Sed0019530 (gene) Chayote v1

Overview


Name	Sed0019530
Type	gene
Organism	Sechium edule (Chayote v1)
Description	(S)-2-hydroxy-acid oxidase
Location	LG10: 767974 .. 771655 (+)
RNA-Seq Expression	Sed0019530
Synteny	Sed0019530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCAAGTATAAAATTGATATCTTACATAATCGATGTGCGTATAAGTTGATACCAACACTCGTTATTAAAAAAAATACTTAATTTAAATTTGAATGAAAAAAATTCAATCATCAAGATGAATTTATGCAATGGCCAATGGAGAAAAAAGAACTATACTTATTTGGGCTAATTTGCACTTCCATCCCAACATGAACATTATTTTCATCTAAATGATATTGTTGTTTCAATGCAGGGGAGTTAGCAACAGCCAGAGCAGCATCTGCAGCAAGCTCAATTATGGTTTTTTTTCTTTCCCAATCCTAAAGTTTTATGATTCACTAAAATATTTAGTACACATTATTGACTTGAATTATAAAGTGTTAGATTTGTTAAGGACTTTATTTCTATAATTGATTCAAAGTGATTCTTGAATTGTTTCAGACCCTTTCCACGTGGGCTACTTCCAGTGTGGAAGAAGTTGCTTCCACTGGACCTGGCATTCGATTCTTCCAGCTATACGTAAGAACAATTTCTAAAGAGTTTTCAAGAATAATTTATTGTGGAAGAAACAACTTCGATGTCTCTCGGTGTCTGGCCTAGGGACGGACGTGTCCTGTTATAGTGGAGTGAAGTTCCAATTTCCTGGTTTCTAAAAAAACAAACATTTTCTTAATGTGTTTCACCGAATTCGTATGATCGTGATACGATCCGGACCTTGGAGTTTTGGGAATATTAGTATTAGTATTTATTATTTATTAGTTAATTGCTATTTTAATTGTATTGGGCTTGGGCCTATTATTAGTCTTTTATTTAATTAGGGTTTAGGGTTATAAATAGGGGATGATAGGTCTTTGTTAATGAGCTATTGAATTGTCGTCATTGTACTTTGGCTATTTGAGAGATCCTCTAGAGAGATTATCGTAGTTTAATAATATTTTGTGGTAGATTCTATCATTTTGGTATCAGAGCCGTTTGCCGATCCGGGAATGGTTACTACTAAGATGGAAACAAGGATGCTTGAGTGTGAAGAAAGAACGACCGACTTGGCGAGGAAGTTACAGGAGACGAACACAAAGATGGAATTGATGGAGGAACGATTGGGAAGAAAGATAGATTTGCAGGATTTGAAGTTCGAGAGCATAAACCGGAAGCTAGAACTATTAATGGAGTCATTCCGAGCTTACAAAGGGAAGGGTTTAATGATCGAGGCCTCGGAGGTGGTGTGGCGGCTAGGGTTTTTACACCGCCGCCGCCACCACCGCCATCGCCGCCGCCACCTCCGACATCGTTGCGCCACCTCGCCGTCATCGCCGTGTCGTCACCACCTCTGCCACCACCATCGCGCCGCCACCTCCGATCATCGCCGCCACCACCACCACTCCGCGCCGCCGCCACCACCACCGCCGTCGTTTCCACCATGATGCCACCGACGCTGTCGTTTCCTTCAAAGACAGCGACGCGCCAACGCCACACCGCCCAAGTTCTTTGCCGGCCGGAAAAAAAAATGATAGAGGATGTTGATGTGACAGACTTTTCGCCAGAAGACGGAGCTGCAGAAGATGGCATCGGAGATGGAACACCTTGAGGACAAGGTGGCTCTTGGGGGGGAAAGTATTGATACGATCCGGACCTTGGAGTTTTGGGAATATTAGTATTAGTATTTATTATTTATTAGTTAATTGCTATTTTAATTGTATTGGGCTTGGGCCTATTATTAGTCTTTTATTTAATTAGGGTTTAGGGTTATAAATAGGGGATGATAGGTCTTTGTTAATGAGCTATTGAATTGTCGTCATTGTACTTTGGCTCTTTGAGAGATCCTCTCGAGAGATTATCATAGTTTAATAATATTTTGTGGTAGATTCTATCATTTGAAACGACTCTGATACCAATTGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATAACTATTCAATAATTTGGATGCCTAAACTCTAACCTAATCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGCCCTAGGCCCAACCTTATCAATACCCGCCCTTTAAAGCACCTTGTCCTCAAGGTGAGCTTAAACAAAAATAGAATTTTTTTTTTTCCGGCGGCAGTGCGTGCCGCACGTGATGGTGGAGGCGTGATGTGAGGTGGTGGCGATGATGCGATGAGCGGCAACACCGGTGGTGGTGGCGGCGCGGCGTGTCGGAGGTGGTGACGGTGGAGATGGCGGCGACGATGTTAGAAGTGGTGGCGGTGATGGTGGTGGCGGAGGTGGTGACGGCGGCGGCAGCAACGCCGCAGGTGGGGTTGGTGATGGTGGCGGAGGTAGGGGCAACGGCGGCAGCAACGGCGGTGGCGGAGGCAGAGGCAGAAGCGGCAACGGAGGAGGCGGTGGTGGCGGGGTCAAAACCCTAGCCGTCATTGTTTTTTCCAATCTAATTGCCTCCCTAAAACATTGTTTTAGGTCATTGAAACTCTCCTTTAGGTCTTCTCTGAATTCTTTTTTATGAGAAGAAATCATGACCCTCAAACTTTGCAACTCTTCTAGAATGAAACGAATTTGTTGTTCTTGATTCATCTCTACAACCAAGAATCGAAACGGCTCTGATACCAATTGATAAGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATAACTATTCAATAATTTGGATGCCTAAACTCTAACCTAATCCACTCTATTTATAACAAAATACTAACTAATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGCCCTAGGCCCAACCTTATAAGATCGCTTATCCAGATGTACAAGGATGGACTGGATAAAAATGCAGTGGTACAACTAGTGACAAGAGTAGAAAAGGCTGGTTTCAAAGCCATTGCTCTGACTGTCGACATACCGAGGCGCGGTCACAAAGAAGATGATGTCAAGAACAGGTGTGTTTGGATTAAGTTCGTTGATATAGGTTGAGATATAATCATCATGAAGTGGCCTAATAGTTAAGAAAGACCTTAACTAAGAGGTGATAGAGTTTAATTCACGTGGATTGGAAACAGGAATTAATCTCCTACGGATTTCCTTAACCTCTGAATATTGTAGAGTCAGACGGTATGTCATGTGAAAATAGTCGAAGTGAGCGTAAGCGAGCTTTGATTGATGGCTTTTTGATGCAGGTTTGCTTTGCCACCACCTTTGACATTGAAGAACTTTGAGGGATTGAATCTTGCCAAAATGGATGAGGTAAGAATGAAATGCCACTCTATGCTGAGTTCTACTTTCGTTTGACAATGTTCTTGATAACATTTTCGTTTCTTGTGAAGGTGTTTTTCGTATGACTCTGCACTCGCTTGTCGCGGGGCAGATCGACCGTACTCTCAGTTGGCAGGTAACAAAAAAGGATCTTTCCCAAAGACAATGCTATTGTTATTATTTTGAAACAAACAAAATAATATCATTGTAAAAACTTCTTGTTACATTTACTTACAGGATGTGAAGTGGCTCTAG

mRNA sequence

ATGAACCCAAGGGAGTTAGCAACAGCCAGAGCAGCATCTGCAGCAAGCTCAATTATGACCCTTTCCACGTGGGCTACTTCCAGTGTGGAAGAAGTTGCTTCCACTGGACCTGGCATTCGATTCTTCCAGCTATACATGTACAAGGATGGACTGGATAAAAATGCAGTGGTACAACTAGTGACAAGAGTAGAAAAGGCTGGTTTCAAAGCCATTGCTCTGACTGTCGACATACCGAGGCGCGGTCACAAAGAAGATGATGTCAAGAACAGGTTTGCTTTGCCACCACCTTTGACATTGAAGAACTTTGAGGGATTGAATCTTGCCAAAATGGATGAGATCGACCGTACTCTCAGTTGGCAGGATGTGAAGTGGCTCTAG

Coding sequence (CDS)

ATGAACCCAAGGGAGTTAGCAACAGCCAGAGCAGCATCTGCAGCAAGCTCAATTATGACCCTTTCCACGTGGGCTACTTCCAGTGTGGAAGAAGTTGCTTCCACTGGACCTGGCATTCGATTCTTCCAGCTATACATGTACAAGGATGGACTGGATAAAAATGCAGTGGTACAACTAGTGACAAGAGTAGAAAAGGCTGGTTTCAAAGCCATTGCTCTGACTGTCGACATACCGAGGCGCGGTCACAAAGAAGATGATGTCAAGAACAGGTTTGCTTTGCCACCACCTTTGACATTGAAGAACTTTGAGGGATTGAATCTTGCCAAAATGGATGAGATCGACCGTACTCTCAGTTGGCAGGATGTGAAGTGGCTCTAG

Protein sequence

MNPRELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVEKAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDEIDRTLSWQDVKWL

Homology

[Close]

BLAST of Sed0019530 vs. NCBI nr
Match: XP_020091925.1 (peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like isoform X1 [Ananas comosus] >XP_020091926.1 peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like isoform X1 [Ananas comosus])

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42
Identity = 97/134 (72.39%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           KAGFKAIALTVD PR G +EDD+KNRF LPP LTLKNFEGLNL KMD             
Sbjct: 149 KAGFKAIALTVDTPRLGRREDDIKNRFTLPPFLTLKNFEGLNLGKMDKANDSGLASYVAG 208

Query: 125 EIDRTLSWQDVKWL 126
           +IDR+LSW+DVKWL
Sbjct: 209 QIDRSLSWKDVKWL 219

[Close]

BLAST of Sed0019530 vs. NCBI nr
Match: XP_020091927.1 (peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like isoform X2 [Ananas comosus])

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42
Identity = 97/134 (72.39%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 82  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 141

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           KAGFKAIALTVD PR G +EDD+KNRF LPP LTLKNFEGLNL KMD             
Sbjct: 142 KAGFKAIALTVDTPRLGRREDDIKNRFTLPPFLTLKNFEGLNLGKMDKANDSGLASYVAG 201

Query: 125 EIDRTLSWQDVKWL 126
           +IDR+LSW+DVKWL
Sbjct: 202 QIDRSLSWKDVKWL 212

[Close]

BLAST of Sed0019530 vs. NCBI nr
Match: XP_024633287.1 (peroxisomal (S)-2-hydroxy-acid oxidase isoform X1 [Medicago truncatula] >KEH38401.1 peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Medicago truncatula] >RHN74676.1 putative (S)-2-hydroxy-acid oxidase [Medicago truncatula])

HSP 1 Score: 181.0 bits (458), Expect = 6.2e-42
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGLNL KMDE            
Sbjct: 150 KAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLNLGKMDEANDSGLASYVAG 209

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DVKWL
Sbjct: 210 QIDRTLSWKDVKWL 220

[Close]

BLAST of Sed0019530 vs. NCBI nr
Match: XP_024633288.1 (peroxisomal (S)-2-hydroxy-acid oxidase isoform X2 [Medicago truncatula])

HSP 1 Score: 181.0 bits (458), Expect = 6.2e-42
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 82  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 141

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGLNL KMDE            
Sbjct: 142 KAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLNLGKMDEANDSGLASYVAG 201

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DVKWL
Sbjct: 202 QIDRTLSWKDVKWL 212

[Close]

BLAST of Sed0019530 vs. NCBI nr
Match: PNY16631.1 (peroxisomal (S)-2-hydroxy-acid oxidase glo1, partial [Trifolium pratense])

HSP 1 Score: 180.6 bits (457), Expect = 8.1e-42
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 150 KAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLDLGKMDEANDSGLSSYVAG 209

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSWQDVKWL
Sbjct: 210 QIDRTLSWQDVKWL 220

[Close]

BLAST of Sed0019530 vs. ExPASy Swiss-Prot
Match: B8AKX6 (Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Oryza sativa subsp. indica OX=39946 GN=GLO1 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-43
Identity = 95/134 (70.90%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVEQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+LA+MD             
Sbjct: 150 RAGFKAIALTVDTPRLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGLASYVAG 209

Query: 125 EIDRTLSWQDVKWL 126
           +IDRTLSW+DVKWL
Sbjct: 210 QIDRTLSWKDVKWL 220

[Close]

BLAST of Sed0019530 vs. ExPASy Swiss-Prot
Match: Q10CE4 (Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLO1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-43
Identity = 95/134 (70.90%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVEQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+LA+MD             
Sbjct: 150 RAGFKAIALTVDTPRLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGLASYVAG 209

Query: 125 EIDRTLSWQDVKWL 126
           +IDRTLSW+DVKWL
Sbjct: 210 QIDRTLSWKDVKWL 220

[Close]

BLAST of Sed0019530 vs. ExPASy Swiss-Prot
Match: Q9LRR9 ((S)-2-hydroxy-acid oxidase GLO1 OS=Arabidopsis thaliana OX=3702 GN=GLO1 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.5e-43
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRNVVEQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 149 RAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 208

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DV+WL
Sbjct: 209 QIDRTLSWKDVQWL 219

[Close]

BLAST of Sed0019530 vs. ExPASy Swiss-Prot
Match: Q9LRS0 ((S)-2-hydroxy-acid oxidase GLO2 OS=Arabidopsis thaliana OX=3702 GN=GLO2 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-42
Identity = 93/134 (69.40%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++  V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRKVVEQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 149 KAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 208

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+D++WL
Sbjct: 209 QIDRTLSWKDIQWL 219

[Close]

BLAST of Sed0019530 vs. ExPASy Swiss-Prot
Match: B8B7C5 (Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp. indica OX=39946 GN=GLO5 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-42
Identity = 94/134 (70.15%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+  V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRRVVEQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL L KMD             
Sbjct: 150 RAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVAG 209

Query: 125 EIDRTLSWQDVKWL 126
           +IDRTLSW+DVKWL
Sbjct: 210 QIDRTLSWKDVKWL 220

[Close]

BLAST of Sed0019530 vs. ExPASy TrEMBL
Match: A0A6P5FF95 ((S)-2-hydroxy-acid oxidase OS=Ananas comosus OX=4615 GN=LOC109712646 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42
Identity = 97/134 (72.39%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           KAGFKAIALTVD PR G +EDD+KNRF LPP LTLKNFEGLNL KMD             
Sbjct: 149 KAGFKAIALTVDTPRLGRREDDIKNRFTLPPFLTLKNFEGLNLGKMDKANDSGLASYVAG 208

Query: 125 EIDRTLSWQDVKWL 126
           +IDR+LSW+DVKWL
Sbjct: 209 QIDRSLSWKDVKWL 219

[Close]

BLAST of Sed0019530 vs. ExPASy TrEMBL
Match: A0A6P5F8J6 ((S)-2-hydroxy-acid oxidase OS=Ananas comosus OX=4615 GN=LOC109712646 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42
Identity = 97/134 (72.39%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 82  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 141

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           KAGFKAIALTVD PR G +EDD+KNRF LPP LTLKNFEGLNL KMD             
Sbjct: 142 KAGFKAIALTVDTPRLGRREDDIKNRFTLPPFLTLKNFEGLNLGKMDKANDSGLASYVAG 201

Query: 125 EIDRTLSWQDVKWL 126
           +IDR+LSW+DVKWL
Sbjct: 202 QIDRSLSWKDVKWL 212

[Close]

BLAST of Sed0019530 vs. ExPASy TrEMBL
Match: A0A072V9Z1 ((S)-2-hydroxy-acid oxidase OS=Medicago truncatula OX=3880 GN=MTR_2g070420 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.0e-42
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGLNL KMDE            
Sbjct: 150 KAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLNLGKMDEANDSGLASYVAG 209

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DVKWL
Sbjct: 210 QIDRTLSWKDVKWL 220

[Close]

BLAST of Sed0019530 vs. ExPASy TrEMBL
Match: A0A2K3PMX8 ((S)-2-hydroxy-acid oxidase (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g013356 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.9e-42
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 90  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 149

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 150 KAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGLDLGKMDEANDSGLSSYVAG 209

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSWQDVKWL
Sbjct: 210 QIDRTLSWQDVKWL 220

[Close]

BLAST of Sed0019530 vs. ExPASy TrEMBL
Match: A0A6J1ISV7 ((S)-2-hydroxy-acid oxidase OS=Cucurbita maxima OX=3661 GN=LOC111478373 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.8e-42
Identity = 97/134 (72.39%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   D+N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---DRNVVAQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMD------------- 124
           KAGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMD             
Sbjct: 149 KAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDQADDSGLASYVAG 208

Query: 125 EIDRTLSWQDVKWL 126
           +IDRTLSWQDVKWL
Sbjct: 209 QIDRTLSWQDVKWL 219

[Close]

BLAST of Sed0019530 vs. TAIR 10
Match: AT3G14420.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 175.3 bits (443), Expect = 3.2e-44
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRNVVEQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 149 RAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 208

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DV+WL
Sbjct: 209 QIDRTLSWKDVQWL 219

[Close]

BLAST of Sed0019530 vs. TAIR 10
Match: AT3G14420.3 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 175.3 bits (443), Expect = 3.2e-44
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRNVVEQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 149 RAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 208

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DV+WL
Sbjct: 209 QIDRTLSWKDVQWL 219

[Close]

BLAST of Sed0019530 vs. TAIR 10
Match: AT3G14420.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 175.3 bits (443), Expect = 3.2e-44
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++N V QLV R E
Sbjct: 89  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRNVVEQLVRRAE 148

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 149 RAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 208

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DV+WL
Sbjct: 209 QIDRTLSWKDVQWL 219

[Close]

BLAST of Sed0019530 vs. TAIR 10
Match: AT3G14420.4 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 175.3 bits (443), Expect = 3.2e-44
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++N V QLV R E
Sbjct: 70  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRNVVEQLVRRAE 129

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 130 RAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 189

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DV+WL
Sbjct: 190 QIDRTLSWKDVQWL 200

[Close]

BLAST of Sed0019530 vs. TAIR 10
Match: AT3G14420.5 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 175.3 bits (443), Expect = 3.2e-44
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 5   ELATARAASAASSIMTLSTWATSSVEEVASTGPGIRFFQLYMYKDGLDKNAVVQLVTRVE 64
           E ATARAASAA +IMTLS+WATSSVEEVASTGPGIRFFQLY+YK   ++N V QLV R E
Sbjct: 82  EYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYK---NRNVVEQLVRRAE 141

Query: 65  KAGFKAIALTVDIPRRGHKEDDVKNRFALPPPLTLKNFEGLNLAKMDE------------ 124
           +AGFKAIALTVD PR G +E D+KNRF LPP LTLKNFEGL+L KMDE            
Sbjct: 142 RAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAG 201

Query: 125 -IDRTLSWQDVKWL 126
            IDRTLSW+DV+WL
Sbjct: 202 QIDRTLSWKDVQWL 212

The following BLAST results are available for this feature:

BLAST of Sed0019530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_020091925.1	4.8e-42	72.39	peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like isoform X1 [Ananas comosus] >XP...	[more]
XP_020091927.1	4.8e-42	72.39	peroxisomal (S)-2-hydroxy-acid oxidase GLO1-like isoform X2 [Ananas comosus]	[more]
XP_024633287.1	6.2e-42	73.13	peroxisomal (S)-2-hydroxy-acid oxidase isoform X1 [Medicago truncatula] >KEH3840...	[more]
XP_024633288.1	6.2e-42	73.13	peroxisomal (S)-2-hydroxy-acid oxidase isoform X2 [Medicago truncatula]	[more]
PNY16631.1	8.1e-42	73.13	peroxisomal (S)-2-hydroxy-acid oxidase glo1, partial [Trifolium pratense]	[more]

BLAST of Sed0019530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AKX6	2.0e-43	70.90	Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Oryza sativa subsp. indica OX=399...	[more]
Q10CE4	2.0e-43	70.90	Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9LRR9	4.5e-43	70.15	(S)-2-hydroxy-acid oxidase GLO1 OS=Arabidopsis thaliana OX=3702 GN=GLO1 PE=1 SV=...	[more]
Q9LRS0	1.3e-42	69.40	(S)-2-hydroxy-acid oxidase GLO2 OS=Arabidopsis thaliana OX=3702 GN=GLO2 PE=1 SV=...	[more]
B8B7C5	1.7e-42	70.15	Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp. indica OX=399...	[more]

BLAST of Sed0019530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P5FF95	2.3e-42	72.39	(S)-2-hydroxy-acid oxidase OS=Ananas comosus OX=4615 GN=LOC109712646 PE=3 SV=1	[more]
A0A6P5F8J6	2.3e-42	72.39	(S)-2-hydroxy-acid oxidase OS=Ananas comosus OX=4615 GN=LOC109712646 PE=3 SV=1	[more]
A0A072V9Z1	3.0e-42	73.13	(S)-2-hydroxy-acid oxidase OS=Medicago truncatula OX=3880 GN=MTR_2g070420 PE=3 S...	[more]
A0A2K3PMX8	3.9e-42	73.13	(S)-2-hydroxy-acid oxidase (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g01...	[more]
A0A6J1ISV7	8.8e-42	72.39	(S)-2-hydroxy-acid oxidase OS=Cucurbita maxima OX=3661 GN=LOC111478373 PE=3 SV=1	[more]

BLAST of Sed0019530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14420.1	3.2e-44	70.15	Aldolase-type TIM barrel family protein	[more]
AT3G14420.3	3.2e-44	70.15	Aldolase-type TIM barrel family protein	[more]
AT3G14420.2	3.2e-44	70.15	Aldolase-type TIM barrel family protein	[more]
AT3G14420.4	3.2e-44	70.15	Aldolase-type TIM barrel family protein	[more]
AT3G14420.5	3.2e-44	70.15	Aldolase-type TIM barrel family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 2..125 e-value: 1.1E-36 score: 128.4
IPR000262	FMN-dependent dehydrogenase	PFAM	PF01070	FMN_dh	coord: 4..125 e-value: 9.9E-24 score: 84.0
None	No IPR available	PANTHER	PTHR10578:SF129	ALPHA-HYDROXY ACID DEHYDROGENASE, FMN-DEPENDENT, ALDOLASE-TYPE TIM BARREL-RELATED	coord: 5..125
None	No IPR available	PANTHER	PTHR10578	S -2-HYDROXY-ACID OXIDASE-RELATED	coord: 5..125
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 5..125
IPR037396	FMN hydroxy acid dehydrogenase domain	PROSITE	PS51349	FMN_HYDROXY_ACID_DH_2	coord: 1..125 score: 30.80032

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019530.1	Sed0019530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009854	oxidative photosynthetic carbon pathway
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0003973	(S)-2-hydroxy-acid oxidase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity