close]
BLAST of Sed0019655 vs. ExPASy TrEMBL
Match: A0A6J1JEM5 (mitochondrial import receptor subunit TOM6 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484330 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54

[Close]
BLAST of Sed0019655 vs. ExPASy TrEMBL
Match: A0A6J1FXI3 (mitochondrial import receptor subunit TOM6 homolog OS=Cucurbita moschata OX=3662 GN=LOC111448504 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54

[Close]
BLAST of Sed0019655 vs. ExPASy TrEMBL
Match: A0A5A7TQX5 (Mitochondrial import receptor subunit TOM6-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001260 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54

[Close]
BLAST of Sed0019655 vs. ExPASy TrEMBL
Match: A0A0A0LP29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238770 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54

[Close]
BLAST of Sed0019655 vs. ExPASy TrEMBL
Match: A0A1S3C9U8 (mitochondrial import receptor subunit TOM6 homolog OS=Cucumis melo OX=3656 GN=LOC103498428 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 47/54 (87.04%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KAAALKQLRSH A+FGVWVAVIRVTPYVLH+LSDEK++L+LDF
Sbjct: 1  MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54

[Close]
BLAST of Sed0019655 vs. TAIR 10
Match: AT1G49410.1 (translocase of the outer mitochondrial membrane 6 )

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-17
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 1  MFPGMFMRKPEKAAALKQLRSHAAVFGVWVAVIRVTPYVLHFLSDEKQQLRLDF 55
          MFPGMFMRKP+KA ALKQLR+H A+FG WV +IR  PYVL + SD K +L++DF
Sbjct: 1  MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSYFSDSKDELKIDF 54

The following BLAST results are available for this feature:
BLAST of Sed0019655 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004154290.17.1e-1987.04mitochondrial import receptor subunit TOM6 homolog [Cucumis sativus] >XP_0084592... [more]
XP_022148517.12.1e-1885.19mitochondrial import receptor subunit TOM6 homolog [Momordica charantia][more]
OAY29459.11.3e-1779.63hypothetical protein MANES_15G146500v8 [Manihot esculenta][more]
XP_002519115.11.8e-1779.63mitochondrial import receptor subunit TOM6 homolog [Ricinus communis] >EEF43326.... [more]
XP_038992352.12.3e-1779.63mitochondrial import receptor subunit TOM6 homolog [Hibiscus syriacus][more]
BLAST of Sed0019655 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XIA75.9e-1666.67Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana OX=37... [more]
BLAST of Sed0019655 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JEM53.4e-1987.04mitochondrial import receptor subunit TOM6 homolog OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1FXI33.4e-1987.04mitochondrial import receptor subunit TOM6 homolog OS=Cucurbita moschata OX=3662... [more]
A0A5A7TQX53.4e-1987.04Mitochondrial import receptor subunit TOM6-like protein OS=Cucumis melo var. mak... [more]
A0A0A0LP293.4e-1987.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238770 PE=4 SV=1[more]
A0A1S3C9U83.4e-1987.04mitochondrial import receptor subunit TOM6 homolog OS=Cucumis melo OX=3656 GN=LO... [more]
BLAST of Sed0019655 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G49410.14.2e-1766.67translocase of the outer mitochondrial membrane 6 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..54
IPR034554Mitochondrial import receptor subunit TOM6 homologue, plantsPANTHERPTHR35999MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM6 HOMOLOGcoord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019655.1Sed0019655.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005742 mitochondrial outer membrane translocase complex