Sed0019170 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCATCTTTCTTTTTCTTTTGCAGGTTCAGCCAAACGTTGCTGGTAGGATTCTGCATGAGAAGGCATTAATGGTTAGAATAAGGGAGGTGGAGCTGAAGCTGCAGTCGCTTCAGAGGGTTGACGTACCGCCCTCGGGCCCCTCCGGTTTGACCTTCATTCCCGGCACCAATGGCCCTGGCTGCCCCCCTTAA ATGGTCATCTTTCTTTTTCTTTTGCAGGTTCAGCCAAACGTTGCTGGTAGGATTCTGCATGAGAAGGCATTAATGGTTAGAATAAGGGAGGTGGAGCTGAAGCTGCAGTCGCTTCAGAGGGTTGACGTACCGCCCTCGGGCCCCTCCGGTTTGACCTTCATTCCCGGCACCAATGGCCCTGGCTGCCCCCCTTAA ATGGTCATCTTTCTTTTTCTTTTGCAGGTTCAGCCAAACGTTGCTGGTAGGATTCTGCATGAGAAGGCATTAATGGTTAGAATAAGGGAGGTGGAGCTGAAGCTGCAGTCGCTTCAGAGGGTTGACGTACCGCCCTCGGGCCCCTCCGGTTTGACCTTCATTCCCGGCACCAATGGCCCTGGCTGCCCCCCTTAA MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCPP Homology
BLAST of Sed0019170 vs. NCBI nr
Match: KGN56901.1 (hypothetical protein Csa_009866 [Cucumis sativus]) HSP 1 Score: 97.1 bits (240), Expect = 6.0e-17 Identity = 49/63 (77.78%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of Sed0019170 vs. NCBI nr
Match: KAA0049291.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 3.0e-16 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of Sed0019170 vs. NCBI nr
Match: TYK17267.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 3.0e-16 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of Sed0019170 vs. NCBI nr
Match: KAG6582361.1 (hypothetical protein SDJN03_22363, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.8 bits (216), Expect = 3.7e-14 Identity = 46/66 (69.70%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Sed0019170 vs. NCBI nr
Match: KAG6597386.1 (hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028845.1 hypothetical protein SDJN02_10027, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.0 bits (214), Expect = 6.3e-14 Identity = 48/67 (71.64%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Sed0019170 vs. ExPASy TrEMBL
Match: A0A0A0LA00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G142940 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17 Identity = 49/63 (77.78%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of Sed0019170 vs. ExPASy TrEMBL
Match: A0A5D3CZY7 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001200 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of Sed0019170 vs. ExPASy TrEMBL
Match: A0A5A7U6N3 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005320 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of Sed0019170 vs. ExPASy TrEMBL
Match: A0A5N6QYI5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008369 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.7e-07 Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Sed0019170 vs. ExPASy TrEMBL
Match: A0A5N6R1J5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_008371 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06 Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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