Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGATTTGATAAAAAAAAAAAAAAAAAAGCCTCCAAAAAAGATTCATTTTTCTCTTTTGGGTTCCCCAATTGATGAAATTACTTCATAATCTAATCAGCTTAAATTCAATGTATTCTTAAAATCAACCCCGGACATGCAAAAATAATGAAAGGAACGTGAGGGGTAAATCCGTAATTACGCACTGTAAAAAGGCTATAACAAATCGCGGACCACAATCCCATTACTCACAAATTCTCTGCCATGGCAACAATTCCGTGCTTAATCCTTCATCAACACTTCATCTTCTTCGTCTCTGCAATTCTAACCTCCATTTCCATTTCTTAATTTCTTCATCAATTAATCGAAATCGAAGCTTAATTGAATCGAAATTCTCAGCCATGTCTGATCGTGATCATAAACCTATTTTCTCCGATCCTCTGTTTTGTACTGTTTTCAGTTTCTCCGCCATTATTCTTCTCTACTTTCCTCAACTTCTACGGCGGATCCTCTTAACTCCGGTCTTCATCCTCGCCGGAATCCTCCTCCTCTCTCTCCTCCGACTCGGTGCAACTCAGAGATCGGTTCATATCAAAACAGAGAATCGATCTCGAACACTCTCTGAAATCGACTGTAAAGAATCCGAAACAGAGAGTCAATCTCAAACAGTCTCTGAAATTGAGAGCAAAGAATCGGCCAAAAGCGACGCCGCTGTACAATCGGAGGCCGTAATCGAAGGATCGAGCGCTTGTTTCGAGGAATCGTTCGTACAGTGGAACGTGAGAGCGCCGTTGGAAGTAATTTACGAAGATCTGTACGAAGGCGAAGATCTCGAGAAGGAAACGTCGAACGAGAGCGATCCGGAGCCCCGAATGGTGAGCGTCGGGTTGGATCGGTATCCGTCTCTGTCGCTGTACTATCCGGAAACGGATTCCGATACCTCGTCGGACGGAGCTTGGCCGGAATCGATGGAGGAGAATGTGTGTTTCATGTGGGATGAGGACGAAGACAGGGATGAACTGATCGAGATTTCGTTGGAGAAGACCAACAAGAAGCCGTTGGAGTTTCAGTTCGAGCCGGAGGATAATTTGATTGAGATCGACTTAACGCCGGTGAGTTTTCCGGCGTGTAATTCCTGGTGAGTTTTAGGTTTGGATTCATTGTTGATTAATTGCACGAATATATATTATATTTGTTTGGAATTCGGATTTATAGAAAGGAAAATATATATAGAGATAATATTCAATTAATTTTGTTTTGTGGAACGTGGAGAATCTGGACTTCTTTTTTGTACTTCGAATCTTGGAATTAATCGACACTTTGAACAGTGTAGTGCTTGTCATTGTTCAAACTTCAAAGCATGATTTCGT
mRNA sequence
AAAAGATTTGATAAAAAAAAAAAAAAAAAAGCCTCCAAAAAAGATTCATTTTTCTCTTTTGGGTTCCCCAATTGATGAAATTACTTCATAATCTAATCAGCTTAAATTCAATGTATTCTTAAAATCAACCCCGGACATGCAAAAATAATGAAAGGAACGTGAGGGGTAAATCCGTAATTACGCACTGTAAAAAGGCTATAACAAATCGCGGACCACAATCCCATTACTCACAAATTCTCTGCCATGGCAACAATTCCGTGCTTAATCCTTCATCAACACTTCATCTTCTTCGTCTCTGCAATTCTAACCTCCATTTCCATTTCTTAATTTCTTCATCAATTAATCGAAATCGAAGCTTAATTGAATCGAAATTCTCAGCCATGTCTGATCGTGATCATAAACCTATTTTCTCCGATCCTCTGTTTTGTACTGTTTTCAGTTTCTCCGCCATTATTCTTCTCTACTTTCCTCAACTTCTACGGCGGATCCTCTTAACTCCGGTCTTCATCCTCGCCGGAATCCTCCTCCTCTCTCTCCTCCGACTCGGTGCAACTCAGAGATCGGTTCATATCAAAACAGAGAATCGATCTCGAACACTCTCTGAAATCGACTGTAAAGAATCCGAAACAGAGAGTCAATCTCAAACAGTCTCTGAAATTGAGAGCAAAGAATCGGCCAAAAGCGACGCCGCTGTACAATCGGAGGCCGTAATCGAAGGATCGAGCGCTTGTTTCGAGGAATCGTTCGTACAGTGGAACGTGAGAGCGCCGTTGGAAGTAATTTACGAAGATCTGTACGAAGGCGAAGATCTCGAGAAGGAAACGTCGAACGAGAGCGATCCGGAGCCCCGAATGGTGAGCGTCGGGTTGGATCGGTATCCGTCTCTGTCGCTGTACTATCCGGAAACGGATTCCGATACCTCGTCGGACGGAGCTTGGCCGGAATCGATGGAGGAGAATGTGTGTTTCATGTGGGATGAGGACGAAGACAGGGATGAACTGATCGAGATTTCGTTGGAGAAGACCAACAAGAAGCCGTTGGAGTTTCAGTTCGAGCCGGAGGATAATTTGATTGAGATCGACTTAACGCCGGTGAGTTTTCCGGCGTGTAATTCCTGGTGAGTTTTAGGTTTGGATTCATTGTTGATTAATTGCACGAATATATATTATATTTGTTTGGAATTCGGATTTATAGAAAGGAAAATATATATAGAGATAATATTCAATTAATTTTGTTTTGTGGAACGTGGAGAATCTGGACTTCTTTTTTGTACTTCGAATCTTGGAATTAATCGACACTTTGAACAGTGTAGTGCTTGTCATTGTTCAAACTTCAAAGCATGATTTCGT
Coding sequence (CDS)
ATGTCTGATCGTGATCATAAACCTATTTTCTCCGATCCTCTGTTTTGTACTGTTTTCAGTTTCTCCGCCATTATTCTTCTCTACTTTCCTCAACTTCTACGGCGGATCCTCTTAACTCCGGTCTTCATCCTCGCCGGAATCCTCCTCCTCTCTCTCCTCCGACTCGGTGCAACTCAGAGATCGGTTCATATCAAAACAGAGAATCGATCTCGAACACTCTCTGAAATCGACTGTAAAGAATCCGAAACAGAGAGTCAATCTCAAACAGTCTCTGAAATTGAGAGCAAAGAATCGGCCAAAAGCGACGCCGCTGTACAATCGGAGGCCGTAATCGAAGGATCGAGCGCTTGTTTCGAGGAATCGTTCGTACAGTGGAACGTGAGAGCGCCGTTGGAAGTAATTTACGAAGATCTGTACGAAGGCGAAGATCTCGAGAAGGAAACGTCGAACGAGAGCGATCCGGAGCCCCGAATGGTGAGCGTCGGGTTGGATCGGTATCCGTCTCTGTCGCTGTACTATCCGGAAACGGATTCCGATACCTCGTCGGACGGAGCTTGGCCGGAATCGATGGAGGAGAATGTGTGTTTCATGTGGGATGAGGACGAAGACAGGGATGAACTGATCGAGATTTCGTTGGAGAAGACCAACAAGAAGCCGTTGGAGTTTCAGTTCGAGCCGGAGGATAATTTGATTGAGATCGACTTAACGCCGGTGAGTTTTCCGGCGTGTAATTCCTGGTGA
Protein sequence
MSDRDHKPIFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENRSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDLTPVSFPACNSW
Homology
BLAST of Sed0019218 vs. NCBI nr
Match:
XP_022926379.1 (uncharacterized protein LOC111433544 [Cucurbita moschata] >XP_022926380.1 uncharacterized protein LOC111433544 [Cucurbita moschata])
HSP 1 Score: 241.1 bits (614), Expect = 1.0e-59
Identity = 141/234 (60.26%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 9 IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS +T +
Sbjct: 31 ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTSD 90
Query: 69 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQ--SEAVIEGSSACFEESFVQWN 128
+ ++I+C+ES +++V+ ++S+ S AV S+ S ACFEESFVQWN
Sbjct: 91 NN---NQIECEES-----AESVAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWN 150
Query: 129 VRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAW 188
VRAPLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+ +
Sbjct: 151 VRAPLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNF 210
Query: 189 P-----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
P +S+++N+C MWDEDEDRDELIEI+L+KTNKK EF E EDNLIEI++
Sbjct: 211 PRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 254
BLAST of Sed0019218 vs. NCBI nr
Match:
XP_023518306.1 (uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 238.8 bits (608), Expect = 4.9e-59
Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0
Query: 11 SDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENRS 70
SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS +T + +
Sbjct: 46 SDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTNDNN 105
Query: 71 RTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSE---AVIEG-----------SSA 130
+IE +ESA+ DAAVQSE AV E S A
Sbjct: 106 --------------------YQIEYEESAEKDAAVQSESSTAVSESVSGGSKCADSVSCA 165
Query: 131 CFEESFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPET 190
CFEESFVQWNVRAPLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPET
Sbjct: 166 CFEESFVQWNVRAPLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPET 225
Query: 191 DSDTSSDGAWP-----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLI 236
DSD+SS+ +P +S+++N+C MWDEDEDRDELIEI+L+KTNKK EF E EDNLI
Sbjct: 226 DSDSSSEDNFPTTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLI 267
BLAST of Sed0019218 vs. NCBI nr
Match:
KAG6594629.1 (hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 235.7 bits (600), Expect = 4.2e-58
Identity = 137/232 (59.05%), Postives = 173/232 (74.57%), Query Frame = 0
Query: 9 IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS + +
Sbjct: 17 ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQIND 76
Query: 69 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
+ ++I+C+ES +++ + ES + + S+ S ACFEESFVQWNVR
Sbjct: 77 NN---NQIECEES---AENDAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWNVR 136
Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+ +P
Sbjct: 137 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPR 196
Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
+S+++N+C MWDEDEDRDELIEI+L+KTNKK EF E EDNLIEI++
Sbjct: 197 TGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 240
BLAST of Sed0019218 vs. NCBI nr
Match:
KAG7026597.1 (hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 235.7 bits (600), Expect = 4.2e-58
Identity = 137/232 (59.05%), Postives = 173/232 (74.57%), Query Frame = 0
Query: 9 IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS + +
Sbjct: 21 ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQIND 80
Query: 69 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
+ ++I+C+ES +++ + ES + + S+ S ACFEESFVQWNVR
Sbjct: 81 NN---NQIECEES---AENDAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWNVR 140
Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+ +P
Sbjct: 141 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPR 200
Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
+S+++N+C MWDEDEDRDELIEI+L+KTNKK EF E EDNLIEI++
Sbjct: 201 TGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 244
BLAST of Sed0019218 vs. NCBI nr
Match:
XP_023003982.1 (uncharacterized protein LOC111497433 [Cucurbita maxima] >XP_023003983.1 uncharacterized protein LOC111497433 [Cucurbita maxima])
HSP 1 Score: 233.8 bits (595), Expect = 1.6e-57
Identity = 137/237 (57.81%), Postives = 175/237 (73.84%), Query Frame = 0
Query: 9 IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
I SDPL T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS +T +
Sbjct: 31 ITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTND 90
Query: 69 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
+ ++I+C+ES +++ + ES + + S+ S CFEESFVQWNVR
Sbjct: 91 NN---NQIECEES---AENDAAVQSESSTAVSESVSGGSKCADSVSCKCFEESFVQWNVR 150
Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+ +P
Sbjct: 151 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPT 210
Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNL--IEIDLTPV 239
+S+++++C MWDEDEDRDELIEI+L+KTNKK EF E EDNL IEID++P+
Sbjct: 211 TGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEIDISPI 259
BLAST of Sed0019218 vs. ExPASy TrEMBL
Match:
A0A6J1EEY1 (uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC111433544 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 4.8e-60
Identity = 141/234 (60.26%), Postives = 178/234 (76.07%), Query Frame = 0
Query: 9 IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS +T +
Sbjct: 31 ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTSD 90
Query: 69 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQ--SEAVIEGSSACFEESFVQWN 128
+ ++I+C+ES +++V+ ++S+ S AV S+ S ACFEESFVQWN
Sbjct: 91 NN---NQIECEES-----AESVAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWN 150
Query: 129 VRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAW 188
VRAPLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+ +
Sbjct: 151 VRAPLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNF 210
Query: 189 P-----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
P +S+++N+C MWDEDEDRDELIEI+L+KTNKK EF E EDNLIEI++
Sbjct: 211 PRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 254
BLAST of Sed0019218 vs. ExPASy TrEMBL
Match:
A0A6J1KY66 (uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433 PE=4 SV=1)
HSP 1 Score: 233.8 bits (595), Expect = 7.7e-58
Identity = 137/237 (57.81%), Postives = 175/237 (73.84%), Query Frame = 0
Query: 9 IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
I SDPL T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS +T +
Sbjct: 31 ITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTND 90
Query: 69 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
+ ++I+C+ES +++ + ES + + S+ S CFEESFVQWNVR
Sbjct: 91 NN---NQIECEES---AENDAAVQSESSTAVSESVSGGSKCADSVSCKCFEESFVQWNVR 150
Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+ +P
Sbjct: 151 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPT 210
Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNL--IEIDLTPV 239
+S+++++C MWDEDEDRDELIEI+L+KTNKK EF E EDNL IEID++P+
Sbjct: 211 TGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEIDISPI 259
BLAST of Sed0019218 vs. ExPASy TrEMBL
Match:
A0A6J1CME6 (uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012458 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 6.1e-47
Identity = 136/248 (54.84%), Postives = 169/248 (68.15%), Query Frame = 0
Query: 10 FSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQR-SVHIKTEN 69
FSDPLF T+ +F A+ILL FP++ +L +PV +L G+LLLSLLRLGATQR HIK +N
Sbjct: 11 FSDPLFSTLLTFFALILLSFPRIFWPLLFSPVPLLTGLLLLSLLRLGATQRFPRHIKDKN 70
Query: 70 RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEG-----SSACFEESFV 129
+ ESE S++ V E ++ + DA V G S ACFEESFV
Sbjct: 71 QI---------ESEIGSRAAAVVPPEEEDRGRDDAVVSKLGGGGGICDIVSCACFEESFV 130
Query: 130 QWNVRAPLEVIYEDLYEGEDLEKETSNESDP----EPRMVSVGLDRYPSLSLYYPETDSD 189
QWNVRAPLEVIYE+ YEGED +K+ SNESDP EPR V V ++RYPSLSLYYPETDSD
Sbjct: 131 QWNVRAPLEVIYEE-YEGED-DKDVSNESDPFTETEPRPVPVRIERYPSLSLYYPETDSD 190
Query: 190 TSSD------GAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLE----FQFEPEDN 238
+SSD GAW +S+ +++CFMWD+ EDRDELIEI+L+KT K FQ E E+N
Sbjct: 191 SSSDDEFPIPGAW-DSL-DSLCFMWDDGEDRDELIEIALDKTTNKMKASSELFQLE-EEN 244
BLAST of Sed0019218 vs. ExPASy TrEMBL
Match:
A0A2N9IAY4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50959 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 114/257 (44.36%), Postives = 153/257 (59.53%), Query Frame = 0
Query: 8 PIFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTE 67
PI S PLF ++ SF +ILLYFP L RI+ +PV I+ GILL +LLRLGATQ ++ E
Sbjct: 37 PISSSPLFSSIVSFYTLILLYFPNLFLRIVFSPVIIITGILLFTLLRLGATQSQRFLENE 96
Query: 68 NRSR-------TLSEIDCKESETESQSQTVSEIESKES------------AKSDAAVQSE 127
+ I+ + ESQS++ S++ E +S+ SE
Sbjct: 97 VKDNMWRGQPDPAEAINESKENRESQSKSKSKMSEPEQMDLFEENSTWVICRSETQSDSE 156
Query: 128 AVIEGSSACFEESFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEPRMV-SVGLDRYP 187
S CFE+SFV+WNVRAPLE+IYE+ YEGE+ E+ DP+P+ G++RYP
Sbjct: 157 TGCYDSITCFEDSFVEWNVRAPLEIIYEE-YEGEEAEE------DPDPKWTRDSGIERYP 216
Query: 188 SLSLYYPETDSDTSSD------GAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLE 238
SLSLYYPE+DSD SSD G W E+ CF WDE EDR+ LIEI+L+ +K+ L+
Sbjct: 217 SLSLYYPESDSDDSSDCEFASIGEW--CSPESTCFTWDE-EDRESLIEIALDHGDKRDLD 276
BLAST of Sed0019218 vs. ExPASy TrEMBL
Match:
A0A0A0KLD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516950 PE=4 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 4.4e-37
Identity = 122/256 (47.66%), Postives = 144/256 (56.25%), Query Frame = 0
Query: 1 MSDRDHKPIFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQR 60
MS IFS PLF + SF +ILL+FP L LL+P +LAG L LSLLRLGATQR
Sbjct: 1 MSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPALVLAGFLFLSLLRLGATQR 60
Query: 61 SVHIKTENRSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEE 120
R R I T + Q + + E + + S+CFEE
Sbjct: 61 -------QRQRQHQPI------TITNPQPIKFTQPPEHCTGCSPI---------SSCFEE 120
Query: 121 SFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEP---------------RMVSVGLDR 180
SFVQWNVRAPLEVIYED YE ED E+E E + M ++R
Sbjct: 121 SFVQWNVRAPLEVIYED-YEEEDEEEEEEEEKEEGEVEVDEDKDKDDGTVLHMRLNSMER 180
Query: 181 YPSLSLYYPETDSDTSSDGAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFE 240
YPSLSLYYPETDSD+ S GA E ENVCFMWD DEDRDELIEI+L+K FQ E
Sbjct: 181 YPSLSLYYPETDSDSWS-GA--EDEMENVCFMWD-DEDRDELIEIALDKKRVSSEFFQLE 228
Query: 241 PEDNLIEIDLTPVSFP 242
E+NLIEID++P +FP
Sbjct: 241 -EENLIEIDISPTAFP 228
BLAST of Sed0019218 vs. TAIR 10
Match:
AT4G21500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )
HSP 1 Score: 97.8 bits (242), Expect = 1.3e-20
Identity = 92/246 (37.40%), Postives = 127/246 (51.63%), Query Frame = 0
Query: 10 FSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENR 69
FS PLF + ++IL+YFP L RI L+PV +++G LLLSLLRLG+T+
Sbjct: 11 FSHPLFSIFITLYSLILIYFPNDLLRIFLSPVLLISGALLLSLLRLGSTR---------- 70
Query: 70 SRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVRA 129
E +Q E E K +S+ + FV+WN+RA
Sbjct: 71 --------------EPNTQPDKSYEESEEPKVFLVRESDLM---------GGFVEWNLRA 130
Query: 130 PLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSD----TSSDGA 189
PLEVI+E YE E+ E+E E DP ++R+PSLSL YPE+DS+ +SS+
Sbjct: 131 PLEVIHE-AYEDEEEEEE---EEDPTRFR---KMERFPSLSLCYPESDSESDSASSSEFN 190
Query: 190 WPE----SMEENVCFMWDEDEDR---DELIEISLE-------KTNKKPLEFQFEPEDNLI 238
+PE + EN+ F W+EDE + LIEI L+ +K ++F E ED LI
Sbjct: 191 FPEIGDWNSPENMGFRWEEDEGGIGCEGLIEIKLDHYSHNRKMMSKTEIDFHAE-EDGLI 215
BLAST of Sed0019218 vs. TAIR 10
Match:
AT4G05018.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 66/229 (28.82%), Postives = 99/229 (43.23%), Query Frame = 0
Query: 10 FSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENR 69
FS PLF S I LLYFPQ RIL++ V +L G L+S L LG+T++S+ N
Sbjct: 13 FSHPLFSCFISLYTIFLLYFPQDSLRILISHVPLLIGAFLISCLHLGSTRKSIARPGSNE 72
Query: 70 SRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR- 129
E+ + F++WN +
Sbjct: 73 DSIGPELK------------------------------------TGLGLNPDFMEWNFKL 132
Query: 130 -APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP 189
APLEVI++ E+ E+ + DP R V + R+PSLS++ PE+DS+ D +P
Sbjct: 133 GAPLEVIHK-----EEEEQSMTGVKDP-TRFVMI--KRFPSLSMFNPESDSELDRD--FP 183
Query: 190 ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPE-DNLIEIDL 236
M EN D + LE++ K + ++ E DN + ID+
Sbjct: 193 -VMSEN-----------DPTRFVRLERSIKPESDMDYDSELDNNLVIDV 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022926379.1 | 1.0e-59 | 60.26 | uncharacterized protein LOC111433544 [Cucurbita moschata] >XP_022926380.1 unchar... | [more] |
XP_023518306.1 | 4.9e-59 | 59.43 | uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo] | [more] |
KAG6594629.1 | 4.2e-58 | 59.05 | hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7026597.1 | 4.2e-58 | 59.05 | hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023003982.1 | 1.6e-57 | 57.81 | uncharacterized protein LOC111497433 [Cucurbita maxima] >XP_023003983.1 uncharac... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EEY1 | 4.8e-60 | 60.26 | uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC1114335... | [more] |
A0A6J1KY66 | 7.7e-58 | 57.81 | uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433... | [more] |
A0A6J1CME6 | 6.1e-47 | 54.84 | uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A2N9IAY4 | 2.0e-37 | 44.36 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50959 PE=4 SV=1 | [more] |
A0A0A0KLD5 | 4.4e-37 | 47.66 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516950 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G21500.1 | 1.3e-20 | 37.40 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT4G05018.1 | 1.6e-07 | 28.82 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |