Sed0019228 (gene) Chayote v1

Overview
NameSed0019228
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG09: 33318457 .. 33325987 (+)
RNA-Seq ExpressionSed0019228
SyntenySed0019228
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACTTGAACTTTGCGAAAGATTTCAAGCTGAAGAACGAAGTGGTGAATCTCAACTCTCCTCACAAGGGGGGATGCCCACAACCCTTGTTAAGGGCTCTTATCAATGCACCAATTCCTCTTTCTCCTACGATAATTTAGACCTTGATTATTGCTCCTATCCTTGCAACTCTTCCCTGCTTGATTCTCCTGTGTTTGAAAAGGCTTTAACCCTCCATGTTTGACTCCTTCACAAACCTTGGAGGCATTTTTTAAGGCCTTAGAAGAATTTGATCCTCTCATCCTACTTTTGAAGGTTGATACGATTGTTAGAACAACAAACTCAGAGCTGTATGATGGTGAAGTACCTGCCTTGACAGAAGGTTATTCTAGCCCTAAGGTGTTTGAAGATGATTACCAAAATGCCTTGGCCCTTCCCTCCTCTCTATGATTGTTTGTTTGTATGAGCTGTATAAGCTGTAGGATTGCTTGTTTGTATAGGATGCTTTTGTTTAGTCTGTTTTTGTCTCTTTAGACACCAATTTTATGGTCCCATGATTGCCCTTCCCTTCTCTCTATGTTCTATTCTCTTTCTCCCTCCCACTATGTTTCTTGACGCGTTTGTATTTGTAGTCAAGAGTAATTGTACTAAAAACAGTCTATTTTATTCATCGATAGTCAATGCCTTTATATAGGGATTACAACGGGCCTAACGGGCTTCATACTAATAGTATAATAAACTATACAAATATACATTTATATTCTAATACTCCCCCTCAAGCTGGAGCGAATATATCTATCATGCCCAACTTGTTACAGAGATAACTTATCCGAGCGCCATTTAATGCTTTGGTGAAGATGTCACCCAACTGTTCTCTTGTCTTCACATAACCTGTCGAAATCAATCCTTGTTGTATCTTTTCGCGAATAAAATGACAATCCACTTCAATATGCTTAGTTCTCTCGTGAAACACCGGGTTAGAGGCGATATGGATTGCTGCTTGATTATCACACCATAGCTTAACAGGTGTAGCGACTTTCATTCCAATTTCGTCAAGAAGTTGGGTCAGCCATACTATCTCACATGTCACCTGTGACATAGCTCTATATTCTGATTCGGAACTCGAACGAGACACCACGTTCTGTTTCTTACTTCTCCAAGAAACCAGATTACCCCCCATAAACACACAGTAACCCGAGGTTGACCGTCTGTCCTCTTTAGGCCCTGCCCAATCAGCATCTGAGAAACACTCAATATTTGAATGACCATGGTTCTCATACAAAACCCCATTCCCAGGAGCAAACTTAAGGTAGCCTAGAATTTGTTCAACAGCTGTCCAATGTTCAACTGTGGGAGATGACATGAATTGACTCACGATACTCACAGAATAGGCAATATGCGGTCTCGTAACAGTCAAGTAATTTAGTTTTCCAACCATCTTCCTGTATCTCTCGGGATCAGGGTATGCTACACCCTCCTTAACAAGTTGTTGATTTGGTACCATTGGGGTACTACATGGTTTCATTCCTAGCTTTCCAGTTTCAATCAACAAATCAAGAACATACTTCCTTTGTGACAGGAAAATTCCCTTCTTGCTTCTCATTGTTTCGATGCCCAGAAAATATTTTAGAGTTCCGAGATCTTTAGTACTAAATTGACTATGAAGGAATACCTTTAATGAGGACATTCCTGAATCATGGCTTCCAGTAATCACGATGTCTTCAACATATACCACCAGCAACACAACCCCATGTTCAGACTGACGGAAAAATACAAAATGATCAGATGAACACTTTTTCATCCCAAACTTCTCAAGAACTTGACTAAACTTCCCAAACCATGCACGAGGGCTTTGTTTTAAGCCAAATAACATGATTTTCGGAGGTGACAGACCTTGGCATTCTCCCCCCCTGAGCAACAAAACCAGGTGGTTGCTCCATATAAACTTATTCTAGAAGATCACCATGTAGAAACACATTCTTAACATCAAGCTGATACAATGGCCAATCATTCATGGCTGCTAGAGAAACAAACAGGTGAATTGACGACATCTTCGCAACAGGAAAGAACGTCTCACTATAATAAACCCCATAAGTCTGAGCATACCCCTTCGCAACCAAGCGGGCTTTGAGACGACCAACCGACCCATCAGCATTCATCTTGACCGCAAATACCCACTTACATCCTATGGTTTGTTTTCCCGCGGGATGAGCTACTAGTTCCCAAGTGTCATTCGCATCCAATGCAGCCACCTCCTCCACCATGGCCTGGTGCCATCATGGATGTGACAAGGCTTCACGAGTATTTTGAGGAACTTTCATAAAATCAAGTGAAGTAAGAAACGAAAAAGAAGAAGAAGACAACTGACGATATGACACACATGAAGAGATAAGATATGTACAAGAACGTTTACCTTTCCGAAGGGCAATGGGCAAGTCTAGATCATTACTGGCCTGCGAATCAGATGAAGAAGAATCCACAGGTACGGGGCATGTCTCCGAGGGTCGTGGACGCCGGGTATAGACCTGAGTAAGAGAAGGTCTCGACGGAACAGGTGGTAGTTGAGGAGGCAAGTCGGGAGAAGACACGACTTCATATATGAGCAAATCATCCTCCATAGGTGGAGAATGTTCCCCAGAACGAAACAAAGTATCCTAAAAAAAGTGACATCAGAGGAATTGACATACCGGTTTGTGCTTGGGCAATAACACCAATAACCCTTCTGGACACGAGAATACCCCAAGAAAATACATTTCAGAGACTTCGGATCCAACTTAGTCCTGTGAGGACGAATATCGCGAACAAAAGACGTACACCCAAAGATCTTAGGCAGAAGAGGAAACATTTCCTTAGAAGGACACAAAACCCAGAAAGGGATCTTATTTTCAAGAATGGACGACGACATTCGATTTGTGAGAAAGCACGCAGTAGACACGGCATCAACCCTAAAATGTCGTGGAACATGCATCTGGAATGACAAAGCTCGAGCGGTTTCCAGAAGATGTCTGTTCTTACGCTCAGCCACACCATTTTGAGATGGTGTATCTGCATAAGAAGATTGGTGAATAATACCTTTTTCACGGAGGTAGAAACTAAGGTTACCCAAAAAATATTCACCCTCATTATCAGTGCTCAAAATTTTGATGGACGCATTAAATTGATTACGGACTTCAGCATTAAAGGCACAAAAATGAGAAACTAACTCAGAACGATTCTTCATTAAATAAACCCAAGTGTATCTAGAAAAATCATCAACAAAAGTAACAAAGTAACGAAATCTTGTTTTAGATGTGATAGGACTCGGACCCTATACATTAGAATGAACCAACTCGAAAGGAGCATCCGCTCGTTTATTGATCCTAGGACTAGAACTCAATCTATGAAACTTAGCAAATTGACATGACTCACAATTTAAAGATGAAACTTTACTGAATTCAGGAAATAATTTCTTCAAAACAGACAAACAGGGATGACCCATCCGGCAATGAATCTCAAACAAGGATGCAGAACTTGCACAAGTTACCGCTGTAACTGGCAGTTGGTCCAAGATATAGAGACCCCCTTCTACATTCCCCCTACCAATAGTCTTCTTCGTCAAATGATCCTGAAACAAGCAATAATTCGGGAAAAAGGAAACAAAGCAACGTAAGTCTCGGGATATCTGACTAACAGAAATTAAGTTATACGAGAATGTAAGGAGACACAAACAGAAGACAATGACAAGGTGGGGGTAAGAGTGATTGATCCCGCCCCTTGGACATGAGACAAAGATCCATCAGCCAAGGTAACACTAGGAAAATGGTCAGGCGACAACGGAGTAGAAAACAAATTGTTGTTACCTGTCATATGAGCAGTCGCCCTAGAGTCAATGACCCACTTCGTAGACGACGAAAGAAGACAGTGATTGTTACTGTTTCAACATGGTCACAAAGAGTGTGAATTCGGAGGATGATGGTCGTGATGAAGTAGAAGACACCAGGAGTTTAGCAAACTCATCAACATTGGTTTGCTCATTAGATACAACATTGGCTTTCTGATGCTTCTGATTATCATATTGCAGTTTTATGCTATCCCGTTTTAAGTGACCTGGTTTCTGACAGTAATAACAGGTCACTCCCACTCGAGAATCTTGGCGTCGATCAGAACCAGGTTTCAATACGGGAGTACTCATATTTCTCCCACCACGGAGGTCACTTCTCCCAAGCAAAGCACTATTGGACTGTTCAATCAAATTCACCTCTGTTCGTTGTAGTCGACGAAACACATCATCCCATGATGGTAGTTCAGTTCCAAACATTATTTGAGACTTGGCATTCTCATATTCCGGACCCATACCATGTAGGAAGCTGATAACTCCCATCTTTTCTTTTTGAGTCTGTTGAACCGCAATATCGGCACTGAAAGGCATAAGAGAATTTAACTCAGCACTATTCCGCTTGTGCTTCGTGTAGTAGGCCATCAATGTCTCACCATTCTGATCAACATGAAAGTAGGACGAACAAACGTCATACGTCCTCGTTACTTGTTCCTTCCCGGAGTACAGAAACTCCACATACGTCATAAGTTGTTTTACTGTAGTGCAATGACTAACAAGATCCACAATTTCGTCATTCATCGAGTTAGTAATCTGATTATACAGACGTGCATCAACCCGGTCCCACTTTTTCTTCTCAACTTCTTCTTTAGGCGGTTCATCATCCATGTGTCCTTCTAATTCATTACTCAACACGTGATTGCGAATCGTCCGATTCCAATCTAGATAATTAGTGCCATTTAACTTCCTTTTCGTGATTTCCATTGAATGCGAAATCACACTTGTTTGCTTAAAATCTGCCATGTATACTTAGCGAAAAAGGTAGAACAAACAGCCCAAAACAGTCTCAAAACAGCCCTTCAAGCAGTGAAATTTTTAAAAAATAGCTCCTTAAAACAGTAAAGCAAAACAAACCCGAGAGGTTTCCGAGCAATCCCACCGTTGGATCGAGTTGAAACCTGGACAGACTTAAACTACTCCTCGGCGCGAGCAAAACCCACAGAAAAAATTCTCGATCGGAGCGTTGACGGCAGCGGCGATTTTCAGCTCGCGGAAGGTTCCGGCGGCGCGTGCGGCTTCGTTTTGGACCGAACGAAGTCGCGGCTTCCACGACCGTATAGATCGGCGACTGGGCTGCCATTTTCCGATGGCTGTGACGGTCAACGGCGGCGGCGGCGGCGGCGGTCTACCCGAAAAAGCCTAAAAAAAAAAAATCTCAACCCTAACTGGTCTCTGATACCATGTAGTCAAGAGTAATTGGACTAAAAATAGTCTATTTTATTCATCGATAGTCAATGCCTTTATATACGGATTACAACGGGCCTAATGGGCTTCATACTAATAGTATAATAAACTATACAAATATACATTTATATTCTAATAGTATTTTCATTTGATCTATGAAAGTCTCTTGCTTCTTAACAATTTTCTTTTAAACCACAATTCATGTTATTGGGTTGATTGGTGGTTTGACATGATTTTAGAGCAAGAGGTCCCAAACAAACTTCTGTCAAGTCATTTCATCTTCAATTAAAATTTATTTCTAATGGACATTTTCAAAATTTTCAAGCTCGGGTAGCGTTAGTTGATATAATTAAATTTAAATCTACGTGTTTAAACTTTTGGGTTGATTTATATTTATAAATTATCATATTTGTTTTTTGTGTAATAGGTTTGGGCATATGAAACTATATCATCTTTGAGTATTCATGTTGCCAAAATGTTAAATGATACTTCAATCCCACGCATTCTTCCGTGGTTTTCTTCACACTCGCCTTCATTTGGGATTCTTGAAAAGAAGATTTTTGCATGCATGGTTAGTGTCACTAAAGATGTTGGTTTATCTACTTATTATATTGGTTTATCTATGTGTTATATGTTGGTTTATCCATGAATTTTGTTAACTTATAGATGGATGTTAAACAAGTGCTCAAGATGACTGAAAATGAAAAGCAAGCCATTGATGCAATTAAGAGTTTGATATCTTCCCCACCTTTTTTTAGGCACAATATGGCTCATCAAGAAGAAATGGAGCATCTAGAAGTAGAGCCTAGAGAAGAACCCATTGTGGATGATGAGTCCTCTTCCTTTTATGGGAAGGATGAAACTCCCAAGAAAAAAAGGAGGATAAAACCAAAACATAAATTGAGGTTGAAGTTATTCAAGCATATTTACTTCAAGTGCACAAAGAAAACTAGGATAAAAGTTTTAGAAGATGACATGAAATGCCTAAAGGAGGACATGAAATGTCTAAAGGAGAACATGTTATCCACCCTCTTAAGTATGGAGAAGCATTTTCGTAAGGTATGTAAATATTCAAGGTGTGTTTGGCATGTTTTTGACATAAATGTTTTTAAGGGAAGAACTTATTTTATATTAGATAATACGAAGTTCCACCTCAAAACTTTCGATTCGACTCAAGCAGGTAAAACTTAAGCAGGTGATTTAGACCACACCCAAGCGGGCAAAAATTAAGCGGGTATTTGATCCCAAAAGTTTGGATCCAACCTAAGCAAGTAAGCCAAAACAGGTATTTCGGTCTACAAATTCGAATCTAAATCAAGATGATCTTTCCCAATATGGTACCATCTTGAGGGGGCATATTAGAGATACTCATCTTGTTCAACATTGAAAAGATGAGAAGTCTTCAACGTATAAGAGATATGGGCTACTCCTCTCACTACCAATTGGTTTTGAGATGAAACCCTGTTCTAACTAATTTTCTTTCAAAAGTGTTTATTAATGTTTAATTATAGTGCCCTTTATCGTCTTTTCACATGTACACAACTACGGCAATCTTGTATATTTGTACATAAACTCCGCTAATGAATAGAATGTGACACATTGTTTCTCTCAACTTTAACGTTTACAATTTAAAACCACGTTAACTGCTTTTTTTCTATTACAAGCATTTCTCGAATCATTTATAAGCATTTTAGAAAGCATGTTTAGTATTTTTTTTCATAATTTTATATTACTATTTAGAGACATGTTTGAGAGTGACTTTAGCATCTATCATTTTTTTCATTACCTCAACCACTCTGTTAAAAAATAGTGATGTTTGGCAATAGAAGTGATTATGAAAAATCCAAAGTTTTCTTTATTCTTATCCAATCACTTGGTTAAGTTGATTAGTAGTGGTGAATTTCAGTTAAGTGATTGCTCGTGAATCCCTTAAGAAAACAACCATTTCTTGAAAGGTGATCTTTTTGTAGTAGTTTGATGATTCCAATTGGTTACATTAAAATGGCTTTTTGTGTGGAACAAAATATTGAAAGTTATTTATTCTTTAACACTTTTTGTTAGATCTCTTATCACTTGATCAGTTTTGCTCCTAAACACACCATAAACGTTCTTTCGAACATATTATATGCTTAAAATAGGATCAGGAGGTGGATGATGAGCAAGATCTAGACCATATTCAGTTTGGTGGCTTAAACATCAATCCCTTAGAAGAGGTGAAAGAAGCAAATAACATTGGAGAAACATTCATGGAAGGGCTAAATGAAACTTAA

mRNA sequence

ATGAACAACTTGAACTTTGCGAAAGATTTCAAGCTGAAGAACGAAGTGGTTGATACGATTGTTAGAACAACAAACTCAGAGCTGTATGATGGTGAAGTACCTGCCTTGACAGAAGGTTATTCTAGCCCTAAGGTTTGGGCATATGAAACTATATCATCTTTGAGTATTCATGTTGCCAAAATGTTAAATGATACTTCAATCCCACGCATTCTTCCGTGGTTTTCTTCACACTCGCCTTCATTTGGGATTCTTGAAAAGAAGATTTTTGCATGCATGATGGATGTTAAACAAGTGCTCAAGATGACTGAAAATGAAAAGCAAGCCATTGATGCAATTAAGAGTTTGATATCTTCCCCACCTTTTTTTAGGCACAATATGGCTCATCAAGAAGAAATGGAGCATCTAGAAGTAGAGCCTAGAGAAGAACCCATTGTGGATGATGAGTCCTCTTCCTTTTATGGGAAGGATGAAACTCCCAAGAAAAAAAGGAGGATAAAACCAAAACATAAATTGAGGTTGAAGTTATTCAAGCATATTTACTTCAAGTGCACAAAGAAAACTAGGATAAAAGTTTTAGAAGATGACATGAAATGCCTAAAGGAGGACATGAAATGTCTAAAGGAGAACATGTTATCCACCCTCTTAAGTATGGAGAAGCATTTTCGTAAGGATCAGGAGGTGGATGATGAGCAAGATCTAGACCATATTCAGTTTGGTGGCTTAAACATCAATCCCTTAGAAGAGGTGAAAGAAGCAAATAACATTGGAGAAACATTCATGGAAGGGCTAAATGAAACTTAA

Coding sequence (CDS)

ATGAACAACTTGAACTTTGCGAAAGATTTCAAGCTGAAGAACGAAGTGGTTGATACGATTGTTAGAACAACAAACTCAGAGCTGTATGATGGTGAAGTACCTGCCTTGACAGAAGGTTATTCTAGCCCTAAGGTTTGGGCATATGAAACTATATCATCTTTGAGTATTCATGTTGCCAAAATGTTAAATGATACTTCAATCCCACGCATTCTTCCGTGGTTTTCTTCACACTCGCCTTCATTTGGGATTCTTGAAAAGAAGATTTTTGCATGCATGATGGATGTTAAACAAGTGCTCAAGATGACTGAAAATGAAAAGCAAGCCATTGATGCAATTAAGAGTTTGATATCTTCCCCACCTTTTTTTAGGCACAATATGGCTCATCAAGAAGAAATGGAGCATCTAGAAGTAGAGCCTAGAGAAGAACCCATTGTGGATGATGAGTCCTCTTCCTTTTATGGGAAGGATGAAACTCCCAAGAAAAAAAGGAGGATAAAACCAAAACATAAATTGAGGTTGAAGTTATTCAAGCATATTTACTTCAAGTGCACAAAGAAAACTAGGATAAAAGTTTTAGAAGATGACATGAAATGCCTAAAGGAGGACATGAAATGTCTAAAGGAGAACATGTTATCCACCCTCTTAAGTATGGAGAAGCATTTTCGTAAGGATCAGGAGGTGGATGATGAGCAAGATCTAGACCATATTCAGTTTGGTGGCTTAAACATCAATCCCTTAGAAGAGGTGAAAGAAGCAAATAACATTGGAGAAACATTCATGGAAGGGCTAAATGAAACTTAA

Protein sequence

MNNLNFAKDFKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSPKVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQVLKMTENEKQAIDAIKSLISSPPFFRHNMAHQEEMEHLEVEPREEPIVDDESSSFYGKDETPKKKRRIKPKHKLRLKLFKHIYFKCTKKTRIKVLEDDMKCLKEDMKCLKENMLSTLLSMEKHFRKDQEVDDEQDLDHIQFGGLNINPLEEVKEANNIGETFMEGLNET
Homology
[Close]
BLAST of Sed0019228 vs. NCBI nr
Match: XP_022156879.1 (putative F-box protein At4g17565 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-05
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 44  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF-ACMMDVKQVLKMT 103
           KVW YETIS+LS+ VA  L+D  IPR+L W  ++S  F +L   +F      VK+ L++T
Sbjct: 372 KVWVYETISTLSVRVATRLSDDVIPRLLRWSCTYSRGFRVLASDVFDNTRSKVKEYLELT 431

Query: 104 ENEKQAIDAI 113
           + ++Q +D I
Sbjct: 432 DAKQQHMDRI 441

[Close]
BLAST of Sed0019228 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-05
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 44  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQV-LKMT 103
           +VWAYETIS+LS  VA  LND +IPR+L W  ++S +F +LE+++F  +     V L+ T
Sbjct: 19  QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 78

Query: 104 ENEKQ 108
           + E+Q
Sbjct: 79  DVERQ 83

[Close]
BLAST of Sed0019228 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-05
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0 

Query: 10  FKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSP---KVWAYETISSLSIHVAKMLNDTS 69
           + LKN + D +         D         Y  P   +VWAYETIS+LS  VA  LND +
Sbjct: 198 WSLKNALKDKVEXYKQKVAMDSSHVETYSLYXFPYAFQVWAYETISTLSTRVALRLNDDA 257

Query: 70  IPRILPWFSSHSPSFGILEKKIF 90
           IPR+L W  ++S +F +LE+++F
Sbjct: 258 IPRLLRWSCTYSRAFNVLEREVF 280

[Close]
BLAST of Sed0019228 vs. ExPASy TrEMBL
Match: A0A6J1DUW8 (putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-05
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 44  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF-ACMMDVKQVLKMT 103
           KVW YETIS+LS+ VA  L+D  IPR+L W  ++S  F +L   +F      VK+ L++T
Sbjct: 372 KVWVYETISTLSVRVATRLSDDVIPRLLRWSCTYSRGFRVLASDVFDNTRSKVKEYLELT 431

Query: 104 ENEKQAIDAI 113
           + ++Q +D I
Sbjct: 432 DAKQQHMDRI 441

[Close]
BLAST of Sed0019228 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-05
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0 

Query: 10  FKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSP---KVWAYETISSLSIHVAKMLNDTS 69
           + LKN + D +         D         Y  P   +VWAYETIS+LS  VA  LND +
Sbjct: 198 WSLKNALKDKVEXYKQKVAMDSSHVETYSLYXFPYAFQVWAYETISTLSTRVALRLNDDA 257

Query: 70  IPRILPWFSSHSPSFGILEKKIF 90
           IPR+L W  ++S +F +LE+++F
Sbjct: 258 IPRLLRWSCTYSRAFNVLEREVF 280

[Close]
BLAST of Sed0019228 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-05
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 44  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQV-LKMT 103
           +VWAYETIS+LS  VA  LND +IPR+L W  ++S +F +LE+++F  +     V L+ T
Sbjct: 19  QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 78

Query: 104 ENEKQ 108
           + E+Q
Sbjct: 79  DVERQ 83

The following BLAST results are available for this feature:
BLAST of Sed0019228 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156879.15.8e-0542.86putative F-box protein At4g17565 [Momordica charantia][more]
XP_022136676.19.9e-0546.15uncharacterized protein LOC111008328 [Momordica charantia][more]
XP_022157020.19.9e-0538.55uncharacterized protein LOC111023847 [Momordica charantia][more]
BLAST of Sed0019228 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0019228 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUW82.8e-0542.86putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 ... [more]
A0A6J1DRZ74.8e-0538.55uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1C4634.8e-0546.15uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
BLAST of Sed0019228 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019228.1Sed0019228.1mRNA