Sed0019562 (gene) Chayote v1

Overview


Name	Sed0019562
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR50-like
Location	LG11: 26335179 .. 26335980 (+)
RNA-Seq Expression	Sed0019562
Synteny	Sed0019562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTCCCAAAATCATCACATTCACAAAATTCTCTTCGTTTTCATTTCTCTAAGCTCCAATGGCGGTGGTGAAGCAGATCATGAAGCGGTGTTCCTCTTTGAGGACTAAGAAGAATCACCAAAACGGCGGCGCTGGCGGCGGTGGAGATATTCCGGTGGATGTTCCAAAACGCCATTTTGTGGTGTATGTTAGTGAGAATCGGAGCCGCTACATTGTGCCGTTGACTTTCTTGACCAGGCCTGAATTTCAAATTCTTCTACAATTGGCTGAGGAAGAGTTTGGATTCAACCACCATATGGGCCTTACTATCCCTTGCGAGGAGCAGGTCTTTCTGTCTTTAACTTCCATGCTTCGATGAACCGAACCAAACCGATCGAGTTCGAGCTCGTCCTGCGTAGCGGTTTAGGGTTATTGAGGTTTATATAAATATCTCCCTCTCCCTACGGAGCTGTTTTCGGCTATTAATGCACGTCGAAACAGCATTCGAGAAATTATTAGAGAAGGCTGAAACAATGTGCTCGAGTATAGATTTCGAATCTTCGTCAAACTAAACCAAGGCCGTGCTCGATAATTTTTCGCTTGGGGGAGCTTTTAGGGCTAGAATTCTCAAACAAACAGTACAAAATTTGTCTCCTTTTCTTTCCCAATTCGTTCTTGTTTCATAAATCCATAATTAAGTTTTTTTTTTCTTTCCATATTTTTCTTTTAGTTAAATTATTTATTTGATTTTATGGATATGGTTGGATGGGAGGATGAAATTTGGCTTTGTTGTTTTTTAAAAGAAAGACCAAAAAAATCAAC

mRNA sequence

TATCTCCCAAAATCATCACATTCACAAAATTCTCTTCGTTTTCATTTCTCTAAGCTCCAATGGCGGTGGTGAAGCAGATCATGAAGCGGTGTTCCTCTTTGAGGACTAAGAAGAATCACCAAAACGGCGGCGCTGGCGGCGGTGGAGATATTCCGGTGGATGTTCCAAAACGCCATTTTGTGGTGTATGTTAGTGAGAATCGGAGCCGCTACATTGTGCCGTTGACTTTCTTGACCAGGCCTGAATTTCAAATTCTTCTACAATTGGCTGAGGAAGAGTTTGGATTCAACCACCATATGGGCCTTACTATCCCTTGCGAGGAGCAGGTCTTTCTGTCTTTAACTTCCATGCTTCGATGAACCGAACCAAACCGATCGAGTTCGAGCTCGTCCTGCGTAGCGGTTTAGGGTTATTGAGGTTTATATAAATATCTCCCTCTCCCTACGGAGCTGTTTTCGGCTATTAATGCACGTCGAAACAGCATTCGAGAAATTATTAGAGAAGGCTGAAACAATGTGCTCGAGTATAGATTTCGAATCTTCGTCAAACTAAACCAAGGCCGTGCTCGATAATTTTTCGCTTGGGGGAGCTTTTAGGGCTAGAATTCTCAAACAAACAGTACAAAATTTGTCTCCTTTTCTTTCCCAATTCGTTCTTGTTTCATAAATCCATAATTAAGTTTTTTTTTTCTTTCCATATTTTTCTTTTAGTTAAATTATTTATTTGATTTTATGGATATGGTTGGATGGGAGGATGAAATTTGGCTTTGTTGTTTTTTAAAAGAAAGACCAAAAAAATCAAC

Coding sequence (CDS)

ATGGCGGTGGTGAAGCAGATCATGAAGCGGTGTTCCTCTTTGAGGACTAAGAAGAATCACCAAAACGGCGGCGCTGGCGGCGGTGGAGATATTCCGGTGGATGTTCCAAAACGCCATTTTGTGGTGTATGTTAGTGAGAATCGGAGCCGCTACATTGTGCCGTTGACTTTCTTGACCAGGCCTGAATTTCAAATTCTTCTACAATTGGCTGAGGAAGAGTTTGGATTCAACCACCATATGGGCCTTACTATCCCTTGCGAGGAGCAGGTCTTTCTGTCTTTAACTTCCATGCTTCGATGA

Protein sequence

MAVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR

Homology

[Close]

BLAST of Sed0019562 vs. NCBI nr
Match: KAG6598492.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.9 bits (424), Expect = 4.3e-38
Identity = 87/105 (82.86%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MAVVKQIMKRCSSLRTKKNHQN-----GGAG-GGGDIPVDVPKRHFVVYVSENRSRYIVP 60
           MAVVKQIMKRCS LR+ KN  N     GGAG G G+IPVDVPK HFVVYVSENRSRYIVP
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVP 60

Query: 61  LTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           LT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SLTSMLR
Sbjct: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105

[Close]

BLAST of Sed0019562 vs. NCBI nr
Match: XP_022997035.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 9.6e-38
Identity = 86/104 (82.69%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MAVVKQIMKRCSSLRTKKNHQN----GGAGGG--GDIPVDVPKRHFVVYVSENRSRYIVP 60
           MAVVKQIMKRCS LR+ KN  N    GG GGG  G+IPVDVPK HFVVYVSENRSRYIVP
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGTGEIPVDVPKGHFVVYVSENRSRYIVP 60

Query: 61  LTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML 99
           LT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SLTSML
Sbjct: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104

[Close]

BLAST of Sed0019562 vs. NCBI nr
Match: XP_022962125.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 87/111 (78.38%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 1   MAVVKQIMKRCSSLRTKKNHQN-------GGAGGG-----GDIPVDVPKRHFVVYVSENR 60
           MAVVKQIMKRCS LR+ KN  N       GG GGG     G+IPVDVPK HFVVYVSENR
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENR 60

Query: 61  SRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           SRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SLTSMLR
Sbjct: 61  SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 111

[Close]

BLAST of Sed0019562 vs. NCBI nr
Match: XP_023002557.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 81/95 (85.26%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGA--GGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLT 61
           AVVKQIMKRCSSLR KK HQ GGA  GGGGDIPVDVPK HFVVYV ENRSRYIVP+TFL+
Sbjct: 11  AVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYIVPVTFLS 70

Query: 62  RPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL 95
            PEFQILLQLAEEEFGF+HHMGLTIPC+E+VF SL
Sbjct: 71  TPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 105

[Close]

BLAST of Sed0019562 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 3.6e-37
Identity = 84/99 (84.85%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKN-HQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTR 61
           AVVKQI KRCSSLR  KN + +   GGG +IPVDVPK HFVVYVSENRSRYIVPLTFLTR
Sbjct: 11  AVVKQIKKRCSSLRINKNKNTHLQCGGGDEIPVDVPKGHFVVYVSENRSRYIVPLTFLTR 70

Query: 62  PEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           PEFQILLQLAEEEFGFNH+MGLTIPCEEQVF SLTSMLR
Sbjct: 71  PEFQILLQLAEEEFGFNHNMGLTIPCEEQVFQSLTSMLR 109

[Close]

BLAST of Sed0019562 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-30
Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           A++KQI+KRCSSL  K    NGG      +P+DVPK HF VYV ENRSRYIVP++FLT P
Sbjct: 14  AMLKQILKRCSSLGKK----NGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHP 73

Query: 62  EFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           EFQ LLQ AEEEFGF+H MGLTIPC+E VF +LTSM+R
Sbjct: 74  EFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Sed0019562 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-27
Identity = 61/98 (62.24%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           A +KQI+KRCSSLR  KN          D+P DVPK HF VYV  NRSRYIVP+++L   
Sbjct: 15  ASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPISWLHHS 74

Query: 62  EFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           EFQ LL+LAEEEFGF+H MGLTIPC+E  F SL SM R
Sbjct: 75  EFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of Sed0019562 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.9e-22
Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 4   VKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEF 63
           +K+I+K+CSS    KN+ + G      +P DVPK HFVVYV E R+RYIVP++ L  P F
Sbjct: 16  IKKIIKKCSSF--GKNNDDSG------LPNDVPKGHFVVYVGERRNRYIVPISCLDHPTF 75

Query: 64  QILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML 99
           Q LLQ +EEEFGFNH MG+ IPC+E  FLS  SM+
Sbjct: 76  QDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of Sed0019562 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.5e-14
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 33 VDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVF 92
          V+VPK + VVYV +   R+++P+++L +P FQ LL  AEEEFG++H M GLTIPC+E  F
Sbjct: 23 VEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEF 82

Query: 93 LSLTSML 99
          L++TS L
Sbjct: 83 LTVTSHL 89

[Close]

BLAST of Sed0019562 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 34 DVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFL 93
          D PK +  VYV E   R+++P+++L +P FQ LL  AEEEFG++H M GLTIPC E VF 
Sbjct: 16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 94 SLTSML 99
           +TS L
Sbjct: 76 CITSCL 81

[Close]

BLAST of Sed0019562 vs. ExPASy TrEMBL
Match: A0A6J1K8F3 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.6e-38
Identity = 86/104 (82.69%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MAVVKQIMKRCSSLRTKKNHQN----GGAGGG--GDIPVDVPKRHFVVYVSENRSRYIVP 60
           MAVVKQIMKRCS LR+ KN  N    GG GGG  G+IPVDVPK HFVVYVSENRSRYIVP
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGTGEIPVDVPKGHFVVYVSENRSRYIVP 60

Query: 61  LTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML 99
           LT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SLTSML
Sbjct: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104

[Close]

BLAST of Sed0019562 vs. ExPASy TrEMBL
Match: A0A6J1HE76 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111462673 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.1e-38
Identity = 87/111 (78.38%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 1   MAVVKQIMKRCSSLRTKKNHQN-------GGAGGG-----GDIPVDVPKRHFVVYVSENR 60
           MAVVKQIMKRCS LR+ KN  N       GG GGG     G+IPVDVPK HFVVYVSENR
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENR 60

Query: 61  SRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           SRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SLTSMLR
Sbjct: 61  SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 111

[Close]

BLAST of Sed0019562 vs. ExPASy TrEMBL
Match: A0A6J1KJU9 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 81/95 (85.26%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGA--GGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLT 61
           AVVKQIMKRCSSLR KK HQ GGA  GGGGDIPVDVPK HFVVYV ENRSRYIVP+TFL+
Sbjct: 11  AVVKQIMKRCSSLRNKKTHQCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYIVPVTFLS 70

Query: 62  RPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL 95
            PEFQILLQLAEEEFGF+HHMGLTIPC+E+VF SL
Sbjct: 71  TPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 105

[Close]

BLAST of Sed0019562 vs. ExPASy TrEMBL
Match: A0A6J1GIF7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111454508 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.9e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           AVVKQIMKRCSSLR KK HQ GGA GGGDIPVDVPK HFVVYV ENRSRYIVP+TFL+ P
Sbjct: 11  AVVKQIMKRCSSLRNKKTHQCGGA-GGGDIPVDVPKGHFVVYVGENRSRYIVPVTFLSTP 70

Query: 62  EFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL 95
           EFQILLQLAEEEFGF+HHMGLTIPC+E+VF SL
Sbjct: 71  EFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 102

[Close]

BLAST of Sed0019562 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.8e-37
Identity = 83/105 (79.05%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGG-------AGGGGDIPVDVPKRHFVVYVSENRSRYIVP 61
           AVVKQI KRCSSLR  K ++N          GGG +IPVDVPK HFVVYVSENRSRYIVP
Sbjct: 11  AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSENRSRYIVP 70

Query: 62  LTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           LTFLTRPEFQILLQLAEEEFGF+H+MGLTIPCEEQVF SLTSMLR
Sbjct: 71  LTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 115

[Close]

BLAST of Sed0019562 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-32
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           A++KQI+KRCSSL  K+++  G    G   P++VPK HFVVYV ENR RY+VP++FLTRP
Sbjct: 13  AMIKQILKRCSSLGKKQSNVYGEDENGS--PLNVPKGHFVVYVGENRVRYVVPISFLTRP 72

Query: 62  EFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           EFQ+LLQ AEEEFGF+H MGLTIPCEE VF SLTSMLR
Sbjct: 73  EFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of Sed0019562 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 132.1 bits (331), Expect = 2.4e-31
Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           A++KQI+KRCSSL  K    NGG      +P+DVPK HF VYV ENRSRYIVP++FLT P
Sbjct: 14  AMLKQILKRCSSLGKK----NGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHP 73

Query: 62  EFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR 100
           EFQ LLQ AEEEFGF+H MGLTIPC+E VF +LTSM+R
Sbjct: 74  EFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Sed0019562 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.1 bits (318), Expect = 7.9e-30
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           A++KQI+KRCSSL   + +   G      +PVDVPK HF VYV E RSRYIVP++FLT P
Sbjct: 13  AMLKQILKRCSSLAKNQCYDEDG------LPVDVPKGHFPVYVGEKRSRYIVPISFLTHP 72

Query: 62  EFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML 99
           +F+ LLQ AEEEFGFNH MGLTIPCEE VF SLTSM+
Sbjct: 73  KFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of Sed0019562 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-29
Identity = 65/99 (65.66%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 2   AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRP 61
           A++KQI+KRCSSL  K+ +   G      +P+DVPK HF VYV E R+RYIVP++FLT P
Sbjct: 13  AMLKQILKRCSSLGKKQCYDEEG------LPLDVPKGHFPVYVGEKRTRYIVPISFLTHP 72

Query: 62  EFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSMLR 100
           EF ILLQ AEEEFGF H M GLTIPCEE VFLSLTSM+R
Sbjct: 73  EFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of Sed0019562 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-29
Identity = 62/100 (62.00%), Postives = 79/100 (79.00%), Query Frame = 0


Query: 3   VVKQIMKRCSSLRTKKN--HQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTR 62
           ++KQI+KRCSSL  K++  + +     G  +P+DVPK HFVVYV  NR RY++P++FLTR
Sbjct: 14  MIKQILKRCSSLGKKQSSEYNDTHEHDGDSLPLDVPKGHFVVYVGGNRVRYVLPISFLTR 73

Query: 63  PEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL-TSMLR 100
           PEFQ+LLQ AEEEFGF+H+MGLTIPCEE  F SL TSML+
Sbjct: 74  PEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSMLQ 113

The following BLAST results are available for this feature:

BLAST of Sed0019562 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598492.1	4.3e-38	82.86	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997035.1	9.6e-38	82.69	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_022962125.1	1.3e-37	78.38	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]
XP_023002557.1	2.8e-37	85.26	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_038886317.1	3.6e-37	84.85	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of Sed0019562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	3.4e-30	67.35	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	7.9e-27	62.24	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	5.9e-22	55.79	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33080	3.5e-14	53.73	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	1.3e-13	53.03	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Sed0019562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8F3	4.6e-38	82.69	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083...	[more]
A0A6J1HE76	6.1e-38	78.38	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A6J1KJU9	1.4e-37	85.26	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367...	[more]
A0A6J1GIF7	3.9e-37	86.02	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114545...	[more]
A0A0A0LRM7	8.8e-37	79.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1	[more]

BLAST of Sed0019562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75580.1	2.2e-32	68.37	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	2.4e-31	67.35	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	7.9e-30	64.95	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	1.7e-29	65.66	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	3.9e-29	62.00	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 22..98 e-value: 3.5E-24 score: 84.8
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 2..99
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 2..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019562.1	Sed0019562.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin