Sed0019531 (gene) Chayote v1

Overview


Name	Sed0019531
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG05: 24813832 .. 24823607 (-)
RNA-Seq Expression	Sed0019531
Synteny	Sed0019531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTCGGCAATTTCCTCGCCCAGGTTCATTTCTATCCTTTAATGGCGTTCGCTGTGTTTGTGTGTGCGTGAATTGGAGGGGAAATGGGGGTTTCTGCTTTTCAAGCTATTGGGTTTTGTGTATGCCTGTTTCTGCTTCTAGGGTTTCGGTAATTTCTTCGTTTTGGGGTTTATTCTCTTCAATCTGACGGCGTTTGAGAGCTTTTCTTTTGTTGCGTTGGTTTTGGATTTGTGCTGATTTAAATTCCTTAATTGAGATTAAAAAATGAATGCTCTGTTGTAACCTGGATTTAGTAGAGAAGAGTCCAGTCGAGTGGAAGGGTTGATGGTAGTTGGGATAATCTATTACTTGTTTGGGGATTGAGCTAATTCACTACTCTGTGTGGGGATAGTGGTTGAGTAATAACTAATAAGTTTGATGGATGGTTAATGGTGGTTGTAATAAGATAAACCAAGTTTTAATAGGAACTTGGAACCTCCCATTTTCAAGAAAATTCTTGCACTAATATTTGGATACCAATTCACTAAATATTACTTCCTATTATAACCCGAATAACCGAATTAACTCTCTAACTAGTTGTCCATATGTCCCTCATAATATTCCCAATCCTTCTAAGGTCCCAAACTTAACCGGTTGTTTATCATCAAATACAAACAAGAGGTTCTAGCTGTTTACTACTCTGATTATACCAAAAACAAACACACCCTAGCACTATAGATTGCTATATTTTCGTATGGATACCAATGGTTATAGCTTGGTTTTTGTATGTTTTTTTTTTTTTTTTATAAACTTGTGGTGAAATGTTGCATTTGCAACTGAAATTTTCTTGAATCAATTATGAGATATGCCCATGCATATTCTCTGTTGCTGAGCTCATAAACTTTCTGTATTTGAATACTTAAGAAGATTTCTGCATTTTTGTGTGTTTTACTTTTTCATTGTAGCTTGAGAGAATGGAGACCTTTCTATTTACCTCTGAGTCTGTGAACGAGGGCCACCCAGACAAGCTCTGTGACCAGATCTCGGATGCAGTTCTTGATGCTTGCCTTGTTCAAGACCCCGACAGCAAGGTTGCTTGTGAGACTTGCACCAAGACCAATATGGTTATGGTTTTTGGAGAGATTACAACCAAGGCCGATGTGGACTACGAGAAGATTGTCCGAGATACTTGCCGTTCGATCGGATTCAACTCGGATGATGTGGGTCTTGATGCTGACAACTGCAAGGTCCTAGTCAACATTGAGCAACAGAGTCCTGATATTGCCCAAGGTGTCCATGGCCATTTCACGAAGCGACCTGAGGACATTGGTGCTGGCGACCAGGGTCACATGTTTGGCTATGCCACAGATGAGACCCCAGAACTTATGCCCCTTAGTCATGTTCTTGCAACAAAGCTCGGCGCTCGCCTAACAGAAGTGAGAAAGAATGGTACCTGCCCATGGTTGAGACCGGATGGTAAGACCCAAGTTACTGTGGAGTACTACAATGATAATGGTGCCATGGTCCCTGTTCGAGTCCACACAGTTCTCATCTCCACCCAGCACGACGAAACTGTCACAAATGATGAGATTGCAGCTGACCTTAAGGAGCATGTGATCAAACCTGTCATCCCCAATAAGTACCTTGATGAGAAGACAATCTTCCACCTCAATCCCTCTGGCCGATTTGTCATTGGTGGCCCACACGGAGACGCAGGTCTCACTGGTCGTAAGATCATCATCGATACCTATGGTGGATGGGGAGCTCATGGTGGAGGTGCTTTCTCCGGAAAGGACCCAACCAAAGTAGACAGAAGTGGTGCTTACATTGTCAGGCAGGCTGCCAAGAGCATTGTAGCGAGTGACCTTGCTCGAAGGGCAATTGTGCAGGTCTCTTATGCCATTGGTGTGCCTGAGCCATTGTCAGTCTTCGTCGACACATATGGAACTGGAAAGATCCCGGACAAGGAGATCCTCAAGCTCGTGAAGGAAAACTTTGACTTCAGACCTGGAATGATGACCATTAACCTTGACTTGAAGAGAGGTGGGAATGGGAGATTCCTGAAGACAGCAGCTTATGGACACTTTGGAAGGGATGACCCAGATTTCACTTGGGAAGTTGTGAAGCCCCTAAAGTGGGAGAAACCTCAATCTTGAAATTGGTTATCGGTCTGTTCAGAGCCGCCATGGAAATTGGAAAACCGAGCTTTTTTTAATACTGGATGAATAATGTGTGTGCTGCTGTCCTTTTAATCTTAAGGTAGTAGTTGCCATTGTTGTTCTATTTTTACTTGTGAGATCCTTTTGTTTGTTTTTCTTTCACCCTTTGTTTCTTGTTGCTTATTTTACCTTGATGATGTATCTTTTTGTACCAATTATAATATGGAAGGGGATTCTGTCCAAGTTCAGATTCTTTGTGTGTGTGTGATCCTCTTCTTGTTTTTTTTCACCCTTTGTTTCTTGTTGCTTATTTTACCTTGACGATGTACCTTTTTTCGTTGTGTGTGCGGGTGTGCGCGCGTGTGTGGGCATGTGTGAGTGAGTGCGTGCAGGTGCGTGCGTCTGTGAGTGTGTGCGTGCATGGGCGTGCAGGCGGGCATACACAATAATATTATTATAAATTTATGAAGTTCTTTTGTTCTTTTATTTTTATGATGATATATTATTATAAATTAATTATATTTATATAATTACAGGCCTATACAATAATATTGATAATAATAATAAATATTATTTTTTAAGTTTATAATAACAATAATAAATATTATTTTTTAAGTTTATTATTATGATTATAATGATAATTATTATTGATCGGTTAATAACAATTTACATTTGAATGAACATATTTGTAAACAAATTCGTTAAAATAGTTGAAAACAATTATCGCATAAAAAACATAATTAAATAACTAAATAAAATACTAGTCATCTTCTTTCACTTTGATTTTTAGTAATCTTTGATGCTCTTTAAAAAATATTTTTATCACCATGTTACAAATGATGTATACCAAAATTAGTTTTAAAAATTAAATCATATGATAATAAGATAGAATGACAATCTTTTTCAATGAGTAATATGAATAACAACGATTGTAGTTGAAGATTTCTTAAAGAGTGTTGTCAACAATTATAAAATGACATAATTATATAGTAAAAATAAACAAGTTATAAGAAAAAATATTAACAAATAAAAGTTATAAATTAAACAAGAATAAACCATTTAGATTTAATAAATAAAATAAAATAGCAACACATGGTTACTTCGGAGGTAAAATGGTTGATGTTAAAATGAATAAAAATCCATATTTAAGGGGAAAGAAGATGAAAAAAAGGTTGAGAGAATAATAATGACAAAAGTAAAGGGTCATGATAAGAATTTATTACATTTTGAAACTCATACTAAAATTTAAGTGAAGGGATGGAATGACACGGAAAAATAGATGGTTTTTAAATACGGTGAACCAAACACTGGTTTGAATTTGGATTCTAAACCAATCCAAATCCAACTAGTGAACAAAACATGACCTTAGTATCTCAAGACCCTTGTTACCATTAGGGCACTCCATGATAATTAAAAATTAGTGATTATAAATAAGGAGTTATTTTAAATAGTTGAAAATGAATGATTAGAAATGAGTGGTTAGAAATGATGAGTTATTTTTAGTAATAAAAATGAGTAGTTATTTTGAGTAGTTATAATAACTCGTTTGGATATAACTTTTTAAAAAGTTGTTGGTCGGTTTAAATCCTCCGCAAGTTCAATCAACAAAAACTCCCTAACAATTCATATTCACGTGGGAGTTCTACTTACTACACATTCATGCGTCGTGTGTAAAAGAATTCTATATTTTGCTTATGTGGCACCATTATATAAATTTATATAATTTTAATATTTTTATTTATGAAATAAGTTTCTTTTTTTTTTTGAAATCAAAATAAGTATTGCACTAGCATGTGCACACCCATGCAAAGCTCATTATCCGTATGAAGTAAGCATAGTCAATTGCCTAAGATTTTCCAGTCTGAATGCATTTCTTTACCCAAAAAATTTGTGGGGTGTGATTTACCTGTTCTAAAAATATTCAAAAAAATGTATAGAATCGCATTGAAGGGGCATGAAAGTTCCAAAACAAGGTGATCGGCTATGTAGGAGGCTATGAATCCCGTGAAATGTGCTCGGTGACGTGTTCTAAACAAAATTTTTTAGCAAGAAATTATTAGATATGCTTTACCTTTTTTTTTTAAAAAAAAAATCTAGAAAATTTGATATTAATAAAAAAACTTTAGAGATATTAATGGTTTTACCATAGATTATGTGTCCTCCATTATCTTCAAGAAAATCAAGGATATACTGGCTGATTTTGCAAGAAATAATAGATATGTTTTACTTTTGTTTTTTTTAAAAACAAAATCTGAAAAAATTGGAGAGTAATCAACATTATTAATAGTTTTAAAATAGATTATCACTCCATTATCTTCTGAAAAATTAGGATATAGGGCTGATTTTGTGGAAATCAATTTTCTTGCTAAAAAAGTAATTCATTTTAAAAATAAATAGAGATAAAAAAGGTATTTATGGGATCAAAAGTATTCTCTTGCCTATATTGGTGGAAGAAAAAGATATATTTTAAAAGTTAAAATCGATAGATATCACATGAATTTTATTTGGAAAAATAGACATTCTTTACTATTTGTGAAATTGAGGCTTACCTAGTTTGGGTTGGTGCCTTGTACCCATCAAGAGGAATAAGTTGGGCCTCATAAACAATGTGGGCCACCTGTCCACAAGCCCAAATCTGAACTTCAATAAAATCCCAATCCTGAGCGGTTTCACAAACCCTAAAACGCAGCAAAGAATAGATTTCTTACAGCCTCCGCCATCGCCACTTCTTGAAGGTTTGAAATCTCTCTCTTTCAATGATTCTTTGCAGTGCATTCAATTTCGTATATCGTTTGTGTTATTTCTTCTTCCGTGATTTCGATCGCTTTTGAATGTGCAGTGAACAATGTCGACCGGAGAAATTGCTTGCTCCTATGCTGCTCTCATTCTCTACGACGACAACATCCCTATCACCGTATGCTTCCTCCTTCAATATTTAGTCATTATTTCTAAGTATTTACTCTTTGGATCGTTTACCAATCTAACAGTAATTGGTTGGAATATTATCATGTTCTGTCCTAAGGGCCTGGTGTTAATTTTAGGAATATGAACATTTTTCCAAATTCCCATTTTGGAAAAGAAAAAAAAACCCAAAGTGGAATATGAAGGCCCAGTTGGATAACCATATGCTTTCAAATACTTATTCTGGTTTATGGTATTTGGTTAGGATTGACATGCTTATGTAATTAGAGAAGATGGTAGAGAATTTGAGTAATTAAAAGTTCAAATTTCAAAAACAAAAAACCAAATGGTTATCAAGCGGGTCGATAACGTTTGGTTTTAGGTTCAATTTTATTTATTATACAACAACGGTTGCAATCTGGATACTACTCTTGTTTTCCTTCTATCTATTCTATGTCGTTGATGTGTGTTTTTCAACAGTCAGAGAAGCTTCAGACTCTTGTGAATGCTGCTAAAGTGTCGAATGTGGAGTCTTATTGGTTCAGCCTTTTTGAGAAACTAGCAGAGAAGCGTAACATTGGTGATTTGATCATGAATGTTGGGGCTGGTGGAGGTGCACCCGCTGCGGCTGCTGTCCCTGCTGCTGGTGGGGCTGCCACTGGTGCTGCTGCCGCTCCTCCTCCGGAAGAGAAAAAGGTATATAGCAATGGACCTATTTCGATGATACCCGCTGTCTTTCCTTTCCTGTCACTACATACATGTACATCAATATTGATTGACTATTTATCTTACTTGCAGGAGGAACCTAAGGAGGAGAGTGACGACGATATGGGGTTCAGTTTGTTTGATTAGGTCCATATGGCTTTCCATATTTTCAACTTTCATCATCTTTGAAAAGCTTATAGATATGTAATTGGGATATCCTATTTGCCGGAAGTTTTGATTTTAATTTCATTTCTTGTTTTCTGTTGAGATTTATTTTGTTCTATCTATCTTAGCTTTACTAAGTAAGTAACATTGTTGCTTCTCTACCTTTGTTATCTATTTATGCAACTGCTGTTTGTTTCGATATCTCGTATTCTTTTAGTAGTGCTTCTGAACCTCACTTTCTGTTGGTATGTTATTCTTCCATAAGAAGGGAAAATTTTGGACTCCTTAGAATATCTTGTAACAAATACGAGCTTTTGACGAAGGAATATGGGGGGAGAGGAATTTGATTGTGAAGTAGAAAACTCTATGATCAGTAGAAATCCAAGTTCATGTATGCAGGAACTGAAAAGATTGTAAGTTGAGGTCATGCCAGGCGACTACATTTTATTTTCTTTAAACTAACATAATAAAATTAAATAAAGAACAATGAAATGTGGTGACATAGTTGGACATGAAAAGATACGTTATGCTAGGACTTCAAACTTTTTTCAATCAAGAATGTTTAAGGCTATGTTTGTTTTTGCATAGTGGTTAACAACTAGGCCTATTTGTATTTAGTAGTAAATAACATACTCCAAATTACTTTTAGTCACTCATCAAACCTTCTATCCAATTCCACATAAATCTCATCAAGCTGCAATTAAACCTATTACTCAACCATTACTAATTTCAATATCCAATATTTCTTTGTAAAAACAATTTGAACTCTACTGAAAGTCTAGTAACCTTGTGGTAATGACTAATGCACATGGTAAAGTCAAGAATAATTGTACTTAAGAGTTGCTTTTGTAATGTTTCCTTTTTCTTCAACCCTCTGGTTTTGCTTGCTGGTTTTATTTCAGAAACTCAGAAAATCTACTCTTTTTCTTTCTATATTAACTTTTCTTATTTGTCGGCAACCTCTTTACCGAGGCCTCTGTTTGCCTTTTATTTTTTGCTCTAATTTTACCTTCGAAAACTTATCTACACATAGATAAGTAGGTAGTCCATGCTTAATGCGTATGTGGCATCATGTAAGCCACACAATTTTGTTTTATATACATAAATTAATTTTTGATTAAAAATTATGTGGCTCACATGATGCCACATATCCATTAAGTATGGACTACCTGCTTTAATTTTTGATTAAAAATTATGTGGCTCACATGATGCCACATATCCATTAAGCATGAACTACTTATTTGTTCATGTGTAGGCAAGTTTTTCTCAAAATAGAATCCAGTCAAATCTCAAAATGAGTTGTGCAAGCGCTTGTTGGTTAATTGACCCTTTGACGAGCAAGTGCTTCGTTGGTGGTTGCATATAGACCTTGGAGTGCTCCTCTCGGAGCTTGAAGGGTGGGTTTTCTGAGAAAATTAGAGTTTTGAGTTGTCCCATTCACGAATATCCTTGTTTCAAAAAAAATAAAAATGAAAGACTAGTTCCACTCGACTGATGAAGAACATCAACCAGAGTTGTCATATTTAAGGACGATTTACTAACTCATCTTCGAAAACTTACATCTAAACGGGTTTTTATTAACTTATTTTCATTTTTTACTTTTAAAAATAATTCTCATTTTTAACCATTTATTTGTAACTGTAACTACTCAGTCATTTCTAACAACTCATTTTTAATCATTCATTTCAAATAAATCATTTTTAACTATTCATTTATTATTATTATTTTTTAACTACTCATTTTAAATTTACAATCAAACAATGTTTTGACTTTAAGTCTCCTATACAAAAATCACATCCAAACAAGTTTTTAACTACAACTTTCAATTTTTAACTACTCAAAAGAATTTATCAATAAAACTAAATACATTAAACAAAAAACCCCATGGGTGGTGAGGCATCAAAACTAAGGAAAGAGCCAGGAAGGATGTCTATGCCTTTTGATAGGGGAAACCAACAACTGGTTTGAGGTTCGGGAAGAAGAGAAGTAGCTGGTTTGGAGGAGAAAGGAAAAGGGATGGAGAGAGTTGCCAAGTTTTCAGTGTTATGTTTTCGACGAGATACGTATCTTGGCTCGTTGACTCATTCTATCACTCTGGGTGGCTCAACAGAAAGAAAGTTGGATCACTTGGATTTTGCATGTATAGCAAAATAGTTTTATTAGTGATAGAATTCAATCAATAATAGACTCATTCTTCTTTAAGTGATAGAAATCTAAATTGAGTTTTATCAATGTGTTATGGATGAACTATTTTAAAAAATTTGCTGCAAATATAATACAACAGGTAGAATGTGCTGCTGATAGTAAATTCTCTACTTTAAAACCTCGAATCAACGGTTGTAAACTAAAAAAATAGTTCTTGAAAACTTATTTTATAAATTTAGCTGATTTCATATTTTTTTTAATATGCTAGCAAACAACTAAAAAATTTAAAATTGATCAATTGAAGTATTAATTAATTAATTTTTTCTTTTTTTTAAAAAATAATTATTGTTCAAACTGTGCTTCACTTCTGAGTTTGATGCATAAGTAGGGCAGATCGAAACTACTAGTATTTTGGTCAAGAGTACAAATACTAACCAGTTCTGGTTAACCTAATTTTGGATGCTTAGAAAAAAAAAAAAAAAAACCTTATTTTAGATAAAGCTCATCAAGATCAATGTTTACACCAATTGATATAATTGTTAAAATTCATCAAATAAGGACATTTCTAAACTTCTATCATGCCTTATTTGTCACCAGTGCCCTCACTTGTCAATTAATACAGCCTGTGAAAAACATCAGCTCTAAACGACAACTAAAAAGATACTAATCATTCACAAGATTAGTATTCTAATCAACAAATGAAATCCATAATTGTTCCTTGATTGGTTGTGTGAGATAATGCAGATTGTTGAGTTATAGATATCTCCTCTTCAACCAATAAGAAGAGGATGAAGATCTACCAGGATAGCCTTTGTGGGTCTCACAAGACACTATATAAGAAGATTTCATACTTGTTACAATTCATCAACAACTTCATTCAAAAGCACTTTAAGGACTTACTTCCTTTGAGTTAAAGTGGTAGGCATGGCAGCCATGACTCTCTCATCCACCTTCACTGGAAAAGCAGTTCCTTTGACTGCACCGACCGAGCAGTTTTCCTCGGTTCGCAGCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGGCAGCCCATGGTATGGCCCCGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCTTATCCGCCGACCCCGAGACGTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTATGGGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGACCTTTGGAGAATCTTGCCGATCATCTCGCTGATCCTGTCAACAACAATGCATGGTCTTATGCTACAAACTTTGTACCTGGGAAGTGA

