Sed0019469 (gene) Chayote v1

Overview


Name	Sed0019469
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog 8A
Location	LG05: 40264538 .. 40267619 (-)
RNA-Seq Expression	Sed0019469
Synteny	Sed0019469

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCCCAAACCGCAAAGAAATTTCCACTTTTTCGCTAAAATCGCAAATCTAACCAACCAATCACTGTCAACCCTCACGCGCCTCTCCGGTGACTCGGTTGACGGCGGTTCTCCCATTTTCCGTACCCGGAATCGGTACATTTCCCCCAGCATTTGTGGGGTTTTTTCGTAATGTCTTGTTAATTGATTTTGTGTCTTTTTTTTTTTTTAGGTTTTTTGGTGAGTGGGTTTGTTCTGAATCGGTTTGATTGTGAATGTTATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTGTCTCATCAAGCTTCTTTTGATCGGCGATAGCGGTGTGTGATTTTTGTTTTTCTGGTTCAAAATTGGGAATGGCTTGTTTTTCTTGGATCTGAACTGATCTATCTAATCCTCAGCCCCATTCCATATAACCATTTTGTCATTAGGTTTTGAAACTAACAAAAAAAAGCTTCCTCTGGTTTTTTTGTTCTTGAAATGTGGTTTGAATTCACATACTAAAGATGAAACACATTGTGTAAAAATAAGCTTGAATTTCAAAAACCAAATGGTTATCCAGCTCGGCCTCAGTTTTTGGGATGAATTTGATTTGGTGTTCATTTTTGCAGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGGTGTGTATGAACTTCAATTTTCTGTGTAAATTCTCATGTCTTGTGGGATTAAACGCCATTTCCTTCTGAACTAACTAGGATGTTTGTTTGTTTGTTTGTTATGCAGCATTGATTTTAAAATCAGAACCATTGAGCTTGATGGGAAACGGATCAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGAGATTCCGTACAATCACCACAGGTTTTTCTTTTCTGTAATTGGGAGGTGGAATCATGATTCTTGTTTGATTTACTTGGGACTGTTCTTTACTTGATCTCTTCCTAAATTGGAAACTGATCTCTCAGGCTCCTATATATAACCATTTGTTATTTACCTTTTACAAACATTTTGAACGTCAAACCAAGTTTTAAGAACTAAGGAATATTTAGTTTTGTTATTGAAATTCAGTTGAGAATTCAAATATTTCCATTATGACAAAACAAATACCAAATGGTTATCAGATGGGCATCTTTGTTTTACATTTACGCTTTCATATATCAATGAAATGATTTGCTTCCTCTAATCCAAATAAATAAACGATGATATTTGACAGCATAGGTTTCAGTTTCGTCTTTGTTGCACATGGAGTTTGATTCTCTTTTATTTGTTTAAATAGATGTTTTTAGTATTCTTCAGGACTAGATAGTATCTGTAGCATTAACCGTCATGAGACAAGTATTGGGCAGAGTTTCTCAACAGTTCTGTTTGTTTTCAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTACGATGTTACAGATGAATCATCTTTCAACAGTGAGTAGCGCCATTTTTGCGATTTTTCATGTAGATTTTTGTTTTGGTGAATATAAATTTTCATTTCCAAAGTATACTTCCCTATGAGGTCCAGAAGATGTTTTATATTTCCATTTTCGTTTACAATTTGCCTTCTCATTTCTTCTTAACCTCCAACCATTTTCAGATATTAGAAATTGGATTCGCAACATTGAACAACATGCTTCTGATAATGTCAGCAAGATATTGGTAGGAAACAAGGCCGACATGGATGAAAGCAAAAGGGTATGCTATATTCTGCTATGAGATATGAAAGAAAGGCATTAACTCTAAATTGTTGTGCTACTAACCTCATACATAGCTTGTGAAAAAACTCTGGCTGATATGTGCCTTGGACTTGCTCACTGTCATTACATCAAAAAGAAAATATTACCAAACTGATATAACAAATTTTTTAGGCCTCATTTGATAACCATTTGGTTTTTTGTTTTTGAAATTTAAGGTTATTTTTATTCAAATTTCTTACCATGTGTTCCATCTTTCTTAATATGTATTCTTCATTCCTTAAGAAAAGTAGGTGAGTGCTAACCAAATTTCAAAAACAAAAACAATTTTTTGGAAGCTACTTGTTTTTTGTTTCTAAACTTTAGTTTGGTTTCTAAGAATATAGGTAGTATGTAGATATCCAAGTATAAAAATATATATGGTAAGATAGGTGATGTAGGCTCAAATTTCAAAAACAAAAATTAAAAACAAAATGGTTATCAAACGGAGCGTTTCTAAGTTTACCTTTCGCCAAAGCACATGTTACCATTTTTCTAACATCCTTTTATTACAGGCTGTGCCAACATCCAAAGGACAGGCGCTTGCTGATGAATATGGGATCAAATTCTTTGAAACTGTGAGTTGCTTGTTCTTCCTGTATAACATTTCCATAATGATGTGCGAAATTCTAAGATGAAAGATATATGCATTACAGAGTGCAAAGACTAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATAAGGCGTAATGCAGATACCGATTCCAAAGCCGAGGTAATTTTATCATTTTTCTGCTAACCTAAAATATCAAGAATAATAGAAGATAGATCTGTTTTGTTTTCCTACTGTATATGAAATTATTATCAATTCGTAAACTGTATAGTTTGGCTTTTGTTACGTTTGCAGCCTTCGACGATCAAGATTAATCAACAAGCCCAGGGAGCCAATGCTGGTCAGCCTGCGCAAAAATCAGCTTGCTGTGGTTCTTAAGATGATCAAACCCTTTGGAAGTAGTCATTCTTCATCTAGCTACTTTGTGATTCTTTTAACTTCATTTAGAGTGTAACAGATAGATAAGTACTTTCATGTTTTTACTATCTCATTTGTGATTATGTCTATATTATGAAGAGATTTATTTGTTCTTTACACCTTTTTGGTTTTCTGAAACAATGTTATCCCAATTATTTGTTTGCAACAAGATGGTTTGTACATAAACCAAATGTTTTTACTTTGAAATGATGAGCTTATCTTGGTATTGTTATGTTACTCCTTTCTCCAAAGAGGGTGCTGTAAGGAAACATCTGACTTTAAAAATTGAAGTGGGCT

mRNA sequence

ACCCCCAAACCGCAAAGAAATTTCCACTTTTTCGCTAAAATCGCAAATCTAACCAACCAATCACTGTCAACCCTCACGCGCCTCTCCGGTGACTCGGTTGACGGCGGTTCTCCCATTTTCCGTACCCGGAATCGGTTTTTTGGTGAGTGGGTTTGTTCTGAATCGGTTTGATTGTGAATGTTATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTGTCTCATCAAGCTTCTTTTGATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGCATTGATTTTAAAATCAGAACCATTGAGCTTGATGGGAAACGGATCAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGAGATTCCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTACGATGTTACAGATGAATCATCTTTCAACAATATTAGAAATTGGATTCGCAACATTGAACAACATGCTTCTGATAATGTCAGCAAGATATTGGTAGGAAACAAGGCCGACATGGATGAAAGCAAAAGGGCTGTGCCAACATCCAAAGGACAGGCGCTTGCTGATGAATATGGGATCAAATTCTTTGAAACTAGTGCAAAGACTAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATAAGGCGTAATGCAGATACCGATTCCAAAGCCGAGCCTTCGACGATCAAGATTAATCAACAAGCCCAGGGAGCCAATGCTGGTCAGCCTGCGCAAAAATCAGCTTGCTGTGGTTCTTAAGATGATCAAACCCTTTGGAAGTAGTCATTCTTCATCTAGCTACTTTGTGATTCTTTTAACTTCATTTAGAGTGTAACAGATAGATAAGTACTTTCATGTTTTTACTATCTCATTTGTGATTATGTCTATATTATGAAGAGATTTATTTGTTCTTTACACCTTTTTGGTTTTCTGAAACAATGTTATCCCAATTATTTGTTTGCAACAAGATGGTTTGTACATAAACCAAATGTTTTTACTTTGAAATGATGAGCTTATCTTGGTATTGTTATGTTACTCCTTTCTCCAAAGAGGGTGCTGTAAGGAAACATCTGACTTTAAAAATTGAAGTGGGCT

Coding sequence (CDS)

ATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTGTCTCATCAAGCTTCTTTTGATCGGCGATAGCGGTGTTGGTAAGAGTTGCCTTCTCTTACGTTTCTCAGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGCATTGATTTTAAAATCAGAACCATTGAGCTTGATGGGAAACGGATCAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGAGATTCCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTACGATGTTACAGATGAATCATCTTTCAACAATATTAGAAATTGGATTCGCAACATTGAACAACATGCTTCTGATAATGTCAGCAAGATATTGGTAGGAAACAAGGCCGACATGGATGAAAGCAAAAGGGCTGTGCCAACATCCAAAGGACAGGCGCTTGCTGATGAATATGGGATCAAATTCTTTGAAACTAGTGCAAAGACTAATCTTAATGTGGAAGAAGTTTTCTTCTCAATAGCAAGGGATATAAGGCGTAATGCAGATACCGATTCCAAAGCCGAGCCTTCGACGATCAAGATTAATCAACAAGCCCAGGGAGCCAATGCTGGTCAGCCTGCGCAAAAATCAGCTTGCTGTGGTTCTTAA

Protein sequence

MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIRRNADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS

Homology

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BLAST of Sed0019469 vs. NCBI nr
Match: XP_008448379.1 (PREDICTED: ras-related protein RABE1c [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 3.9e-108
Identity = 209/216 (96.76%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDSKAEPSTIKINQQ QGANAGQ AQKSACCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

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BLAST of Sed0019469 vs. NCBI nr
Match: XP_004148215.1 (ras-related protein RABE1c [Cucumis sativus] >KGN47361.1 hypothetical protein Csa_022967 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 207/216 (95.83%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+K+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDI+ R
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDSKAEPSTIKINQQ QGANAGQ AQKSACCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

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BLAST of Sed0019469 vs. NCBI nr
Match: XP_038900654.1 (ras-related protein RABE1c [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 208/216 (96.30%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDSKAEP TIKINQQ QGANAGQ AQKSACCGS
Sbjct: 181 LADTDSKAEPLTIKINQQDQGANAGQAAQKSACCGS 216

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BLAST of Sed0019469 vs. NCBI nr
Match: XP_022148361.1 (ras-related protein RABE1c-like [Momordica charantia] >XP_022148362.1 ras-related protein RABE1c-like [Momordica charantia])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCG 215
            ADTDSKAEPSTIKINQ  QGANAGQ AQKSACCG
Sbjct: 181 LADTDSKAEPSTIKINQD-QGANAGQAAQKSACCG 214

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BLAST of Sed0019469 vs. NCBI nr
Match: KAG6570726.1 (Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010570.1 Ras-related protein RABE1c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.0 bits (1011), Expect = 8.0e-106
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 160 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 219

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 220 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 279

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 280 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 339

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            +DTDSKAE STIKINQQ QGANAGQ AQKS+CCGS
Sbjct: 340 LSDTDSKAESSTIKINQQDQGANAGQAAQKSSCCGS 375

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BLAST of Sed0019469 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.1e-105
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            +DTDS+AEP+TIKI+Q  Q A AGQ  QKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0019469 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 196/216 (90.74%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTD++AEP TIKINQ  QGA   Q  QKSACCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

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BLAST of Sed0019469 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.6e-99
Identity = 192/218 (88.07%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIRR- 180
           V+KILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI++ 
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 --NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
             ++DT  +A+PS I I    Q  N  Q A KSACCGS
Sbjct: 181 LADSDTRQEAQPS-ITIKPADQSGN--QAAAKSACCGS 215

[Close]

BLAST of Sed0019469 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-95
Identity = 181/214 (84.58%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYD LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE VF SIA+DI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACC 214
             +TD+KAEP  IKI +Q   A++   A+KSACC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASS-STAEKSACC 213

[Close]

BLAST of Sed0019469 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.3e-94
Identity = 179/215 (83.26%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYD LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SIA+DI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQ-AQGANAGQPAQKSACC 214
             ++D+KAEP  IKI +Q A  A++    +KSACC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of Sed0019469 vs. ExPASy TrEMBL
Match: A0A1S3BJJ0 (ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 209/216 (96.76%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDSKAEPSTIKINQQ QGANAGQ AQKSACCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of Sed0019469 vs. ExPASy TrEMBL
Match: A0A0A0KHW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.1e-108
Identity = 207/216 (95.83%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+K+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI RDI+ R
Sbjct: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDSKAEPSTIKINQQ QGANAGQ AQKSACCGS
Sbjct: 181 LADTDSKAEPSTIKINQQDQGANAGQAAQKSACCGS 216

[Close]

BLAST of Sed0019469 vs. ExPASy TrEMBL
Match: A0A6J1D4V3 (ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111017030 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCG 215
            ADTDSKAEPSTIKINQ  QGANAGQ AQKSACCG
Sbjct: 181 LADTDSKAEPSTIKINQD-QGANAGQAAQKSACCG 214

[Close]

BLAST of Sed0019469 vs. ExPASy TrEMBL
Match: A0A6J1FYD5 (ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111448507 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.9e-106
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            +DTDSKAE STIKINQQ QGANAGQ AQKS+CCGS
Sbjct: 181 LSDTDSKAESSTIKINQQDQGANAGQAAQKSSCCGS 216

[Close]

BLAST of Sed0019469 vs. ExPASy TrEMBL
Match: A0A6J1CS03 (ras-related protein RABE1a-like OS=Momordica charantia OX=3673 GN=LOC111013648 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.6e-106
Identity = 205/216 (94.91%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDSKAEP TIKINQ  QGA A Q AQKSACCGS
Sbjct: 181 LADTDSKAEPQTIKINQPDQGAGAAQAAQKSACCGS 216

[Close]

BLAST of Sed0019469 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 385.6 bits (989), Expect = 2.7e-107
Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTDS+AEP+TIKI+Q  Q A AGQ  QKSACCGS
Sbjct: 181 LADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of Sed0019469 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 384.0 bits (985), Expect = 7.7e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            +DTDS+AEP+TIKI+Q  Q A AGQ  QKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0019469 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 384.0 bits (985), Expect = 7.7e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            +DTDS+AEP+TIKI+Q  Q A AGQ  QKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0019469 vs. TAIR 10
Match: AT3G46060.3 (RAB GTPase homolog 8A )

HSP 1 Score: 384.0 bits (985), Expect = 7.7e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            +DTDS+AEP+TIKI+Q  Q A AGQ  QKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0019469 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 380.6 bits (976), Expect = 8.6e-106
Identity = 196/216 (90.74%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 121 VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIR-R 180
           V+KILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DI+ R
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 NADTDSKAEPSTIKINQQAQGANAGQPAQKSACCGS 216
            ADTD++AEP TIKINQ  QGA   Q  QKSACCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of Sed0019469 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448379.1	3.9e-108	96.76	PREDICTED: ras-related protein RABE1c [Cucumis melo]	[more]
XP_004148215.1	1.5e-107	95.83	ras-related protein RABE1c [Cucumis sativus] >KGN47361.1 hypothetical protein Cs...	[more]
XP_038900654.1	1.9e-107	96.30	ras-related protein RABE1c [Benincasa hispida]	[more]
XP_022148361.1	3.6e-106	96.28	ras-related protein RABE1c-like [Momordica charantia] >XP_022148362.1 ras-relate...	[more]
KAG6570726.1	8.0e-106	94.91	Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of Sed0019469 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28186	1.1e-105	91.67	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
O24466	1.2e-104	90.74	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
Q39433	7.6e-99	88.07	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	1.7e-95	84.58	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	4.3e-94	83.26	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of Sed0019469 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJJ0	1.9e-108	96.76	ras-related protein RABE1c OS=Cucumis melo OX=3656 GN=LOC103490585 PE=4 SV=1	[more]
A0A0A0KHW0	7.1e-108	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303760 PE=4 SV=1	[more]
A0A6J1D4V3	1.7e-106	96.28	ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111017030 P...	[more]
A0A6J1FYD5	3.9e-106	94.91	ras-related protein RABE1c-like OS=Cucurbita moschata OX=3662 GN=LOC111448507 PE...	[more]
A0A6J1CS03	6.6e-106	94.91	ras-related protein RABE1a-like OS=Momordica charantia OX=3673 GN=LOC111013648 P...	[more]

BLAST of Sed0019469 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59840.1	2.7e-107	92.59	Ras-related small GTP-binding family protein	[more]
AT3G46060.1	7.7e-107	91.67	RAB GTPase homolog 8A	[more]
AT3G46060.2	7.7e-107	91.67	RAB GTPase homolog 8A	[more]
AT3G46060.3	7.7e-107	91.67	RAB GTPase homolog 8A	[more]
AT3G53610.1	8.6e-106	90.74	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.3 coord: 119..132 score: 50.69 coord: 57..79 score: 57.68 coord: 16..37 score: 55.38 coord: 155..177 score: 47.39
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..180 e-value: 1.3E-105 score: 366.9
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0023 score: 3.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..214 e-value: 2.1E-9 score: 47.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 17..180 e-value: 3.8E-37 score: 139.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..215
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 1..213
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..213
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..181 score: 11.226984
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..213 score: 37.513508
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 13..180 e-value: 4.87243E-119 score: 333.466
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..180 e-value: 5.7E-14 score: 58.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..178 e-value: 2.7E-66 score: 222.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..215 score: 21.757729
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 16..170 e-value: 2.4E-31 score: 106.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..213 e-value: 3.1E-75 score: 253.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019469.1	Sed0019469.1	mRNA
Sed0019469.2	Sed0019469.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
molecular_function	GO:0003925	G protein activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity