Sed0019332 (gene) Chayote v1

Overview


Name	Sed0019332
Type	gene
Organism	Sechium edule (Chayote v1)
Description	calmodulin-like protein 3
Location	LG12: 3830064 .. 3831044 (+)
RNA-Seq Expression	Sed0019332
Synteny	Sed0019332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAAATAGACCTCCGCCATTGAAGCCGGTTACTTCATCTTCTTCATCATCATCAATTTCGATTTTCTCTCTGGTTTAGAACTTCGTTCAAAACCCTAATTTCTCGCCTGAATTTTCTCAGAAACCAAACAGCCTCCACCACATATAGTCATTCCCGTTCTAAAATCCTCCATAACAATTTCCACAATCAATTCCTCTTCTGTTCTGTTCTGTTCTGTTCTCCAAAATCAAATTCCACAGCCGATCCTGCAATGGATCCGACGGAGCTGCGAAAAGTATTCCAGATGTTCGATCGGAACGGCGACGGGCGAATCACGCAGAAGGAGCTGAACGATTCGCTGGAGAATTTGGGGATTTTCATCCCGGACAAGCATCTGACTCAGATGATCGAGAAAATCGACGTGAACCACGACGGATGCGTGGACGTGGACGAGTTCGGAGATCTGTACCAGTCGATCATGGAGGAGCGGGACGAGGAAGAGGACATGAGAGAGGCGTTCAACGTGTTCGACCAGAACGGCGACGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTCGCTTCCTTGGGGCTTAAGCAGGGTAGAACGGTAGAGGATTGCAAGAAGATGATCATGAAAGTGGATGTGGATGGAGATGGAATGGTGAATTACAAGGAGTTTAAGCAAATGATGAAGAGAGGTGGATTTAGTGCATTAGGTTGATGATTAATCACACGCATTCAATCAACATTGATGAGAGATTTTCTTGATTTTTCCATCAGAGTTCTGTATATAGAAAATCTTTGAAGATGATGACGATCATGATGAACCAGAGGTGGTAGAAGAAGAAGAAGGGTGATTTGATCATTACACACAGGTTGCATGCATTGTTTGTGCACTATATTACACGTGTTCATAATACATTGGTTGTTATTATAGCCAATCGCCTTTTGACACATATTCAGATTATCATATATATATATATATATATATATATAT

mRNA sequence

CTTAAAATAGACCTCCGCCATTGAAGCCGGTTACTTCATCTTCTTCATCATCATCAATTTCGATTTTCTCTCTGGTTTAGAACTTCGTTCAAAACCCTAATTTCTCGCCTGAATTTTCTCAGAAACCAAACAGCCTCCACCACATATAGTCATTCCCGTTCTAAAATCCTCCATAACAATTTCCACAATCAATTCCTCTTCTGTTCTGTTCTGTTCTGTTCTCCAAAATCAAATTCCACAGCCGATCCTGCAATGGATCCGACGGAGCTGCGAAAAGTATTCCAGATGTTCGATCGGAACGGCGACGGGCGAATCACGCAGAAGGAGCTGAACGATTCGCTGGAGAATTTGGGGATTTTCATCCCGGACAAGCATCTGACTCAGATGATCGAGAAAATCGACGTGAACCACGACGGATGCGTGGACGTGGACGAGTTCGGAGATCTGTACCAGTCGATCATGGAGGAGCGGGACGAGGAAGAGGACATGAGAGAGGCGTTCAACGTGTTCGACCAGAACGGCGACGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTCGCTTCCTTGGGGCTTAAGCAGGGTAGAACGGTAGAGGATTGCAAGAAGATGATCATGAAAGTGGATGTGGATGGAGATGGAATGGTGAATTACAAGGAGTTTAAGCAAATGATGAAGAGAGGTGGATTTAGTGCATTAGGTTGATGATTAATCACACGCATTCAATCAACATTGATGAGAGATTTTCTTGATTTTTCCATCAGAGTTCTGTATATAGAAAATCTTTGAAGATGATGACGATCATGATGAACCAGAGGTGGTAGAAGAAGAAGAAGGGTGATTTGATCATTACACACAGGTTGCATGCATTGTTTGTGCACTATATTACACGTGTTCATAATACATTGGTTGTTATTATAGCCAATCGCCTTTTGACACATATTCAGATTATCATATATATATATATATATATATATATAT

Coding sequence (CDS)

ATGGATCCGACGGAGCTGCGAAAAGTATTCCAGATGTTCGATCGGAACGGCGACGGGCGAATCACGCAGAAGGAGCTGAACGATTCGCTGGAGAATTTGGGGATTTTCATCCCGGACAAGCATCTGACTCAGATGATCGAGAAAATCGACGTGAACCACGACGGATGCGTGGACGTGGACGAGTTCGGAGATCTGTACCAGTCGATCATGGAGGAGCGGGACGAGGAAGAGGACATGAGAGAGGCGTTCAACGTGTTCGACCAGAACGGCGACGGATTCATCACCGTCGAGGAATTGAGGTCAGTTCTCGCTTCCTTGGGGCTTAAGCAGGGTAGAACGGTAGAGGATTGCAAGAAGATGATCATGAAAGTGGATGTGGATGGAGATGGAATGGTGAATTACAAGGAGTTTAAGCAAATGATGAAGAGAGGTGGATTTAGTGCATTAGGTTGA

Protein sequence

MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVDEFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKRGGFSALG

Homology

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BLAST of Sed0019332 vs. NCBI nr
Match: XP_022145111.1 (calmodulin-like protein 3 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73
Identity = 141/150 (94.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+ERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of Sed0019332 vs. NCBI nr
Match: XP_004152098.1 (calmodulin-like protein 3 [Cucumis sativus] >XP_008453977.1 PREDICTED: calmodulin-like protein 3 [Cucumis melo] >XP_038878708.1 calmodulin-like protein 3 [Benincasa hispida] >KAE8649113.1 hypothetical protein Csa_015095 [Cucumis sativus] >BAI52955.1 calcium-binding EF-hand protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 285.0 bits (728), Expect = 3.7e-73
Identity = 140/150 (93.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+ERDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of Sed0019332 vs. NCBI nr
Match: XP_022979973.1 (calmodulin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 284.3 bits (726), Expect = 6.3e-73
Identity = 139/150 (92.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTEL++VFQMFDRNGDGRITQKEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of Sed0019332 vs. NCBI nr
Match: XP_022932721.1 (calmodulin-like protein 3 [Cucurbita moschata] >KAG6597646.1 Calmodulin-like protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029087.1 Calmodulin-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 140/150 (93.33%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KELNDSLENLGIFIPDK LTQMIEKIDVN+DG VD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM E+DEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of Sed0019332 vs. NCBI nr
Match: XP_023526445.1 (calmodulin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-72
Identity = 138/150 (92.00%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTEL++VFQMFDRNGDGRITQKEL+DSLENLGIFIPDK LT MIEKIDVN DGCVD+D
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTHMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

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BLAST of Sed0019332 vs. ExPASy Swiss-Prot
Match: Q9SRR7 (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.4e-67
Identity = 125/150 (83.33%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MD  EL ++FQMFDRNGDG+IT++ELNDSLENLGI+IPDK L QMIEKID+N DG VD++
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IMEERDEEEDMREAFNVFDQN DGFITVEELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMK GGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

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BLAST of Sed0019332 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.4e-64
Identity = 116/150 (77.33%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTEL++VFQMFD+NGDG IT KEL+++L +LGI+IPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERD-EEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKK 120
           EFG+LY++IM+E D EEEDM+EAFNVFDQNGDGFITV+EL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKRGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMK GGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

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BLAST of Sed0019332 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 2.2e-60
Identity = 113/153 (73.86%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           +DP+EL++VFQMFD+NGDGRIT++ELNDSLENLGI+IPDK LTQMI KID N DGCVD+D
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGDLYQSIMEE-----RDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVE 120
           EF  LY SI++E       EEEDM++AFNVFDQ+GDGFITVEEL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKRGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMK GGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

