Sed0019218 (gene) Chayote v1

Overview
NameSed0019218
Typegene
OrganismSechium edule (Chayote v1)
DescriptionVID27-like protein
LocationLG10: 2012705 .. 2014053 (+)
RNA-Seq ExpressionSed0019218
SyntenySed0019218
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGATTTGATAAAAAAAAAAAAAAAAAAGCCTCCAAAAAAGATTCATTTTTCTCTTTTGGGTTCCCCAATTGATGAAATTACTTCATAATCTAATCAGCTTAAATTCAATGTATTCTTAAAATCAACCCCGGACATGCAAAAATAATGAAAGGAACGTGAGGGGTAAATCCGTAATTACGCACTGTAAAAAGGCTATAACAAATCGCGGACCACAATCCCATTACTCACAAATTCTCTGCCATGGCAACAATTCCGTGCTTAATCCTTCATCAACACTTCATCTTCTTCGTCTCTGCAATTCTAACCTCCATTTCCATTTCTTAATTTCTTCATCAATTAATCGAAATCGAAGCTTAATTGAATCGAAATTCTCAGCCATGTCTGATCGTGATCATAAACCTATTTTCTCCGATCCTCTGTTTTGTACTGTTTTCAGTTTCTCCGCCATTATTCTTCTCTACTTTCCTCAACTTCTACGGCGGATCCTCTTAACTCCGGTCTTCATCCTCGCCGGAATCCTCCTCCTCTCTCTCCTCCGACTCGGTGCAACTCAGAGATCGGTTCATATCAAAACAGAGAATCGATCTCGAACACTCTCTGAAATCGACTGTAAAGAATCCGAAACAGAGAGTCAATCTCAAACAGTCTCTGAAATTGAGAGCAAAGAATCGGCCAAAAGCGACGCCGCTGTACAATCGGAGGCCGTAATCGAAGGATCGAGCGCTTGTTTCGAGGAATCGTTCGTACAGTGGAACGTGAGAGCGCCGTTGGAAGTAATTTACGAAGATCTGTACGAAGGCGAAGATCTCGAGAAGGAAACGTCGAACGAGAGCGATCCGGAGCCCCGAATGGTGAGCGTCGGGTTGGATCGGTATCCGTCTCTGTCGCTGTACTATCCGGAAACGGATTCCGATACCTCGTCGGACGGAGCTTGGCCGGAATCGATGGAGGAGAATGTGTGTTTCATGTGGGATGAGGACGAAGACAGGGATGAACTGATCGAGATTTCGTTGGAGAAGACCAACAAGAAGCCGTTGGAGTTTCAGTTCGAGCCGGAGGATAATTTGATTGAGATCGACTTAACGCCGGTGAGTTTTCCGGCGTGTAATTCCTGGTGAGTTTTAGGTTTGGATTCATTGTTGATTAATTGCACGAATATATATTATATTTGTTTGGAATTCGGATTTATAGAAAGGAAAATATATATAGAGATAATATTCAATTAATTTTGTTTTGTGGAACGTGGAGAATCTGGACTTCTTTTTTGTACTTCGAATCTTGGAATTAATCGACACTTTGAACAGTGTAGTGCTTGTCATTGTTCAAACTTCAAAGCATGATTTCGT

mRNA sequence

AAAAGATTTGATAAAAAAAAAAAAAAAAAAGCCTCCAAAAAAGATTCATTTTTCTCTTTTGGGTTCCCCAATTGATGAAATTACTTCATAATCTAATCAGCTTAAATTCAATGTATTCTTAAAATCAACCCCGGACATGCAAAAATAATGAAAGGAACGTGAGGGGTAAATCCGTAATTACGCACTGTAAAAAGGCTATAACAAATCGCGGACCACAATCCCATTACTCACAAATTCTCTGCCATGGCAACAATTCCGTGCTTAATCCTTCATCAACACTTCATCTTCTTCGTCTCTGCAATTCTAACCTCCATTTCCATTTCTTAATTTCTTCATCAATTAATCGAAATCGAAGCTTAATTGAATCGAAATTCTCAGCCATGTCTGATCGTGATCATAAACCTATTTTCTCCGATCCTCTGTTTTGTACTGTTTTCAGTTTCTCCGCCATTATTCTTCTCTACTTTCCTCAACTTCTACGGCGGATCCTCTTAACTCCGGTCTTCATCCTCGCCGGAATCCTCCTCCTCTCTCTCCTCCGACTCGGTGCAACTCAGAGATCGGTTCATATCAAAACAGAGAATCGATCTCGAACACTCTCTGAAATCGACTGTAAAGAATCCGAAACAGAGAGTCAATCTCAAACAGTCTCTGAAATTGAGAGCAAAGAATCGGCCAAAAGCGACGCCGCTGTACAATCGGAGGCCGTAATCGAAGGATCGAGCGCTTGTTTCGAGGAATCGTTCGTACAGTGGAACGTGAGAGCGCCGTTGGAAGTAATTTACGAAGATCTGTACGAAGGCGAAGATCTCGAGAAGGAAACGTCGAACGAGAGCGATCCGGAGCCCCGAATGGTGAGCGTCGGGTTGGATCGGTATCCGTCTCTGTCGCTGTACTATCCGGAAACGGATTCCGATACCTCGTCGGACGGAGCTTGGCCGGAATCGATGGAGGAGAATGTGTGTTTCATGTGGGATGAGGACGAAGACAGGGATGAACTGATCGAGATTTCGTTGGAGAAGACCAACAAGAAGCCGTTGGAGTTTCAGTTCGAGCCGGAGGATAATTTGATTGAGATCGACTTAACGCCGGTGAGTTTTCCGGCGTGTAATTCCTGGTGAGTTTTAGGTTTGGATTCATTGTTGATTAATTGCACGAATATATATTATATTTGTTTGGAATTCGGATTTATAGAAAGGAAAATATATATAGAGATAATATTCAATTAATTTTGTTTTGTGGAACGTGGAGAATCTGGACTTCTTTTTTGTACTTCGAATCTTGGAATTAATCGACACTTTGAACAGTGTAGTGCTTGTCATTGTTCAAACTTCAAAGCATGATTTCGT

Coding sequence (CDS)

ATGTCTGATCGTGATCATAAACCTATTTTCTCCGATCCTCTGTTTTGTACTGTTTTCAGTTTCTCCGCCATTATTCTTCTCTACTTTCCTCAACTTCTACGGCGGATCCTCTTAACTCCGGTCTTCATCCTCGCCGGAATCCTCCTCCTCTCTCTCCTCCGACTCGGTGCAACTCAGAGATCGGTTCATATCAAAACAGAGAATCGATCTCGAACACTCTCTGAAATCGACTGTAAAGAATCCGAAACAGAGAGTCAATCTCAAACAGTCTCTGAAATTGAGAGCAAAGAATCGGCCAAAAGCGACGCCGCTGTACAATCGGAGGCCGTAATCGAAGGATCGAGCGCTTGTTTCGAGGAATCGTTCGTACAGTGGAACGTGAGAGCGCCGTTGGAAGTAATTTACGAAGATCTGTACGAAGGCGAAGATCTCGAGAAGGAAACGTCGAACGAGAGCGATCCGGAGCCCCGAATGGTGAGCGTCGGGTTGGATCGGTATCCGTCTCTGTCGCTGTACTATCCGGAAACGGATTCCGATACCTCGTCGGACGGAGCTTGGCCGGAATCGATGGAGGAGAATGTGTGTTTCATGTGGGATGAGGACGAAGACAGGGATGAACTGATCGAGATTTCGTTGGAGAAGACCAACAAGAAGCCGTTGGAGTTTCAGTTCGAGCCGGAGGATAATTTGATTGAGATCGACTTAACGCCGGTGAGTTTTCCGGCGTGTAATTCCTGGTGA

Protein sequence

MSDRDHKPIFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENRSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDLTPVSFPACNSW
Homology
BLAST of Sed0019218 vs. NCBI nr
Match: XP_022926379.1 (uncharacterized protein LOC111433544 [Cucurbita moschata] >XP_022926380.1 uncharacterized protein LOC111433544 [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 1.0e-59
Identity = 141/234 (60.26%), Postives = 178/234 (76.07%), Query Frame = 0

Query: 9   IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
           I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +T +
Sbjct: 31  ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTSD 90

Query: 69  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQ--SEAVIEGSSACFEESFVQWN 128
            +   ++I+C+ES     +++V+ ++S+ S     AV   S+     S ACFEESFVQWN
Sbjct: 91  NN---NQIECEES-----AESVAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWN 150

Query: 129 VRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAW 188
           VRAPLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+  +
Sbjct: 151 VRAPLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNF 210

Query: 189 P-----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
           P     +S+++N+C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNLIEI++
Sbjct: 211 PRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 254

BLAST of Sed0019218 vs. NCBI nr
Match: XP_023518306.1 (uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 4.9e-59
Identity = 145/244 (59.43%), Postives = 173/244 (70.90%), Query Frame = 0

Query: 11  SDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENRS 70
           SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +T + +
Sbjct: 46  SDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTNDNN 105

Query: 71  RTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSE---AVIEG-----------SSA 130
                                +IE +ESA+ DAAVQSE   AV E            S A
Sbjct: 106 --------------------YQIEYEESAEKDAAVQSESSTAVSESVSGGSKCADSVSCA 165

Query: 131 CFEESFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPET 190
           CFEESFVQWNVRAPLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPET
Sbjct: 166 CFEESFVQWNVRAPLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPET 225

Query: 191 DSDTSSDGAWP-----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLI 236
           DSD+SS+  +P     +S+++N+C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNLI
Sbjct: 226 DSDSSSEDNFPTTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLI 267

BLAST of Sed0019218 vs. NCBI nr
Match: KAG6594629.1 (hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 4.2e-58
Identity = 137/232 (59.05%), Postives = 173/232 (74.57%), Query Frame = 0

Query: 9   IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
           I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +  +
Sbjct: 17  ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQIND 76

Query: 69  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
            +   ++I+C+ES   +++    + ES  +     +  S+     S ACFEESFVQWNVR
Sbjct: 77  NN---NQIECEES---AENDAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWNVR 136

Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
           APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+  +P 
Sbjct: 137 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPR 196

Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
               +S+++N+C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNLIEI++
Sbjct: 197 TGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 240

BLAST of Sed0019218 vs. NCBI nr
Match: KAG7026597.1 (hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.7 bits (600), Expect = 4.2e-58
Identity = 137/232 (59.05%), Postives = 173/232 (74.57%), Query Frame = 0

Query: 9   IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
           I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +  +
Sbjct: 21  ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQIND 80

Query: 69  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
            +   ++I+C+ES   +++    + ES  +     +  S+     S ACFEESFVQWNVR
Sbjct: 81  NN---NQIECEES---AENDAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWNVR 140

Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
           APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+  +P 
Sbjct: 141 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPR 200

Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
               +S+++N+C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNLIEI++
Sbjct: 201 TGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 244

BLAST of Sed0019218 vs. NCBI nr
Match: XP_023003982.1 (uncharacterized protein LOC111497433 [Cucurbita maxima] >XP_023003983.1 uncharacterized protein LOC111497433 [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-57
Identity = 137/237 (57.81%), Postives = 175/237 (73.84%), Query Frame = 0

Query: 9   IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
           I SDPL  T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +T +
Sbjct: 31  ITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTND 90

Query: 69  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
            +   ++I+C+ES   +++    + ES  +     +  S+     S  CFEESFVQWNVR
Sbjct: 91  NN---NQIECEES---AENDAAVQSESSTAVSESVSGGSKCADSVSCKCFEESFVQWNVR 150

Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
           APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+  +P 
Sbjct: 151 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPT 210

Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNL--IEIDLTPV 239
               +S+++++C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNL  IEID++P+
Sbjct: 211 TGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEIDISPI 259

BLAST of Sed0019218 vs. ExPASy TrEMBL
Match: A0A6J1EEY1 (uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC111433544 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.8e-60
Identity = 141/234 (60.26%), Postives = 178/234 (76.07%), Query Frame = 0

Query: 9   IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
           I SDPLF T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +T +
Sbjct: 31  ITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTSD 90

Query: 69  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQ--SEAVIEGSSACFEESFVQWN 128
            +   ++I+C+ES     +++V+ ++S+ S     AV   S+     S ACFEESFVQWN
Sbjct: 91  NN---NQIECEES-----AESVAAVQSESSTAVSEAVSGGSKCADSVSCACFEESFVQWN 150

Query: 129 VRAPLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAW 188
           VRAPLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+  +
Sbjct: 151 VRAPLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNF 210

Query: 189 P-----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNLIEIDL 236
           P     +S+++N+C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNLIEI++
Sbjct: 211 PRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 254

BLAST of Sed0019218 vs. ExPASy TrEMBL
Match: A0A6J1KY66 (uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 7.7e-58
Identity = 137/237 (57.81%), Postives = 175/237 (73.84%), Query Frame = 0

Query: 9   IFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTEN 68
           I SDPL  T+ SF A+ LLYFP+LL RIL +P+F+L G LLLSLLRLGATQRS   +T +
Sbjct: 31  ITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLRLGATQRSFLRQTND 90

Query: 69  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR 128
            +   ++I+C+ES   +++    + ES  +     +  S+     S  CFEESFVQWNVR
Sbjct: 91  NN---NQIECEES---AENDAAVQSESSTAVSESVSGGSKCADSVSCKCFEESFVQWNVR 150

Query: 129 APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP- 188
           APLEVIYE+ YEGED +KE SNESDPEPR V +GL+RYPSLSLYYPETDSD+SS+  +P 
Sbjct: 151 APLEVIYEE-YEGEDHDKEASNESDPEPRQVRIGLERYPSLSLYYPETDSDSSSEDNFPT 210

Query: 189 ----ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPEDNL--IEIDLTPV 239
               +S+++++C MWDEDEDRDELIEI+L+KTNKK  EF  E EDNL  IEID++P+
Sbjct: 211 TGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEIDISPI 259

BLAST of Sed0019218 vs. ExPASy TrEMBL
Match: A0A6J1CME6 (uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012458 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 6.1e-47
Identity = 136/248 (54.84%), Postives = 169/248 (68.15%), Query Frame = 0

Query: 10  FSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQR-SVHIKTEN 69
           FSDPLF T+ +F A+ILL FP++   +L +PV +L G+LLLSLLRLGATQR   HIK +N
Sbjct: 11  FSDPLFSTLLTFFALILLSFPRIFWPLLFSPVPLLTGLLLLSLLRLGATQRFPRHIKDKN 70

Query: 70  RSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEG-----SSACFEESFV 129
           +          ESE  S++  V   E ++  + DA V       G     S ACFEESFV
Sbjct: 71  QI---------ESEIGSRAAAVVPPEEEDRGRDDAVVSKLGGGGGICDIVSCACFEESFV 130

Query: 130 QWNVRAPLEVIYEDLYEGEDLEKETSNESDP----EPRMVSVGLDRYPSLSLYYPETDSD 189
           QWNVRAPLEVIYE+ YEGED +K+ SNESDP    EPR V V ++RYPSLSLYYPETDSD
Sbjct: 131 QWNVRAPLEVIYEE-YEGED-DKDVSNESDPFTETEPRPVPVRIERYPSLSLYYPETDSD 190

Query: 190 TSSD------GAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLE----FQFEPEDN 238
           +SSD      GAW +S+ +++CFMWD+ EDRDELIEI+L+KT  K       FQ E E+N
Sbjct: 191 SSSDDEFPIPGAW-DSL-DSLCFMWDDGEDRDELIEIALDKTTNKMKASSELFQLE-EEN 244

BLAST of Sed0019218 vs. ExPASy TrEMBL
Match: A0A2N9IAY4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50959 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 114/257 (44.36%), Postives = 153/257 (59.53%), Query Frame = 0

Query: 8   PIFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTE 67
           PI S PLF ++ SF  +ILLYFP L  RI+ +PV I+ GILL +LLRLGATQ    ++ E
Sbjct: 37  PISSSPLFSSIVSFYTLILLYFPNLFLRIVFSPVIIITGILLFTLLRLGATQSQRFLENE 96

Query: 68  NRSR-------TLSEIDCKESETESQSQTVSEIESKES------------AKSDAAVQSE 127
            +             I+  +   ESQS++ S++   E              +S+    SE
Sbjct: 97  VKDNMWRGQPDPAEAINESKENRESQSKSKSKMSEPEQMDLFEENSTWVICRSETQSDSE 156

Query: 128 AVIEGSSACFEESFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEPRMV-SVGLDRYP 187
                S  CFE+SFV+WNVRAPLE+IYE+ YEGE+ E+      DP+P+     G++RYP
Sbjct: 157 TGCYDSITCFEDSFVEWNVRAPLEIIYEE-YEGEEAEE------DPDPKWTRDSGIERYP 216

Query: 188 SLSLYYPETDSDTSSD------GAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLE 238
           SLSLYYPE+DSD SSD      G W     E+ CF WDE EDR+ LIEI+L+  +K+ L+
Sbjct: 217 SLSLYYPESDSDDSSDCEFASIGEW--CSPESTCFTWDE-EDRESLIEIALDHGDKRDLD 276

BLAST of Sed0019218 vs. ExPASy TrEMBL
Match: A0A0A0KLD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516950 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.4e-37
Identity = 122/256 (47.66%), Postives = 144/256 (56.25%), Query Frame = 0

Query: 1   MSDRDHKPIFSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQR 60
           MS      IFS PLF  + SF  +ILL+FP  L   LL+P  +LAG L LSLLRLGATQR
Sbjct: 1   MSSSSSLSIFSHPLFSALLSFFTLILLFFPPFLWTSLLSPALVLAGFLFLSLLRLGATQR 60

Query: 61  SVHIKTENRSRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEE 120
                   R R    I      T +  Q +   +  E     + +         S+CFEE
Sbjct: 61  -------QRQRQHQPI------TITNPQPIKFTQPPEHCTGCSPI---------SSCFEE 120

Query: 121 SFVQWNVRAPLEVIYEDLYEGEDLEKETSNESDPEP---------------RMVSVGLDR 180
           SFVQWNVRAPLEVIYED YE ED E+E   E +                   M    ++R
Sbjct: 121 SFVQWNVRAPLEVIYED-YEEEDEEEEEEEEKEEGEVEVDEDKDKDDGTVLHMRLNSMER 180

Query: 181 YPSLSLYYPETDSDTSSDGAWPESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFE 240
           YPSLSLYYPETDSD+ S GA  E   ENVCFMWD DEDRDELIEI+L+K       FQ E
Sbjct: 181 YPSLSLYYPETDSDSWS-GA--EDEMENVCFMWD-DEDRDELIEIALDKKRVSSEFFQLE 228

Query: 241 PEDNLIEIDLTPVSFP 242
            E+NLIEID++P +FP
Sbjct: 241 -EENLIEIDISPTAFP 228

BLAST of Sed0019218 vs. TAIR 10
Match: AT4G21500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-20
Identity = 92/246 (37.40%), Postives = 127/246 (51.63%), Query Frame = 0

Query: 10  FSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENR 69
           FS PLF    +  ++IL+YFP  L RI L+PV +++G LLLSLLRLG+T+          
Sbjct: 11  FSHPLFSIFITLYSLILIYFPNDLLRIFLSPVLLISGALLLSLLRLGSTR---------- 70

Query: 70  SRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVRA 129
                         E  +Q     E  E  K     +S+ +           FV+WN+RA
Sbjct: 71  --------------EPNTQPDKSYEESEEPKVFLVRESDLM---------GGFVEWNLRA 130

Query: 130 PLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSD----TSSDGA 189
           PLEVI+E  YE E+ E+E   E DP        ++R+PSLSL YPE+DS+    +SS+  
Sbjct: 131 PLEVIHE-AYEDEEEEEE---EEDPTRFR---KMERFPSLSLCYPESDSESDSASSSEFN 190

Query: 190 WPE----SMEENVCFMWDEDEDR---DELIEISLE-------KTNKKPLEFQFEPEDNLI 238
           +PE    +  EN+ F W+EDE     + LIEI L+         +K  ++F  E ED LI
Sbjct: 191 FPEIGDWNSPENMGFRWEEDEGGIGCEGLIEIKLDHYSHNRKMMSKTEIDFHAE-EDGLI 215

BLAST of Sed0019218 vs. TAIR 10
Match: AT4G05018.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 66/229 (28.82%), Postives = 99/229 (43.23%), Query Frame = 0

Query: 10  FSDPLFCTVFSFSAIILLYFPQLLRRILLTPVFILAGILLLSLLRLGATQRSVHIKTENR 69
           FS PLF    S   I LLYFPQ   RIL++ V +L G  L+S L LG+T++S+     N 
Sbjct: 13  FSHPLFSCFISLYTIFLLYFPQDSLRILISHVPLLIGAFLISCLHLGSTRKSIARPGSNE 72

Query: 70  SRTLSEIDCKESETESQSQTVSEIESKESAKSDAAVQSEAVIEGSSACFEESFVQWNVR- 129
                E+                                     +       F++WN + 
Sbjct: 73  DSIGPELK------------------------------------TGLGLNPDFMEWNFKL 132

Query: 130 -APLEVIYEDLYEGEDLEKETSNESDPEPRMVSVGLDRYPSLSLYYPETDSDTSSDGAWP 189
            APLEVI++     E+ E+  +   DP  R V +   R+PSLS++ PE+DS+   D  +P
Sbjct: 133 GAPLEVIHK-----EEEEQSMTGVKDP-TRFVMI--KRFPSLSMFNPESDSELDRD--FP 183

Query: 190 ESMEENVCFMWDEDEDRDELIEISLEKTNKKPLEFQFEPE-DNLIEIDL 236
             M EN           D    + LE++ K   +  ++ E DN + ID+
Sbjct: 193 -VMSEN-----------DPTRFVRLERSIKPESDMDYDSELDNNLVIDV 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022926379.11.0e-5960.26uncharacterized protein LOC111433544 [Cucurbita moschata] >XP_022926380.1 unchar... [more]
XP_023518306.14.9e-5959.43uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo][more]
KAG6594629.14.2e-5859.05hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026597.14.2e-5859.05hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023003982.11.6e-5757.81uncharacterized protein LOC111497433 [Cucurbita maxima] >XP_023003983.1 uncharac... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EEY14.8e-6060.26uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC1114335... [more]
A0A6J1KY667.7e-5857.81uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433... [more]
A0A6J1CME66.1e-4754.84uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A2N9IAY42.0e-3744.36Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50959 PE=4 SV=1[more]
A0A0A0KLD54.4e-3747.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516950 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G21500.11.3e-2037.40unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G05018.11.6e-0728.82unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..99
NoneNo IPR availablePANTHERPTHR37746TRANSMEMBRANE PROTEINcoord: 8..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019218.1Sed0019218.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane