Sed0019335 (gene) Chayote v1

Overview


Name	Sed0019335
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Eukaryotic translation initiation factor 3 subunit H
Location	LG12: 3839349 .. 3844402 (+)
RNA-Seq Expression	Sed0019335
Synteny	Sed0019335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTTTCACCTTCTGCGATTTCGTCAGCTCCATCTTCAATCTTCATTGAGCTTTGCGAATCGCTAATCATGGCGAACAGTACGTACAACCTCAATCTTTCTTCTCTCGCTAATCCTTCATGCATTTGTTGTTGAGTTTGCAGTAGATTATGGGCTTGTTTTCGTTGTTGATGAATTATTTTGTTGTGGTGCAGCAATGGCTAGATCTTTCCTGCAGGTCGCTGCCACCGAAGAAGTAGCTTCCCCTCTCCGAGTAGTTCAGATTGAAGGATTGGTAATTTTCTTTTCTTTCTTTTTCTTATTTTGCGTTTGGTTCTGATCGAACTAATTAGAACTTAATCGTCGAATTAGTTCTTCCTCCGATAAGCGAACCTGAAGTTTTCATTTAATCCGTTTGGAAATTTTTCTATGATTTTTGTCTCCGAAGGGTAGCATGGTGGTTGAAGGCTTATGTTCCTCAAAGTCTATTTTCTGTCTCAATATCTCCCGGTACCTGGCCTAGGAACGGACGGGATTACCCTGGAACAAAGCTCTGATTTTCCGGTTTCCATAAAGGGCGTGTTTGGGCCCCCGCTTATGTAAATGGCTGGGTTGGTTATAATAACCCAACCGATGTTTGCACGGTGGTTACCTAAACCTGCGTGCCCGTTTATCTAAAATTACGTGTCCGTTTATCTAAACCTACGTGCTGCCCGTTTATTTAAACCTTACATATATTACTTTTTGTTACATAACCAGCCCTTCAAACACCGTTTATTATAATCCCTATTATAATAACTAGTCCTTCAAACACCATTTATCATAACCCACTATTTATCATAACCTTCCGTCTATCATAACCAAATTGGTGCTCCAAACACACCAAAAAAGAATTCATTAATTATTCTGGATGTACTTTGATAGTTGTTTGTTTTTTTAGTGGTTGCGACGAAGTATTTAGCATTGTGCAAACCTATTTTACCATTTGAAATGTGGTAGTTAGTTAGCCTTCCAATTTGGATTCAGAATTGGTGACTGTATTCTTTCCAAAGGTGAAGAATGAGTATTACTATTAGTGTTTATCTAAAATTGAACTTTTGATAACTTCTTCGATTTGGATATGTATCCCGAGGTTAAGGTAAATACCCTTTGTGTCAATTCCTCAGGCTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCGTCCCTTGTGACCGGGCAACTCCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGTTTTCCCTTCCCGGTATGATGAATTTTACTTTTGTGATGTCTTTGGTTTGGGTTTTTTTTTTCTACCCTTAAATGTCTTCTAACTTAACAACATGTATCTGTTAGACTCGGGAGGAGGATGAGGAGATTGAGGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGATAATAATACTGTCGGATGGTAAGCTTACTTCTATATTAATGCATATACATGGGGGGCATGGCATTATTAGTATGCAAATCAATTGTATATGCATGTGTTTGTTCTGTGTTCATATTTATTCACTTGTTTCTGTATGGTTCCCTCTATTCTATACCCCCACATGTTTATAATAGTTATTCATTGCTAGTGTTTGATGTGAGATTTTTTTTAATTAATTTTTTTAAAACGAAATATTATGCAATTGATACTATTTTACTTGTGTCCAACTATTGGAGATTATGGGTCATGCCTGAAACCTTATTTTCACCTATATTGTATTCATGGTTAAAAAATTTGTTCCAGCATCTTGGTTTTACTAACCTTTTTTTTTTTAATTTGTAATGTACAAATGTGAGGTTGAGGCTTCATTTTGGGTGTTCTTTTATTTTGACTTCATGAATGCAGAAAGAAGAGTTCTCCATCTGTCCCTTGTGCTTATGATATATGTTAGTTTTTAACCCACCATGTCATGTAGGTTGAGTTCTTCGGCTTACATGGTTGACATTATTGACAGATGGATTGGAACTAATTTCTTCCCATTGTTCATGTGGAGTGATTAATATTTTATTTAATTATATTCAGGTACCAGTCAACCTTCTTAGGTTCATATCAGACAGTAGAGCTGATTGAGACCTTTATGAATTATCAGGTATTAGTTCAGTCATTCTCTATTTATATATTTATAATTATTGAATTATTGTTATGTTTTTTCTATTAGGGCATTGTTGTTTTTGGATTTTCACAACGGGAAGCCTTTCTGATTAAGTATCTGAGTTTTTGAGATCAATTTCTTTTTGTGTCTGTTTTTTAATTAACATGTGAAATGAACACCTTGGAAATTCTTGGCAAGGTCCTTGTTGAGGCTGTCTATTTGTATTAGTGATTACTTATTGGTTCAAAGTGGAAGAAGGAACTCCTTCCAGTTCCTTGCTTCTCTCTTGAATAAGGAGGAAGAAGAAAAGGAAGACCTTCCTTCTTTCTGTGCTGCCTTTCAAAGCCAAAATTCTATTTTTCAACTTAAATAATGTGTTTGTTGTGTCTGGCTAAGTGTTCTAGAAATTAATGCATGTGTGTTTTTTTTGTCTCAAGAAAATTTTGTTTATAGAATGACTTGCCCAATATATTTTTGGGGTTGAATATTTGTGATGGTAAGCTCATTAATAACTTACAAGTCTTAGGCAGTATGCTTTCTGTCTGTTGTCTGAGTAGACACTGAGTTCAACACTATCAATCAGACATTTTTTTTTTCGTGGCCCTTTTTTTTCTTCTTGACTTTACATCAATATTTTAACCATAAGTTTGCAGGAAAACATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGTGTCTTAGCTCTCAAGGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGTAGTAACAACTTTATAGGAGAGAAGTACGTAACTTCATTGCCATTATTCTTTCATCTAAGTCAAGTTACTTATTGGAAATTTATTCGCTTGCTTCCATAGGTTGAGGGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTGTAAGTCATTTCGGCCTGTATAGTTATTTTTCTTGTATGGTATTGGAAAATTATTCTAAGAGTTAATATAGCGACAAGCAATTATATTATTTTTCCTTGATTGTTTCTTTGTTTGTGGGTTCAGTGTGGATTAAATCAAATCTTATTTTGGTCTTTTAACTTTCATACACTTTTATGCCGAGTTGGTTCATAAACTCTCTAATGCTTTAGTTTTTAGTCTCAATTTTTTTTAATGTTTTATTCTAGTAGTACCCTTGCAATTATTTTAGGTCAACTTTCGTGGTTCTATGAGTGAAAAAAAATGAAATCCAACACTCGCTGCTCAGAAACAGACATGCACTCACTAATTAAATGATAAAAAAATGTTCATTAGAATCTTTGTTAGGAATTAAGTGAAGGGGTGGCACAGTGGTTGAAAGCTTGAGCTTTTAAGGTATGCTTCCTTCCTTCAATGTCCCAGGTTCGATGCTTACCTGTGACATTACTCCTTGTTTAAAAAAAAAATAAAAAATTGTAAGGGCCTAAAATGGATTGTTTATGCACGATCCTAGAGCTGAAACAAAATATTTGATGGTCTAGGGATCAAATTGGCAATAAGCATGAAAGTTTTGAGATCAAAATAAGAGAGGTTTTATTTTTTCAGGATCAGTTTTGAATCCTATTTCCTTGTCTAAAAGTGATTTTAGGTTTACGAAGTTGCTAAGTAGACATTAGACAACGTAATAATATAATCTGATCATTGTCTTATTTCTGTATCTTTAGATCAAAGTTTCAAACTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGAGTCTCCAGTTACTCAGGTAATAACGTGATACTCCTCTCGTTGTAGGTTATCCAAATTTTACTCTTTTTTTTAATCGATTCAAGCGTTGATGTTTCAGTGTGATTATGATCGCCTGCAACTTTCAACCAACCCGTTTATGGAGAGGAATGTGGAATTTCTGATCGAATGTATGGACGATTTATCGGCGGAGCAGCAGAAGGTTTGTAGACTCCTTTGATTTTTTTTTTTCTGGTGATATTTCTTGATATTTGTATGATTGGTTGTGACACAAGGTAAATCAAATTTCTTTTTCCAGTTCCAGTTCTATTATCGCAGCCTAACTCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGTGAATCTCTTGTTAGGACAATTTTGACATATTTTCTGTTGGAAATTGTTTTTCTTCGATTTTAGCACGAATATATGGTAATATTTGGCTTGCATCTTAACTGTTAACGATACCGACGAGAGAACGGTTGTAAGAGGGGTAGGGGGGGGGCATCAACAAATAACAAGGAGGACCATTCGTAACTTTCTGGAATCTGTTTCGTAGGGCCGAGAATGCGATGAGAAAGGCAGCAGGAGAAGATCCTCTCCCTGAGGAGGATCCTGCAAACCCCATCTTTAAGTCACTCCCCGAGCCATCGCGTTTGGACAGCTATCTCATAACGAATCAAGTAGCAAACTACTGCAACCAAATTAATGGGTATGGCACTGGTTGTCCAAAAAGGAATTTCGTTTTGTTTTCTGAAAGTTGATTAATTTTATCTCTTGTGTTGAAAAAATTTCAGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTCTGCATGACAATTAGCCCTTTGACGCTTTTGAATGTCTATTCTACTTTTTGTAATGCATATGGAGATTTTGTTTTGAGATATGATCGTAGAGTTTCTGTAATTTATTTTAATTTAATCAAATATCATTGTTTTGGTACATCCTAAAAATTCGTTTAGTGTATTCCATGTGAATGTGTAAATTTTATTGTCTGTCTTTTGAGTTCGTGGAACTTGCATGGGGGTGCCCTCAGGTTTAGAAAGGTCAAGCTCCAATTTTAGATTAAATTTTGAATAAAACATCATCTCCCTATGGGAGGAATTTGGTCGATATTTGATAATTTTAAAATGACTTTGAATTTGCAGA

mRNA sequence

AATTTTTTCACCTTCTGCGATTTCGTCAGCTCCATCTTCAATCTTCATTGAGCTTTGCGAATCGCTAATCATGGCGAACACAATGGCTAGATCTTTCCTGCAGGTCGCTGCCACCGAAGAAGTAGCTTCCCCTCTCCGAGTAGTTCAGATTGAAGGATTGGCTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCGTCCCTTGTGACCGGGCAACTCCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGTTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAGGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGATAATAATACTGTCGGATGGTACCAGTCAACCTTCTTAGGTTCATATCAGACAGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAACATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGTGTCTTAGCTCTCAAGGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGTAGTAACAACTTTATAGGAGAGAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCAAACTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGAGTCTCCAGTTACTCAGTGTGATTATGATCGCCTGCAACTTTCAACCAACCCGTTTATGGAGAGGAATGTGGAATTTCTGATCGAATGTATGGACGATTTATCGGCGGAGCAGCAGAAGTTCCAGTTCTATTATCGCAGCCTAACTCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCCGAGAATGCGATGAGAAAGGCAGCAGGAGAAGATCCTCTCCCTGAGGAGGATCCTGCAAACCCCATCTTTAAGTCACTCCCCGAGCCATCGCGTTTGGACAGCTATCTCATAACGAATCAAGTAGCAAACTACTGCAACCAAATTAATGGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTCTGCATGACAATTAGCCCTTTGACGCTTTTGAATGTCTATTCTACTTTTTGTAATGCATATGGAGATTTTGTTTTGAGATATGATCGTAGAGTTTCTGTAATTTATTTTAATTTAATCAAATATCATTGTTTTGGTACATCCTAAAAATTCGTTTAGTGTATTCCATGTGAATGTGTAAATTTTATTGTCTGTCTTTTGAGTTCGTGGAACTTGCATGGGGGTGCCCTCAGGTTTAGAAAGGTCAAGCTCCAATTTTAGATTAAATTTTGAATAAAACATCATCTCCCTATGGGAGGAATTTGGTCGATATTTGATAATTTTAAAATGACTTTGAATTTGCAGA

Coding sequence (CDS)

ATGGCGAACACAATGGCTAGATCTTTCCTGCAGGTCGCTGCCACCGAAGAAGTAGCTTCCCCTCTCCGAGTAGTTCAGATTGAAGGATTGGCTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCGTCCCTTGTGACCGGGCAACTCCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGTTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAGGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGATAATAATACTGTCGGATGGTACCAGTCAACCTTCTTAGGTTCATATCAGACAGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAACATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGTGTCTTAGCTCTCAAGGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGTAGTAACAACTTTATAGGAGAGAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCAAACTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGAGTCTCCAGTTACTCAGTGTGATTATGATCGCCTGCAACTTTCAACCAACCCGTTTATGGAGAGGAATGTGGAATTTCTGATCGAATGTATGGACGATTTATCGGCGGAGCAGCAGAAGTTCCAGTTCTATTATCGCAGCCTAACTCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCCGAGAATGCGATGAGAAAGGCAGCAGGAGAAGATCCTCTCCCTGAGGAGGATCCTGCAAACCCCATCTTTAAGTCACTCCCCGAGCCATCGCGTTTGGACAGCTATCTCATAACGAATCAAGTAGCAAACTACTGCAACCAAATTAATGGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTCTGCATGACAATTAG

Protein sequence

MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN

Homology

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BLAST of Sed0019335 vs. NCBI nr
Match: XP_022932637.1 (eukaryotic translation initiation factor 3 subunit H [Cucurbita moschata] >XP_022972109.1 eukaryotic translation initiation factor 3 subunit H [Cucurbita maxima] >XP_023539151.1 eukaryotic translation initiation factor 3 subunit H [Cucurbita pepo subsp. pepo] >KAG6597643.1 Eukaryotic translation initiation factor 3 subunit H, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 649.8 bits (1675), Expect = 1.3e-182
Identity = 325/337 (96.44%), Postives = 328/337 (97.33%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVA TEEVASPLRVVQIEGL ILKIIKHCKEFSPSLVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNF GEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDPANPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. NCBI nr
Match: XP_038880772.1 (eukaryotic translation initiation factor 3 subunit H [Benincasa hispida])

HSP 1 Score: 648.3 bits (1671), Expect = 3.7e-182
Identity = 324/337 (96.14%), Postives = 330/337 (97.92%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVAATEEVASPLRVVQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSN+F GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDP NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ANYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. NCBI nr
Match: XP_023526031.1 (eukaryotic translation initiation factor 3 subunit H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 647.9 bits (1670), Expect = 4.8e-182
Identity = 323/337 (95.85%), Postives = 330/337 (97.92%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVAATEEVA+PLRVVQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAATEEVATPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNF GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQL  NPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLPANPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGE+PLPEEDP NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ANYCNQINGVAGQSFN+LHLMKALHD+
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNKLHLMKALHDS 337

[Close]

BLAST of Sed0019335 vs. NCBI nr
Match: XP_022145220.1 (eukaryotic translation initiation factor 3 subunit H [Momordica charantia])

HSP 1 Score: 644.8 bits (1662), Expect = 4.1e-181
Identity = 322/337 (95.55%), Postives = 328/337 (97.33%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVAATEEVASPL+ VQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGS L
Sbjct: 1   MANTMARSFLQVAATEEVASPLKFVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSTL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNF GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
            IFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 GIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDP+NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPSNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ANYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. NCBI nr
Match: XP_008453973.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit H [Cucumis melo] >TYK16981.1 eukaryotic translation initiation factor 3 subunit H [Cucumis melo var. makuwa])

HSP 1 Score: 644.8 bits (1662), Expect = 4.1e-181
Identity = 321/337 (95.25%), Postives = 330/337 (97.92%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVAATEEVASPLRVVQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+F GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE++SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDP NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ++NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQISNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. ExPASy Swiss-Prot
Match: Q9C5Z2 (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana OX=3702 GN=TIF3H1 PE=1 SV=2)

HSP 1 Score: 567.4 bits (1461), Expect = 1.1e-160
Identity = 278/335 (82.99%), Postives = 311/335 (92.84%), Query Frame = 0


Query: 4   TMARSFLQ-VAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVLEV 63
           TMARSFLQ ++  E VA PLRVVQIEGLA+LKIIKHCKEFSP+LVTGQLLGLDVGSVLEV
Sbjct: 3   TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEV 62

Query: 64  TNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETF 123
           TNCFPFP R++DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQST LGSYQTVELIETF
Sbjct: 63  TNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETF 122

Query: 124 MNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDI 183
           MNYQENI+RCVCIIYDPS+++ GVLALKALKLSDSFMELYR  NF GEKLREKN SW+DI
Sbjct: 123 MNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDI 182

Query: 184 FEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAE 243
           FEEIPIKVSNSAL+SAFMTELE ++PV+Q DYDRL  ST PF+E N+EFLI+CMDDLS E
Sbjct: 183 FEEIPIKVSNSALVSAFMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSME 242

Query: 244 QQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLD 303
           QQKFQ+YYR+L+RQQAQQQAWLQKRR EN  RK+AGE+PLPEEDP+NPIFK++PEPSRL+
Sbjct: 243 QQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLE 302

Query: 304 SYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           S+LITNQV+N+C QINGVAGQ+F+RL+L KALHDN
Sbjct: 303 SFLITNQVSNFCGQINGVAGQNFSRLYLTKALHDN 337

[Close]

BLAST of Sed0019335 vs. ExPASy Swiss-Prot
Match: A7SA47 (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis OX=45351 GN=v1g168210 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.5e-74
Identity = 143/315 (45.40%), Postives = 212/315 (67.30%), Query Frame = 0


Query: 24  VVQIEGLAILKIIKHCKE--FSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADG 83
           +VQ++GL +LKIIKHC+E   S  LV G LLGL   + LE+TNCFPFP+ +  ++ + D 
Sbjct: 17  IVQVDGLTVLKIIKHCEEEGSSGDLVQGVLLGLIQDNRLEITNCFPFPSNKAGDDEDDDD 76

Query: 84  ANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSR 143
            NYQ+E+MR LR VN+D+  VGWYQST+LGSY    L+++  +YQ++I   V +IYDP R
Sbjct: 77  VNYQMEVMRRLRAVNIDHLHVGWYQSTYLGSYINRTLLDSQYSYQKSIEESVVLIYDPLR 136

Query: 144 SNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDIFEEIPIKVSNSALISAFMT 203
           ++QG+L LKA +LSD  M+LY+   F  +KL +  +S+  +F+EIP+ + NS+L++  + 
Sbjct: 137 TSQGMLTLKAFRLSDEMMKLYKDGEFSADKLSKAGISFHSMFQEIPLVIKNSSLMNVLLC 196

Query: 204 ELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAEQQKFQFYYRSLTRQQAQQQ 263
           EL+  +P    D   L LST  ++E+NV  L+E +D+L  +  K+  Y RS+ RQQ Q++
Sbjct: 197 ELDENTPTPSAD-QFLTLSTGSYLEKNVRVLMESVDELCQDSNKYHNYQRSVIRQQQQKE 256

Query: 264 AWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLDSYLITNQVANYCNQINGVA 323
            +LQ+R+ EN  R   GEDPLP+ED  + +FK LP PSRLD+ L++ QV  YC  ++  +
Sbjct: 257 NYLQRRQQENQSRIQRGEDPLPDED-LSKMFKPLPVPSRLDNLLLSEQVNTYCQHVHQFS 316

Query: 324 GQSFNRLHLMKALHD 337
            QSF +  L +AL D
Sbjct: 317 TQSFGKFFLAQALQD 329

[Close]

BLAST of Sed0019335 vs. ExPASy Swiss-Prot
Match: Q54UD0 (Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum OX=44689 GN=eif3H PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.5e-72
Identity = 145/316 (45.89%), Postives = 208/316 (65.82%), Query Frame = 0


Query: 20  SPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEA 79
           S L VVQI+GL +LKIIK CKE+ P LV GQLLGLD+G+ LEV+NCFPFP R++++E   
Sbjct: 14  SKLDVVQIDGLVVLKIIKQCKEYLPELVPGQLLGLDIGTSLEVSNCFPFPPRDQEDENSE 73

Query: 80  DGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENI-RRCVCIIYD 139
             A+YQLEMMR LREVN+D+NTVGWY  T+L S+    +IET  NYQ  I ++CV I+YD
Sbjct: 74  SIADYQLEMMRFLREVNIDSNTVGWYTPTYLNSFFNESVIETQYNYQATINQKCVVIVYD 133

Query: 140 PSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDIFEEIPIKVSNSALISA 199
           P +++QG L+LK  +L+ SFMEL++  +F  E+L + NLS+ DIFE+IPIK+ NS LI+A
Sbjct: 134 PIKTSQGTLSLKCYRLTQSFMELFKDQSFSRERLDQANLSFNDIFEQIPIKIHNSQLINA 193

Query: 200 FMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAEQQKFQFYYRSLTRQQA 259
            + E +  S      +DRL +S N ++E+ VE + +C++ L+ E  K     R++   Q 
Sbjct: 194 LLYEFDGASNNLTNSFDRLNISNNIYLEKVVEGMTDCLESLNQELNKVYINQRNI---QT 253

Query: 260 QQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLDSYLITNQVANYCNQIN 319
           Q+  ++Q++  E             +ED    + K L  PS+L S L+TNQ+ NY +QI+
Sbjct: 254 QKTNYIQQKFLEGQK---------VDEDELASMIKPLNPPSKLTSLLLTNQINNYTDQIH 313

Query: 320 GVAGQSFNRLHLMKAL 335
             +G S  +L L+K L
Sbjct: 314 SFSGNSLTKLSLLKDL 317

[Close]

BLAST of Sed0019335 vs. ExPASy Swiss-Prot
Match: Q5PPY6 (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis OX=8355 GN=eif3h PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.3e-65
Identity = 131/317 (41.32%), Postives = 207/317 (65.30%), Query Frame = 0


Query: 22  LRVVQIEGLAILKIIKHCKE--FSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEA 81
           ++ VQI+GL +LKIIKH +E      +V G LLGL V   LE+TNCFPFP   ED +++ 
Sbjct: 18  VKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFPQHTED-DVDF 77

Query: 82  DGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDP 141
           D   YQ+EMMR LR VN+D+  VGWYQSTF G++ +  L+++  +YQ  I   V +IYDP
Sbjct: 78  DEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDP 137

Query: 142 SRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDIFEEIPIKVSNSALISAF 201
            +++QG L+LKA +L+   ME+ +  +F  E L++ N+++ D+FEE+PI + NS LI+  
Sbjct: 138 IKTSQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKANVAYEDMFEEVPIVIKNSHLINVL 197

Query: 202 MTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAEQQKFQFYYRSLTRQQAQ 261
           + EL+ ++PVT+  ++ L LS++  +E++++ L++ +D++S +  K+  Y R++ +QQ Q
Sbjct: 198 VWELDKKAPVTE-KHELLNLSSSNHLEKSLQLLMDRVDEMSQDIVKYNTYQRNVGKQQQQ 257

Query: 262 QQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLDSYLITNQVANYCNQING 321
           +  + Q+++ EN  R + GE PLPEED  N +FK    PSR+D  LI  Q+  Y   I G
Sbjct: 258 KHQYTQRKQQENLQRLSRGETPLPEED-VNKMFKPPVTPSRMDPLLIAGQINTYIQHIKG 317

Query: 322 VAGQSFNRLHLMKALHD 337
              Q+  +L + +AL D
Sbjct: 318 FTSQNLGKLFMAEALQD 331

[Close]

BLAST of Sed0019335 vs. ExPASy Swiss-Prot
Match: Q6AXJ2 (Eukaryotic translation initiation factor 3 subunit H-A OS=Danio rerio OX=7955 GN=eif3ha PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.6e-65
Identity = 131/319 (41.07%), Postives = 207/319 (64.89%), Query Frame = 0


Query: 21  PLRVVQIEGLAILKIIKHCKE--FSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIE 80
           P++ +Q++GL +LKIIKH +E      +V G LLGL V   LE+TNCFPFP   ED ++E
Sbjct: 18  PVKQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFPQHTED-DVE 77

Query: 81  ADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYD 140
            D   YQ+EMMR LR VN+D+  VGWYQST+ GS+ +  L+++  +YQ  I   V +IYD
Sbjct: 78  FDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVSRALLDSQFSYQHAIEESVVLIYD 137

Query: 141 PSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDIFEEIPIKVSNSALISA 200
           P ++ QG L LKA +L+   ME+ +  +F  E L++  +++  +FEE+PI + NS LI+ 
Sbjct: 138 PLKTAQGSLCLKAYRLTPKLMEICKEKDFTPEGLKKAAVAYEHMFEEVPIFIKNSHLINV 197

Query: 201 FMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAEQQKFQFYYRSLTRQQA 260
            M +L+ +S +    ++ L LS++  +E++++ L++ +DD+S +  K+  Y R+L++QQ 
Sbjct: 198 LMWDLQEKSTLAD-KHELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTYCRNLSKQQQ 257

Query: 261 QQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLDSYLITNQVANYCNQIN 320
           Q+Q + Q+R+ ENA R++ GE PLPEED  + +FK+   P R+D+ LI  Q+ NYC  I 
Sbjct: 258 QKQQYQQRRQQENAQRQSRGEPPLPEED-ISKMFKAPQAPPRMDTLLIAGQINNYCQNIK 317

Query: 321 GVAGQSFNRLHLMKALHDN 338
               Q+  +L + +AL  N
Sbjct: 318 EFTSQNLGKLFMAEALQSN 333

[Close]

BLAST of Sed0019335 vs. ExPASy TrEMBL
Match: A0A6J1IAJ1 (Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita maxima OX=3661 GN=LOC111470742 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 6.2e-183
Identity = 325/337 (96.44%), Postives = 328/337 (97.33%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVA TEEVASPLRVVQIEGL ILKIIKHCKEFSPSLVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNF GEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDPANPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. ExPASy TrEMBL
Match: A0A6J1EXB6 (Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita moschata OX=3662 GN=LOC111439131 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 6.2e-183
Identity = 325/337 (96.44%), Postives = 328/337 (97.33%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVA TEEVASPLRVVQIEGL ILKIIKHCKEFSPSLVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNF GEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDPANPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. ExPASy TrEMBL
Match: A0A5D3CYC1 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001220 PE=3 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.0e-181
Identity = 321/337 (95.25%), Postives = 330/337 (97.92%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVAATEEVASPLRVVQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+F GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE++SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDP NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ++NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQISNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. ExPASy TrEMBL
Match: A0A0A0KTY9 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis sativus OX=3659 GN=Csa_4G015700 PE=3 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.0e-181
Identity = 321/337 (95.25%), Postives = 330/337 (97.92%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVAATEEVASPLRVVQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+F GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE++SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQ+WLQKRRAEN  RKAAGE+PLPEEDP NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQSWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ANYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. ExPASy TrEMBL
Match: A0A6J1CTU8 (Eukaryotic translation initiation factor 3 subunit H OS=Momordica charantia OX=3673 GN=LOC111014724 PE=3 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.0e-181
Identity = 322/337 (95.55%), Postives = 328/337 (97.33%), Query Frame = 0


Query: 1   MANTMARSFLQVAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVAATEEVASPL+ VQIEGL ILKIIKHCKEFSP+LVTGQLLGLDVGS L
Sbjct: 1   MANTMARSFLQVAATEEVASPLKFVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSTL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNF GEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
            IFEEIPIKVSNSALISAFMTELEA+SPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 GIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 AEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSR 300
            EQQKFQFYYRSLTRQQAQQQAWLQKRRAEN  RKAAGE+PLPEEDP+NPIFK LPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPSNPIFKPLPEPSR 300

Query: 301 LDSYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           LDSYLITNQ+ANYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Sed0019335 vs. TAIR 10
Match: AT1G10840.1 (translation initiation factor 3 subunit H1 )

HSP 1 Score: 567.4 bits (1461), Expect = 7.7e-162
Identity = 278/335 (82.99%), Postives = 311/335 (92.84%), Query Frame = 0


Query: 4   TMARSFLQ-VAATEEVASPLRVVQIEGLAILKIIKHCKEFSPSLVTGQLLGLDVGSVLEV 63
           TMARSFLQ ++  E VA PLRVVQIEGLA+LKIIKHCKEFSP+LVTGQLLGLDVGSVLEV
Sbjct: 3   TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEV 62

Query: 64  TNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETF 123
           TNCFPFP R++DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQST LGSYQTVELIETF
Sbjct: 63  TNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETF 122

Query: 124 MNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDI 183
           MNYQENI+RCVCIIYDPS+++ GVLALKALKLSDSFMELYR  NF GEKLREKN SW+DI
Sbjct: 123 MNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDI 182

Query: 184 FEEIPIKVSNSALISAFMTELEAESPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAE 243
           FEEIPIKVSNSAL+SAFMTELE ++PV+Q DYDRL  ST PF+E N+EFLI+CMDDLS E
Sbjct: 183 FEEIPIKVSNSALVSAFMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSME 242

Query: 244 QQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLD 303
           QQKFQ+YYR+L+RQQAQQQAWLQKRR EN  RK+AGE+PLPEEDP+NPIFK++PEPSRL+
Sbjct: 243 QQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLE 302

Query: 304 SYLITNQVANYCNQINGVAGQSFNRLHLMKALHDN 338
           S+LITNQV+N+C QINGVAGQ+F+RL+L KALHDN
Sbjct: 303 SFLITNQVSNFCGQINGVAGQNFSRLYLTKALHDN 337

[Close]

BLAST of Sed0019335 vs. TAIR 10
Match: AT1G10840.2 (translation initiation factor 3 subunit H1 )

HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-119
Identity = 205/250 (82.00%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 88  MMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVL 147
           MMRCLREVNVDNNTVGWYQST LGSYQTVELIETFMNYQENI+RCVCIIYDPS+++ GVL
Sbjct: 1   MMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVL 60

Query: 148 ALKALKLSDSFMELYRSNNFIGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEAES 207
           ALKALKLSDSFMELYR  NF GEKLREKN SW+DIFEEIPIKVSNSAL+SAFMTELE ++
Sbjct: 61  ALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSAFMTELETDT 120

Query: 208 PVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSAEQQKFQFYYRSLTRQQAQQQAWLQKR 267
           PV+Q DYDRL  ST PF+E N+EFLI+CMDDLS EQQKFQ+YYR+L+RQQAQQQAWLQKR
Sbjct: 121 PVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKR 180

Query: 268 RAENAMRKAAGEDPLPEEDPANPIFKSLPEPSRLDSYLITNQVANYCNQINGVAGQSFNR 327
           R EN  RK+AGE+PLPEEDP+NPIFK++PEPSRL+S+LITNQV+N+C QINGVAGQ+F+R
Sbjct: 181 RTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLESFLITNQVSNFCGQINGVAGQNFSR 240

Query: 328 LHLMKALHDN 338
           L+L KALHDN
Sbjct: 241 LYLTKALHDN 250

The following BLAST results are available for this feature:

BLAST of Sed0019335 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932637.1	1.3e-182	96.44	eukaryotic translation initiation factor 3 subunit H [Cucurbita moschata] >XP_02...	[more]
XP_038880772.1	3.7e-182	96.14	eukaryotic translation initiation factor 3 subunit H [Benincasa hispida]	[more]
XP_023526031.1	4.8e-182	95.85	eukaryotic translation initiation factor 3 subunit H-like [Cucurbita pepo subsp....	[more]
XP_022145220.1	4.1e-181	95.55	eukaryotic translation initiation factor 3 subunit H [Momordica charantia]	[more]
XP_008453973.1	4.1e-181	95.25	PREDICTED: eukaryotic translation initiation factor 3 subunit H [Cucumis melo] >...	[more]

BLAST of Sed0019335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5Z2	1.1e-160	82.99	Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana OX=...	[more]
A7SA47	4.5e-74	45.40	Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis O...	[more]
Q54UD0	5.5e-72	45.89	Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum...	[more]
Q5PPY6	2.3e-65	41.32	Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis OX=8355 G...	[more]
Q6AXJ2	6.6e-65	41.07	Eukaryotic translation initiation factor 3 subunit H-A OS=Danio rerio OX=7955 GN...	[more]

BLAST of Sed0019335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAJ1	6.2e-183	96.44	Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EXB6	6.2e-183	96.44	Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita moschata OX=36...	[more]
A0A5D3CYC1	2.0e-181	95.25	Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo var. makuwa...	[more]
A0A0A0KTY9	2.0e-181	95.25	Eukaryotic translation initiation factor 3 subunit H OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1CTU8	2.0e-181	95.55	Eukaryotic translation initiation factor 3 subunit H OS=Momordica charantia OX=3...	[more]

BLAST of Sed0019335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10840.1	7.7e-162	82.99	translation initiation factor 3 subunit H1	[more]
AT1G10840.2	2.1e-119	82.00	translation initiation factor 3 subunit H1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 24..157 e-value: 9.5E-11 score: 51.7
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 23..126 e-value: 1.5E-13 score: 50.8
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 2..215 e-value: 2.8E-42 score: 146.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..294
None	No IPR available	PANTHER	PTHR10410:SF24	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H	coord: 3..337
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 3..337
IPR027524	Eukaryotic translation initiation factor 3 subunit H	HAMAP	MF_03007	eIF3h	coord: 20..337 score: 43.013527
IPR027524	Eukaryotic translation initiation factor 3 subunit H	CDD	cd08065	MPN_eIF3h	coord: 23..286 e-value: 7.67746E-152 score: 425.527
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 25..158 score: 26.087763

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019335.1	Sed0019335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0042788	polysomal ribosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003743	translation initiation factor activity