Sed0019221 (gene) Chayote v1

Overview


Name	Sed0019221
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	LG09: 5998289 .. 6006260 (-)
RNA-Seq Expression	Sed0019221
Synteny	Sed0019221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCGTTAATCCATTTGATTTGTTGGGAGATGACGACGCCGAGGATCCGTCGCAGCTAATTGCGGCGGTGAAGGCGGCGCCGCCGCCGAAGAAAGGTGCTGCGCAGACCAAAACGGCGGCGTTGGGGGCTCAGCCGAACAAGCCCGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGGTGAGATTCTTCGTTTCTTAATTTATGGGTTGGTTTCCAATACGGATCTTTTGGTTTCTTATTTTTGGGTTTTGAAATTTAAGTCTAGAATTACTACGCCAATGCTTAATTTTCATTACTTTCATATTTACATTTTACTTGTGTTTTAAAAAAACAAATCAAATACTTGTTTTGTTTTGTGGAATTTAGTTAGGATTCATGTAATTCTTCAAGAGAAGATAAAACCATACTTGAGATTTTGATTTTGGATAAATACAAGCTTAAATTTTTTTATTTTAAACAAGGGTAACCATGCCCGTCCCTAAGCCAGGCACCGGAGACATCGAAGGAATAATGTCACAGAGTCTCGAACCTGAGACCTTAAGGGTGTGTTTGGGCCCCCGTTTATGTAAACGGCCGAGTTGGTTATAATAACTCAACCGGTGTTTGCCCCACCGTTTATTATAAACGGTGGTTACCTAAATCTGCGTGCCAGTTTATCTAAACCTACGTGCCCGTTTATCTACACCTTACATATATTACTTTTTGTTACATAACCAGCCTCCCAAACACCATTTATCATAATCCCTGTTATAATAACTTGCCCTCAAACACCATTTATAATAACCTACCGTTTATCATAACCCACCGTTTATCATAACCTTCCGTCTATAATAACCAAACCGGTGCCCCAAACTCACCCTAAGAGGTGAGGAACATATCCTCAAAGCCTAAGTCTTCAACCACTATGCCACGTCTTGGGGACAAATACAAGCTTAAAATTCAAAAACCAAAAATAAAAATCAAATGGTTATTAAACAGGGTCTTAATTAATTGTTTTTGGTTGATTGATTTTACGTTTTTCTGATGTTGTTTCGTTTCTAGCTGTTTGTCCTTTTTTCTACATAATTACGCAAGAGTTATGATGGGTGTTGGAGTTCAAGTTTGTTTGCTATTCAGATAATATCCCTTGAGTTGTTTGTTTAGCTACTATGATTAGAACAATAATGAAGACTAAAGAGAGAGAGACAATAATCTGTTTTTGGAAGTAATCCAATGTCAACGATGAAGTTGTGTCTCATGATTTAATAAGCAAGTTTATGTAGCTTCTATTGAAATGTTTCAGGATTTTGAAATAAATTATAGGTTTCATGTACTGATATATTGTTTTGTTCATGGTGAATATGAATGATTAAATTTTATGGATTTTTCTTATTCCACCCTCCTATCAAATTGGAGTGGTCTGTTGTATTTGCCTTTATGGCTCCCTAATTTCACCAATAAATTAAATTGTTTCTTCTCCAAAAAAAAGGTTATGAATTATTAAATTTGTGGATACTGTTTACAAGTTGGAACGTTATCCAATATACTTGTTATTGGTTATTTATTTCAGATTTTTTGTGGGGACTTGGACTCTGCAAATAAATTTTCATGCTTATGCTCGTTTTTTTTATCAACCTTCTATTCTATTTCTCTATCTATAAATTTCTTATGAGTTTCCCCATTGGCATGAATTATACATGGAGTATTTTTTTTTTCTTAAAATGAATGAATAGTAAGAGAAGCAAGGAATGAAAGTGGCCGTGGAGGTCGTGGCAATGGACGAGGTGGAGGACGTGGTTATGGGCGAAGCCGTGAAAGTGGTGGCTTCTATAATGACTCTTTCAATAATGAAAACAGTAGTGCACCTGTAGATAGAGAGACAGGAAAGACAACTGAAGGGCGTGGATATTCTGGGCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAGGCTACTGATGGAGAACGCCCTCGTAGAGTATTTGAGCGCCATAGTGGAACTGGCCGTGAGTAAGTGTCTATTCTTTTAATGTTCATTTTGTACACTCTTGAGTATTCTACATTGTTTTGATTTTATCCTGATTTTATTCCTAGAAATGAATTAAAACGTGAAGGATCGGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGTAAGTGCATCTGTATACCTTCCATCTTCAAGATCATTTTTGGTGTATGTGTTTGCATGAGCCTTCCTTTCATCTTTCTCATGGAAGCCACCATGTTGGATTGAAAGACAAAAATCTATGATCAGGAAAGCCTTTCTTGATATGAAAATGACGCACAACCACCCAACCTTTACAAGGAGCTTGGGCTAGCCTCATTTTTCGTTTTCATTATTCTTTTGGGGTGGGTTGAATTTTTATCCTTGACTTCTTATCTCTTGGATGGTATAATAAGGTTATTTTATCTCCTTAACAATCATTCTTACCTTAAAATTAATGTTCTATATATATCTAGGGTAGCGGAGGAAGCTGTTAATGAAACCGAAAAGAACGTGGGTGATGAAAAGCCTGTTCAGGAGGATGATGCTGGAGGTTCCAATGCAGAGAACGCTGCTAAAGAACCGGAGGAAACAGAACCTGAAGACAAGGTTAGTATCTACAGTTTTTAATACATTTCCCTTAAAATTGAACCCTGCTATTCCATTTGTCCTGTACTTTTTTGTGATTCAAATGCAACTTGTATCTTTTTCTTGCATGTACAATTGAATAGACTTGATAACTTGACTTCTAGTATCATAAAATAGAATTGTAAAAGTTGTTAATTAGCTTGGTGGGCATGGATTTTGAACTCTATTGTACTGTTTGGCATGGCTTTGAATCTAATTTACTATTCTTTATGATACAGGAAATGACTCTGGAGGAGTACGAAAAGCTGCTCGAGGAGAAAAGGAAGTCCCTTCTGGCACTAAAAGCTGAGGAAAGGAAGGTGGATCCTAAAGAATTTGCATCTATGCAGCAAATTTCAAGCAAGAAAGAGAACAATGAAATCTTCGCTAAATTGGTACACCTACTTGGGCCTCTTTCTGAAATTAGAATTAGTTACCTATGGATCTAATTACCCTTGGCTTTTTGGTACTTCAAATCTTGACTTGGCCATTCATCTTTATTTATTATTCCACTTGTAGGGGTCTGAGAAGGATAAGAGAAAAGAAATTGCAGATAAGGAGGAAAGAACTAAGAAGGTATTATTAACCTCATGTTTATAGAAGATTCATTGTCCATTCAATTGTTTACTCAGGTTTGATATCTAATAAAAAATTTAAGTCTTGGGTAGCCTCGACCTCTTTTTTTATTGAGAGGCAAGTTGCAAGTCTTGAGACGATATGAGACTCAAGTCTCATTTTGAACTTATTAATATGATAACAATATTATATAAAGTCAAGTTCTGTCCAAAGATTTTTTTTTTTTAATCCATGATTGTCCAAGTCAGCTTGCGCTCACCTCAACTAATGTCACGGGACGTACTGCCTGACCCGTACAATATTTGGATGGAAAGATTTTTTTTTAATGAAGATATCGAACTTTTATTTAGTAAAAAATGGAAGAACAAATAAGGGAAATACAAAAAGCACAGCCAAAACAAAGTGAGGAGACCTCTTAGAGAAAGGATCTCCGGTCTAGAGAAATTACACCAAAAGGGTAATTACAAAAAATCTTAGTAATTGATGCCCAAAGACAAATATAGAATTTTAGAGAGTTCAAAGATCTCTTCAAGCCTTAAAATTTTATTATTTCTCTCTCCAAAATAAACCACAAAATAGCTCAAATCACTAGTTTCCACAAAAAAATATCTCATTTTTCAATAAAAGAAGTAGAAGCAAACCACTCCCTAATCGTAGCTTTGCAACTCCTCGAGCGCACCCAACACGCTAGGAATACAACACGCTAGTCCATGAAGGAGCCTTCCTCGTCTATCTAAAGTATTGACCGTGCCATGCAAAACCTACTAAGCAAAGAACTTAACCTTCCTTTAAATTTATACCTTCTACCGTGGAGAGAAAGACTAAAAGACCACTTCCCATGAACAGGTAAAAGAAACTAGACAACCAAAAATGGGTTTACAAGAAAAACAATACCGCGTACATCGAGTCCCATTGCCCAACAGATCGAGGAGAGTCGTGATAGAGTACTAAGGGTAAGATGGGTATATTATATGTAAGGGTAGAATAGTAATTAGCATGTAAGGATTTTATTATAACTAGGAGTCCTAGGGTATTTGGAAAGGGAGGGAAATATTTTGGTATTGTCTTGCAAAAGACTTGGGAGAGACATAGCCCTCTCGAAAGGCTAAGAGTACAGTATTGTAACCTCTATCAATTATCAATATAGTGTTCTTGTGTATTCCGTTTATCATCTTTTCAATTTTAGTTCTAGTGTGCTTGTTAAGATATTAGTGTCTTAACAAGTTGCCACCTTAAGCATCTCCCTATCAAATAAAGAATGTTGGAACCCCAAAGAGATAGAAGAGTGAGGACCAAAAGGCACCAACACCTCAGCGACTAAACGACATTTCATACGATCATACCGGATAAATGAAACAAACGAGGAAATCTAAAACAAAGAGGAATTTCTCCCGTCCATGTTTCCTGCCCATCCCCTACATAACTAAACACGAAACGAGAACATGAAGGACACTCCTAAGCAATACCTTTCCAAGGATTCCTAGACATGCCTAGCTCCTCAGCCGCACAATCCAGAGGGAAAACATACTTACAAATATTAACTTTGTGTCAGTGAAAGTTGGAGATTCAAAACGAAAATCCCATGGCCATTTAGCTAATATTACGAATTTTCAAGTTTCCCACTCAAAGACCCCTTGGTTCAGCTCTTTAGAAACCACTTCCCACTTGTAGTGAGCTCCCTCTCCCGATACCCTCCCTTAAAAGTCTCTCATCAACTTCTACACACTAAGGGCATGTTTGGCTAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGAAAGGGAAGTTGGAGTAAATTAGTGTTTGGTGGAAAAGAAAAAAAGTGAAATGGTAATAAATTTATGTTTGGTGGGAAGGGAAAAGAAAGGAAGTGATGTAAAAAAAATTTAAATAATAGATATTTATTGTTTTTTAATGTAATATTCATAAAATATGATTTTTGAAATTTATTTTATTTATTATTTAAATAAAATTTAAAATTAAGTTTAAAAATTCAATTCAAAATGAGTTACACCAAAAGGAAAATATATTAGTTTAATTATTTTAAGTGTTTATATCTTTAATTCATATGGATATGTATTTTCATATGTTTATTAAAAAAAATGCACGAGTTAAAAAAAATTGATAAATAATACGACAAATATTAATTAATATATATTTTTATACAACAAATTTCAAATGCATGATAAAAATCAAATGTATAAACACTAACAAATATTATTTAAAGAACCATATATATTTAAAAAAGAAATGATAAATATTACACTTTAAAAGAAAAAAATATACACATAATAAATAAATATAATCAATTAAATTAAATTAATGAATGGTTCAAAGTTAATAACTTTAATTCTTTTTCACAAAAAAAAAAACTTTAATTCTTGATTTGTGGGAAGCTAAGGTTCCAAACTTAATTTTGACGATTTAATTTGAATAATAACACACCAAAATATAATTATAAAAAAATTAAAATAAACACTCAATTTCAATTTAAAAGATGACTCATTTTATTTTAATTATTACTTAATAAAAATTTAATTTTTATATATTTAGATCGTTACCATTATCCAATAATTAAATTTGATAATCGGATAAAAACAATCAAATTATCAGAAATTTAAATTGATAAGCATTACCAAAAAGTTGAAGGCAAAATTCAAAATTTAAAATTAAAAAAAAAAAAAAAAATATATATATATATATATATATATAATAAATTTGATTAGAAACAAAAAAAATGAAGGTAATAAACTTTGTGTATAAGAATTTAAAAAGTAAAAAATAGACTAAAAAATAAAAATTTACCAAAAAGAAAAAAGAGGGTGGGTTATCCCTTCCCTTCCCAACTGGGAAGAAATAACCCAGGTGGCCAAATACTGAAATACATTTTACCTTCCCTTCCCAGTGATAACTATGGGGGCCAAACATGCCCTAAGTTGGATTGTCTCTTATCACAAGTTTATATAAGAAAAGAAAATTCTCAATTTTCCACTGAATACTGATATACATTAAATTTCTTGAGTTAATAATCTAAGCTCATCCTCAAAATGGAAAAATAAAACTTTTAGCTTAGTAGTTTGTCACTTTTCCTTATTCAATGATGACAAAATTGTTACAATCTAGATGTCTCTTCGAAACCTATTTGTAAAACTCTAAATAGTGAATAGAACAGTTGTTTTTGTAACTGGAGAGACAAGACACTCAAAATATTTCCACAAAACATTTTTCTATATTTCTCAACTTCTTTTTCTCAAATTTCTTTCTTGCTCTATCTTTCACAATGGAATAAGCTATCGATTTATAGCCTATTACAAGTTTGTAGCTTCAACAAGACTATAGCCATAAATTTGTAACCATTTTTGGCATTCAATTACAAGTAACCATTTTGCCACTAACTCCTAATTTAAGACTTACTAACCACATTTAAGAGTCCACTAACTCCTAAATAAAAACTCCCACTAACAATAATTAAATAACACATTAAAATTAGCATTAAGTTTATTCAAACAAAAATTGTGGCTGTCTATTAGTGTGGTTTTTTTAGACATGAAGTAGTAAGTTTTTCTTTAAATAACGGTTTATGCACCAATTAATATTTTTGTCTTTTCGGCACTCATCCCATTAAATCAAACTCTTTTACAATATAGTACATAGGTTTTAGGGGAGTTGACCTTGGTGAGTGGCCGTCAAATATTTTTATCATCTCTTATCTAAAATTAAACACTTGTAGTACTTAATCGTGGATTGAACTACAGGGACATAATAAATTGATCTCTATTATGGAGGTGTTTTTTTTTTTTATAACGTAGATAAAATAAAATAACAGAATAAAAGCTAGAGATAAATCAAGTTACTCAGCGAGTCAGAGTGATTCAATTATGTTGAATTTAGTACTTAGGATTAAATTTATCAACTTATGCTTTTTATCAGGAAGACCCGAAGTTATCTTATGCCCCCAATTTAATTAATTCTGTTGAATTAATCCTAATTAGCTTCCTCGCGTCCCCAAGGGATGGCATGATGGTCGAAGGATTGGGTTTCGAAGGTGTGCTCTCCTTAATGTCTTAGGTTCAAAACTCACCTATGACATTAATTTGTAGACACCTCTCGTGTCTCCAATCTTTTGCAGTCTTCTAGTGCTAGGGCTAGGGTTGGGTTTAGGGTTACCCCTGGTATAGTAAAGTGAAACTCCAATTATCCGATTTCAGAAGAAAAAAAATTAGCTTCCTAGCTGCACTTGATCAATCCGAGCTAGTAGTATGGGGATTGGTTAGAAAACCATAACTAATTCAGACTAGCTAATCTAGACTAATTAACATGCTGCATCCTTCACCCAAGCTAATAATCTCATATGCTACTAAAATATAAATGAACATAACAATTTTCCATCAACATGCCTTCTGTATGTTGGTGGAATATATTTCTGTTATAATTGTACATTGTACATTTTTGTAGTTGTAGGAACGGGTCTATGCAAAGGCATGTCCGGTTTTTTGAACTCTTGAAAATATGGAAATCGACCTTGTAAAAGGTTAAATTACTGATATTTCTTTTGTTTTGGCATTTGTAGTCTTTGAGTATTAATGAATTCTTGAAGCCTGCGGAAGGGGAGAGACAATACGGCTCAGGTGGCCGGGGAAGGGGCCGTGGCCGTGGTTCGAGGGGAGGATACAGCGGCATCTCGACTAGCAACGTTGCAGCCCCATCCATTGAGGATCCTGGGCAGTTCCCAACCCTAGGTGCTAAGTGA

mRNA sequence

ATGTCGACCGTTAATCCATTTGATTTGTTGGGAGATGACGACGCCGAGGATCCGTCGCAGCTAATTGCGGCGGTGAAGGCGGCGCCGCCGCCGAAGAAAGGTGCTGCGCAGACCAAAACGGCGGCGTTGGGGGCTCAGCCGAACAAGCCCGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAAGCAAGGAATGAAAGTGGCCGTGGAGGTCGTGGCAATGGACGAGGTGGAGGACGTGGTTATGGGCGAAGCCGTGAAAGTGGTGGCTTCTATAATGACTCTTTCAATAATGAAAACAGTAGTGCACCTGTAGATAGAGAGACAGGAAAGACAACTGAAGGGCGTGGATATTCTGGGCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAGGCTACTGATGGAGAACGCCCTCGTAGAGTATTTGAGCGCCATAGTGGAACTGGCCGTGAAAATGAATTAAAACGTGAAGGATCGGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGGTAGCGGAGGAAGCTGTTAATGAAACCGAAAAGAACGTGGGTGATGAAAAGCCTGTTCAGGAGGATGATGCTGGAGGTTCCAATGCAGAGAACGCTGCTAAAGAACCGGAGGAAACAGAACCTGAAGACAAGGAAATGACTCTGGAGGAGTACGAAAAGCTGCTCGAGGAGAAAAGGAAGTCCCTTCTGGCACTAAAAGCTGAGGAAAGGAAGGTGGATCCTAAAGAATTTGCATCTATGCAGCAAATTTCAAGCAAGAAAGAGAACAATGAAATCTTCGCTAAATTGGGGTCTGAGAAGGATAAGAGAAAAGAAATTGCAGATAAGGAGGAAAGAACTAAGAAGTCTTTGAGTATTAATGAATTCTTGAAGCCTGCGGAAGGGGAGAGACAATACGGCTCAGGTGGCCGGGGAAGGGGCCGTGGCCGTGGTTCGAGGGGAGGATACAGCGGCATCTCGACTAGCAACGTTGCAGCCCCATCCATTGAGGATCCTGGGCAGTTCCCAACCCTAGGTGCTAAGTGA

Coding sequence (CDS)

ATGTCGACCGTTAATCCATTTGATTTGTTGGGAGATGACGACGCCGAGGATCCGTCGCAGCTAATTGCGGCGGTGAAGGCGGCGCCGCCGCCGAAGAAAGGTGCTGCGCAGACCAAAACGGCGGCGTTGGGGGCTCAGCCGAACAAGCCCGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAAGCAAGGAATGAAAGTGGCCGTGGAGGTCGTGGCAATGGACGAGGTGGAGGACGTGGTTATGGGCGAAGCCGTGAAAGTGGTGGCTTCTATAATGACTCTTTCAATAATGAAAACAGTAGTGCACCTGTAGATAGAGAGACAGGAAAGACAACTGAAGGGCGTGGATATTCTGGGCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAGGCTACTGATGGAGAACGCCCTCGTAGAGTATTTGAGCGCCATAGTGGAACTGGCCGTGAAAATGAATTAAAACGTGAAGGATCGGGTCGTGGAAATTGGGGAAGGTCAACTGACGAATTTGCTGAGGTAGCGGAGGAAGCTGTTAATGAAACCGAAAAGAACGTGGGTGATGAAAAGCCTGTTCAGGAGGATGATGCTGGAGGTTCCAATGCAGAGAACGCTGCTAAAGAACCGGAGGAAACAGAACCTGAAGACAAGGAAATGACTCTGGAGGAGTACGAAAAGCTGCTCGAGGAGAAAAGGAAGTCCCTTCTGGCACTAAAAGCTGAGGAAAGGAAGGTGGATCCTAAAGAATTTGCATCTATGCAGCAAATTTCAAGCAAGAAAGAGAACAATGAAATCTTCGCTAAATTGGGGTCTGAGAAGGATAAGAGAAAAGAAATTGCAGATAAGGAGGAAAGAACTAAGAAGTCTTTGAGTATTAATGAATTCTTGAAGCCTGCGGAAGGGGAGAGACAATACGGCTCAGGTGGCCGGGGAAGGGGCCGTGGCCGTGGTTCGAGGGGAGGATACAGCGGCATCTCGACTAGCAACGTTGCAGCCCCATCCATTGAGGATCCTGGGCAGTTCCCAACCCTAGGTGCTAAGTGA

Protein sequence

MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTTEGRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTSNVAAPSIEDPGQFPTLGAK

Homology

[Close]

BLAST of Sed0019221 vs. NCBI nr
Match: XP_022959730.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])

HSP 1 Score: 547.0 bits (1408), Expect = 1.2e-151
Identity = 311/360 (86.39%), Postives = 319/360 (88.61%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAA----PPPKKGAAQTKTAALGAQPNKPASLPSK 60
           M+TVNPFDLLGDDDAEDPSQLIAA K A    P PKKG AQ K AALGAQ NKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVAAVTSPAPKKGPAQNKPAALGAQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKT 120
           PLPPAQAVREARNE GRGGRG+GRG GRGYGR RE  GF   SFNNEN SA  D ETGKT
Sbjct: 61  PLPPAQAVREARNEGGRGGRGSGRGVGRGYGRGREGSGFVRGSFNNENISAAEDGETGKT 120

Query: 121 TEGRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRST 180
           TE RGY GPRGRGGRRGGFNNGEA DGERPRRVFERHSGTG  NE KREGSGRGNWGR T
Sbjct: 121 TERRGYGGPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPT 180

Query: 181 DEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLL 240
           +EFAE AEEAVNE EKN+GDEKPVQEDDAGG NAEN+AKEPEETEPEDKEMTLEEYEKLL
Sbjct: 181 EEFAEAAEEAVNEMEKNMGDEKPVQEDDAGGVNAENSAKEPEETEPEDKEMTLEEYEKLL 240

Query: 241 EEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKK 300
           EEKRK+LLALK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIADKEERTKK
Sbjct: 241 EEKRKALLALKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIADKEERTKK 300

Query: 301 SLSINEFLKPAEGERQYGSGGRGRGR-GRGSRGGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           SLSINEFLKPAEGER YGSGGRGRGR GRGSRGGYSG S SNV APSIEDPGQFPTLGAK
Sbjct: 301 SLSINEFLKPAEGERHYGSGGRGRGRGGRGSRGGYSGNSISNVPAPSIEDPGQFPTLGAK 360

[Close]

BLAST of Sed0019221 vs. NCBI nr
Match: XP_023514394.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 545.8 bits (1405), Expect = 2.7e-151
Identity = 309/361 (85.60%), Postives = 321/361 (88.92%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVK--AAPPPKKGAAQTKTAALGAQPNKPASLPSKPL 60
           M+TVNPFDLLGDDDAEDPSQLIAA K  AAPPPKKG AQTK AALGAQ NK ASLPSKPL
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVVAAPPPKKGPAQTKPAALGAQQNKAASLPSKPL 60

Query: 61  PPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTTE 120
           PPAQAVREARNES RGGRG+GRGGGRGYGR RE  GF   SFNNE+SSA  D ETGKTTE
Sbjct: 61  PPAQAVREARNESSRGGRGSGRGGGRGYGRGREGAGFNRGSFNNESSSAAEDGETGKTTE 120

Query: 121 GRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDE 180
            RGY+GPRGRGGRRGGFNNGEATDGERPRRVFERHSGTG  NE KREGSGRGNWGR T+E
Sbjct: 121 RRGYAGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPTEE 180

Query: 181 FAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEE 240
           FAE AEEAVNETEKN+GDEKP+QEDD GG N EN+AKEPEETEPEDKEMTLEEYEKLLEE
Sbjct: 181 FAEAAEEAVNETEKNMGDEKPLQEDDTGGVNPENSAKEPEETEPEDKEMTLEEYEKLLEE 240

Query: 241 KRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSL 300
           KRK+LL LK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIA+KEERTKKSL
Sbjct: 241 KRKALLTLKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIAEKEERTKKSL 300

Query: 301 SINEFLKPAEGERQYGSGGRGRGRGRGSR----GGYSGISTSNVAAPSIEDPGQFPTLGA 356
           SINEFLKPAEGER Y  GGRGRGRGRGSR    GGYSG ST NVA PSIEDPGQFPTLGA
Sbjct: 301 SINEFLKPAEGERHYAPGGRGRGRGRGSRGGGGGGYSGNSTINVATPSIEDPGQFPTLGA 360

[Close]

BLAST of Sed0019221 vs. NCBI nr
Match: XP_023004144.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima])

HSP 1 Score: 540.8 bits (1392), Expect = 8.8e-150
Identity = 305/359 (84.96%), Postives = 317/359 (88.30%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAA----PPPKKGAAQTKTAALGAQPNKPASLPSK 60
           M+TVNPFDLLGDDDAEDPSQLIAA K A    P PKKG AQ K AALGAQ NKPA+LPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVAAMTSPAPKKGPAQNKPAALGAQQNKPANLPSK 60

Query: 61  PLPPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKT 120
           PLPPAQAVREARNESGRGGRG+GRG GRGYGR RE  GF   SFNNEN SA  D ETGKT
Sbjct: 61  PLPPAQAVREARNESGRGGRGSGRGVGRGYGRGREGSGFVRGSFNNENISAAEDGETGKT 120

Query: 121 TEGRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRST 180
           TE RGY+GPRGRGGRRGGFNNGEA DGERPRRVFERHSGTG  NE KREGSGRGNWGR +
Sbjct: 121 TERRGYAGPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPS 180

Query: 181 DEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLL 240
           +EF+E  EEAVNE EKN+GDEKPVQED+A G N ENAAKEPEETEPEDKEMTLEEYEKLL
Sbjct: 181 EEFSETVEEAVNEMEKNMGDEKPVQEDNAEGVNTENAAKEPEETEPEDKEMTLEEYEKLL 240

Query: 241 EEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKK 300
           EEKRK+LLALK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIADKEER KK
Sbjct: 241 EEKRKALLALKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIADKEERNKK 300

Query: 301 SLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           SLSINEFLKPAEGER YGSGGRGRGRGRGSRGGYSG S SNV APSIEDPGQFPTLGAK
Sbjct: 301 SLSINEFLKPAEGERHYGSGGRGRGRGRGSRGGYSGNSISNVPAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. NCBI nr
Match: XP_022959731.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])

HSP 1 Score: 539.3 bits (1388), Expect = 2.6e-149
Identity = 307/359 (85.52%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVK-AAPPPKKGAAQTKTAALGAQPNKPASLPSKPLP 60
           M+TVNPFDLLGDDDAEDPSQLIAA K  A PPKKG AQTK AALGAQ NK ASLPSKPLP
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVVAAPPKKGPAQTKPAALGAQQNKAASLPSKPLP 60

Query: 61  PAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTTEG 120
           PAQAVREARNES RGGRG+GRGGGRGYGR RE  GF   SFNNE+SSA  D ETGKTTE 
Sbjct: 61  PAQAVREARNESSRGGRGSGRGGGRGYGRGREGSGFNRGSFNNESSSAAEDGETGKTTER 120

Query: 121 RGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDEF 180
           RGY+GPRGRGGRRG FNNGEATDGERPRRVFERHSGTG  NE KREGSGRGNWGR T+EF
Sbjct: 121 RGYAGPRGRGGRRGDFNNGEATDGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPTEEF 180

Query: 181 AEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEEK 240
           AE AEEAVNE EKN+GDEKPVQEDDAGG NAEN+AKEPEETEPEDKEMTLEEYEKLLEEK
Sbjct: 181 AEAAEEAVNEMEKNMGDEKPVQEDDAGGVNAENSAKEPEETEPEDKEMTLEEYEKLLEEK 240

Query: 241 RKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSLS 300
           RK+LL LK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIA+KEERTKK LS
Sbjct: 241 RKALLTLKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIAEKEERTKKFLS 300

Query: 301 INEFLKPAEGERQYGSGGRGRGRGRGSR---GGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           INEFLKPAEGER Y  GGRGRGRGRGSR   GGYSG ST NVA PSIEDPGQFPTLGAK
Sbjct: 301 INEFLKPAEGERHYAPGGRGRGRGRGSRGGGGGYSGNSTINVATPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. NCBI nr
Match: XP_023004145.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima])

HSP 1 Score: 538.5 bits (1386), Expect = 4.4e-149
Identity = 307/359 (85.52%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVK-AAPPPKKGAAQTKTAALGAQPNKPASLPSKPLP 60
           M+TVNPFDLLGDDDAEDPSQLIAA K  A PPKKG AQTK AALGAQ NK ASLPSKPLP
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVVAAPPKKGPAQTKPAALGAQQNKAASLPSKPLP 60

Query: 61  PAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTTEG 120
           PAQAVREARNES RGGRG+GR GGRGYGR RE  GF   SFNNE+SSA  D ETGKTTE 
Sbjct: 61  PAQAVREARNESSRGGRGSGRVGGRGYGRGREGAGFNRGSFNNESSSAAEDGETGKTTER 120

Query: 121 RGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDEF 180
           R Y+GPRGRGGRRGGFNNGEATDGERPRRVFERHSGTG  NE KREGSGRGNWGR T+EF
Sbjct: 121 RAYAGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPTEEF 180

Query: 181 AEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEEK 240
           AE AEEAVNETEKN+GDEKPVQEDDAGG NAEN+AKEPEETEPEDKEMTLEEYEKLLEEK
Sbjct: 181 AEAAEEAVNETEKNIGDEKPVQEDDAGGVNAENSAKEPEETEPEDKEMTLEEYEKLLEEK 240

Query: 241 RKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSLS 300
           RK+LL LK EERKVDPKEFASMQQ+S KKENN+IF KLG+EKDKRKEIADKEERTKKSLS
Sbjct: 241 RKALLTLKTEERKVDPKEFASMQQLSCKKENNDIFIKLGTEKDKRKEIADKEERTKKSLS 300

Query: 301 INEFLKPAEGERQYGSGGRGRGRGRGSR---GGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           INEFLKPAEGER Y  GGRGRGRGRGSR   GGYSG ST  VA PSIEDPGQFPTLGAK
Sbjct: 301 INEFLKPAEGERHYAPGGRGRGRGRGSRGGGGGYSGNSTIIVATPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 4.2e-70
Identity = 197/367 (53.68%), Postives = 236/367 (64.31%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPP 60
           M+T+NPFDLL DDDAEDPSQL  A++     KK    +   A  A       LPSKPLPP
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDKSKKSGQVSSLPAKSA-----PKLPSKPLPP 60

Query: 61  AQAVREARNES-----GRGGRGNGRGG-GRGYGRSRESGGFYNDSFNNENSSAPVDRETG 120
           AQAVREAR+++     GRGG   GRGG  R  G +  SGG+   S   + S +  +R  G
Sbjct: 61  AQAVREARSDAPRGGGGRGGFNRGRGGYNRDDGNNGYSGGYTKPSGEGDVSKSSYERRGG 120

Query: 121 KTTEGRGYSGPRG--RGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNW 180
                  + G  G   GGRRGGF+N E  DGERPRR FER SGTGR ++ KR+GSGRGNW
Sbjct: 121 GGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDGSGRGNW 180

Query: 181 GRSTDEFAEVAEEAVN-ETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEE 240
           G   +E A   E     ETEK+VG EKP  +D A  +N E+     EE EPEDKEMTL+E
Sbjct: 181 GTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEPEDKEMTLDE 240

Query: 241 YEKLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKE 300
           YEK+LEEK+K+L +L   ERKVD K F SMQQ+S+KK N+EIF KLGS+KDKRK+  DKE
Sbjct: 241 YEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKRKD--DKE 300

Query: 301 ERTKKSLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTS---NVAAPSIEDPGQ 356
           E+ KK++SINEFLKPAEG   Y  G  GRGRG   RGG S   +    N AAP+I D  Q
Sbjct: 301 EKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAPAIGDAAQ 355

[Close]

BLAST of Sed0019221 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.4e-62
Identity = 175/302 (57.95%), Postives = 209/302 (69.21%), Query Frame = 0


Query: 74  GGRGNGRGGGRGYGRSRESGGFYNDSFNNENS-----------SAPVDRETGKTTEGR-G 133
           GGRG  RGGGRG G  R   GF  +S ++EN+               D E+GK +E R G
Sbjct: 3   GGRGGPRGGGRGRGPGR-GRGFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGG 62

Query: 134 YSGPRG--RGGRRGGFNNGEAT--DGERPRRVFERHSGTGRENE-LKREGSGRGNWGRST 193
           Y GPRG   GGRRGGFNNG+A   +GERPRRVF+R SGTGR NE +KREGSGRGNWG   
Sbjct: 63  YGGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPA 122

Query: 194 DEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLL 253
           D+ A+  E  VN+ EK V  EK   +++A  +N ++ A EPEE EPE+KEMTLEEYEKL+
Sbjct: 123 DDIAQETEVPVNDGEKIVEAEKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLM 182

Query: 254 EEKRKSLLALKAEERKVD-PKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTK 313
           EEKRK+LLALK EERKV+  KE  SMQ +S+KK ++EIF KLGSEK+KRKE  +K  +T+
Sbjct: 183 EEKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAVEKARKTQ 242

Query: 314 KSLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTSN--VAAPSIEDPGQFPTLG 356
              SINEFLKPAEGE     GGRGRG GRG RGG+ G    N   +APSIED GQFP+L 
Sbjct: 243 ---SINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGGGVGGNKSFSAPSIEDVGQFPSLV 299

[Close]

BLAST of Sed0019221 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.9e-59
Identity = 181/372 (48.66%), Postives = 228/372 (61.29%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPP 60
           M+++NPFDLLG DDAEDPSQL  A+         + + + AA   QP K A  P+KP PP
Sbjct: 1   MASLNPFDLLG-DDAEDPSQLAVAL---------SQKVEKAAAAVQPPKAAKFPTKPAPP 60

Query: 61  AQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFN-----NENSSAPVDRETGK 120
           +QAVRE+RN + +GGRG G GG  G+ R R +GG+  D+ N     NEN  +   R   +
Sbjct: 61  SQAVRESRN-APQGGRG-GTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYRRPSE 120

Query: 121 TTEGRGYSGPRG--------RGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGS 180
             +G    G  G         G RRGG  NGE+ D ERP R ++RHS TG    +KR G 
Sbjct: 121 DADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGG 180

Query: 181 GRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPED--- 240
           GRGNWG + D+    +EE   E EK+   EK   ED+   +  E  A+E  + E E+   
Sbjct: 181 GRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEA 240

Query: 241 KEMTLEEYEKLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKE-NNEIFAKLGSEKDK 300
           +EMTLEEYEK+LEEK+K+L A K EERKVD K F SMQQ+S+KK  + EIF KLGS+K+K
Sbjct: 241 REMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEK 300

Query: 301 RKEIADKEERTKKSLSINEFLKPAEGERQYGSGGRGRGR-GRGSRG-GYSGISTSNVAAP 354
           RK   D  E+ KKSLSINEFLKPA+G+R  G GG  RGR GRG RG G +       AAP
Sbjct: 301 RK---DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAP 357

[Close]

BLAST of Sed0019221 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.2e-58
Identity = 184/379 (48.55%), Postives = 232/379 (61.21%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPP 60
           M++VNPFDLL DDDAEDPSQ++A+      P K  A  +TA       K   +P+KP PP
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVAS-----KPLKVVAPVQTA-------KSGKMPTKPPPP 60

Query: 61  AQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETG--KTTE 120
           +QAVREARN  G GGRG GRGG  G G     GG   DS NN+  +       G  ++ E
Sbjct: 61  SQAVREARNAPG-GGRGAGRGGSYGRG---GRGGNNRDSRNNDGPANENGYGGGYRRSEE 120

Query: 121 GRG--YSGPRG--RGGRRGGFNN-GEATDGERPRRVFERHSGTGRENELKREGSGRGNWG 180
           G G    GP G  RG RRG ++N G++ D ERPR+ ++RHS T   NE KR+G+GR NWG
Sbjct: 121 GDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWG 180

Query: 181 RSTDEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYE 240
            + D+   V EE+    +KN+  EK   E +A  +  E  A++ EE +PEDKEMTLEEYE
Sbjct: 181 TTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKEMTLEEYE 240

Query: 241 KLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKENN-EIFAKLGSEKDKRKEIADKEE 300
           K+LEEK+K+L A K EERKVD K F +MQQ+SSKK NN E+F KLG+EKDKR  I ++EE
Sbjct: 241 KVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREE 300

Query: 301 RTKKSLSINEFLKPAEGERQYG-----SGGR-------------GRGRGRGSRGGYSGIS 354
           +T+KSLSINEFLKPA+G+  Y       GGR             GR    G R    G +
Sbjct: 301 KTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGA 359

[Close]

BLAST of Sed0019221 vs. ExPASy TrEMBL
Match: A0A6J1H755 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111460713 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.9e-152
Identity = 311/360 (86.39%), Postives = 319/360 (88.61%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAA----PPPKKGAAQTKTAALGAQPNKPASLPSK 60
           M+TVNPFDLLGDDDAEDPSQLIAA K A    P PKKG AQ K AALGAQ NKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVAAVTSPAPKKGPAQNKPAALGAQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKT 120
           PLPPAQAVREARNE GRGGRG+GRG GRGYGR RE  GF   SFNNEN SA  D ETGKT
Sbjct: 61  PLPPAQAVREARNEGGRGGRGSGRGVGRGYGRGREGSGFVRGSFNNENISAAEDGETGKT 120

Query: 121 TEGRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRST 180
           TE RGY GPRGRGGRRGGFNNGEA DGERPRRVFERHSGTG  NE KREGSGRGNWGR T
Sbjct: 121 TERRGYGGPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPT 180

Query: 181 DEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLL 240
           +EFAE AEEAVNE EKN+GDEKPVQEDDAGG NAEN+AKEPEETEPEDKEMTLEEYEKLL
Sbjct: 181 EEFAEAAEEAVNEMEKNMGDEKPVQEDDAGGVNAENSAKEPEETEPEDKEMTLEEYEKLL 240

Query: 241 EEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKK 300
           EEKRK+LLALK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIADKEERTKK
Sbjct: 241 EEKRKALLALKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIADKEERTKK 300

Query: 301 SLSINEFLKPAEGERQYGSGGRGRGR-GRGSRGGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           SLSINEFLKPAEGER YGSGGRGRGR GRGSRGGYSG S SNV APSIEDPGQFPTLGAK
Sbjct: 301 SLSINEFLKPAEGERHYGSGGRGRGRGGRGSRGGYSGNSISNVPAPSIEDPGQFPTLGAK 360

[Close]

BLAST of Sed0019221 vs. ExPASy TrEMBL
Match: A0A6J1KVE4 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111497566 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.2e-150
Identity = 305/359 (84.96%), Postives = 317/359 (88.30%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAA----PPPKKGAAQTKTAALGAQPNKPASLPSK 60
           M+TVNPFDLLGDDDAEDPSQLIAA K A    P PKKG AQ K AALGAQ NKPA+LPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVAAMTSPAPKKGPAQNKPAALGAQQNKPANLPSK 60

Query: 61  PLPPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKT 120
           PLPPAQAVREARNESGRGGRG+GRG GRGYGR RE  GF   SFNNEN SA  D ETGKT
Sbjct: 61  PLPPAQAVREARNESGRGGRGSGRGVGRGYGRGREGSGFVRGSFNNENISAAEDGETGKT 120

Query: 121 TEGRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRST 180
           TE RGY+GPRGRGGRRGGFNNGEA DGERPRRVFERHSGTG  NE KREGSGRGNWGR +
Sbjct: 121 TERRGYAGPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPS 180

Query: 181 DEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLL 240
           +EF+E  EEAVNE EKN+GDEKPVQED+A G N ENAAKEPEETEPEDKEMTLEEYEKLL
Sbjct: 181 EEFSETVEEAVNEMEKNMGDEKPVQEDNAEGVNTENAAKEPEETEPEDKEMTLEEYEKLL 240

Query: 241 EEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKK 300
           EEKRK+LLALK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIADKEER KK
Sbjct: 241 EEKRKALLALKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIADKEERNKK 300

Query: 301 SLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           SLSINEFLKPAEGER YGSGGRGRGRGRGSRGGYSG S SNV APSIEDPGQFPTLGAK
Sbjct: 301 SLSINEFLKPAEGERHYGSGGRGRGRGRGSRGGYSGNSISNVPAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. ExPASy TrEMBL
Match: A0A6J1H5P3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111460714 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.2e-149
Identity = 307/359 (85.52%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVK-AAPPPKKGAAQTKTAALGAQPNKPASLPSKPLP 60
           M+TVNPFDLLGDDDAEDPSQLIAA K  A PPKKG AQTK AALGAQ NK ASLPSKPLP
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVVAAPPKKGPAQTKPAALGAQQNKAASLPSKPLP 60

Query: 61  PAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTTEG 120
           PAQAVREARNES RGGRG+GRGGGRGYGR RE  GF   SFNNE+SSA  D ETGKTTE 
Sbjct: 61  PAQAVREARNESSRGGRGSGRGGGRGYGRGREGSGFNRGSFNNESSSAAEDGETGKTTER 120

Query: 121 RGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDEF 180
           RGY+GPRGRGGRRG FNNGEATDGERPRRVFERHSGTG  NE KREGSGRGNWGR T+EF
Sbjct: 121 RGYAGPRGRGGRRGDFNNGEATDGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPTEEF 180

Query: 181 AEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEEK 240
           AE AEEAVNE EKN+GDEKPVQEDDAGG NAEN+AKEPEETEPEDKEMTLEEYEKLLEEK
Sbjct: 181 AEAAEEAVNEMEKNMGDEKPVQEDDAGGVNAENSAKEPEETEPEDKEMTLEEYEKLLEEK 240

Query: 241 RKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSLS 300
           RK+LL LK EERKVDPKEFASMQQ+S KKENN+IF KLGSEKDKRKEIA+KEERTKK LS
Sbjct: 241 RKALLTLKTEERKVDPKEFASMQQLSCKKENNDIFIKLGSEKDKRKEIAEKEERTKKFLS 300

Query: 301 INEFLKPAEGERQYGSGGRGRGRGRGSR---GGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           INEFLKPAEGER Y  GGRGRGRGRGSR   GGYSG ST NVA PSIEDPGQFPTLGAK
Sbjct: 301 INEFLKPAEGERHYAPGGRGRGRGRGSRGGGGGYSGNSTINVATPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. ExPASy TrEMBL
Match: A0A6J1KTS3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111497567 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 2.1e-149
Identity = 307/359 (85.52%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVK-AAPPPKKGAAQTKTAALGAQPNKPASLPSKPLP 60
           M+TVNPFDLLGDDDAEDPSQLIAA K  A PPKKG AQTK AALGAQ NK ASLPSKPLP
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKKVVAAPPKKGPAQTKPAALGAQQNKAASLPSKPLP 60

Query: 61  PAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTTEG 120
           PAQAVREARNES RGGRG+GR GGRGYGR RE  GF   SFNNE+SSA  D ETGKTTE 
Sbjct: 61  PAQAVREARNESSRGGRGSGRVGGRGYGRGREGAGFNRGSFNNESSSAAEDGETGKTTER 120

Query: 121 RGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDEF 180
           R Y+GPRGRGGRRGGFNNGEATDGERPRRVFERHSGTG  NE KREGSGRGNWGR T+EF
Sbjct: 121 RAYAGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGHGNEFKREGSGRGNWGRPTEEF 180

Query: 181 AEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEEK 240
           AE AEEAVNETEKN+GDEKPVQEDDAGG NAEN+AKEPEETEPEDKEMTLEEYEKLLEEK
Sbjct: 181 AEAAEEAVNETEKNIGDEKPVQEDDAGGVNAENSAKEPEETEPEDKEMTLEEYEKLLEEK 240

Query: 241 RKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSLS 300
           RK+LL LK EERKVDPKEFASMQQ+S KKENN+IF KLG+EKDKRKEIADKEERTKKSLS
Sbjct: 241 RKALLTLKTEERKVDPKEFASMQQLSCKKENNDIFIKLGTEKDKRKEIADKEERTKKSLS 300

Query: 301 INEFLKPAEGERQYGSGGRGRGRGRGSR---GGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           INEFLKPAEGER Y  GGRGRGRGRGSR   GGYSG ST  VA PSIEDPGQFPTLGAK
Sbjct: 301 INEFLKPAEGERHYAPGGRGRGRGRGSRGGGGGYSGNSTIIVATPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. ExPASy TrEMBL
Match: A0A6J1EYL1 (RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439720 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 4.0e-148
Identity = 299/359 (83.29%), Postives = 316/359 (88.02%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVK----AAPPPKKGAAQTKTAALGAQPNKPASLPSK 60
           M+TVNPFDLLGDDDAEDPSQLIAA +     APPPKKG+AQTK     +Q NKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETGKT 120
           PLPP+QAVREARNE  RGGRG+GRGGGRGYGR RE GGF  D  N+EN+SAP D E GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TEGRGYSGPRGRGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRST 180
           TE RGY GPRGRGGRRGGFNNGEA DGERPRRVFERHSGTGR NE KREG+GRGNWGR  
Sbjct: 121 TERRGYGGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGRPA 180

Query: 181 DEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLL 240
           DEFAEVAEEAVNE EKNVGDEKPVQE+D  G N+EN AKEPEETEPEDKEMTLEEYEKLL
Sbjct: 181 DEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEKLL 240

Query: 241 EEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKK 300
           E+KRK+L+ALK EERKVDPKEFASMQQ+SSKKENN+IF KLGSEKDKRKEIADKEERTKK
Sbjct: 241 EDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIKLGSEKDKRKEIADKEERTKK 300

Query: 301 SLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTSNVAAPSIEDPGQFPTLGAK 356
           SLSINEFL+PAEGER Y  GGRGRGRGRGSRGGY G S SNVAAPSIEDPGQFPTLGAK
Sbjct: 301 SLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSSISNVAAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Sed0019221 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 266.5 bits (680), Expect = 3.0e-71
Identity = 197/367 (53.68%), Postives = 236/367 (64.31%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPP 60
           M+T+NPFDLL DDDAEDPSQL  A++     KK    +   A  A       LPSKPLPP
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDKSKKSGQVSSLPAKSA-----PKLPSKPLPP 60

Query: 61  AQAVREARNES-----GRGGRGNGRGG-GRGYGRSRESGGFYNDSFNNENSSAPVDRETG 120
           AQAVREAR+++     GRGG   GRGG  R  G +  SGG+   S   + S +  +R  G
Sbjct: 61  AQAVREARSDAPRGGGGRGGFNRGRGGYNRDDGNNGYSGGYTKPSGEGDVSKSSYERRGG 120

Query: 121 KTTEGRGYSGPRG--RGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNW 180
                  + G  G   GGRRGGF+N E  DGERPRR FER SGTGR ++ KR+GSGRGNW
Sbjct: 121 GGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDGSGRGNW 180

Query: 181 GRSTDEFAEVAEEAVN-ETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEE 240
           G   +E A   E     ETEK+VG EKP  +D A  +N E+     EE EPEDKEMTL+E
Sbjct: 181 GTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEPEDKEMTLDE 240

Query: 241 YEKLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKE 300
           YEK+LEEK+K+L +L   ERKVD K F SMQQ+S+KK N+EIF KLGS+KDKRK+  DKE
Sbjct: 241 YEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKRKD--DKE 300

Query: 301 ERTKKSLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTS---NVAAPSIEDPGQ 356
           E+ KK++SINEFLKPAEG   Y  G  GRGRG   RGG S   +    N AAP+I D  Q
Sbjct: 301 EKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAPAIGDAAQ 355

[Close]

BLAST of Sed0019221 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-60
Identity = 181/372 (48.66%), Postives = 228/372 (61.29%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPP 60
           M+++NPFDLLG DDAEDPSQL  A+         + + + AA   QP K A  P+KP PP
Sbjct: 1   MASLNPFDLLG-DDAEDPSQLAVAL---------SQKVEKAAAAVQPPKAAKFPTKPAPP 60

Query: 61  AQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFN-----NENSSAPVDRETGK 120
           +QAVRE+RN + +GGRG G GG  G+ R R +GG+  D+ N     NEN  +   R   +
Sbjct: 61  SQAVRESRN-APQGGRG-GTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYRRPSE 120

Query: 121 TTEGRGYSGPRG--------RGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGS 180
             +G    G  G         G RRGG  NGE+ D ERP R ++RHS TG    +KR G 
Sbjct: 121 DADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGG 180

Query: 181 GRGNWGRSTDEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPED--- 240
           GRGNWG + D+    +EE   E EK+   EK   ED+   +  E  A+E  + E E+   
Sbjct: 181 GRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEA 240

Query: 241 KEMTLEEYEKLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKE-NNEIFAKLGSEKDK 300
           +EMTLEEYEK+LEEK+K+L A K EERKVD K F SMQQ+S+KK  + EIF KLGS+K+K
Sbjct: 241 REMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEK 300

Query: 301 RKEIADKEERTKKSLSINEFLKPAEGERQYGSGGRGRGR-GRGSRG-GYSGISTSNVAAP 354
           RK   D  E+ KKSLSINEFLKPA+G+R  G GG  RGR GRG RG G +       AAP
Sbjct: 301 RK---DATEKAKKSLSINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAP 357

[Close]

BLAST of Sed0019221 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 225.7 bits (574), Expect = 5.8e-59
Identity = 184/379 (48.55%), Postives = 232/379 (61.21%), Query Frame = 0


Query: 1   MSTVNPFDLLGDDDAEDPSQLIAAVKAAPPPKKGAAQTKTAALGAQPNKPASLPSKPLPP 60
           M++VNPFDLL DDDAEDPSQ++A+      P K  A  +TA       K   +P+KP PP
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVAS-----KPLKVVAPVQTA-------KSGKMPTKPPPP 60

Query: 61  AQAVREARNESGRGGRGNGRGGGRGYGRSRESGGFYNDSFNNENSSAPVDRETG--KTTE 120
           +QAVREARN  G GGRG GRGG  G G     GG   DS NN+  +       G  ++ E
Sbjct: 61  SQAVREARNAPG-GGRGAGRGGSYGRG---GRGGNNRDSRNNDGPANENGYGGGYRRSEE 120

Query: 121 GRG--YSGPRG--RGGRRGGFNN-GEATDGERPRRVFERHSGTGRENELKREGSGRGNWG 180
           G G    GP G  RG RRG ++N G++ D ERPR+ ++RHS T   NE KR+G+GR NWG
Sbjct: 121 GDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWG 180

Query: 181 RSTDEFAEVAEEAVNETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYE 240
            + D+   V EE+    +KN+  EK   E +A  +  E  A++ EE +PEDKEMTLEEYE
Sbjct: 181 TTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKEMTLEEYE 240

Query: 241 KLLEEKRKSLLALKAEERKVDPKEFASMQQISSKKENN-EIFAKLGSEKDKRKEIADKEE 300
           K+LEEK+K+L A K EERKVD K F +MQQ+SSKK NN E+F KLG+EKDKR  I ++EE
Sbjct: 241 KVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREE 300

Query: 301 RTKKSLSINEFLKPAEGERQYG-----SGGR-------------GRGRGRGSRGGYSGIS 354
           +T+KSLSINEFLKPA+G+  Y       GGR             GR    G R    G +
Sbjct: 301 KTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGA 359

[Close]

BLAST of Sed0019221 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 218.4 bits (555), Expect = 9.3e-57
Identity = 163/304 (53.62%), Postives = 197/304 (64.80%), Query Frame = 0


Query: 64  VREARNES-----GRGGRGNGRGG-GRGYGRSRESGGFYNDSFNNENSSAPVDRETGKTT 123
           VREAR+++     GRGG   GRGG  R  G +  SGG+   S   + S +  +R  G   
Sbjct: 48  VREARSDAPRGGGGRGGFNRGRGGYNRDDGNNGYSGGYTKPSGEGDVSKSSYERRGGGGA 107

Query: 124 EGRGYSGPRG--RGGRRGGFNNGEATDGERPRRVFERHSGTGRENELKREGSGRGNWGRS 183
               + G  G   GGRRGGF+N E  DGERPRR FER SGTGR ++ KR+GSGRGNWG  
Sbjct: 108 PRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTP 167

Query: 184 TDEFAEVAEEAVN-ETEKNVGDEKPVQEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEK 243
            +E A   E     ETEK+VG EKP  +D A  +N E+     EE EPEDKEMTL+EYEK
Sbjct: 168 GEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEPEDKEMTLDEYEK 227

Query: 244 LLEEKRKSLLALKAEERKVDPKEFASMQQISSKKENNEIFAKLGSEKDKRKEIADKEERT 303
           +LEEK+K+L +L   ERKVD K F SMQQ+S+KK N+EIF KLGS+KDKRK+  DKEE+ 
Sbjct: 228 ILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKRKD--DKEEKA 287

Query: 304 KKSLSINEFLKPAEGERQYGSGGRGRGRGRGSRGGYSGISTS---NVAAPSIEDPGQFPT 356
           KK++SINEFLKPAEG   Y  G  GRGRG   RGG S   +    N AAP+I D  QFP+
Sbjct: 288 KKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPS 345

[Close]

BLAST of Sed0019221 vs. TAIR 10
Match: AT4G16830.2 (Hyaluronan / mRNA binding family )

HSP 1 Score: 199.5 bits (506), Expect = 4.5e-51
Identity = 130/218 (59.63%), Postives = 154/218 (70.64%), Query Frame = 0


Query: 142 DGERPRRVFERHSGTGRENELKREGSGRGNWGRSTDEFAEVAEEAVN-ETEKNVGDEKPV 201
           DGERPRR FER SGTGR ++ KR+GSGRGNWG   +E A   E     ETEK+VG EKP 
Sbjct: 53  DGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPA 112

Query: 202 QEDDAGGSNAENAAKEPEETEPEDKEMTLEEYEKLLEEKRKSLLALKAEERKVDPKEFAS 261
            +D A  +N E+     EE EPEDKEMTL+EYEK+LEEK+K+L +L   ERKVD K F S
Sbjct: 113 VDDVAADANKEDTV--VEEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFES 172

Query: 262 MQQISSKKENNEIFAKLGSEKDKRKEIADKEERTKKSLSINEFLKPAEGERQYGSGGRGR 321
           MQQ+S+KK N+EIF KLGS+KDKRK+  DKEE+ KK++SINEFLKPAEG   Y  G  GR
Sbjct: 173 MQQLSNKKSNDEIFIKLGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGR 232

Query: 322 GRGRGSRGGYSGISTS---NVAAPSIEDPGQFPTLGAK 356
           GRG   RGG S   +    N AAP+I D  QFP+LG K
Sbjct: 233 GRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 265

The following BLAST results are available for this feature:

BLAST of Sed0019221 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959730.1	1.2e-151	86.39	RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata]	[more]
XP_023514394.1	2.7e-151	85.60	RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004144.1	8.8e-150	84.96	RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima]	[more]
XP_022959731.1	2.6e-149	85.52	RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata]	[more]
XP_023004145.1	4.4e-149	85.52	RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima]	[more]

BLAST of Sed0019221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	4.2e-70	53.68	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	1.4e-62	57.95	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
Q9LVT8	1.9e-59	48.66	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
O23593	8.2e-58	48.55	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of Sed0019221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H755	5.9e-152	86.39	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KVE4	4.2e-150	84.96	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H5P3	1.2e-149	85.52	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KTS3	2.1e-149	85.52	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EYL1	4.0e-148	83.29	RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita moschata ...	[more]

BLAST of Sed0019221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	3.0e-71	53.68	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	1.4e-60	48.66	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	5.8e-59	48.55	Hyaluronan / mRNA binding family	[more]
AT4G16830.3	9.3e-57	53.62	Hyaluronan / mRNA binding family	[more]
AT4G16830.2	4.5e-51	59.63	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..252
None	No IPR available	GENE3D	6.10.140.1040		coord: 144..257 e-value: 3.0E-9 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..228
None	No IPR available	PANTHER	PTHR12299:SF53	RGG REPEATS NUCLEAR RNA BINDING PROTEIN A	coord: 1..355
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 146..254 e-value: 4.6E-34 score: 129.1
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 146..253 e-value: 1.1E-25 score: 90.7
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..77 e-value: 7.3E-19 score: 68.4
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019221.1	Sed0019221.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003723	RNA binding