mRNA sequence

TGCTCGGCAATTTCCTCGCCCAGGTTCATTTCTATCCTTTAATGGCGTTCGCTGTGTTTGTGTGTGCGTGAATTGGAGGGGAAATGGGGGTTTCTGCTTTTCAAGCTATTGGGTTTTGTGTATGCCTGTTTCTGCTTCTAGGGTTTCGGTAATTTCTTCGTTTTGGGGTTTATTCTCTTCAATCTGACGGCGTTTGAGAGCTTTTCTTTTGTTGCGTTGGTTTTGGATTTGTGCTGATTTAAATTCCTTAATTGAGATTAAAAAATGAATGCTCTGTTGTAACCTGGATTTAGTAGAGAAGAGTCCAGTCGAGTGGAAGGGTTGATGGTAGTTGGGATAATCTATTACTTGTTTGGGGATTGAGCTAATTCACTACTCTGTGTGGGGATAGTGGTTGAGTAATAACTAATAAGTTTGATGGATGGTTAATGGTGGTTGTAATAAGATAAACCAAGTTTTAATAGGAACTTGGAACCTCCCATTTTCAAGAAAATTCTTGCACTAATATTTGGATACCAATTCACTAAATATTACTTCCTATTATAACCCGAATAACCGAATTAACTCTCTAACTAGTTGTCCATATGTCCCTCATAATATTCCCAATCCTTCTAAGGTCCCAAACTTAACCGGTTGTTTATCATCAAATACAAACAAGAGGTTCTAGCTGTTTACTACTCTGATTATACCAAAAACAAACACACCCTAGCACTATAGATTGCTATATTTTCGTATGGATACCAATGGTTATAGCTTGGTTTTTGTATGTTTTTTTTTTTTTTTTATAAACTTGTGGTGAAATGTTGCATTTGCAACTGAAATTTTCTTGAATCAATTATGAGATATGCCCATGCATATTCTCTGTTGCTGAGCTCATAAACTTTCTGTATTTGAATACTTAAGAAGATTTCTGCATTTTTGTGTGTTTTACTTTTTCATTGTAGCTTGAGAGAATGGAGACCTTTCTATTTACCTCTGAGTCTGTGAACGAGGGCCACCCAGACAAGCTCTGTGACCAGATCTCGGATGCAGTTCTTGATGCTTGCCTTGTTCAAGACCCCGACAGCAAGGTTGCTTGTGAGACTTGCACCAAGACCAATATGGTTATGGTTTTTGGAGAGATTACAACCAAGGCCGATGTGGACTACGAGAAGATTGTCCGAGATACTTGCCGTTCGATCGGATTCAACTCGGATGATGTGGGTCTTGATGCTGACAACTGCAAGGTCCTAGTCAACATTGAGCAACAGAGTCCTGATATTGCCCAAGGTGTCCATGGCCATTTCACGAAGCGACCTGAGGACATTGGTGCTGGCGACCAGGGTCACATGTTTGGCTATGCCACAGATGAGACCCCAGAACTTATGCCCCTTAGTCATGTTCTTGCAACAAAGCTCGGCGCTCGCCTAACAGAAGTGAGAAAGAATGGTACCTGCCCATGGTTGAGACCGGATGGTAAGACCCAAGTTACTGTGGAGTACTACAATGATAATGGCATGGCAGCCATGACTCTCTCATCCACCTTCACTGGAAAAGCAGTTCCTTTGACTGCACCGACCGAGCAGTTTTCCTCGGTTCGCAGCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGGCAGCCCATGGTATGGCCCCGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCTTATCCGCCGACCCCGAGACGTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTATGGGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGACCTTTGGAGAATCTTGCCGATCATCTCGCTGATCCTGTCAACAACAATGCATGGTCTTATGCTACAAACTTTGTACCTGGGAAGTGA

Coding sequence (CDS)

ATGGAGACCTTTCTATTTACCTCTGAGTCTGTGAACGAGGGCCACCCAGACAAGCTCTGTGACCAGATCTCGGATGCAGTTCTTGATGCTTGCCTTGTTCAAGACCCCGACAGCAAGGTTGCTTGTGAGACTTGCACCAAGACCAATATGGTTATGGTTTTTGGAGAGATTACAACCAAGGCCGATGTGGACTACGAGAAGATTGTCCGAGATACTTGCCGTTCGATCGGATTCAACTCGGATGATGTGGGTCTTGATGCTGACAACTGCAAGGTCCTAGTCAACATTGAGCAACAGAGTCCTGATATTGCCCAAGGTGTCCATGGCCATTTCACGAAGCGACCTGAGGACATTGGTGCTGGCGACCAGGGTCACATGTTTGGCTATGCCACAGATGAGACCCCAGAACTTATGCCCCTTAGTCATGTTCTTGCAACAAAGCTCGGCGCTCGCCTAACAGAAGTGAGAAAGAATGGTACCTGCCCATGGTTGAGACCGGATGGTAAGACCCAAGTTACTGTGGAGTACTACAATGATAATGGCATGGCAGCCATGACTCTCTCATCCACCTTCACTGGAAAAGCAGTTCCTTTGACTGCACCGACCGAGCAGTTTTCCTCGGTTCGCAGCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGGCAGCCCATGGTATGGCCCCGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAGGCTTATCCGCCGACCCCGAGACGTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTATGGGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACGCATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGACCTTTGGAGAATCTTGCCGATCATCTCGCTGATCCTGTCAACAACAATGCATGGTCTTATGCTACAAACTTTGTACCTGGGAAGTGA

Protein sequence

METFLFTSESVNEGHPDKLCDQISDAVLDACLVQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRSIGFNSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGMAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

Homology

[Close]

BLAST of Sed0019531 vs. NCBI nr
Match: XP_022998479.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima])

HSP 1 Score: 528.1 bits (1359), Expect = 7.4e-146
Identity = 256/265 (96.60%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGKAVPL APTE FSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. NCBI nr
Match: XP_022948926.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_023524829.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo] >KAG6606914.1 Chlorophyll a-b binding protein 3C, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 527.3 bits (1357), Expect = 1.3e-145
Identity = 256/265 (96.60%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGKAVPL APTE FSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 524.2 bits (1349), Expect = 1.1e-144
Identity = 253/265 (95.47%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGK VPL APTE  SSVRSNGR+SMRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 524.2 bits (1349), Expect = 1.1e-144
Identity = 253/265 (95.47%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGKAVPL APTE  SSVRSNGRVSMR+SGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGE+TDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. NCBI nr
Match: XP_004148579.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532.1 hypothetical protein Csa_001702 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 2.0e-143
Identity = 252/265 (95.09%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGK VPL A TE  SSVRSNGRV+MRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. ExPASy Swiss-Prot
Match: P27492 (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB16 PE=2 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 8.2e-132
Identity = 233/269 (86.62%), Postives = 245/269 (91.08%), Query Frame = 0


Query: 182 MAAMT--LSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPAS--SSGSPWYGPDRVK 241
           MAA T  LSS F GKAV L+  +   S V  NG+V+MRK+   A   SSGSPWYGPDRVK
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSS---SEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVK 60

Query: 242 YLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 301
           YLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 120

Query: 302 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRI 361
           LL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 180

Query: 362 AGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 421
           AGGPLGE+ DP+YPGGSFDPLGLA+DP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 240

Query: 422 GPLENLADHLADPVNNNAWSYATNFVPGK 447
           GPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWSYATNFVPGK 266

[Close]

BLAST of Sed0019531 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.1e-131
Identity = 232/270 (85.93%), Postives = 246/270 (91.11%), Query Frame = 0


Query: 182 MAAMTL---SSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPA--SSSGSPWYGPDRV 241
           MA  T+   SSTF GKAV L+  +   S +  NGRV+MRK+   A  +SSGSPWYGPDRV
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSS---SEITGNGRVTMRKTATKAKPASSGSPWYGPDRV 60

Query: 242 KYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 301
           KYLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 61  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 120

Query: 302 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYR 361
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYR
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 180

Query: 362 IAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 421
           IAGGPLGE+ DP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 422 KGPLENLADHLADPVNNNAWSYATNFVPGK 447
           KGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0019531 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-130
Identity = 225/257 (87.55%), Postives = 237/257 (92.22%), Query Frame = 0


Query: 190 TFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSY 249
           T  G+AV L+    +   ++ N + +MRK+   + SSGSPWYGPDRVKYLGPFSGE PSY
Sbjct: 2   TLAGQAVKLSPNAPE---IQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSY 61

Query: 250 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 309
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA
Sbjct: 62  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 121

Query: 310 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPI 369
           VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGPLGE+TDPI
Sbjct: 122 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPI 181

Query: 370 YPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 429
           YPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD
Sbjct: 182 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 241

Query: 430 PVNNNAWSYATNFVPGK 447
           PVNNNAW+YATNFVPGK
Sbjct: 242 PVNNNAWAYATNFVPGK 255

[Close]

BLAST of Sed0019531 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-130
Identity = 229/270 (84.81%), Postives = 245/270 (90.74%), Query Frame = 0


Query: 182 MAAMTL---SSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPAS--SSGSPWYGPDRV 241
           MAA T+   S +F GKAV L+  +   S +  NG+V+MRK+   A   SSGSPWYGPDRV
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSS---SEITGNGKVTMRKTASKAKTVSSGSPWYGPDRV 60

Query: 242 KYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 301
           KYLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 61  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 120

Query: 302 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYR 361
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYR
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 180

Query: 362 IAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 421
           +AGGPLGE+ DP+YPGGSFDPLGLA+DP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 422 KGPLENLADHLADPVNNNAWSYATNFVPGK 447
           KGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0019531 vs. ExPASy Swiss-Prot
Match: P12470 (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 GN=CABE PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-130
Identity = 231/269 (85.87%), Postives = 244/269 (90.71%), Query Frame = 0


Query: 182 MAAMT--LSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPAS--SSGSPWYGPDRVK 241
           MAA T  LSS F GKAV L+  +   S V  NG+V+MRK+   A   SSGSPWYGPDRVK
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSS---SEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVK 60

Query: 242 YLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 301
           YLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 120

Query: 302 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRI 361
           LL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 180

Query: 362 AGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 421
           AG PLGE+ DP+YPGGSFDPLGLA+DP+AFAELKVKE+KNGRLAMFSMFGFFVQA+VTGK
Sbjct: 181 AGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGK 240

Query: 422 GPLENLADHLADPVNNNAWSYATNFVPGK 447
           GPLENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWSYATNFVPGK 266

[Close]

BLAST of Sed0019531 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 3.6e-146
Identity = 256/265 (96.60%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGKAVPL APTE FSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. ExPASy TrEMBL
Match: A0A6J1GAK0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452433 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 6.1e-146
Identity = 256/265 (96.60%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGKAVPL APTE FSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 5.2e-145
Identity = 253/265 (95.47%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGK VPL APTE  SSVRSNGR+SMRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 5.2e-145
Identity = 253/265 (95.47%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGK VPL APTE  SSVRSNGR+SMRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. ExPASy TrEMBL
Match: A0A0A0LCY3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G664560 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 9.7e-144
Identity = 252/265 (95.09%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 182 MAAMTLSSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAM LSSTFTGK VPL A TE  SSVRSNGRV+MRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGE PSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWSYATNFVPGK 447
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0019531 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 454.1 bits (1167), Expect = 1.3e-127
Identity = 224/269 (83.27%), Postives = 239/269 (88.85%), Query Frame = 0


Query: 182 MAAMTL---SSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKY 241
           MAA T+   S   TGKAV L+      S V   GR++MRK+ KP   SGSPWYG DRVKY
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAA---SEVFGTGRITMRKASKPTGPSGSPWYGSDRVKY 60

Query: 242 LGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 301
           LGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 302 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIA 361
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 362 G-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 421
           G GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 422 GPLENLADHLADPVNNNAWSYATNFVPGK 447
           GPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Sed0019531 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 451.8 bits (1161), Expect = 6.3e-127
Identity = 225/270 (83.33%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 182 MAAMTL---SSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKS-GKPASSSGSPWYGPDRVK 241
           MAA T+   S  F GKAV L+      S V  +GRV+MRK+  KP   SGSPWYG DRVK
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAA---SEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 242 YLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 301
           YLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 302 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRI 361
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 362 AG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 421
           AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 422 KGPLENLADHLADPVNNNAWSYATNFVPGK 447
           KGP+ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0019531 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 451.4 bits (1160), Expect = 8.2e-127
Identity = 225/270 (83.33%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 182 MAAMTL---SSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKS-GKPASSSGSPWYGPDRVK 241
           MAA T+   S  F GKAV L+      S V  +GRV+MRK+  KP   SGSPWYG DRVK
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAA---SEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 242 YLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 301
           YLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 302 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRI 361
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 362 AG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 421
           AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 422 KGPLENLADHLADPVNNNAWSYATNFVPGK 447
           KGP+ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0019531 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 451.4 bits (1160), Expect = 8.2e-127
Identity = 225/270 (83.33%), Postives = 241/270 (89.26%), Query Frame = 0


Query: 182 MAAMTL---SSTFTGKAVPLTAPTEQFSSVRSNGRVSMRKS-GKPASSSGSPWYGPDRVK 241
           MAA T+   S  F GKAV L+      S V  +GRV+MRK+  KP   SGSPWYG DRVK
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAA---SEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 242 YLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 301
           YLGPFSGESPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 302 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRI 361
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 362 AG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 421
           AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 422 KGPLENLADHLADPVNNNAWSYATNFVPGK 447
           KGP+ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0019531 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 448.4 bits (1152), Expect = 6.9e-126
Identity = 224/267 (83.90%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 183 AAMTLSS-TFTGKAVPLTAPTEQFSSVRSNGRVSMRKS-GKPASSSGSPWYGPDRVKYLG 242
           + M LSS  F GKAV   A     S V  +GRV+MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVKPAA-----SDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 243 PFSGESPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 302
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 303 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAG- 362
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWSYATNFVPGK 447
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Sed0019531 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998479.1	7.4e-146	96.60	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima]	[more]
XP_022948926.1	1.3e-145	96.60	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02...	[more]
XP_008447450.1	1.1e-144	95.47	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_038903667.1	1.1e-144	95.47	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_004148579.1	2.0e-143	95.09	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532...	[more]

BLAST of Sed0019531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27492	8.2e-132	86.62	Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07369	1.1e-131	85.93	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P08221	1.2e-130	87.55	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P27495	1.2e-130	84.81	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P12470	1.2e-130	85.87	Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia OX...	[more]

BLAST of Sed0019531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEF6	3.6e-146	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GAK0	6.1e-146	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3DAB9	5.2e-145	95.47	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BHH5	5.2e-145	95.47	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LCY3	9.7e-144	95.09	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of Sed0019531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	1.3e-127	83.27	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	6.3e-127	83.33	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	8.2e-127	83.33	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	8.2e-127	83.33	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	6.9e-126	83.90	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.300.10		coord: 13..112 e-value: 5.8E-44 score: 150.7
None	No IPR available	GENE3D	3.30.300.10		coord: 119..195 e-value: 9.3E-27 score: 95.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..226
None	No IPR available	PANTHER	PTHR21649:SF97	CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC	coord: 183..446
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 229..443
IPR022628	S-adenosylmethionine synthetase, N-terminal	PFAM	PF00438	S-AdoMet_synt_N	coord: 4..101 e-value: 3.1E-42 score: 143.3
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 247..412 e-value: 2.2E-48 score: 164.8
IPR022629	S-adenosylmethionine synthetase, central domain	PFAM	PF02772	S-AdoMet_synt_M	coord: 118..179 e-value: 1.9E-27 score: 95.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 237..439 e-value: 1.9E-89 score: 300.9
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 183..446
IPR022631	S-adenosylmethionine synthetase, conserved site	PROSITE	PS00376	ADOMET_SYNTHASE_1	coord: 119..129
IPR022636	S-adenosylmethionine synthetase superfamily	SUPERFAMILY	55973	S-adenosylmethionine synthetase	coord: 3..109
IPR022636	S-adenosylmethionine synthetase superfamily	SUPERFAMILY	55973	S-adenosylmethionine synthetase	coord: 115..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019531.1	Sed0019531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0006556	S-adenosylmethionine biosynthetic process
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004478	methionine adenosyltransferase activity