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BLAST of Sed0019332 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.2e-57
Identity = 105/149 (70.47%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MD  EL +VFQMFD+NGDG+I + EL D  +++GI +P+  + +MI K+DVN DG +D+D
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++EE++EEEDMREAF VFDQNGDGFIT EELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+ GGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]

BLAST of Sed0019332 vs. ExPASy Swiss-Prot
Match: Q9ZR02 (Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-56
Identity = 106/149 (71.14%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MD TEL +VFQMFD++GDG+IT KELN+S +NLGI IP+  LTQ+I+KIDVN DGCVD++
Sbjct: 1   MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIE 60

Query: 61  EFGDLYQSIM-EERDE--EEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDC 120
           EFG+LY++IM E+ DE  EEDM+EAFNVFD+NGDGFITV+EL++VL+SLGLKQG+T+E+C
Sbjct: 61  EFGELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEEC 120

Query: 121 KKMIMKVDVDGDGMVNYKEFKQMMKRGGF 147
           +KMIM+VDVDGDG VNY EF+QMMK+G F
Sbjct: 121 RKMIMQVDVDGDGRVNYMEFRQMMKKGRF 149

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BLAST of Sed0019332 vs. ExPASy TrEMBL
Match: A0A6J1CVD5 (calmodulin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111014628 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-73
Identity = 141/150 (94.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+ERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Sed0019332 vs. ExPASy TrEMBL
Match: D1MWZ5 (Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitCaEFh PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 140/150 (93.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+ERDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Sed0019332 vs. ExPASy TrEMBL
Match: A0A1S3BXJ7 (calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 140/150 (93.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+ERDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Sed0019332 vs. ExPASy TrEMBL
Match: A0A6J1IXV3 (calmodulin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111479505 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 139/150 (92.67%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTEL++VFQMFDRNGDGRITQKEL+DSLENLGIFIPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM+E+DEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Sed0019332 vs. ExPASy TrEMBL
Match: A0A6J1EX62 (calmodulin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111439186 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.7e-73
Identity = 140/150 (93.33%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTELR+VFQMFDRNGDGRIT+KELNDSLENLGIFIPDK LTQMIEKIDVN+DG VD+D
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELNDSLENLGIFIPDKDLTQMIEKIDVNNDGYVDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG+LYQSIM E+DEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMNEKDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMK GGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Sed0019332 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 256.1 bits (653), Expect = 1.7e-68
Identity = 125/150 (83.33%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MD  EL ++FQMFDRNGDG+IT++ELNDSLENLGI+IPDK L QMIEKID+N DG VD++
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IMEERDEEEDMREAFNVFDQN DGFITVEELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMK GGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]

BLAST of Sed0019332 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 244.2 bits (622), Expect = 6.7e-65
Identity = 116/150 (77.33%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MDPTEL++VFQMFD+NGDG IT KEL+++L +LGI+IPDK LTQMIEKIDVN DGCVD+D
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGDLYQSIMEERD-EEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKK 120
           EFG+LY++IM+E D EEEDM+EAFNVFDQNGDGFITV+EL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKRGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMK GGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

[Close]

BLAST of Sed0019332 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 233.0 bits (593), Expect = 1.5e-61
Identity = 113/153 (73.86%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           +DP+EL++VFQMFD+NGDGRIT++ELNDSLENLGI+IPDK LTQMI KID N DGCVD+D
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGDLYQSIMEE-----RDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVE 120
           EF  LY SI++E       EEEDM++AFNVFDQ+GDGFITVEEL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKRGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMK GGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]

BLAST of Sed0019332 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-58
Identity = 105/149 (70.47%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MD  EL +VFQMFD+NGDG+I + EL D  +++GI +P+  + +MI K+DVN DG +D+D
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGDLYQSIMEERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ ++EE++EEEDMREAF VFDQNGDGFIT EELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKRGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+ GGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]

BLAST of Sed0019332 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 220.7 bits (561), Expect = 7.9e-58
Identity = 106/149 (71.14%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MDPTELRKVFQMFDRNGDGRITQKELNDSLENLGIFIPDKHLTQMIEKIDVNHDGCVDVD 60
           MD TEL +VFQMFD++GDG+IT KELN+S +NLGI IP+  LTQ+I+KIDVN DGCVD++
Sbjct: 1   MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIE 60

Query: 61  EFGDLYQSIM-EERDE--EEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDC 120
           EFG+LY++IM E+ DE  EEDM+EAFNVFD+NGDGFITV+EL++VL+SLGLKQG+T+E+C
Sbjct: 61  EFGELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEEC 120

Query: 121 KKMIMKVDVDGDGMVNYKEFKQMMKRGGF 147
           +KMIM+VDVDGDG VNY EF+QMMK+G F
Sbjct: 121 RKMIMQVDVDGDGRVNYMEFRQMMKKGRF 149

The following BLAST results are available for this feature:

BLAST of Sed0019332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145111.1	2.1e-73	94.00	calmodulin-like protein 3 [Momordica charantia]	[more]
XP_004152098.1	3.7e-73	93.33	calmodulin-like protein 3 [Cucumis sativus] >XP_008453977.1 PREDICTED: calmoduli...	[more]
XP_022979973.1	6.3e-73	92.67	calmodulin-like protein 3 [Cucurbita maxima]	[more]
XP_022932721.1	1.4e-72	93.33	calmodulin-like protein 3 [Cucurbita moschata] >KAG6597646.1 Calmodulin-like pro...	[more]
XP_023526445.1	2.4e-72	92.00	calmodulin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0019332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRR7	2.4e-67	83.33	Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1	[more]
Q9LNE7	9.4e-64	77.33	Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1	[more]
O22845	2.2e-60	73.86	Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2	[more]
Q9SU00	2.2e-57	70.47	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]
Q9ZR02	1.1e-56	71.14	Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1	[more]

BLAST of Sed0019332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVD5	1.0e-73	94.00	calmodulin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111014628 PE=4 SV...	[more]
D1MWZ5	1.8e-73	93.33	Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 G...	[more]
A0A1S3BXJ7	1.8e-73	93.33	calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1	[more]
A0A6J1IXV3	3.0e-73	92.67	calmodulin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111479505 PE=4 SV=1	[more]
A0A6J1EX62	6.7e-73	93.33	calmodulin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111439186 PE=4 SV=...	[more]

BLAST of Sed0019332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07490.1	1.7e-68	83.33	ARF-GAP domain 11	[more]
AT1G05990.1	6.7e-65	77.33	EF hand calcium-binding protein family	[more]
AT2G43290.1	1.5e-61	73.86	Calcium-binding EF-hand family protein	[more]
AT4G12860.1	1.6e-58	70.47	EF hand calcium-binding protein family	[more]
AT4G03290.1	7.9e-58	71.14	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01697	PARVALBUMIN	coord: 87..103 score: 44.85 coord: 65..83 score: 13.16 coord: 124..137 score: 49.64
None	No IPR available	GENE3D	1.10.238.10		coord: 3..65 e-value: 1.7E-18 score: 68.4
None	No IPR available	GENE3D	1.10.238.10		coord: 66..145 e-value: 3.4E-25 score: 90.2
None	No IPR available	PANTHER	PTHR10891:SF901	EF HAND CALCIUM-BINDING FAMILY PROTEIN	coord: 1..149
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 1..149
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 78..106 e-value: 4.2E-7 score: 39.6 coord: 41..69 e-value: 0.0027 score: 27.0 coord: 5..33 e-value: 1.7E-4 score: 31.0 coord: 116..144 e-value: 1.8E-5 score: 34.2
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 76..142 e-value: 1.2E-13 score: 51.3 coord: 5..66 e-value: 5.6E-13 score: 49.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 37..72 score: 12.393354
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 74..109 score: 17.358736
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 112..147 score: 15.071314
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 1..36 score: 14.42972
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 5..62 e-value: 4.12389E-14 score: 61.0245
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 82..142 e-value: 1.60646E-16 score: 67.1877
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 50..62
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 125..137
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 14..26
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 87..99
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019332.1	Sed0019332.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding