Sed0019645 (gene) Chayote v1

Overview
NameSed0019645
Typegene
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S21
LocationLG02: 48847916 .. 48850874 (+)
RNA-Seq ExpressionSed0019645
SyntenySed0019645
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAACTAGGGCTTCTTTAAAATTAGGGTTTGTTCAACGCGATTGTCTCTTCGTCTCGGATAGCTCGTTTCCTCTGGTAAGCTGTGGTTCGTAGTCGAATAATCTTTTGCTCTTTAAGCTCTTCAAATTGAATCTATTTTCGGTCTCATTAGGGATTTCAGTATTTTCAGTAATCAAAATCGTACGTCGTATGAACCACTAATCGTTTCTGTTCAAGCAGGTTCTCTAATTCGGAAGAATTATTCGATACAATCACCAAGATGCAGAACGAAGAGGGAAAAATCACAGAGCTCTACATTCCCAGAAAATGGTTCGTAATATTATCTTGCTTTTGATGATTTTGCGCAAATTTTCATGTGTTGTGAACATTGTTTATGATTTATTGCGTCTTTGATACAGCTCTGCCACGAATCGGCTGATTACTTCCAAGGACCATGCCTCTGTTCAGATCAACATTGGGCATTTGGATGAGAATGGTATCTACACGGGCCAGTTCTCCACTTTTGCTCTCTGTGGTTTCATTCGGGCCCAGGTGATTGTTCTTTGTCTTTCTCTCTTGTTGGGTTTGTAGCGATAGGATGCTGTGTAATCCCTAATATCTTAGGGTATGTTTGGAGCACTGATTTGGTTATGCTAGACGGAAGGTTATGATAAATGGTGGGATATTATAAATGGTGTTTGAAGGGCAAATTATTATTATTATGATAAACGGTGTTTGAGAGGCTTGTTACGCAACAAAAAGTAATATATGTAAGGTTTAGATAAATAGGTACGTAAGTTTAGATAAATGGGCACATAGGTTTAGACAACCACCGTTTATAATAAATAGTGGGGCAAACATCGGTTGAGTTATTATAATCAACTCGGCCGTTTACATAAACGGGTCCCAAACACACCCAAGACATTCTGTTTTACTCTCTGTTTTGATGCAAATTGCAATTCAGTTACTTTTGTTGCAATTTGTTGTGTTGAAGTATTGTTTCAGACCGACGAATTGAGCATGCTTGGTTATTTTATGTTTGTTCTCCTGGAAAAGGGTGTGTAAATTTATTGATATCTGTGAGTATGTAGGCCAGCTTACGCACACCTCGACTATTTTCACGTTGTGATTTGCTATTGAACATGGATTATTCAGCCTCGTATGCAATTCTTCTGTTCAGAGTGTGAATCCTATTTTATGAGCTGCGATAACTAATTGAAACTAATTTTTGACGCCAAAATAAAGAATACAAAGAAGTTATAGGTCGACTAAATCATAGTCCTAGAGAAGAAACATTGAACATAGCTAGCCTGAATTCATAGACAATAATAATAAAGAAAACCTTATTGAAAGTTAAGGAAGTGGAAGAAATCTGAAAAAAATCAGTCCACAAAGGCATTTTTTGGTGTCTCCATTAGCCCTAACTTCTTGAATGGTAAGAGAAGCCATTGGAGAGTAAGCAGGTTTTAAGTGCACAATTTTTTCCTGTCAAATCTTGTTATATTTCTGTCCCCACACGTTGGAATCTGGGTTGATGAGAGTTCATTTTTTTTTTTTTTGATATCCATGACTTGCCGAACCAGCTTGCATGCACTACCACCTCACTTACAACATTTGATTGCTAAGAAAATACTTAAGAAATTAATTTCTAGGTAGGTGACCATTATGAATTGAACTCATTCGCTCTTAGTTGTCCAAGGTCAAGACCATTAGGCCACTCCATAATAGTGAGTTTAAGACTTATTTCAATGTGAGATTGATGCTGTCAATATTTATGTCGGTAAATAACGATTTGTGGGTTGACTTTAGTTTCCTTGAATTCAATCCATGACAGCCACTTACTTAAGAAATAATTTCCTACGAATCTTCTTTACATCTAAATGTCTTAAGATGAGACGAAATTTTTTTGTAAGATTTCTATACTTAAGAATTGGAATCTCCTAATGGATGTCTGAGGCTTCTGTCGTCTATATGAGATTGATGCTTTCTTCCATGTCTTTTGCTGTTGCTTGTATATTTGGCCTTCTTGATTGCGTTCCACATATTTCTTAGTGTTAAAGACGTCGGAAATGCGAGAAGACTTCCTAGCATTTATAAGATATATGAACTAGTCTATTCATTGTCAATTGAGTTCAAGAAGAAACCTCACCCCATACTATCTAAAATACATGCTCCTAATCTTCAATTTTCATGTTCATTTGGTTTTTGGTAGTTGTTGTGTAACTAGTTATCCATGGAGATGTCCACGGGGCGGGGATGGGAAATGGCTTCTCTGTTCTCGTCACCAAAATCATTCCCCGTCCCCGCAAATTTTTTTTTTGCGGGGATTTGGGGCGAGAATTCCCTATTCGATTTTTTTTTTCTTTTTTTTAATATTTTTTGAATTAAATCTTAAATAATTAACTATTAAGAAAAAAAATGTTCATTTGAATATATAATTTCACCAAAAAATATTTAAATGAGATAAAAATTATTTTTAATAAAAAAATTGTAAACAGGGCGGGATCGGGGAAACGGAGTTGTGGAATACATTTTCTGTCCCTGGCCTCGTTTTTCTCACGAGAAATTTTTTCTTCCCGGCCCCGTTTCCTGCCCTGTTAGGAGCGGGTACCCGCAGGGAAAATGAAGCACTCTAGTTATCCATTATAATATATTGCTGTACTTATGGCGGTTTCTCTTATTTTGTACAGGGAGATGCTGACAGTGCACTGGATCGGCTCTGGCAGAAGAAAAAAGTTGAAATTCATCAATAATAGATGAATCTGCTGTTCTGTTTCATCTCTATATCAAAGTTTTCAAGGATAGAGATTCACTTTTATATAGTTTTGAGAACCTATCATACTTTAAGTAGTTTCTTTTGACATTTTAAACTTTTCTTGAATTGCAAACTCAACAACACCTGAGCCATGTTTTGATAGGTAAAAAGAACAAAACTAAGGTGGTGAATGAAATTTGTTAAAATGATTTTCCATTTA

mRNA sequence

AAAAAAAAACTAGGGCTTCTTTAAAATTAGGGTTTGTTCAACGCGATTGTCTCTTCGTCTCGGATAGCTCGTTTCCTCTGGTAAGCTGTGGTTCTCTAATTCGGAAGAATTATTCGATACAATCACCAAGATGCAGAACGAAGAGGGAAAAATCACAGAGCTCTACATTCCCAGAAAATGCTCTGCCACGAATCGGCTGATTACTTCCAAGGACCATGCCTCTGTTCAGATCAACATTGGGCATTTGGATGAGAATGGTATCTACACGGGCCAGTTCTCCACTTTTGCTCTCTGTGGTTTCATTCGGGCCCAGGGAGATGCTGACAGTGCACTGGATCGGCTCTGGCAGAAGAAAAAAGTTGAAATTCATCAATAATAGATGAATCTGCTGTTCTGTTTCATCTCTATATCAAAGTTTTCAAGGATAGAGATTCACTTTTATATAGTTTTGAGAACCTATCATACTTTAAGTAGTTTCTTTTGACATTTTAAACTTTTCTTGAATTGCAAACTCAACAACACCTGAGCCATGTTTTGATAGGTAAAAAGAACAAAACTAAGGTGGTGAATGAAATTTGTTAAAATGATTTTCCATTTA

Coding sequence (CDS)

ATGCAGAACGAAGAGGGAAAAATCACAGAGCTCTACATTCCCAGAAAATGCTCTGCCACGAATCGGCTGATTACTTCCAAGGACCATGCCTCTGTTCAGATCAACATTGGGCATTTGGATGAGAATGGTATCTACACGGGCCAGTTCTCCACTTTTGCTCTCTGTGGTTTCATTCGGGCCCAGGGAGATGCTGACAGTGCACTGGATCGGCTCTGGCAGAAGAAAAAAGTTGAAATTCATCAATAA

Protein sequence

MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRAQGDADSALDRLWQKKKVEIHQ
Homology
[Close]
BLAST of Sed0019645 vs. NCBI nr
Match: XP_022950628.1 (40S ribosomal protein S21-2-like [Cucurbita moschata] >KAG6597520.1 40S ribosomal protein S21-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 2.7e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLW KKKVE+HQ
Sbjct: 61 QGDADSALDRLWHKKKVEVHQ 81

[Close]
BLAST of Sed0019645 vs. NCBI nr
Match: XP_022973757.1 (40S ribosomal protein S21-2-like [Cucurbita maxima] >XP_022975174.1 40S ribosomal protein S21-2-like [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 6.0e-38
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLD+NGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDDNGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLW KKKVE+HQ
Sbjct: 61 QGDADSALDRLWHKKKVEVHQ 81

[Close]
BLAST of Sed0019645 vs. NCBI nr
Match: XP_004134210.2 (40S ribosomal protein S21-2 [Cucumis sativus] >XP_008438883.1 PREDICTED: 40S ribosomal protein S21-2 [Cucumis melo] >XP_008458454.1 PREDICTED: 40S ribosomal protein S21-2 [Cucumis melo] >XP_016898984.1 PREDICTED: 40S ribosomal protein S21-2 [Cucumis melo] >XP_038879937.1 40S ribosomal protein S21-2 [Benincasa hispida] >XP_038906504.1 40S ribosomal protein S21-2 [Benincasa hispida] >XP_038906506.1 40S ribosomal protein S21-2 [Benincasa hispida] >KAA0049493.1 40S ribosomal protein S21-2 [Cucumis melo var. makuwa] >KGN57104.1 hypothetical protein Csa_010287 [Cucumis sativus] >TYK16172.1 40S ribosomal protein S21-2 [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 6.0e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQKKKVE+ Q
Sbjct: 61 QGDADSALDRLWQKKKVEVRQ 81

[Close]
BLAST of Sed0019645 vs. NCBI nr
Match: XP_022138287.1 (40S ribosomal protein S21-2 [Momordica charantia] >XP_022138288.1 40S ribosomal protein S21-2 [Momordica charantia] >XP_022138289.1 40S ribosomal protein S21-2 [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGH+DENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHVDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQKKKVE+ Q
Sbjct: 61 QGDADSALDRLWQKKKVEVRQ 81

[Close]
BLAST of Sed0019645 vs. NCBI nr
Match: XP_022930553.1 (40S ribosomal protein S21-2-like [Cucurbita moschata] >XP_023000447.1 40S ribosomal protein S21-2-like [Cucurbita maxima] >XP_023513574.1 40S ribosomal protein S21-2-like [Cucurbita pepo subsp. pepo] >KAG6593967.1 40S ribosomal protein S21-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026309.1 40S ribosomal protein S21-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-37
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQIN+GHLDENGIYTGQFSTFALCG+IRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINVGHLDENGIYTGQFSTFALCGYIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQKKKVE+ Q
Sbjct: 61 QGDADSALDRLWQKKKVEVRQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy Swiss-Prot
Match: Q3E902 (40S ribosomal protein S21-2 OS=Arabidopsis thaliana OX=3702 GN=RPS21C PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 3.1e-37
Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEG++TELYIPRKCSATNRLITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGF+RA
Sbjct: 1  MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADS +DRLWQKKKVE  Q
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy Swiss-Prot
Match: Q9M337 (40S ribosomal protein S21-1 OS=Arabidopsis thaliana OX=3702 GN=RPS21B PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-35
Identity = 66/81 (81.48%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          M+N+ G++TELYIPRKCSATNR+ITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGF+RA
Sbjct: 1  MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADS +DRLWQKKKVE  Q
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy Swiss-Prot
Match: P35687 (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS21 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.2e-34
Identity = 64/81 (79.01%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEG++ +LY+PRKCSATNR+IT+KDHASVQINIGH+DENG+Y G+F+TFAL GFIRA
Sbjct: 1  MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQK+K E+ Q
Sbjct: 61 QGDADSALDRLWQKRKAEVKQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy Swiss-Prot
Match: Q41852 (40S ribosomal protein S21 OS=Zea mays OX=4577 GN=RPS21 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 5.5e-34
Identity = 65/81 (80.25%), Postives = 73/81 (90.12%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGK  +LY+PRKCSATNR+IT+KDHASVQINIGHLD NG+Y G F+TFAL GF+RA
Sbjct: 1  MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADS+LDRLWQKKK EI Q
Sbjct: 61 QGDADSSLDRLWQKKKAEIKQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy Swiss-Prot
Match: Q9SMI2 (40S ribosomal protein S21 OS=Cyanophora paradoxa OX=2762 GN=RPS21 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-25
Identity = 51/75 (68.00%), Postives = 67/75 (89.33%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDEN-GIYTGQFSTFALCGFIR 60
          MQN+EGKI +LYIPRKCSATNRLI++ DHA+VQIN+GH+D N G+YTG ++TFALCGF+R
Sbjct: 1  MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60

Query: 61 AQGDADSALDRLWQK 75
          + G++D+AL+RL  K
Sbjct: 61 SMGESDAALNRLCVK 75

[Close]
BLAST of Sed0019645 vs. ExPASy TrEMBL
Match: A0A6J1GFE6 (40S ribosomal protein S21 OS=Cucurbita moschata OX=3662 GN=LOC111453667 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLW KKKVE+HQ
Sbjct: 61 QGDADSALDRLWHKKKVEVHQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy TrEMBL
Match: A0A6J1IJN4 (40S ribosomal protein S21 OS=Cucurbita maxima OX=3661 GN=LOC111474210 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLD+NGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDDNGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLW KKKVE+HQ
Sbjct: 61 QGDADSALDRLWHKKKVEVHQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy TrEMBL
Match: A0A1S4DSM1 (40S ribosomal protein S21 OS=Cucumis melo OX=3656 GN=LOC103483842 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQKKKVE+ Q
Sbjct: 61 QGDADSALDRLWQKKKVEVRQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy TrEMBL
Match: A0A5D3CXC9 (40S ribosomal protein S21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001000 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQKKKVE+ Q
Sbjct: 61 QGDADSALDRLWQKKKVEVRQ 81

[Close]
BLAST of Sed0019645 vs. ExPASy TrEMBL
Match: A0A0A0L7W3 (40S ribosomal protein S21 OS=Cucumis sativus OX=3659 GN=Csa_3G154280 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA
Sbjct: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADSALDRLWQKKKVE+ Q
Sbjct: 61 QGDADSALDRLWQKKKVEVRQ 81

[Close]
BLAST of Sed0019645 vs. TAIR 10
Match: AT5G27700.1 (Ribosomal protein S21e )

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-38
Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          MQNEEG++TELYIPRKCSATNRLITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGF+RA
Sbjct: 1  MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADS +DRLWQKKKVE  Q
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQ 81

[Close]
BLAST of Sed0019645 vs. TAIR 10
Match: AT3G53890.1 (Ribosomal protein S21e )

HSP 1 Score: 149.8 bits (377), Expect = 9.3e-37
Identity = 66/81 (81.48%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          M+N+ G++TELYIPRKCSATNR+ITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGF+RA
Sbjct: 1  MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADS +DRLWQKKKVE  Q
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQ 81

[Close]
BLAST of Sed0019645 vs. TAIR 10
Match: AT3G53890.2 (Ribosomal protein S21e )

HSP 1 Score: 149.8 bits (377), Expect = 9.3e-37
Identity = 66/81 (81.48%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 1  MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60
          M+N+ G++TELYIPRKCSATNR+ITSKDHASVQ+NIGHLD NG+YTGQF+TFALCGF+RA
Sbjct: 1  MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRA 60

Query: 61 QGDADSALDRLWQKKKVEIHQ 82
          QGDADS +DRLWQKKKVE  Q
Sbjct: 61 QGDADSGVDRLWQKKKVEAKQ 81

The following BLAST results are available for this feature:
BLAST of Sed0019645 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950628.12.7e-3897.5340S ribosomal protein S21-2-like [Cucurbita moschata] >KAG6597520.1 40S ribosoma... [more]
XP_022973757.16.0e-3896.3040S ribosomal protein S21-2-like [Cucurbita maxima] >XP_022975174.1 40S ribosoma... [more]
XP_004134210.26.0e-3897.5340S ribosomal protein S21-2 [Cucumis sativus] >XP_008438883.1 PREDICTED: 40S rib... [more]
XP_022138287.11.3e-3796.3040S ribosomal protein S21-2 [Momordica charantia] >XP_022138288.1 40S ribosomal ... [more]
XP_022930553.11.7e-3795.0640S ribosomal protein S21-2-like [Cucurbita moschata] >XP_023000447.1 40S riboso... [more]
BLAST of Sed0019645 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3E9023.1e-3786.4240S ribosomal protein S21-2 OS=Arabidopsis thaliana OX=3702 GN=RPS21C PE=1 SV=2[more]
Q9M3371.3e-3581.4840S ribosomal protein S21-1 OS=Arabidopsis thaliana OX=3702 GN=RPS21B PE=1 SV=1[more]
P356873.2e-3479.0140S ribosomal protein S21 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS21 PE=3... [more]
Q418525.5e-3480.2540S ribosomal protein S21 OS=Zea mays OX=4577 GN=RPS21 PE=3 SV=1[more]
Q9SMI22.1e-2568.0040S ribosomal protein S21 OS=Cyanophora paradoxa OX=2762 GN=RPS21 PE=3 SV=1[more]
BLAST of Sed0019645 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GFE61.3e-3897.5340S ribosomal protein S21 OS=Cucurbita moschata OX=3662 GN=LOC111453667 PE=3 SV=... [more]
A0A6J1IJN42.9e-3896.3040S ribosomal protein S21 OS=Cucurbita maxima OX=3661 GN=LOC111474210 PE=3 SV=1[more]
A0A1S4DSM12.9e-3897.5340S ribosomal protein S21 OS=Cucumis melo OX=3656 GN=LOC103483842 PE=3 SV=1[more]
A0A5D3CXC92.9e-3897.5340S ribosomal protein S21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0L7W32.9e-3897.5340S ribosomal protein S21 OS=Cucumis sativus OX=3659 GN=Csa_3G154280 PE=3 SV=1[more]
BLAST of Sed0019645 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27700.12.2e-3886.42Ribosomal protein S21e [more]
AT3G53890.19.3e-3781.48Ribosomal protein S21e [more]
AT3G53890.29.3e-3781.48Ribosomal protein S21e [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 1..81
e-value: 1.6E-38
score: 128.7
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 1..77
e-value: 6.6E-39
score: 131.9
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 1..81
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 1..80
e-value: 2.8E-42
score: 144.5
NoneNo IPR availablePANTHERPTHR10442:SF1340S RIBOSOMAL PROTEIN S21coord: 1..81
IPR018279Ribosomal protein S21e, conserved sitePROSITEPS00996RIBOSOMAL_S21Ecoord: 11..19

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019645.1Sed0019645.1mRNA
Sed0019645.2Sed0019645.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0003735 structural constituent of ribosome