Sed0019592 (gene) Chayote v1

Overview


Name	Sed0019592
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ motif-containing protein
Location	LG14: 23077262 .. 23077679 (+)
RNA-Seq Expression	Sed0019592
Synteny	Sed0019592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCACCGGGTCACCCGAACCCGCAAACCGACCCGCCTCCCAAAACCCACATCCCGCCCACTAAACCCGTTCCCACACGCCAACACTCCAATTTCAAGCTCTACGAGCGCAGAAACGCCGTTAAGAATCTCAAAATCAACCCCGTTTTCGCCGGGTTCTCGCCGAGAAACGAAATTCCTTCCCCTAGTTTGCTCGATTTTCCGTCGTTGACTCTCAGCCCCGTTACGCCGTTGACTCCCGACCCCTTCCTCCGATCGCAGCCGTTGGATTGTGCTCCGGCGAATCCAACGGTGGATGAAGAAGCGGAGGCTAAAGCCATTAGAGAAAAGGGATTTTATTTGCACCCGTCGCCGGCCGCCACTCCTAAAGAATCGGAGCCGCCGCAGCTTTTGCCTCTGTTTCCGATCACTTCTTGA

mRNA sequence

ATGCTCACCGGAAACGCCGTTAAGAATCTCAAAATCAACCCCGTTTTCGCCGGGTTCTCGCCGAGAAACGAAATTCCTTCCCCTAGTTTGCTCGATTTTCCGTCGTTGACTCTCAGCCCCGTTACGCCGTTGACTCCCGACCCCTTCCTCCGATCGCAGCCGTTGGATTGTGCTCCGGCGAATCCAACGGTGGATGAAGAAGCGGAGGCTAAAGCCATTAGAGAAAAGGGATTTTATTTGCACCCGTCGCCGGCCGCCACTCCTAAAGAATCGGAGCCGCCGCAGCTTTTGCCTCTGTTTCCGATCACTTCTTGA

Coding sequence (CDS)

ATGCTCACCGGAAACGCCGTTAAGAATCTCAAAATCAACCCCGTTTTCGCCGGGTTCTCGCCGAGAAACGAAATTCCTTCCCCTAGTTTGCTCGATTTTCCGTCGTTGACTCTCAGCCCCGTTACGCCGTTGACTCCCGACCCCTTCCTCCGATCGCAGCCGTTGGATTGTGCTCCGGCGAATCCAACGGTGGATGAAGAAGCGGAGGCTAAAGCCATTAGAGAAAAGGGATTTTATTTGCACCCGTCGCCGGCCGCCACTCCTAAAGAATCGGAGCCGCCGCAGCTTTTGCCTCTGTTTCCGATCACTTCTTGA

Protein sequence

MLTGNAVKNLKINPVFAGFSPRNEIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCAPANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS

Homology

[Close]

BLAST of Sed0019592 vs. NCBI nr
Match: KAG6594599.1 (VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           N + N +I+PVF    AGFSPRN  EI SP++LDFPSL LSPVTPL PDPF RSQPL+C 
Sbjct: 104 NLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRSQPLNCE 163

Query: 65  PA-----NPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+     NP VDE+AEAKAIREKGFYLHPSPA TP+ESE PQLLPLFP+TS
Sbjct: 164 PSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPVTS 213

[Close]

BLAST of Sed0019592 vs. NCBI nr
Match: XP_022926800.1 (VQ motif-containing protein 4-like [Cucurbita moschata])

HSP 1 Score: 143.7 bits (361), Expect = 9.1e-31
Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           N + N +I+PVF    AGFSPRN  EI SP++LDFPSL LSPVTPL PDPF RSQPL+C 
Sbjct: 103 NLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCE 162

Query: 65  PA-----NPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+     NP VDE+AEAKAIREKGFYLHPSPA TP+ESE PQLLPLFP+TS
Sbjct: 163 PSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPVTS 212

[Close]

BLAST of Sed0019592 vs. NCBI nr
Match: XP_023003679.1 (VQ motif-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           N + N +I+PVF    AGFSPRN  EI SP++LDFPSL LSPVTPL PDPF R+QPL+C 
Sbjct: 101 NLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRTQPLNCE 160

Query: 65  PA-----NPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+     NP VDE+AEAKAIREKGFYLHPSPA TP+ESE PQLLPLFP+TS
Sbjct: 161 PSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPVTS 210

[Close]

BLAST of Sed0019592 vs. NCBI nr
Match: XP_023517089.1 (VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           N + N +I+PVF    AGFSPRN  EI SP++LDFP+L LSPVTPL PDPF RSQPL+C 
Sbjct: 102 NLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPTLVLSPVTPLIPDPFRRSQPLNCE 161

Query: 65  PA-----NPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+     NP VDE+AEAKAIREKGFYLHPSPA TP+ESE PQLLPLFP+TS
Sbjct: 162 PSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPVTS 211

[Close]

BLAST of Sed0019592 vs. NCBI nr
Match: XP_023543221.1 (VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 5.9e-30
Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           NA++NL+INPVF    AGFSPRN  EI SPS+LDFPSL +SPVTPL PDPF RSQPL+  
Sbjct: 72  NALRNLQINPVFASVTAGFSPRNHPEIHSPSMLDFPSLVISPVTPLIPDPFGRSQPLNSE 131

Query: 65  PANPT-----VDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+N       +D EAEAKAIREKGFYLHPSPA TP+ESE PQLLPLFPITS
Sbjct: 132 PSNNVSSNSGLDVEAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPITS 181

[Close]

BLAST of Sed0019592 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-22
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 5   NAVKNLKI-------NPVFAGFSPRN-EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLD 64
           N++KNLKI       NPV + FSPR  EI SPS+LDFPSL LSPVTPL PDPF RS   +
Sbjct: 133 NSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSN 192

Query: 65  CAPANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
            +P     +  AE KA++E+GFYLHPSPA TP + E P+LLPLFP+TS
Sbjct: 193 QSPN----ELAAEEKAMKERGFYLHPSPATTPMDPE-PRLLPLFPVTS 235

[Close]

BLAST of Sed0019592 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14
Identity = 48/102 (47.06%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 5   NAVKN-LKINPVFAGFSPRNEIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCAPAN-- 64
           N++K+ L INP  +G     EI +P++L+FP+L LSP TPL  DPF R      +P++  
Sbjct: 96  NSMKHYLNINPTHSG---PPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSK 155

Query: 65  PTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPIT 104
           P+ D++ E ++I+EKGFYL PSP+ TP+++E P+LL LFP+T
Sbjct: 156 PSFDDDQE-RSIKEKGFYLRPSPSTTPRDTE-PRLLSLFPMT 192

[Close]

BLAST of Sed0019592 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 19  FSPRNE------IPSPSLLDFPSLTL-SPVTPL--TPDPFLRSQPLDCAPANPTVDEEAE 78
           FSPRN       + SPS+LDFP L L SPVTPL    DPF +S PL         +   E
Sbjct: 151 FSPRNSSSSENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLG------NSSEE 210

Query: 79  AKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
            KAI +KGFYLHPSP +TP++S+ P LLPLFP+ S
Sbjct: 211 DKAIADKGFYLHPSPVSTPRDSQ-PLLLPLFPVAS 238

[Close]

BLAST of Sed0019592 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.2e-13
Identity = 55/117 (47.01%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 5   NAVKNLKINPVFAG--------FSPRN-EIPSPSLLDFPSLTL-SPVTPLTP-------D 64
           N   +L IN +  G        FSPRN EI SPS LDFP L L SPVTPL         D
Sbjct: 108 NLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSPVTPLKQGTNGNEGD 167

Query: 65  PFLRSQPLDCAPANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           PF +  PL             E + I +KG+YLH SP +TP++SE PQLLPLFP+TS
Sbjct: 168 PFDKMSPL-----------SEEERGIADKGYYLHRSPISTPRDSE-PQLLPLFPVTS 212

[Close]

BLAST of Sed0019592 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 37/87 (42.53%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 19  FSPRNEIPSPSLLDFPSLTLSPVTPLTPDP-FLRSQPLDCAPANPTVDEEAEAKAIREKG 78
           F P    PS S     +L  SPV   TP   F     ++  P + T + E E KAI+E+ 
Sbjct: 84  FKPTGTTPS-SKSGNTNLLTSPVG--TPSSLFSNLSLIEGEPDSCTTNIEEEEKAIKERR 143

Query: 79  FYLHPSPAATPKESEPPQLLPLFPITS 105
           FYLHPSP + P  +E P+LL LFP+TS
Sbjct: 144 FYLHPSPRSKPGYTE-PELLTLFPLTS 166

[Close]

BLAST of Sed0019592 vs. ExPASy TrEMBL
Match: A0A6J1EM47 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433810 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-31
Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           N + N +I+PVF    AGFSPRN  EI SP++LDFPSL LSPVTPL PDPF RSQPL+C 
Sbjct: 103 NLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLLLSPVTPLIPDPFRRSQPLNCE 162

Query: 65  PA-----NPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+     NP VDE+AEAKAIREKGFYLHPSPA TP+ESE PQLLPLFP+TS
Sbjct: 163 PSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPVTS 212

[Close]

BLAST of Sed0019592 vs. ExPASy TrEMBL
Match: A0A6J1KU05 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497201 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.6e-31
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           N + N +I+PVF    AGFSPRN  EI SP++LDFPSL LSPVTPL PDPF R+QPL+C 
Sbjct: 101 NLLNNFQISPVFASLTAGFSPRNYPEILSPTMLDFPSLVLSPVTPLIPDPFRRTQPLNCE 160

Query: 65  PA-----NPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P+     NP VDE+AEAKAIREKGFYLHPSPA TP+ESE PQLLPLFP+TS
Sbjct: 161 PSNNITINPPVDEQAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPVTS 210

[Close]

BLAST of Sed0019592 vs. ExPASy TrEMBL
Match: A0A6J1EIU9 (VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433020 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.9e-30
Identity = 79/111 (71.17%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           NA++NL+INPVF    AGFSPRN  EI SPS+LDFPSL +SPVTPL PDPF RSQPL+  
Sbjct: 122 NALRNLQINPVFASVTAGFSPRNHPEIHSPSMLDFPSLVISPVTPLIPDPFGRSQPLNSE 181

Query: 65  P-----ANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P     +NP +D EAEA AIREKGFYLHPSP  TP+ESE PQLLPLFPITS
Sbjct: 182 PSNNVSSNPGLDVEAEANAIREKGFYLHPSPTTTPRESE-PQLLPLFPITS 231

[Close]

BLAST of Sed0019592 vs. ExPASy TrEMBL
Match: A0A6J1IR60 (VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478627 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.3e-30
Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 5   NAVKNLKINPVF----AGFSPRN--EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCA 64
           NA++NL+I+PVF    AGFSPR   EI SPS+LDFPSL +SPVTPL PDPF RSQPL+  
Sbjct: 72  NALRNLQIDPVFASFTAGFSPRTHPEIHSPSMLDFPSLVISPVTPLIPDPFGRSQPLNSE 131

Query: 65  P-----ANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           P     +NP +D EAEAKAIREKGFYLHPSPA TP+ESE PQLLPLFPITS
Sbjct: 132 PSNNVSSNPGLDVEAEAKAIREKGFYLHPSPATTPRESE-PQLLPLFPITS 181

[Close]

BLAST of Sed0019592 vs. ExPASy TrEMBL
Match: A0A5D3CP65 (VQ motif-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007530 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.6e-26
Identity = 78/116 (67.24%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 5   NAVKNLK-INPVFAG--FSPRN------EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPL 64
           NA+ NL+ INPVFA    S RN      E+ SPS+LDFPSL LSPVTPL PDPF RSQPL
Sbjct: 99  NALHNLQIINPVFASSVSSLRNNNHNLPEVLSPSMLDFPSLVLSPVTPLIPDPFGRSQPL 158

Query: 65  DCAPANPTV-------DEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           +  P N  V       DEEAEAKAIREKGFYLHPSPA TP+ESE P+LLPLFPITS
Sbjct: 159 NSEPTNNNVSSSNSGLDEEAEAKAIREKGFYLHPSPATTPRESE-PELLPLFPITS 213

[Close]

BLAST of Sed0019592 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-23
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 5   NAVKNLKI-------NPVFAGFSPRN-EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLD 64
           N++KNLKI       NPV + FSPR  EI SPS+LDFPSL LSPVTPL PDPF RS   +
Sbjct: 133 NSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSN 192

Query: 65  CAPANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
            +P     +  AE KA++E+GFYLHPSPA TP + E P+LLPLFP+TS
Sbjct: 193 QSPN----ELAAEEKAMKERGFYLHPSPATTPMDPE-PRLLPLFPVTS 235

[Close]

BLAST of Sed0019592 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-23
Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 5   NAVKNLKI-------NPVFAGFSPRN-EIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLD 64
           N++KNLKI       NPV + FSPR  EI SPS+LDFPSL LSPVTPL PDPF RS   +
Sbjct: 133 NSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRSGSSN 192

Query: 65  CAPANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
            +P     +  AE KA++E+GFYLHPSPA TP + E P+LLPLFP+TS
Sbjct: 193 QSPN----ELAAEEKAMKERGFYLHPSPATTPMDPE-PRLLPLFPVTS 235

[Close]

BLAST of Sed0019592 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 48/102 (47.06%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 5   NAVKN-LKINPVFAGFSPRNEIPSPSLLDFPSLTLSPVTPLTPDPFLRSQPLDCAPAN-- 64
           N++K+ L INP  +G     EI +P++L+FP+L LSP TPL  DPF R      +P++  
Sbjct: 96  NSMKHYLNINPTHSG---PPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSK 155

Query: 65  PTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPIT 104
           P+ D++ E ++I+EKGFYL PSP+ TP+++E P+LL LFP+T
Sbjct: 156 PSFDDDQE-RSIKEKGFYLRPSPSTTPRDTE-PRLLSLFPMT 192

[Close]

BLAST of Sed0019592 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 77.4 bits (189), Expect = 7.5e-15
Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 19  FSPRNE------IPSPSLLDFPSLTL-SPVTPL--TPDPFLRSQPLDCAPANPTVDEEAE 78
           FSPRN       + SPS+LDFP L L SPVTPL    DPF +S PL         +   E
Sbjct: 151 FSPRNSSSSENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLG------NSSEE 210

Query: 79  AKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
            KAI +KGFYLHPSP +TP++S+ P LLPLFP+ S
Sbjct: 211 DKAIADKGFYLHPSPVSTPRDSQ-PLLLPLFPVAS 238

[Close]

BLAST of Sed0019592 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 75.1 bits (183), Expect = 3.7e-14
Identity = 55/117 (47.01%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 5   NAVKNLKINPVFAG--------FSPRN-EIPSPSLLDFPSLTL-SPVTPLTP-------D 64
           N   +L IN +  G        FSPRN EI SPS LDFP L L SPVTPL         D
Sbjct: 108 NLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSPVTPLKQGTNGNEGD 167

Query: 65  PFLRSQPLDCAPANPTVDEEAEAKAIREKGFYLHPSPAATPKESEPPQLLPLFPITS 105
           PF +  PL             E + I +KG+YLH SP +TP++SE PQLLPLFP+TS
Sbjct: 168 PFDKMSPL-----------SEEERGIADKGYYLHRSPISTPRDSE-PQLLPLFPVTS 212

The following BLAST results are available for this feature:

BLAST of Sed0019592 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594599.1	7.0e-31	71.17	VQ motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022926800.1	9.1e-31	71.17	VQ motif-containing protein 4-like [Cucurbita moschata]	[more]
XP_023003679.1	1.6e-30	70.27	VQ motif-containing protein 4-like [Cucurbita maxima]	[more]
XP_023517089.1	1.6e-30	70.27	VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023543221.1	5.9e-30	72.07	VQ motif-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0019592 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M750	2.1e-22	59.26	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
O23660	2.1e-14	47.06	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9FHZ3	1.1e-13	52.63	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q9LDZ1	5.2e-13	47.01	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q9FNP0	1.2e-04	42.53	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]

BLAST of Sed0019592 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EM47	4.4e-31	71.17	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433810...	[more]
A0A6J1KU05	7.6e-31	70.27	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497201 P...	[more]
A0A6J1EIU9	4.9e-30	71.17	VQ motif-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433020...	[more]
A0A6J1IR60	8.3e-30	71.17	VQ motif-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478627 P...	[more]
A0A5D3CP65	5.6e-26	67.24	VQ motif-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0019592 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28280.1	1.5e-23	59.26	VQ motif-containing protein	[more]
AT1G28280.2	1.5e-23	59.26	VQ motif-containing protein	[more]
AT2G33780.1	1.5e-15	47.06	VQ motif-containing protein	[more]
AT5G53830.1	7.5e-15	52.63	VQ motif-containing protein	[more]
AT3G15300.1	3.7e-14	47.01	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..104
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 5..104
IPR039827	VQ motif-containing protein 4/13	PANTHER	PTHR33402:SF16	VQ MOTIF-CONTAINING PROTEIN 13-RELATED	coord: 5..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019592.1	Sed0019592.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus