Sed0019514 (gene) Chayote v1

Overview


Name	Sed0019514
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Disease resistance protein (TIR-NBS class)
Location	LG09: 30990629 .. 30992695 (+)
RNA-Seq Expression	Sed0019514
Synteny	Sed0019514

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGTTCTTCTTCTTCATCATCTTCGTTGCCAACTCGCCCTCGTAAATTTGACGTGTATCTGAGTTTTCGACAAGAAGACACTGGTGGCGATTTCACAGATCATTTGTACAACACCCTCGAACGAAAAGGAATCGTCGCATTCCGAGATGACAATCGTGACATGGAAGAAGACACCAACGAGGTTATATTGGCGGCGATTGAAACTTCGAAGGTGGCTGTGGTTGTGGTCTCTGAGAACTATGGTTCCTCAAGAAGGTGCCTTGGGGAGCTGGTTAAAATCCTTGAATGTAGAAATAAGATGGACATGAAGGTTTTCCCAATTTATTATAAAGTGGATCTTGATCATGTTAGAAGCCAAACAGGATGTTTTGGAAAAGCTTTTGTTGAGCATGAAGCAATGTATGGAGAAGATAACTTTGAGGTGAAGCAATGGAAGAAGGCTTTGATTGAGATTGCTAATCTCCCCGGTTGGGTTTGTAATGATTGGTAAAAAATTTCATTTCTCTTTTATCTATTCATTAATTTATTATTACTTTTATAATTATTTAAGTGGGTTTGTGCATTTTCAAACATGTGCCAAATTTATAGCCATTAGATTGTTTAATTGGTGAAAGTGAACATAGTTCAATTAATACCTTGAATATATTAAAAAACATGAAATTTATGGTTTAAATCTTTCATTTATTATCGTACTGAAAAAGTCTGTCTAATTGCAATAATCCGTGATTTTCTTAAAAAATTCATAGATTATTTTATTATATTTTTTATCAGAATGAATTGAATTATTTTTCTTTGTTCATGATTTTTTCCCATTCTTATGTCATAGATGAGAATTATGTTTGATGCCTTCCTTCCTCTTTGTTTTTCTATATGCTGGATATTGCATTTTAAGAAAACTTAAGAACTAAATTTTTTGTTAAAATTGTTTAAAAAAAAAAGGGGTTAAATTAGGGGATTTTGCATGTATAATAACAAGAGCAAAGTAATTCCATCTCTACTACAAAATTAAAACTAATTTTTATAGAATGTGTTGAAGGTAAAAACCCTTAAAAATTATGACCATTTACTCAAAATATTAAAACAAACAAATCATTTCTTTGCAACTTAAAAATATCTCTAAAAGTAGGAAATGGGATAAAGAAATCATCAACAAACTACCTTCTAGAAAAGAAAGGATATGAACAATTTTTTAGGATAACAACTATATTTGCAATTGAGGAATTATGTTGCGTAATAATTTGGTCGAAAATTCATGTCAGAATAGAACTTTCATAAAAATTAAAATTCACATTTGAGAATAAGATGTAACATTTCTAACATCTTCTGGGATTTTCTTGGTATAAATTAGGACACACAAACCAGAAGTCATAAAAGGCATATGTGACGCACTATTGAAAATAATCAAACCAACCTTTCAGGAAGAGATATCGATTCGATCGACTTCGAGTTTTAACGGTTTTGATTACTTTAAAGGTCTATTCGGTTGGCTTCATAGCGATGAGGAATCCTCGATTTATGAAGTAAGTTACGATACGATTTCTACAACAGTTTTCAATTTTGATTAATGAAGAAATAAAGGAAAGAACATGATTATCCATGTTTGTAAATGTAACAGAGAATGATGAAAAATGAAAGACTTGGGATGTTGCCTCAACGTGTAGAAGCTAAGCCAATGGACTCTCAAGGTAACATCTCTCTTTTTTAGTAGGGGAAATAACGTGATGTCAACCATAAATAATAGATTTAGAATTACCGCAATTCAAACAAATATATATTATTGTCTTATCCTTAATCAAGTTCTTATTCCAATTTAAATTAAATATTTAATAATTCAAAATTGAAAATATAATAGATTTAGAATCAACAAACAACCGCATTCATGTGATATTGTTCTCTTTGGATATAAGCCTTCTTGCCTTTGTTTTTTATCATTACCCAAAATGTTTCGTATCAACGGAGTTGTTGTCCCCCTTCTTATATATCCAAAATTTTCCCCTTAACTTAACCATGTCGGACAGTTTGCCCAACTTTAAGAATATAGATCTCTACCGAGAGTCAGTGA

mRNA sequence

ATGGCGTGTTCTTCTTCTTCATCATCTTCGTTGCCAACTCGCCCTCGTAAATTTGACGTGTATCTGAGTTTTCGACAAGAAGACACTGGTGGCGATTTCACAGATCATTTGTACAACACCCTCGAACGAAAAGGAATCGTCGCATTCCGAGATGACAATCGTGACATGGAAGAAGACACCAACGAGGTTATATTGGCGGCGATTGAAACTTCGAAGGTGGCTGTGGTTGTGGTCTCTGAGAACTATGGTTCCTCAAGAAGGTGCCTTGGGGAGCTGGTTAAAATCCTTGAATGTAGAAATAAGATGGACATGAAGGTTTTCCCAATTTATTATAAAGTGGATCTTGATCATGTTAGAAGCCAAACAGGATGTTTTGGAAAAGCTTTTGTTGAGCATGAAGCAATGTATGGAGAAGATAACTTTGAGGTGAAGCAATGGAAGAAGGCTTTGATTGAGATTGCTAATCTCCCCGGTTGGGTTTGTAATGATTGTCAGTGA

Coding sequence (CDS)

ATGGCGTGTTCTTCTTCTTCATCATCTTCGTTGCCAACTCGCCCTCGTAAATTTGACGTGTATCTGAGTTTTCGACAAGAAGACACTGGTGGCGATTTCACAGATCATTTGTACAACACCCTCGAACGAAAAGGAATCGTCGCATTCCGAGATGACAATCGTGACATGGAAGAAGACACCAACGAGGTTATATTGGCGGCGATTGAAACTTCGAAGGTGGCTGTGGTTGTGGTCTCTGAGAACTATGGTTCCTCAAGAAGGTGCCTTGGGGAGCTGGTTAAAATCCTTGAATGTAGAAATAAGATGGACATGAAGGTTTTCCCAATTTATTATAAAGTGGATCTTGATCATGTTAGAAGCCAAACAGGATGTTTTGGAAAAGCTTTTGTTGAGCATGAAGCAATGTATGGAGAAGATAACTTTGAGGTGAAGCAATGGAAGAAGGCTTTGATTGAGATTGCTAATCTCCCCGGTTGGGTTTGTAATGATTGTCAGTGA

Protein sequence

MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTNEVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCNDCQ

Homology

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BLAST of Sed0019514 vs. NCBI nr
Match: XP_022953345.1 (TMV resistance protein N-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 3.9e-44
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN--E 64
           ++SSSSL +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ DMEE TN   
Sbjct: 2   AASSSSLSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-DMEEGTNISS 61

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR+Q 
Sbjct: 62  ELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQR 121

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 122 GSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. NCBI nr
Match: XP_022953344.1 (TMV resistance protein N-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 3.9e-44
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN--E 64
           ++SSSSL +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ DMEE TN   
Sbjct: 2   AASSSSLSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-DMEEGTNISS 61

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR+Q 
Sbjct: 62  ELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQR 121

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 122 GSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. NCBI nr
Match: XP_022953343.1 (TMV resistance protein N-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 3.9e-44
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN--E 64
           ++SSSSL +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ DMEE TN   
Sbjct: 2   AASSSSLSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-DMEEGTNISS 61

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR+Q 
Sbjct: 62  ELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQR 121

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 122 GSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. NCBI nr
Match: KAG6575987.1 (TMV resistance protein N, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 99/164 (60.37%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 2   ACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN 61
           A SSSS SS  +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ +MEE TN
Sbjct: 3   ASSSSSLSSSSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-EMEEGTN 62

Query: 62  --EVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVR 121
               + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR
Sbjct: 63  ISSELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVR 122

Query: 122 SQTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           +Q G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 123 NQRGSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 165

[Close]

BLAST of Sed0019514 vs. NCBI nr
Match: XP_023548551.1 (TMV resistance protein N-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 4.3e-43
Identity = 99/165 (60.00%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 1   MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDT 60
           MA SSSSSS L     K+DV+LSFR EDT G FTDHLY    + GI  F+DD+ +MEE T
Sbjct: 1   MAASSSSSSRL----WKYDVFLSFRGEDTRGGFTDHLYEAFVQNGIHTFKDDD-EMEEGT 60

Query: 61  N--EVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHV 120
           N    + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  V
Sbjct: 61  NIYSELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDV 120

Query: 121 RSQTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           R+Q G FGKAF++HEA +GED+ +V QW+KAL EIA L  W  ++
Sbjct: 121 RNQRGSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWASDN 160

[Close]

BLAST of Sed0019514 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.9e-35
Identity = 80/157 (50.96%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 5   SSSSSSLPTRPR--KFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTNE 64
           +SSSSS P+ PR   +DV+LSFR EDT  +FTDHLY+ L R+GI  FRDD     E    
Sbjct: 9   ASSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRLRRGEAIAP 68

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            +L AIE S+ +V+V SENY  SR CL ELVKI+EC+  +   VFPI+Y VD  HVR Q 
Sbjct: 69  ELLKAIEESRSSVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHVRKQE 128

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGW 160
           G FG+AF  +E  + +   ++ +W+ AL E ANL GW
Sbjct: 129 GSFGEAFAGYEENWKD---KIPRWRTALTEAANLSGW 162

[Close]

BLAST of Sed0019514 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.9e-35
Identity = 89/168 (52.98%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 2   ACSSSSSSSLPTRPR--KFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEED 61
           A SSSSSSS P+ PR   +DV+LSFR EDT  +FTDHLY+ L R+GI  FRDD     E 
Sbjct: 9   ASSSSSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLRRGEA 68

Query: 62  TNEVILAAIETSKVAVVVVSENYGSSRRCLGELVKILEC-RNKMD--MKVFPIYYKVDLD 121
               +L AIE S+ +V+V SENY  SR CL ELVKI+EC ++K D    VFPI+Y VD  
Sbjct: 69  IAPELLKAIEESRSSVIVFSENYARSRWCLDELVKIMECHKDKKDPGHAVFPIFYHVDPS 128

Query: 122 HVRSQTGCFGKAFVEHEAMYGED-NFEVKQWKKALIEIANLPGWVCND 164
           HVR Q G FG+AF    A YGE+   ++ +W+ AL E ANL GW   D
Sbjct: 129 HVRKQEGSFGEAF----AGYGENLKDKIPRWRTALTEAANLSGWPLQD 172

[Close]

BLAST of Sed0019514 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-31
Identity = 78/159 (49.06%), Postives = 96/159 (60.38%), Query Frame = 0


Query: 1   MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNR-DMEED 60
           MA SSSSS         +DV+LSFR EDT   FT HLY  L  KGI  F+DD R +    
Sbjct: 1   MASSSSSSR------WSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGAT 60

Query: 61  TNEVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVR 120
               +  AIE S+ A+VV SENY +SR CL ELVKI+EC+ +    V PI+Y VD  HVR
Sbjct: 61  IPGELCKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVR 120

Query: 121 SQTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPG 159
           +Q   F KAF EHE  Y +D   +++W+ AL E ANL G
Sbjct: 121 NQKESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKG 153

[Close]

BLAST of Sed0019514 vs. ExPASy Swiss-Prot
Match: O82500 (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.9e-27
Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 1   MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDT 60
           MA SSS+S        ++DV+ SFR ED   +F  HL    E KGIV FRDD+       
Sbjct: 1   MASSSSNS-------WRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTI 60

Query: 61  NEVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRS 120
              + AAI  SK++VV+ SENY SS  CL EL++I++C+ +  +KV P++YKVD   +R 
Sbjct: 61  GHELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRK 120

Query: 121 QTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPG 159
           QTG FG +F+  E   G+       W++AL + AN+ G
Sbjct: 121 QTGKFGMSFL--ETCCGKTEERQHNWRRALTDAANILG 149

[Close]

BLAST of Sed0019514 vs. ExPASy Swiss-Prot
Match: Q9FT77 (Disease resistance protein RLM3 OS=Arabidopsis thaliana OX=3702 GN=RLM3 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 68/154 (44.16%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTNEVI 64
           SSSS S       +DV+ +FR ED       HL   L+RK I  F D+  +        +
Sbjct: 3   SSSSQS-------YDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPEL 62

Query: 65  LAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQTGC 124
           L AIE S++++VV S+NY SS  CL ELVKI EC  K+D  V PI+YKVD  HVR QTG 
Sbjct: 63  LLAIENSRISLVVFSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGE 122

Query: 125 FGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPG 159
           FG  F   E   G    E ++W +AL E+A+L G
Sbjct: 123 FGMVF--GETCKGRTENEKRKWMRALAEVAHLAG 147

[Close]

BLAST of Sed0019514 vs. ExPASy TrEMBL
Match: A0A6J1GN42 (TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455924 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.9e-44
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN--E 64
           ++SSSSL +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ DMEE TN   
Sbjct: 2   AASSSSLSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-DMEEGTNISS 61

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR+Q 
Sbjct: 62  ELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQR 121

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 122 GSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. ExPASy TrEMBL
Match: A0A6J1GPD6 (TMV resistance protein N-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455924 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.9e-44
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN--E 64
           ++SSSSL +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ DMEE TN   
Sbjct: 2   AASSSSLSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-DMEEGTNISS 61

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR+Q 
Sbjct: 62  ELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQR 121

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 122 GSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. ExPASy TrEMBL
Match: A0A6J1GPE0 (TMV resistance protein N-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455924 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.9e-44
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTN--E 64
           ++SSSSL +R  K+DV+LSFR EDT G FT HLY    R GI  F+DD+ DMEE TN   
Sbjct: 2   AASSSSLSSRLWKYDVFLSFRGEDTRGGFTGHLYEAFVRNGIHTFKDDD-DMEEGTNISS 61

Query: 65  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 124
            + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M MKV PI+YKVDL  VR+Q 
Sbjct: 62  ELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQR 121

Query: 125 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           G FGKAF++HEA +GED+ +V QW+KAL EIA L  WV ++
Sbjct: 122 GSFGKAFLKHEARFGEDDSKVLQWRKALFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. ExPASy TrEMBL
Match: A0A6J1JU68 (TMV resistance protein N-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487933 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.2e-42
Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 0


Query: 1   MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDT 60
           MA SSSSSSS   R  K+DV+LSFR +DT G FTDHLY    + GI  F+DD+ +MEE T
Sbjct: 1   MADSSSSSSS---RLWKYDVFLSFRGDDTRGGFTDHLYQAFVQNGIHTFKDDD-EMEEGT 60

Query: 61  N--EVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHV 120
           N    + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M M+V PI+YKVD   V
Sbjct: 61  NISSELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDV 120

Query: 121 RSQTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           R+Q G FGKAF++HEA +GED+ +V QW+K+L EIA L  WV ++
Sbjct: 121 RNQRGSFGKAFLKHEARFGEDDSKVLQWRKSLFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. ExPASy TrEMBL
Match: A0A6J1JQ43 (TMV resistance protein N-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487933 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.2e-42
Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 0


Query: 1   MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDT 60
           MA SSSSSSS   R  K+DV+LSFR +DT G FTDHLY    + GI  F+DD+ +MEE T
Sbjct: 1   MADSSSSSSS---RLWKYDVFLSFRGDDTRGGFTDHLYQAFVQNGIHTFKDDD-EMEEGT 60

Query: 61  N--EVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHV 120
           N    + AAIE S++AVVV+SE+Y SSR CL ELVKILECR  M M+V PI+YKVD   V
Sbjct: 61  NISSELFAAIEASRMAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDV 120

Query: 121 RSQTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPGWVCND 164
           R+Q G FGKAF++HEA +GED+ +V QW+K+L EIA L  WV ++
Sbjct: 121 RNQRGSFGKAFLKHEARFGEDDSKVLQWRKSLFEIAGLKAWVSDN 161

[Close]

BLAST of Sed0019514 vs. TAIR 10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 122.1 bits (305), Expect = 4.2e-28
Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 1   MACSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDT 60
           MA SSS+S        ++DV+ SFR ED   +F  HL    E KGIV FRDD+       
Sbjct: 1   MASSSSNS-------WRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTI 60

Query: 61  NEVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRS 120
              + AAI  SK++VV+ SENY SS  CL EL++I++C+ +  +KV P++YKVD   +R 
Sbjct: 61  GHELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRK 120

Query: 121 QTGCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPG 159
           QTG FG +F+  E   G+       W++AL + AN+ G
Sbjct: 121 QTGKFGMSFL--ETCCGKTEERQHNWRRALTDAANILG 149

[Close]

BLAST of Sed0019514 vs. TAIR 10
Match: AT1G27170.1 (transmembrane receptors;ATP binding )

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-28
Identity = 60/148 (40.54%), Postives = 93/148 (62.84%), Query Frame = 0


Query: 17  KFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDME--EDTNEVILAAIETSKVA 76
           K+DV+LSFR  DT  +F DHLY  L+ K +  FR DN  ME  ++ +  + A +E S  +
Sbjct: 13  KYDVFLSFRGADTRDNFGDHLYKALKDK-VRVFR-DNEGMERGDEISSSLKAGMEDSAAS 72

Query: 77  VVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQTGCFGKAFVEHEA 136
           V+V+S NY  SR CL EL  + + ++ +D ++ PI+Y VD  HVR Q+    K F EH+ 
Sbjct: 73  VIVISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPSHVRKQSDHIKKDFEEHQV 132

Query: 137 MYGEDNFEVKQWKKALIEIANLPGWVCN 163
            + E+  +V++W++AL  + NL G+VC+
Sbjct: 133 RFSEEKEKVQEWREALTLVGNLAGYVCD 158

[Close]

BLAST of Sed0019514 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-28
Identity = 72/166 (43.37%), Postives = 97/166 (58.43%), Query Frame = 0


Query: 6   SSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDD-----NRDMEEDT 65
           SSSSS    P+KFDV+LSFR +DT   F   LY  L   GI  F+DD      R +  D 
Sbjct: 3   SSSSSSSATPQKFDVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASD- 62

Query: 66  NEVILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRS 125
              +LAAIE SK+AVV++S+NY +S  CL ELV I++   K  + V PI+Y V+  HVR 
Sbjct: 63  ---LLAAIENSKIAVVIISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFYNVEPAHVRR 122

Query: 126 QTGCFGKAFVEHEAMYGEDNFE-VKQWKKALIEIANLPGWVCNDCQ 166
           Q     K F +HE   G +N+E V  W++AL  +A++ G    DC+
Sbjct: 123 QIEQVAKQFRKHE---GRENYETVVSWRQALTNLASISGHCSRDCE 161

[Close]

BLAST of Sed0019514 vs. TAIR 10
Match: AT5G49140.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 69/156 (44.23%), Postives = 94/156 (60.26%), Query Frame = 0


Query: 3   CSSSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTNE 62
           CSSS SSS      K+DV+ SFR ED  G+F  HL    E KGIV F+DD  +  +    
Sbjct: 4   CSSSGSSSC----WKYDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDLIERSQTIGL 63

Query: 63  VILAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQT 122
            +  A+  SK+ VV+ S+NY SS  CL ELV+IL+C  K + ++ PI+YKV+   VR+QT
Sbjct: 64  ELKEAVRQSKIFVVIFSKNYASSSWCLDELVEILKC--KEERRLIPIFYKVNPSDVRNQT 123

Query: 123 GCFGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPG 159
           G FG+ F   E   G+++    +WK AL E AN+ G
Sbjct: 124 GKFGRGF--RETCEGKNDETQNKWKAALTEAANIAG 151

[Close]

BLAST of Sed0019514 vs. TAIR 10
Match: AT4G16990.1 (disease resistance protein (TIR-NBS class), putative )

HSP 1 Score: 117.9 bits (294), Expect = 7.9e-27
Identity = 68/154 (44.16%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 5   SSSSSSLPTRPRKFDVYLSFRQEDTGGDFTDHLYNTLERKGIVAFRDDNRDMEEDTNEVI 64
           SSSS S       +DV+ +FR ED       HL   L+RK I  F D+  +        +
Sbjct: 3   SSSSQS-------YDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPEL 62

Query: 65  LAAIETSKVAVVVVSENYGSSRRCLGELVKILECRNKMDMKVFPIYYKVDLDHVRSQTGC 124
           L AIE S++++VV S+NY SS  CL ELVKI EC  K+D  V PI+YKVD  HVR QTG 
Sbjct: 63  LLAIENSRISLVVFSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGE 122

Query: 125 FGKAFVEHEAMYGEDNFEVKQWKKALIEIANLPG 159
           FG  F   E   G    E ++W +AL E+A+L G
Sbjct: 123 FGMVF--GETCKGRTENEKRKWMRALAEVAHLAG 147

The following BLAST results are available for this feature:

BLAST of Sed0019514 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953345.1	3.9e-44	60.87	TMV resistance protein N-like isoform X3 [Cucurbita moschata]	[more]
XP_022953344.1	3.9e-44	60.87	TMV resistance protein N-like isoform X2 [Cucurbita moschata]	[more]
XP_022953343.1	3.9e-44	60.87	TMV resistance protein N-like isoform X1 [Cucurbita moschata]	[more]
KAG6575987.1	1.1e-43	60.37	TMV resistance protein N, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548551.1	4.3e-43	60.00	TMV resistance protein N-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0019514 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	5.9e-35	50.96	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	5.9e-35	52.98	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
Q40392	1.8e-31	49.06	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
O82500	5.9e-27	41.77	Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FT77	1.1e-25	44.16	Disease resistance protein RLM3 OS=Arabidopsis thaliana OX=3702 GN=RLM3 PE=2 SV=...	[more]

BLAST of Sed0019514 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GN42	1.9e-44	60.87	TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1GPD6	1.9e-44	60.87	TMV resistance protein N-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1GPE0	1.9e-44	60.87	TMV resistance protein N-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JU68	5.2e-42	58.79	TMV resistance protein N-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1JQ43	5.2e-42	58.79	TMV resistance protein N-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of Sed0019514 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11170.1	4.2e-28	41.77	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G27170.1	7.2e-28	40.54	transmembrane receptors;ATP binding	[more]
AT1G17615.1	9.4e-28	43.37	Disease resistance protein (TIR-NBS class)	[more]
AT5G49140.1	1.6e-27	44.23	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16990.1	7.9e-27	44.16	disease resistance protein (TIR-NBS class), putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 17..156 e-value: 4.3E-36 score: 135.9
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 17..152 e-value: 3.8E-34 score: 118.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 16..165 score: 26.578659
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 15..165 e-value: 1.2E-52 score: 179.9
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 7..159
None	No IPR available	PANTHER	PTHR32009:SF84	TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN	coord: 13..162
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 13..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019514.1	Sed0019514.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity