Sed0019307 (gene) Chayote v1

Overview


Name	Sed0019307
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein ABCI12, chloroplastic
Location	LG04: 33245728 .. 33252265 (-)
RNA-Seq Expression	Sed0019307
Synteny	Sed0019307

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGTGAGATTGTTTTGTAGACTGTTAAGAGGGTTTTTTTGTTAGAAGAATCATTTATCTTTTGAAAAAAGTGAAAACATATTTTCTTGAGACATTTCATCTTTCGTTATTATGGAGAATCGCAACATGTTGGCTTGTAGTATTTTATGCATAAAGTTTGATTTCTCAAAAGGAGGGGATGAAAATGACTAGTAATCTTTTTATTTGGAAAGATGTAAACATGTCTAGACACTTCCAACCATTTTGATCAATTAAAACTCAAGGGGGTGCTCGTTGGTCATATTTAAGGAGGATTACTACTCATTCTCGAAAATCTAAAATAACTCATCGTTTGTAATCATTCATTTATAGTAATTCATTCATAAACCATTTATTTTTAATAATTAATTTCAAACAAATCAAAACAACTCGTTTTTAATTATTCAAAATAACTATTTATTTTAAATTTACATCAAAACAAAATTTTGACTCTATACAAAAATTGCATTTGAATAAAATGTTTGCAAACTAGTAGTTTTGTTTGGTAAATGTTTGTTTAGCGAGGTTTAAATATGTATATCATGTAAATTGGAATCATCAATAAAAAAAAAAAGAGAAAATATTAAAACAGCATTCATTTATTGAGATTGAACTCGTGATCATAGTGTTGAAATAAATTTCAACCAAACAACGAAACTATCAAACCACATACTTTTTCAACCAATGTCGCGGGACATACTAGAAAATTAATTCCTAGATAAGTAGCTATGGATTGAACCCATCACATTAAACACCGAAATATCCTATTTGACCACTTGATCCACTCCATAATTGTCATCACCATTAATTACTGCATACAAGTCGAGTTGTGTTGAGTTAAGAAGAGTTTTTAGACCAATCTAAAATTTAGGATTGATAAATCCATCGATCCATCTAAACATATGTATTTGAACAATCCAATTCAAGTAATTGATTTTTCGGTTCAATTGAGTTCGATCACCAAGATTTTTTATTCGAATACATATTTATTATTTATTATCCGTTTTTATACAAATCAATATAATAATTTCCTTCACGATTCAATTTCAATTTATATCCATATATACCTTCTAAAAACTTAAGAAACTACAAATTAAAAAAGATGTGAAAGAATAAAGAGTCAATCAATAATAATAAAATAAAATAAATATTTACGTATGCAATTATTGTTAGAAAACAATAATAAATTCGAATTATTTATAATCTAACTCAAGCTAATTTCAAGTCTCTAAAAAATTAGCTCGATTAATAAAAATTTCACGAACAAACCCAATTAAAATAAATTTATAATCTTATATCTAAAAAAAAAACTTTATTTTGATAATCATTTAATTTTTGTTTTTTTGTTGGTTTCTAAAGTTTAAACATACGTCAATGATTTCAGTGTTTGATTGTAAACTACACCACATTACAGGTTCAAGCCCGAGATTTAGTATTTGTCAATTTCCCCCCATATATACTAAAAAAAAAAAAAAACTTCAAAAAATTTGTTATTGAATTACAGAAAATGTGAAACCTAAAAAATTCGAGTAAGAATAGATTTAAATATAAAAAAATAAATAGTTATAAAAAACAGATCTCATTACCTATCATCGATTATCGAGTTCGTTGTATGAACGCCCCTAACCCTGAGTTCTATTAGAACGAGAAGATGACGACACGTCGACGAATCTGGCCAAGACGATCTGTCGTCTTATCTACGTTGGAACAAGAGAGCCCACAAAATTGCCGGAAAACGAATTACCGCCACATCCCGGAGAAAATTCCGACGGCGCCGAACAGAGAGATCGCGCTGTCTTCTTCATCGGCTCGTCCTCCATGAACTGTACATACAGTTCTTTTCGACCAGTCGCCTATTCTCTTGCATCTTCTCCCACCCTAGCGGCCCCCAAATTTGCTTCAATTTCAGTCCTAAATTGCGGCAAAGTTGGATTCTGGAAAATCGCACTTAAGCCAGTGGTGAAGACGAGTTTCAGAGTTAAAGCTTCGAAGAGTGACGATGCCGGAACTGAGAAGTGGCTGAAATGGTTACCGAATGGAGCTTTCGCCGCCGATAAAGTTTTGCGGTTGATTGCCGGCGCAACCGCCAGCCCTATCAGTCAGTTCATTTCGTCGCCGGTCACGTTTCTTCACACTGTTGATCCTCGAATCAAATTGGTAAATTAATTTTGTCTGGACTTTCTGGATTCGTGGTTGTATCTCTCAGCTGCATGTTATGGTTGAGAATTTCGTGCTTAGTTTTTTTCCGTCAACATTGGTCGTATTTGGATGAGTAATTTATATCTTTTTTATGCAAAAATATTTGATGTTTGTTGGTTACACAGCTTTATAAGATTGGGGCCTTGGCTAATCATGTTATTTGTAATGGTCCTCTAGAGGAGGCGTAGTGGTTGAGCGCCTCCGCCTTAGGTTATGCTCACTTTGAGTTGACAGGTTTGAGGGTGTCGTGGGGATTAATTTTCCATGTTATCCCAAATTTCACCTCCGTTTCTTAAATTGTCTTCCACTGCCTGGCCTAGAGACGAGCATGGTTGCCTTCGGAGCGGTGAAGCTCCAAGTTCATTGGGTCATTAAAAAAAAAATAATCATGTTATATATAATGAATTTATCCCCTTGAAGTTTGTCCTATATATATATATATATATATATATATTTTTTTTTTTCTTTAATCATTCATGGTTTGTATGTCCTCCCACTGAAATTTTGTTTGATTCTATAAATCACGAGTGACTGCTCATTTCTTTTTGGCAGGTATGGCTTTTGGCTCTCGTTGTCCTACCGGCGAGGTCAAATATCGCTATTCGTTTTGGATTAGTGATTTTCTTGGCTTTCCTATCCATATGGATTCTTCCAACTGAGTTATGGAAGGTACATTTCAATTAAAAGCCACTTATGATCTCTATACTTACAATTAATGGAAATTTAGGTCCTTAGTAATGCTTGTGGTTAACATTTTATTACATTGAAATTTGAATGGAACAATGTGATAATAGAAGAGGGATTCTTGTACTTTTGTAGGACCAACTGGGAAGAGTTTCTCTGCTCTCAGGAATTTTGTTCATCATGTTGGGGCTTGGTGCGGACGGAGTACCATCCCTCCTCCAATCAAGATCTCCTCCACCTGGAATGATGGGATTGCCCGAGCTCCCTGCATCGGTGGGAGGTTACTCTTATTTAATTGCAAAACTTGGCCCTTTAACTTTTACTAGGAAGGGCTTGTCAATAGCTAGCACATCAGCATGTTTAACTTTTGTTGTAAGTTGAATATTCTTATTATTGAATCCACCTTAAATTTTACTTTAGCATTTTATTTGACATAAATGGGCATGGATATGGTAAAAGAAAGTGCAATATAGATAGAATTAGTTGCCTGAAAGGATCTCTGCTCTTGGTTTAATTGTTCTTGAAGGTCTTCCAAAGTGCAAGTCTATGCCTCACAACCACAGCCCCTGAACAACTTGCATTTGCCATACGTTGGTTTATGCTACCTTTGGCGAATTTTGGTGTTCCAGTTGCTGAAATCACCCTTACACTTTTACTTTCTTTGAGATTTGTCAGTCTTGTGTTTGATGAGGTAAGAGATTGTTCTTTTATTTTCTTGAGATAAACTAAAATGATTAATTAATGATAAGTTAATACTGATGATTGATAAATCTTTATTGGAACTGTTAGTGGCGTCCATTGCCTCATTTATTATGTATAATGTATAATGATTTTGTCATCTAAAAAAGGAATTATGTGCTGCCAGGTTCGAAATGTTGCGTTAGGGGTTGTATCCCGCAGGATAAACTGGCAACTATTGACTACAATGGAGACAGTTGACGGTAAGCATCCAGTAACATTGACAACATGTATACATAAAAAGCACAACCTTCTCAATTGAATACTTGTGTAGCATAGGGAAGCTCTTCTCATGTTTGTATGCATAGAAATATTAACTTACCATACATTCAGCATGACACAATGATTCTACCCGGAATCGTATTTTTATCAATCATGTGGAACAGCTTTATCCAAGGAACTTTTGGTGCAGGGGAAATATTTCCCCCAAAACAATTTACTGTGCTAATGCTTCATGGTTTGAAGCATTTCATTTTAGAAATTATGAAGCACTAGGTCGATAATCTTCAAAAGTAACTTCAATGCTACTATGTCTTATTTCATCCCCAAGTGCTTCGGTTTAAAATCATTATATAATTGAAATGCTTAATTTGGTTGCTTTGGTTGGTTGTCCATGCAGTTTTCTTTACTTATCTCCGTCGCATTTTCAAAAATATTTTTAGCCATGCGGAGCAGATTTCTCAGGTAACATATTCACTGCATATTACTAAGTATTTCTTCATTTACTGAGGTGCTTTGTCTGCGTTCTCAAAGTGTTCAATGTTTCTAACTATCAATTTTCTTCTTTCTCTTTTGACCAATTGAAGGATTCCTTCGTAACTCATTTGGTTTGAGCTTTGCCTTCTTTTGTAAATTTCACTGATCAATGATCTTATTTTATTTTATTTTTCACTTAAAAAAGAATAAGATTTGTGATCTCAAAATACCTCAATGTTCTTAGATAAGGTCTTAGTTCTTTTCTTACCCAGGTTAAAAACGTAATTATTTATTAACTTCTCTTGGAGCCAGCCTTAGTTAAAGTGGTCAAAATCTCCCTATAAATTGGGGAAATTTGCAAAAATGAGCCATGACCGATGAGTATAATATGAAGAGTGGAATCCCTTCTTTGATTTTTGAAAGAAAAGAGTAGACACTGGCTATCCCGATCAGAGAACTCTAATTTAACATTGATTTTGTAAATACGACAAGGCTGCTATGGCAAGGACGTGTAAATAATGAGGCAATTTTGTTACCGAATTTTTGCTCTCAATTCTTTATTTTTTTGTTTATGCTATGGATTTTCTTCCAATATACTGGTATTAGTTCATTTATGAGTTGATCAATCGCCTAAGTTTGTATTCTTTTAAGAAATCCATATCGTATAGATTCCTTGAGCTGTTGTAATAAAATTCTAAGAATAGGACTTCATTTGCTAAGCCTTCATTTTTCTGGCCTTTCAGAATTAATTGCCTCGATAACAACCTCACTGTGGATGTTTCTCCATGCCTTTCAACTCATCTTTTGAAATTTTTGTTGAGTTGGACGCTTTTACTTATGTCGAACGAACCTCGATTCAATGATTTATGCTGCAGGCCATGATTGTAAGAGGTTTCAGAGGAGATAGTAGCAGTCATAAGCTGTATTTCTTATCAAGCTCATCAAGCAGAGTGGCAAATATTCTCTCCCTGTTGTGCCTGATTGGTGTCATCAGTGCTTCTTTTTTCTTGGACAAAGTCATCATCTGATATCTACATCCACTTTTTGCCATCTTCTCACTCTGCTAAAGCTGCTGTATGTGAATCTCTCCCTGACTCCATCTAATTAGATCTGCATCATCTAAAGTTAAGGGTTTAGTGTTTGATAACCTTATTGCTTTTGAAGATTTTACTTCTTTTTTGGTTAGTCTTTTCACTCTATTTAAAAACACGTTGGAATTGTGTCTCAAAAAAAAAAAAACACACGTTGGAATTCTAAGCGAAAGCAAACGAAACAAGAACCTTTTTATTTCTTTCAATTTTTGGTTTTTTAAAATAATTTTATATATCTGTGAGTGTCCGGGCTAACTTATACGCACCTCGACTATTCTCATCGGAGATACGGAGATACCACAAGATCCCACAACAATTGGATGTCAAGGAAATCTGTTAGTATTTAAACCTTGGTAGATGCCTAAATCTCCAAGACCCTCTTGATCATTAGTCCACCCCCATGATGGTTAAGTCTTAATTTGATTTTTTGGAAATCAATCATTAAGAGGTGGTGATAAAGCAATAAAACTATATGTGGAGGAAGGATTTGTAAGCTTAATTTTAAAAAATAGAACAAAAAATGGTCATCAAATGGATGTTTGGTATATGAGTTTGAACTTACGACCTTTTGATCTAGGATACATGTCAATTACTGCTAGACTAAGTCCAGTTTAGCTATACTTATAGGTTCATAAAACTCACCCACTCTTACAAATCATTAAAATATAGATTATACAAAACTTAGATTCTTAACATCAATCCTCCTTTATGGCTGTTGCCTTTTATTTCTATTGATATGCATCTTCTATATCTAAAATAAATGATGCATTTCTTAAATTATTAAAAAAAAAAACTTGATATTCGCAATTAATGGAACTTAGAGGTCATGCTTGGTTGCTTTGCAGGTGGAAATAAATACCTTATTGCTCATCCCATGACATTTTCTTATATGGGACATGAAAGTTCATATTCATATGGTGAATGCAAAGGGTGTTCCTCTGCTCCACCCTTGGTTATCTTGTTGAAAGCGAAGGTCTGTTCATTGTTCAGAATCTTTTAACTTTGTTTAATTTTTTAAACAAAAATACAAACTCTTTAGAACTAGTTTCCTGTATTTTGATTTTCCCCCTAAATTTTAAATATGATTTTAAAAAAAAATGTCATAAAAT

mRNA sequence

ATGTTTCTATTAGAACGAGAAGATGACGACACGTCGACGAATCTGGCCAAGACGATCTGTCGTCTTATCTACGTTGGAACAAGAGAGCCCACAAAATTGCCGGAAAACGAATTACCGCCACATCCCGGAGAAAATTCCGACGGCGCCGAACAGAGAGATCGCGCTGTCTTCTTCATCGGCTCGTCCTCCATGAACTGTACATACAGTTCTTTTCGACCAGTCGCCTATTCTCTTGCATCTTCTCCCACCCTAGCGGCCCCCAAATTTGCTTCAATTTCAGTCCTAAATTGCGGCAAAGTTGGATTCTGGAAAATCGCACTTAAGCCAGTGGTGAAGACGAGTTTCAGAGTTAAAGCTTCGAAGAGTGACGATGCCGGAACTGAGAAGTGGCTGAAATGGTTACCGAATGGAGCTTTCGCCGCCGATAAAGTTTTGCGGTTGATTGCCGGCGCAACCGCCAGCCCTATCAGTCAGTTCATTTCGTCGCCGGTCACGTTTCTTCACACTGTTGATCCTCGAATCAAATTGGTATGGCTTTTGGCTCTCGTTGTCCTACCGGCGAGGTCAAATATCGCTATTCGTTTTGGATTAGTGATTTTCTTGGCTTTCCTATCCATATGGATTCTTCCAACTGAGTTATGGAAGGACCAACTGGGAAGAGTTTCTCTGCTCTCAGGAATTTTGTTCATCATGTTGGGGCTTGGTGCGGACGGAGTACCATCCCTCCTCCAATCAAGATCTCCTCCACCTGGAATGATGGGATTGCCCGAGCTCCCTGCATCGGTGGGAGGTTACTCTTATTTAATTGCAAAACTTGGCCCTTTAACTTTTACTAGGAAGGGCTTGTCAATAGCTAGCACATCAGCATGTTTAACTTTTGTTGTCTTCCAAAGTGCAAGTCTATGCCTCACAACCACAGCCCCTGAACAACTTGCATTTGCCATACGTTGGTTTATGCTACCTTTGGCGAATTTTGGTGTTCCAGTTGCTGAAATCACCCTTACACTTTTACTTTCTTTGAGATTTGTCAGTCTTGTGTTTGATGAGGTTCGAAATGTTGCGTTAGGGGTTGTATCCCGCAGGATAAACTGGCAACTATTGACTACAATGGAGACAGTTGACGTTTTCTTTACTTATCTCCGTCGCATTTTCAAAAATATTTTTAGCCATGCGGAGCAGATTTCTCAGGCCATGATTGTAAGAGGTTTCAGAGGAGATAGTAGCAGTCATAAGCTGTATTTCTTATCAAGCTCATCAAGCAGAGTGGCAAATATTCTCTCCCTGTTGTGCCTGATTGGTGTCATCAGTGCTTCTTTTTTCTTGGACAAAGTCATCATCTGATATCTACATCCACTTTTTGCCATCTTCTCACTCTGCTAAAGCTGCTGTGGAAATAAATACCTTATTGCTCATCCCATGACATTTTCTTATATGGGACATGAAAGTTCATATTCATATGGTGAATGCAAAGGGTGTTCCTCTGCTCCACCCTTGGTTATCTTGTTGAAAGCGAAGGTCTGTTCATTGTTCAGAATCTTTTAACTTTGTTTAATTTTTTAAACAAAAATACAAACTCTTTAGAACTAGTTTCCTGTATTTTGATTTTCCCCCTAAATTTTAAATATGATTTTAAAAAAAAATGTCATAAAAT

Coding sequence (CDS)

ATGTTTCTATTAGAACGAGAAGATGACGACACGTCGACGAATCTGGCCAAGACGATCTGTCGTCTTATCTACGTTGGAACAAGAGAGCCCACAAAATTGCCGGAAAACGAATTACCGCCACATCCCGGAGAAAATTCCGACGGCGCCGAACAGAGAGATCGCGCTGTCTTCTTCATCGGCTCGTCCTCCATGAACTGTACATACAGTTCTTTTCGACCAGTCGCCTATTCTCTTGCATCTTCTCCCACCCTAGCGGCCCCCAAATTTGCTTCAATTTCAGTCCTAAATTGCGGCAAAGTTGGATTCTGGAAAATCGCACTTAAGCCAGTGGTGAAGACGAGTTTCAGAGTTAAAGCTTCGAAGAGTGACGATGCCGGAACTGAGAAGTGGCTGAAATGGTTACCGAATGGAGCTTTCGCCGCCGATAAAGTTTTGCGGTTGATTGCCGGCGCAACCGCCAGCCCTATCAGTCAGTTCATTTCGTCGCCGGTCACGTTTCTTCACACTGTTGATCCTCGAATCAAATTGGTATGGCTTTTGGCTCTCGTTGTCCTACCGGCGAGGTCAAATATCGCTATTCGTTTTGGATTAGTGATTTTCTTGGCTTTCCTATCCATATGGATTCTTCCAACTGAGTTATGGAAGGACCAACTGGGAAGAGTTTCTCTGCTCTCAGGAATTTTGTTCATCATGTTGGGGCTTGGTGCGGACGGAGTACCATCCCTCCTCCAATCAAGATCTCCTCCACCTGGAATGATGGGATTGCCCGAGCTCCCTGCATCGGTGGGAGGTTACTCTTATTTAATTGCAAAACTTGGCCCTTTAACTTTTACTAGGAAGGGCTTGTCAATAGCTAGCACATCAGCATGTTTAACTTTTGTTGTCTTCCAAAGTGCAAGTCTATGCCTCACAACCACAGCCCCTGAACAACTTGCATTTGCCATACGTTGGTTTATGCTACCTTTGGCGAATTTTGGTGTTCCAGTTGCTGAAATCACCCTTACACTTTTACTTTCTTTGAGATTTGTCAGTCTTGTGTTTGATGAGGTTCGAAATGTTGCGTTAGGGGTTGTATCCCGCAGGATAAACTGGCAACTATTGACTACAATGGAGACAGTTGACGTTTTCTTTACTTATCTCCGTCGCATTTTCAAAAATATTTTTAGCCATGCGGAGCAGATTTCTCAGGCCATGATTGTAAGAGGTTTCAGAGGAGATAGTAGCAGTCATAAGCTGTATTTCTTATCAAGCTCATCAAGCAGAGTGGCAAATATTCTCTCCCTGTTGTGCCTGATTGGTGTCATCAGTGCTTCTTTTTTCTTGGACAAAGTCATCATCTGA

Protein sequence

MFLLEREDDDTSTNLAKTICRLIYVGTREPTKLPENELPPHPGENSDGAEQRDRAVFFIGSSSMNCTYSSFRPVAYSLASSPTLAAPKFASISVLNCGKVGFWKIALKPVVKTSFRVKASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKLVWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSSSSRVANILSLLCLIGVISASFFLDKVII

Homology

[Close]

BLAST of Sed0019307 vs. NCBI nr
Match: XP_008458540.1 (PREDICTED: protein ABCI12, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 648.7 bits (1672), Expect = 3.8e-182
Identity = 349/421 (82.90%), Postives = 374/421 (88.84%), Query Frame = 0


Query: 38  LPPHPGENSDGAEQ-----RDRAVFFIGSSSMNCTYSSFRPVAYSLAS----SPTLAAPK 97
           +P     NSD  EQ     R+ ++FFI S SM+C YSSF+ +AY+L S      +L +P 
Sbjct: 75  IPAISRRNSDDIEQTKLPKREHSLFFIDSFSMSCLYSSFQTLAYALPSPVHIPKSLVSPI 134

Query: 98  FASISVLNCGKVG---FWKIALKPVVKTSFRVKASKSDDAGTEKWLKWLPNGAFAADKVL 157
             SIS LN GKVG   +WKI LKPV K S  V+ASKSDD GTEKWLKWLPNGA AADK+L
Sbjct: 135 LTSISPLNSGKVGAPVYWKIVLKPVRKRSLEVRASKSDDTGTEKWLKWLPNGALAADKIL 194

Query: 158 RLIAGATASPISQFISSPVTFLHTVDPRIKLVWLLALVVLPARSNIAIRFGLVIFLAFLS 217
           RLIAGATASPISQF+SSPVTFLH+VDPRIKLVWLLALVVLPARSNI IRFGLVIFLA LS
Sbjct: 195 RLIAGATASPISQFVSSPVTFLHSVDPRIKLVWLLALVVLPARSNITIRFGLVIFLAVLS 254

Query: 218 IWILPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRSPPPGMMGLPELPASVGGY 277
           IWILPTELWKDQLGRVS+LSGILF+MLGLGADGVP L+QSR+PPPGMMGLPELPAS+GGY
Sbjct: 255 IWILPTELWKDQLGRVSILSGILFVMLGLGADGVPPLIQSRTPPPGMMGLPELPASLGGY 314

Query: 278 SYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLANF 337
           SYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPL  F
Sbjct: 315 SYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLGYF 374

Query: 338 GVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTYLRRIFK 397
           GVPVAEITLTLLLSLRFVSLVFDEVRNVALG+VSRRINWQ+LTTMETVDVFFTYLRRIFK
Sbjct: 375 GVPVAEITLTLLLSLRFVSLVFDEVRNVALGIVSRRINWQMLTTMETVDVFFTYLRRIFK 434

Query: 398 NIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSSSSRVANILSLLCLIGVISASFFLDKVI 447
           NIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+SSSR+ANILSLLCLIGVISAS F DKVI
Sbjct: 435 NIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRMANILSLLCLIGVISASVFFDKVI 494

[Close]

BLAST of Sed0019307 vs. NCBI nr
Match: XP_022138671.1 (protein ABCI12, chloroplastic [Momordica charantia] >XP_022138672.1 protein ABCI12, chloroplastic [Momordica charantia])

HSP 1 Score: 640.2 bits (1650), Expect = 1.3e-179
Identity = 340/390 (87.18%), Postives = 358/390 (91.79%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASISVLNCGKVG---FWKIALKPVVKTSFR 123
           MNC YSSFR VAY L S      +L AP F S S LN GK G   +W I LKPV KT+ R
Sbjct: 1   MNCPYSSFRTVAYPLPSPIHNPKSLVAPNFTSFSALNSGKFGASVYWNIVLKPVEKTNLR 60

Query: 124 VKASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKL 183
           V+AS SDDAGTEKWLKW+PNGA AADKVLRL+AGATASPISQFISSPVTFLH+VDPRIKL
Sbjct: 61  VRASTSDDAGTEKWLKWIPNGALAADKVLRLVAGATASPISQFISSPVTFLHSVDPRIKL 120

Query: 184 VWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGA 243
           VWLLALVVLPARSNI IRFGLVIFLAFLSIWILPTELWKDQ+GRVSLLSGILF+MLGL A
Sbjct: 121 VWLLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQVGRVSLLSGILFVMLGLSA 180

Query: 244 DGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVF 303
           DGVP L+QSR+PPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLS+AST+ACLTFVVF
Sbjct: 181 DGVPPLIQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSVASTAACLTFVVF 240

Query: 304 QSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 363
           QSASLCLTTTAPEQLAFAIRWF+LPLA FGVPVAEITLTLLLSLRFVSLVFDEVRNVALG
Sbjct: 241 QSASLCLTTTAPEQLAFAIRWFLLPLAYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 300

Query: 364 VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS 423
           VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKL+FLS
Sbjct: 301 VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLFFLS 360

Query: 424 SSSSRVANILSLLCLIGVISASFFLDKVII 447
           SSSSR+ANILSLLCLIGVISAS F DKVI+
Sbjct: 361 SSSSRMANILSLLCLIGVISASVFFDKVIV 390

[Close]

BLAST of Sed0019307 vs. NCBI nr
Match: XP_038876340.1 (protein ABCI12, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 637.5 bits (1643), Expect = 8.7e-179
Identity = 341/390 (87.44%), Postives = 358/390 (91.79%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASISVLNCGKVG---FWKIALKPVVKTSFR 123
           MN  YSSFR VAYSL S       L  P F SIS LN GKVG   +WKI LKPV   SFR
Sbjct: 1   MNFPYSSFRTVAYSLPSPVHIPKALVPPIFTSISALNSGKVGPSVYWKIILKPVGNRSFR 60

Query: 124 VKASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKL 183
           V+ASK+DDAGTEKWLKWLPNGA AADK+LRLIAGATASPISQFISSPVTFLH+VDPRIKL
Sbjct: 61  VRASKNDDAGTEKWLKWLPNGALAADKMLRLIAGATASPISQFISSPVTFLHSVDPRIKL 120

Query: 184 VWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGA 243
           VWLLALVVLPARSNI IRFGLVIFLAFLSIWILPTELWKDQLGRVS+LSGILF+MLGLGA
Sbjct: 121 VWLLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQLGRVSILSGILFVMLGLGA 180

Query: 244 DGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVF 303
           DGVP L+QSR+PPPGM+GLPELP+S+GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVF
Sbjct: 181 DGVPPLIQSRTPPPGMIGLPELPSSLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVF 240

Query: 304 QSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 363
           QSASLCLTTTAPEQLAFAIRWFMLPL  FGVPVAEITLTLLLSLRFVSLVFDEVRNVALG
Sbjct: 241 QSASLCLTTTAPEQLAFAIRWFMLPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 300

Query: 364 VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS 423
           VVSRRINWQ+LTTMETVDVFFTYLRRIFKNIF+HAEQISQAMIVRGFRGDSS+HKLYFLS
Sbjct: 301 VVSRRINWQMLTTMETVDVFFTYLRRIFKNIFTHAEQISQAMIVRGFRGDSSNHKLYFLS 360

Query: 424 SSSSRVANILSLLCLIGVISASFFLDKVII 447
           +SSSR+ANILSLLCL GVISASFF D VII
Sbjct: 361 NSSSRMANILSLLCLFGVISASFFFDNVII 390

[Close]

BLAST of Sed0019307 vs. NCBI nr
Match: XP_023000163.1 (protein ABCI12, chloroplastic [Cucurbita maxima])

HSP 1 Score: 636.0 bits (1639), Expect = 2.5e-178
Identity = 345/388 (88.92%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASISV-LNCGKVGFWKIALKPVVKTSFRVK 123
           MN  Y+SFR V Y L S      +L APKF S+SV LN GKVG WKI LKPV KT F V+
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSVALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 124 ASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKLVW 183
           ASKSDDAG EKWLKWLP GA AADKVLR IAGATASPISQFISSPVTFLH+VD RIKL+W
Sbjct: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 184 LLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADG 243
           LLALVVLPARSNI IRFGLVIFLAFLSIW LPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 244 VPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 303
           VPSLLQSR+PPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 304 ASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 363
           ASLCLTTTAPEQLAFAIRWFMLPL  FGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 364 SRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSS 423
           SRRINW+LLTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+S
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 424 SSRVANILSLLCLIGVISASFFLDKVII 447
           SSRVANILSLLCLIGVISAS F DKVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Sed0019307 vs. NCBI nr
Match: KAG6593925.1 (Protein ABCI12, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 635.2 bits (1637), Expect = 4.3e-178
Identity = 344/388 (88.66%), Postives = 355/388 (91.49%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASIS-VLNCGKVGFWKIALKPVVKTSFRVK 123
           MN  Y+SFR V Y L S      +L APKF S+S  LN GKVG WKI LKPV KT F V+
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 124 ASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKLVW 183
           ASKSDDAG EKWLKWLP GA AADKVLR IAGATASPISQFISSPVTFLH+VD RIKL+W
Sbjct: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRSIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 184 LLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADG 243
           LLALVVLPARSNI IRFGLVIFLAFLSIW LPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 244 VPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 303
           VPSLLQSR+PPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 304 ASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 363
           ASLCLTTTAPEQLAFAIRWFMLPL  FGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 364 SRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSS 423
           SRRINW+LLTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+S
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 424 SSRVANILSLLCLIGVISASFFLDKVII 447
           SSRVANILSLLCLIGVISAS F DKVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Sed0019307 vs. ExPASy Swiss-Prot
Match: Q944H2 (Protein ABCI12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI12 PE=1 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.0e-118
Identity = 217/335 (64.78%), Postives = 267/335 (79.70%), Query Frame = 0


Query: 112 KTSFRVKASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVD 171
           K  F V+A+   D  T  W+  LP     A+ V RLI+ AT SPI QFISSPVTFLH+VD
Sbjct: 57  KRVFIVRATVDGDGKTGNWVNRLPIPGLGAENVFRLISSATGSPIGQFISSPVTFLHSVD 116

Query: 172 PRIKLVWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIM 231
           PRIKLVWLL LVVLPAR+N+ +R GLV+  A LSI +LP ++W DQL RVSLLSGILFI 
Sbjct: 117 PRIKLVWLLTLVVLPARANLVVRLGLVLCTALLSILVLPRQVWIDQLARVSLLSGILFIT 176

Query: 232 LGLGADGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACL 291
           LGLG+DG P +LQSR+PP  +  LP LP S+ GYSY++ KLGPL FTRKGLS+ ST+ACL
Sbjct: 177 LGLGSDGAPPMLQSRTPPSSITSLPNLPMSLSGYSYMLLKLGPLQFTRKGLSVGSTAACL 236

Query: 292 TFVVFQSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVR 351
           TF++FQSAS+CL TT PEQLA A+RWF+ PL   GVPV+EI LTLLLSLRF++LVFDEVR
Sbjct: 237 TFIIFQSASICLATTTPEQLALALRWFLFPLTYIGVPVSEIILTLLLSLRFINLVFDEVR 296

Query: 352 NVALGVVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHK 411
           +V+LG+VSRR+NWQ LT +ET+D+F +++RRIFKNIF HAEQISQAMIVRGFRG+SSSHK
Sbjct: 297 SVSLGIVSRRVNWQQLTVLETLDIFASFIRRIFKNIFRHAEQISQAMIVRGFRGESSSHK 356

Query: 412 LYFLSSSSSRVANILSLLCLIGVISASFFLDKVII 447
           +YF S SS++ A+  S+LCLIGVIS +   +  ++
Sbjct: 357 IYFFSGSSNKFADFASVLCLIGVISTALLSEYFLV 391

[Close]

BLAST of Sed0019307 vs. ExPASy Swiss-Prot
Match: Q8YZH6 (Ycf92-like protein OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr0484 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-32
Identity = 90/261 (34.48%), Postives = 142/261 (54.41%), Query Frame = 0


Query: 155 PISQFISSPVTFLHTVDPRIKLVWLLALVVLPARSNIAIRFGLV-IFLAFLSIWILPTEL 214
           P+  ++  P T+LH +DPR+K +WL++ +   + +N   R  LV + + F  I  +P  +
Sbjct: 8   PLGLYLEQPQTWLHKLDPRVKFIWLMSFLTSYSFANNLWRILLVALLILFTLIARIPRRV 67

Query: 215 WKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRSPP-PGMM----------GLPELPASV 274
           W+ Q+G +  LS  +  +  +  DG+    QSR P  P ++             E   S 
Sbjct: 68  WQQQMGWLLTLSFFVLAIAAISPDGLGVDYQSRLPTNPQVLTQSANTNNSATATEQLKSS 127

Query: 275 GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPL 334
             Y+Y++   GP+  TR+ L +A   + + F V  S +L L TTAPE++   +   M PL
Sbjct: 128 KSYTYVLFHKGPVKVTRRSLDLAVRISTIIFTVIYSTNLYLLTTAPEEITAGVESLMQPL 187

Query: 335 ANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTYLRR 394
             F +PV EITLTL LSLRF+ LV +EV+N+   V++R INW+ L     V V+     R
Sbjct: 188 RRFKIPVTEITLTLTLSLRFIPLVLEEVQNLVRSVMTRAINWKKLGLKGAVKVWMIVAER 247

Query: 395 IFKNIFSHAEQISQAMIVRGF 404
           + +N+   A Q++ AM+VRGF
Sbjct: 248 LLENLLLRASQMASAMMVRGF 268

[Close]

BLAST of Sed0019307 vs. ExPASy Swiss-Prot
Match: Q8G838 (Putative ABC transporter ATP-binding protein BL0043 OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=BL0043 PE=3 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 2.7e-10
Identity = 69/273 (25.27%), Postives = 120/273 (43.96%), Query Frame = 0


Query: 141 ADKVLRLIAGATAS--PISQFISSPV--------TFLHTVDPRIKLVWLLA--LVVLPAR 200
           AD+V+R+   A AS  P++  ++ P         + +H +DPR+K+V  LA    +    
Sbjct: 498 ADRVVRMPIAAPASGGPVTATVTEPAVSSNGPAHSVIHRLDPRVKMVGFLAAMFTMFAVN 557

Query: 201 SNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRSP 260
           +   +  G+ I LA ++           +L  + +L  I  I++ L   GV +L   R+ 
Sbjct: 558 TPTQLALGIAITLAVIA---------AARLNPLRVLESIHPILILLVLMGVVNLFVVRTG 617

Query: 261 PPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAP 320
            P                  +  LGPL+ T +G++IA   AC   +V    ++ LTTT P
Sbjct: 618 TP------------------VVALGPLSITDQGVTIAVLYACRFALVIILGAVFLTTTTP 677

Query: 321 EQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWQLLT 380
             +  A    + PL   G+   EI L + L+LRF+  + DE R +     +R  + +  +
Sbjct: 678 TAMTDAFATLISPLNRLGIHAQEIALVMSLALRFIPTLTDETRAIVDAQSARGGSIETGS 737

Query: 381 TMETVDVFFTYLRRIFKNIFSHAEQISQAMIVR 402
             + +      +  IF     HA+ +S A+  R
Sbjct: 738 LAQRIKAMSAIIVPIFAGTLRHADNLSLALDAR 743

[Close]

BLAST of Sed0019307 vs. ExPASy Swiss-Prot
Match: B8I813 (Energy-coupling factor transporter transmembrane protein EcfT OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=ecfT PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06
Identity = 59/248 (23.79%), Postives = 109/248 (43.95%), Query Frame = 0


Query: 165 TFLHTVDPRIKLVWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLL 224
           + LH  DPR K++  L  +++     I   +G ++   F +I ++ + +    +  +  L
Sbjct: 15  SLLHKADPRTKII--LTFIMMIFIFLINTYWGYLLLTLFTAITVVSSNIPVKFV--LKGL 74

Query: 225 SGILFIMLGLGADGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSI 284
             ILFI++  G   +  +  +                      +I   G L+ T +G+++
Sbjct: 75  KPILFIVVFAGIINIFMIKGT----------------------VIWSWGFLSITYEGINV 134

Query: 285 ASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVS 344
           A   A   F++  +ASL   TT P  L  AI   + PL    VPV EI + + ++LRF+ 
Sbjct: 135 AIKMAIRLFLLIITASLLTYTTTPIALTDAIENLLAPLKRIKVPVHEIAMMMTIALRFIP 194

Query: 345 LVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFR 404
            + DE   +     SR  ++     +E    F   L  +F + F  A++++ AM  R +R
Sbjct: 195 TLLDETDKIIKAQSSRGADFDSGNMIERAKSFIPVLIPLFISAFRRADELATAMEARCYR 236

Query: 405 GDSSSHKL 413
           G     ++
Sbjct: 255 GSEGRTRM 236

[Close]

BLAST of Sed0019307 vs. ExPASy Swiss-Prot
Match: D8MHM9 (Energy-coupling factor transporter transmembrane protein EcfT OS=Leuconostoc gelidum subsp. gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10) OX=762550 GN=ecfT PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-06
Identity = 63/255 (24.71%), Postives = 109/255 (42.75%), Query Frame = 0


Query: 165 TFLHTVDPRIKLV--WLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVS 224
           +++H +DPR K++  ++  +V+L A +     +     +A + +   P +L+ D L  + 
Sbjct: 14  SWIHRLDPRTKMIVTFVYIIVMLWASNWQTYAWTAAFVVAMVKLTDQPFKLYWDGLKPIF 73

Query: 225 LLSGILFIMLGLGADGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGL 284
            L     I+  L   G P                           ++  +GP   T  G+
Sbjct: 74  WLILFTVILQLLFTPGTP---------------------------ILFSVGPFQVTVPGI 133

Query: 285 SIASTSACLTFVVFQSASLCLT-TTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLR 344
            + +    + FV+    S  LT TT P  +A A+   + PL   GVPVAE+ L L ++LR
Sbjct: 134 -LNAIYVMVRFVLIILMSTILTLTTPPTSIANALESLLSPLKKIGVPVAELALMLAIALR 193

Query: 345 FVSLVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVR 404
           FV L+ DE++ +     SR +++     ++        L  +F      A  ++ AM VR
Sbjct: 194 FVPLLMDEMQKIMNAQKSRGMSFSTGGPIKRAKAIIPLLIPLFIGALQRALDLANAMEVR 240

Query: 405 GFRGDSSSHKLYFLS 417
           GF+      K   LS
Sbjct: 254 GFKDAVQRTKYRILS 240

[Close]

BLAST of Sed0019307 vs. ExPASy TrEMBL
Match: A0A0A0KBD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G061750 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 8.2e-183
Identity = 350/427 (81.97%), Postives = 377/427 (88.29%), Query Frame = 0


Query: 32  KLPENELPPHPGENSDGAEQ-----RDRAVFFIGSSSMNCTYSSFRPVAYSLAS----SP 91
           ++    +P     +SDG EQ     R+ ++FFI S SM+C YS F+ +AYSL S      
Sbjct: 64  RIAGKRIPAISRRHSDGTEQTKVPKREHSLFFIDSFSMSCPYSYFQTLAYSLPSPVHIPK 123

Query: 92  TLAAPKFASISVLNCGKVG---FWKIALKPVVKTSFRVKASKSDDAGTEKWLKWLPNGAF 151
           +L +P   SIS L+ GKVG   +W I LKPVVK S  V+ASKSDD GTEKWLKW+PNGA 
Sbjct: 124 SLVSPILTSISPLSSGKVGAPVYWTIVLKPVVKRSLGVRASKSDDTGTEKWLKWIPNGAL 183

Query: 152 AADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKLVWLLALVVLPARSNIAIRFGLVI 211
           AADK+LR IAGATASPISQFISSPVTFLH+VDPRIKL+WLLALVVLPARSNI IRFGLVI
Sbjct: 184 AADKILRSIAGATASPISQFISSPVTFLHSVDPRIKLIWLLALVVLPARSNITIRFGLVI 243

Query: 212 FLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRSPPPGMMGLPELP 271
           FLAFLSIWILPTELWKDQLGRVS+LSGILF+MLGLGADGVPSL+QSR+PPPGMMGLPELP
Sbjct: 244 FLAFLSIWILPTELWKDQLGRVSILSGILFVMLGLGADGVPSLIQSRTPPPGMMGLPELP 303

Query: 272 ASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFM 331
           ASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFM
Sbjct: 304 ASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFM 363

Query: 332 LPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTY 391
           LPL  FGVPVAEITLTLLLSLRFVSLVFDEVRNVALG+VSRRINWQ+LTTMETVDVFFTY
Sbjct: 364 LPLGYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGIVSRRINWQMLTTMETVDVFFTY 423

Query: 392 LRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSSSSRVANILSLLCLIGVISASF 447
           LRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+SSSR+ANILSLLCLIGVISAS 
Sbjct: 424 LRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRMANILSLLCLIGVISASV 483

[Close]

BLAST of Sed0019307 vs. ExPASy TrEMBL
Match: A0A1S3C8N5 (protein ABCI12, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497915 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.8e-182
Identity = 349/421 (82.90%), Postives = 374/421 (88.84%), Query Frame = 0


Query: 38  LPPHPGENSDGAEQ-----RDRAVFFIGSSSMNCTYSSFRPVAYSLAS----SPTLAAPK 97
           +P     NSD  EQ     R+ ++FFI S SM+C YSSF+ +AY+L S      +L +P 
Sbjct: 75  IPAISRRNSDDIEQTKLPKREHSLFFIDSFSMSCLYSSFQTLAYALPSPVHIPKSLVSPI 134

Query: 98  FASISVLNCGKVG---FWKIALKPVVKTSFRVKASKSDDAGTEKWLKWLPNGAFAADKVL 157
             SIS LN GKVG   +WKI LKPV K S  V+ASKSDD GTEKWLKWLPNGA AADK+L
Sbjct: 135 LTSISPLNSGKVGAPVYWKIVLKPVRKRSLEVRASKSDDTGTEKWLKWLPNGALAADKIL 194

Query: 158 RLIAGATASPISQFISSPVTFLHTVDPRIKLVWLLALVVLPARSNIAIRFGLVIFLAFLS 217
           RLIAGATASPISQF+SSPVTFLH+VDPRIKLVWLLALVVLPARSNI IRFGLVIFLA LS
Sbjct: 195 RLIAGATASPISQFVSSPVTFLHSVDPRIKLVWLLALVVLPARSNITIRFGLVIFLAVLS 254

Query: 218 IWILPTELWKDQLGRVSLLSGILFIMLGLGADGVPSLLQSRSPPPGMMGLPELPASVGGY 277
           IWILPTELWKDQLGRVS+LSGILF+MLGLGADGVP L+QSR+PPPGMMGLPELPAS+GGY
Sbjct: 255 IWILPTELWKDQLGRVSILSGILFVMLGLGADGVPPLIQSRTPPPGMMGLPELPASLGGY 314

Query: 278 SYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLANF 337
           SYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPL  F
Sbjct: 315 SYLIAKLGPLTFTRKGLSIASTSACLTFVVFQSASLCLTTTAPEQLAFAIRWFMLPLGYF 374

Query: 338 GVPVAEITLTLLLSLRFVSLVFDEVRNVALGVVSRRINWQLLTTMETVDVFFTYLRRIFK 397
           GVPVAEITLTLLLSLRFVSLVFDEVRNVALG+VSRRINWQ+LTTMETVDVFFTYLRRIFK
Sbjct: 375 GVPVAEITLTLLLSLRFVSLVFDEVRNVALGIVSRRINWQMLTTMETVDVFFTYLRRIFK 434

Query: 398 NIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSSSSRVANILSLLCLIGVISASFFLDKVI 447
           NIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+SSSR+ANILSLLCLIGVISAS F DKVI
Sbjct: 435 NIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNSSSRMANILSLLCLIGVISASVFFDKVI 494

[Close]

BLAST of Sed0019307 vs. ExPASy TrEMBL
Match: A0A6J1CBT1 (protein ABCI12, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009775 PE=4 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 6.5e-180
Identity = 340/390 (87.18%), Postives = 358/390 (91.79%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASISVLNCGKVG---FWKIALKPVVKTSFR 123
           MNC YSSFR VAY L S      +L AP F S S LN GK G   +W I LKPV KT+ R
Sbjct: 1   MNCPYSSFRTVAYPLPSPIHNPKSLVAPNFTSFSALNSGKFGASVYWNIVLKPVEKTNLR 60

Query: 124 VKASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKL 183
           V+AS SDDAGTEKWLKW+PNGA AADKVLRL+AGATASPISQFISSPVTFLH+VDPRIKL
Sbjct: 61  VRASTSDDAGTEKWLKWIPNGALAADKVLRLVAGATASPISQFISSPVTFLHSVDPRIKL 120

Query: 184 VWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGA 243
           VWLLALVVLPARSNI IRFGLVIFLAFLSIWILPTELWKDQ+GRVSLLSGILF+MLGL A
Sbjct: 121 VWLLALVVLPARSNITIRFGLVIFLAFLSIWILPTELWKDQVGRVSLLSGILFVMLGLSA 180

Query: 244 DGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVF 303
           DGVP L+QSR+PPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLS+AST+ACLTFVVF
Sbjct: 181 DGVPPLIQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSVASTAACLTFVVF 240

Query: 304 QSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 363
           QSASLCLTTTAPEQLAFAIRWF+LPLA FGVPVAEITLTLLLSLRFVSLVFDEVRNVALG
Sbjct: 241 QSASLCLTTTAPEQLAFAIRWFLLPLAYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALG 300

Query: 364 VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS 423
           VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKL+FLS
Sbjct: 301 VVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLFFLS 360

Query: 424 SSSSRVANILSLLCLIGVISASFFLDKVII 447
           SSSSR+ANILSLLCLIGVISAS F DKVI+
Sbjct: 361 SSSSRMANILSLLCLIGVISASVFFDKVIV 390

[Close]

BLAST of Sed0019307 vs. ExPASy TrEMBL
Match: A0A6J1KLV0 (protein ABCI12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494448 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 1.2e-178
Identity = 345/388 (88.92%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASISV-LNCGKVGFWKIALKPVVKTSFRVK 123
           MN  Y+SFR V Y L S      +L APKF S+SV LN GKVG WKI LKPV KT F V+
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSVALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 124 ASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKLVW 183
           ASKSDDAG EKWLKWLP GA AADKVLR IAGATASPISQFISSPVTFLH+VD RIKL+W
Sbjct: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 184 LLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADG 243
           LLALVVLPARSNI IRFGLVIFLAFLSIW LPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 244 VPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 303
           VPSLLQSR+PPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 304 ASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 363
           ASLCLTTTAPEQLAFAIRWFMLPL  FGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 364 SRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSS 423
           SRRINW+LLTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+S
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 424 SSRVANILSLLCLIGVISASFFLDKVII 447
           SSRVANILSLLCLIGVISAS F DKVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Sed0019307 vs. ExPASy TrEMBL
Match: A0A6J1EUF1 (protein ABCI12, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436735 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.5e-178
Identity = 344/388 (88.66%), Postives = 355/388 (91.49%), Query Frame = 0


Query: 64  MNCTYSSFRPVAYSLAS----SPTLAAPKFASIS-VLNCGKVGFWKIALKPVVKTSFRVK 123
           MN  Y+SFR V Y L S      +L APKF S+S  LN GKVG WKI LKPV KT F V+
Sbjct: 1   MNVPYNSFRTVTYPLPSPIHVPKSLVAPKFTSLSAALNSGKVGCWKIVLKPVRKTFFIVR 60

Query: 124 ASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVDPRIKLVW 183
           ASKSDDAG EKWLKWLP GA AADKVLR IAGATASPISQFISSPVTFLH+VD RIKL+W
Sbjct: 61  ASKSDDAGAEKWLKWLPKGALAADKVLRGIAGATASPISQFISSPVTFLHSVDSRIKLIW 120

Query: 184 LLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIMLGLGADG 243
           LLALVVLPARSNI IRFGLVIFLAFLSIW LPTELWKDQLGRVSLLSGILFIMLGLGADG
Sbjct: 121 LLALVVLPARSNITIRFGLVIFLAFLSIWTLPTELWKDQLGRVSLLSGILFIMLGLGADG 180

Query: 244 VPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 303
           VPSLLQSR+PPPGMMGLPELPAS+GGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS
Sbjct: 181 VPSLLQSRTPPPGMMGLPELPASLGGYSYLIAKLGPLTFTRKGLSIASTSACLTFVVFQS 240

Query: 304 ASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 363
           ASLCLTTTAPEQLAFAIRWFMLPL  FGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV
Sbjct: 241 ASLCLTTTAPEQLAFAIRWFMLPLVYFGVPVAEITLTLLLSLRFVSLVFDEVRNVALGVV 300

Query: 364 SRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSSS 423
           SRRINW+LLTTME+VDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLS+S
Sbjct: 301 SRRINWELLTTMESVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHKLYFLSNS 360

Query: 424 SSRVANILSLLCLIGVISASFFLDKVII 447
           SSRVANILSLLCLIGVISAS F DKVII
Sbjct: 361 SSRVANILSLLCLIGVISASVFFDKVII 388

[Close]

BLAST of Sed0019307 vs. TAIR 10
Match: AT3G21580.1 (cobalt ion transmembrane transporters )

HSP 1 Score: 426.8 bits (1096), Expect = 2.2e-119
Identity = 217/335 (64.78%), Postives = 267/335 (79.70%), Query Frame = 0


Query: 112 KTSFRVKASKSDDAGTEKWLKWLPNGAFAADKVLRLIAGATASPISQFISSPVTFLHTVD 171
           K  F V+A+   D  T  W+  LP     A+ V RLI+ AT SPI QFISSPVTFLH+VD
Sbjct: 57  KRVFIVRATVDGDGKTGNWVNRLPIPGLGAENVFRLISSATGSPIGQFISSPVTFLHSVD 116

Query: 172 PRIKLVWLLALVVLPARSNIAIRFGLVIFLAFLSIWILPTELWKDQLGRVSLLSGILFIM 231
           PRIKLVWLL LVVLPAR+N+ +R GLV+  A LSI +LP ++W DQL RVSLLSGILFI 
Sbjct: 117 PRIKLVWLLTLVVLPARANLVVRLGLVLCTALLSILVLPRQVWIDQLARVSLLSGILFIT 176

Query: 232 LGLGADGVPSLLQSRSPPPGMMGLPELPASVGGYSYLIAKLGPLTFTRKGLSIASTSACL 291
           LGLG+DG P +LQSR+PP  +  LP LP S+ GYSY++ KLGPL FTRKGLS+ ST+ACL
Sbjct: 177 LGLGSDGAPPMLQSRTPPSSITSLPNLPMSLSGYSYMLLKLGPLQFTRKGLSVGSTAACL 236

Query: 292 TFVVFQSASLCLTTTAPEQLAFAIRWFMLPLANFGVPVAEITLTLLLSLRFVSLVFDEVR 351
           TF++FQSAS+CL TT PEQLA A+RWF+ PL   GVPV+EI LTLLLSLRF++LVFDEVR
Sbjct: 237 TFIIFQSASICLATTTPEQLALALRWFLFPLTYIGVPVSEIILTLLLSLRFINLVFDEVR 296

Query: 352 NVALGVVSRRINWQLLTTMETVDVFFTYLRRIFKNIFSHAEQISQAMIVRGFRGDSSSHK 411
           +V+LG+VSRR+NWQ LT +ET+D+F +++RRIFKNIF HAEQISQAMIVRGFRG+SSSHK
Sbjct: 297 SVSLGIVSRRVNWQQLTVLETLDIFASFIRRIFKNIFRHAEQISQAMIVRGFRGESSSHK 356

Query: 412 LYFLSSSSSRVANILSLLCLIGVISASFFLDKVII 447
           +YF S SS++ A+  S+LCLIGVIS +   +  ++
Sbjct: 357 IYFFSGSSNKFADFASVLCLIGVISTALLSEYFLV 391

The following BLAST results are available for this feature:

BLAST of Sed0019307 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458540.1	3.8e-182	82.90	PREDICTED: protein ABCI12, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_022138671.1	1.3e-179	87.18	protein ABCI12, chloroplastic [Momordica charantia] >XP_022138672.1 protein ABCI...	[more]
XP_038876340.1	8.7e-179	87.44	protein ABCI12, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_023000163.1	2.5e-178	88.92	protein ABCI12, chloroplastic [Cucurbita maxima]	[more]
KAG6593925.1	4.3e-178	88.66	Protein ABCI12, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0019307 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944H2	3.0e-118	64.78	Protein ABCI12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI12 PE=1 SV=...	[more]
Q8YZH6	1.1e-32	34.48	Ycf92-like protein OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=10...	[more]
Q8G838	2.7e-10	25.27	Putative ABC transporter ATP-binding protein BL0043 OS=Bifidobacterium longum (s...	[more]
B8I813	1.8e-06	23.79	Energy-coupling factor transporter transmembrane protein EcfT OS=Ruminiclostridi...	[more]
D8MHM9	3.1e-06	24.71	Energy-coupling factor transporter transmembrane protein EcfT OS=Leuconostoc gel...	[more]

BLAST of Sed0019307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBD7	8.2e-183	81.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G061750 PE=4 SV=1	[more]
A0A1S3C8N5	1.8e-182	82.90	protein ABCI12, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497915...	[more]
A0A6J1CBT1	6.5e-180	87.18	protein ABCI12, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009775 PE=...	[more]
A0A6J1KLV0	1.2e-178	88.92	protein ABCI12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494448 PE=4 S...	[more]
A0A6J1EUF1	3.5e-178	88.66	protein ABCI12, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436735 PE=4...	[more]

BLAST of Sed0019307 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21580.1	2.2e-119	64.78	cobalt ion transmembrane transporters	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003339	ABC/ECF transporter, transmembrane component	PFAM	PF02361	CbiQ	coord: 164..375 e-value: 1.8E-14 score: 53.9
None	No IPR available	PANTHER	PTHR33514	PROTEIN ABCI12, CHLOROPLASTIC	coord: 261..409
None	No IPR available	PANTHER	PTHR33514:SF13	PROTEIN ABCI12, CHLOROPLASTIC	coord: 261..409
None	No IPR available	PANTHER	PTHR33514	PROTEIN ABCI12, CHLOROPLASTIC	coord: 89..262
None	No IPR available	PANTHER	PTHR33514:SF13	PROTEIN ABCI12, CHLOROPLASTIC	coord: 89..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019307.1	Sed0019307.1	mRNA
Sed0019307.2	Sed0019307.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane