Sed0019152 (gene) Chayote v1

Overview


Name	Sed0019152
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor TRY
Location	LG05: 2899668 .. 2902151 (+)
RNA-Seq Expression	Sed0019152
Synteny	Sed0019152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGCCTTCACCTTTTCCCACTGTATAGTGATGTTCCATTTTGCTTGGATTTCTTGAATCTGACATTGTTTGCTGTCTATCAATGTTTCAACTCTCTAATACCCTCTCTATTATTTTTCCATGACCATGATTGTCTGGATCAACTTATTTGCATCATAACTATTCTCAAAGTCCAATCATCTATTTGGTTATCAAGAAAATCCTAAAATTACACTTGCACCAAGAGAAATGAAAGAATAACAAGGACAGACAAAAAAAAAAAGTCTGAATCCTACCTACGAAGAAAGGTGAAACTATATCATTACTCTCTTCCTGCAAAGCGGGTCGGATCCAACAATAATTAGCATATATCCTCGACTAAAAGGTCACAAGTTCAAATTCTTCCATCCTCAAACATTGTAGTACTAAAAAAATATCATTACCCTCTTCCTACCACCATCTCTCTCTCACTCTTTCTCTCTCATGATGTGTGTGTGAACAAATCATAGAAGCATGTGAAGAAAGGGAAGTAGAAGGGAGGGAGGGAAAAGATGAATACATATTTCTAAAGAGACAAAATAATTTTGTATTCATTTGCATGTCCTTGCCAAAGGAGGGACTGGTGCAATTGGAATACTGAACACAACTTCAGGATAAGATGTGTCATATCTCTCTCTCATTCTGAATTTTGTGTGTGCAGTTTGGGAAGAAGGTTAGCTGAACTGAACACAAACACTAGACCACTTGCCCAGGTCCTCCTCAACTACCAGTTGAATGTTAGGGTGAGATTAGAAGCCTCTGCTCTGCCTAAAACAATCACAATGAAGCAATCAGGTGACAAATCAAAGAGTTTAAGGCACCCATTTCAAGCTGTAGCCTGTATTATTAAACCAAGACTATAGCCCATGATTATTCGTCTGCTTCTGCTCGTCTGTTTTTAAGTTGGTTTTGAGTTTATATTCACATTTTCTATAACCGGGAATCGGTGTTTCGCCCCATTCCATACTCAGGGGCATCTATGTCCGTCTTGTGGCTCCGATTTTTTTTTTTTTGAAACAAGGTAACCACGCCCGTCCTTAGGCCAGGCACCGGAGATATCGAAGGAGTAATGTCACAGGTGAATCTTGAACCTGGAACCTTGAAGGGAGCATACCTTTAAAACCCAAGTCTTCAACCATTGCGTCACCCCTTGAGGACAACTCAGAATTTTATATCCACGCCTTTGGTTATGGCAACAGCCTACTTTTTTCGTGACATCTCTAGATCCAAACAGAATGAAACTACTGCATGACCTTCCACCTAGAACAGCTCTCTTCTTCTCTCTCTCTAAGTTTTCAATATTTTATTCTTGTCTTTTTTCTCTCCGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAACCAACAAACTTACTTCCCAAAGTTTGGTGGGCAGAGGAGAATATAGGCATTAACATAAACTTAAATTTCCCTGTGGAAGTTTCAAATCTCTCCATCATAGTTTTTCCAAAAATTCTTTCATCCCCAATTCTCTACCTTCCTGTTTTTGTGGTGCCTCTAATCTGTGGGGAAATATGGACAACCATCGTCACCAGAAACAAGCTAAAATCACTACACAAGACTCTGAAGGTTTCTTTCATCAAAATGATTTTCTACTTTCTATGTCCAAATTCCAATTACTTAATCCTGAAGTTGGGTCTCTTTTCTTCATGATTTTCTCACTTTTTATGGCTTATTTATCTTAACAGAAGTCAGCAGCACTAGGTGGCAATTAATAACCATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTACACAAATTTACAGAATTATCACACCTTTCTCAACAAGAATGGAGATAGATTATTCTTCTCTCTCTCTCTTTCTCTCCCCTTCATTTCTTTCTAATTACCTCTAGCATCTGAGTTTCTAAGACAACGGCTTTTCATTTCAGGTGGGATCTGATAGCAGGCAGAATTCCGGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGATTTGGAGAGAGAAGTAGAAGAGGGTGAGAGAAACAGAGAGATGAAGGGTTTGGAGAGAGAAGAAGAGGATGAGAAAGACAAAAGAGATACAGGCAGTGAGGGTCAGTCAATTAGTGTTCAAAGGCTTCTGTTGGGTTCTCTACTTTCATTTTTATGTTTCCCTACTGCAAGTACCTTTTTAAGAGCAAATGGTATGGAACTGAGCTATTTTTTTATCAATCAAATAACACAGTAATTTTACCATGTGGGGTTCACTTTCCATTCTTTTATGTGTGCGCGATCGTAATTTTACCATGTGGGGTTCATTTTTCTACTTCAGGTAATCTTTATTATTTTACTCCCATGTCACTGTTTTAGAAGAATTATATGAACAGTAGATTCCATGGGCTCAGCTCAAATGAAGGACTTAATGCAGTTAGCATTTAGAAGATTGTTTGATG

mRNA sequence

CCTGCCTTCACCTTTTCCCACTGTATAGTGATGTTCCATTTTGCTTGGATTTCTTGAATCTGACATTGTTTGCTGTCTATCAATGTTTCAACTCTCTAATACCCTCTCTATTATTTTTCCATGACCATGATTGTCTGGATCAACTTATTTGCATCATAACTATTCTCAAAGTCCAATCATCTATTTGGTTATCAAGAAAATCCTAAAATTACACTTGCACCAAGAGAAATGAAAGAATAACAAGGACAGACAAAAAAAAAAAGTCTGAATCCTACCTACGAAGAAAGGTGAAACTATATCATTACTCTCTTCCTGCAAAGCGGGTCGGATCCAACAATAATTAGCATATATCCTCGACTAAAAGGTCACAAGTTCAAATTCTTCCATCCTCAAACATTGTAGTACTAAAAAAATATCATTACCCTCTTCCTACCACCATCTCTCTCTCACTCTTTCTCTCTCATGATGTGTGTGTGAACAAATCATAGAAGCATGTGAAGAAAGGGAAGTAGAAGGGAGGGAGGGAAAAGATGAATACATATTTCTAAAGAGACAAAATAATTTTGTATTCATTTGCATGTCCTTGCCAAAGGAGGGACTGGTGCAATTGGAATACTGAACACAACTTCAGGATAAGATGTGTCATATCTCTCTCTCATTCTGAATTTTGTGTGTGCAGTTTGGGAAGAAGGTTAGCTGAACTGAACACAAACACTAGACCACTTGCCCAGGTCCTCCTCAACTACCAGTTGAATGTTAGGGTGAGATTAGAAGCCTCTGCTCTGCCTAAAACAATCACAATGAAGCAATCAGGTGACAAATCAAAGAGTTTAAGGCACCCATTTCAAGCTGTAGCCTGTATTATTAAACCAAGACTATAGCCCATGATTATTCGTCTGCTTCTGCTCGTCTGTTTTTAAGTTGGTTTTGAGTTTATATTCACATTTTCTATAACCGGGAATCGGTGTTTCGCCCCATTCCATACTCAGGGGCATCTATGTCCGTCTTGTGGCTCCGATTTTTTTTTTTTTGAAACAAGGTAACCACGCCCGTCCTTAGGCCAGGCACCGGAGATATCGAAGGAGTAATGTCACAGGTGAATCTTGAACCTGGAACCTTGAAGGGAGCATACCTTTAAAACCCAAGTCTTCAACCATTGCGTCACCCCTTGAGGACAACTCAGAATTTTATATCCACGCCTTTGGTTATGGCAACAGCCTACTTTTTTCGTGACATCTCTAGATCCAAACAGAATGAAACTACTGCATGACCTTCCACCTAGAACAGCTCTCTTCTTCTCTCTCTCTAAGTTTTCAATATTTTATTCTTGTCTTTTTTCTCTCCGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAACCAACAAACTTACTTCCCAAAGTTTGGTGGGCAGAGGAGAATATAGGCATTAACATAAACTTAAATTTCCCTGTGGAAGTTTCAAATCTCTCCATCATAGTTTTTCCAAAAATTCTTTCATCCCCAATTCTCTACCTTCCTGTTTTTGTGGTGCCTCTAATCTGTGGGGAAATATGGACAACCATCGTCACCAGAAACAAGCTAAAATCACTACACAAGACTCTGAAGAAGTCAGCAGCACTAGGTGGCAATTAATAACCATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCGGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGATTTGGAGAGAGAAGTAGAAGAGGGTGAGAGAAACAGAGAGATGAAGGGTTTGGAGAGAGAAGAAGAGGATGAGAAAGACAAAAGAGATACAGGCAGTGAGGGTCAGTCAATTAGTGTTCAAAGGCTTCTGTTGGGTTCTCTACTTTCATTTTTATGTTTCCCTACTGCAAGTACCTTTTTAAGAGCAAATGGTATGGAACTGAGCTATTTTTTTATCAATCAAATAACACAGTAATTTTACCATGTGGGGTTCACTTTCCATTCTTTTATGTGTGCGCGATCGTAATTTTACCATGTGGGGTTCATTTTTCTACTTCAGGTAATCTTTATTATTTTACTCCCATGTCACTGTTTTAGAAGAATTATATGAACAGTAGATTCCATGGGCTCAGCTCAAATGAAGGACTTAATGCAGTTAGCATTTAGAAGATTGTTTGATG

Coding sequence (CDS)

ATGGACAACCATCGTCACCAGAAACAAGCTAAAATCACTACACAAGACTCTGAAGAAGTCAGCAGCACTAGGTGGCAATTAATAACCATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCGGGGCGTAAACCGGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGATTTGGAGAGAGAAGTAGAAGAGGGTGA

Protein sequence

MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGERSRRG

Homology

[Close]

BLAST of Sed0019152 vs. NCBI nr
Match: XP_016898876.1 (PREDICTED: transcription factor TRY [Cucumis melo] >KAA0042563.1 transcription factor TRY [Cucumis melo var. makuwa] >TYK05967.1 transcription factor TRY [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKI+  DSEEVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGFG+R R
Sbjct: 61 PEEIERYWIMTHLEGFGKRRR 81

[Close]

BLAST of Sed0019152 vs. NCBI nr
Match: XP_038875738.1 (transcription factor TRY [Benincasa hispida])

HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKIT  +SEEVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKITLLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGFG+R R
Sbjct: 61 PEEIERYWIMTHLEGFGKRRR 81

[Close]

BLAST of Sed0019152 vs. NCBI nr
Match: XP_022159377.1 (transcription factor TRY-like isoform X2 [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 75/81 (92.59%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHR QKQ KIT  DSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRQQKQPKITPLDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGF ER R
Sbjct: 61 PEEIERYWIMTHLEGFAERRR 81

[Close]

BLAST of Sed0019152 vs. NCBI nr
Match: XP_031742154.1 (transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription factor [Cucumis sativus] >KGN49883.1 hypothetical protein Csa_000375 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.4e-34
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQK AKI+  +SEEVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGFG+R R
Sbjct: 61 PEEIERYWIMTHLEGFGKRRR 81

[Close]

BLAST of Sed0019152 vs. NCBI nr
Match: XP_022159376.1 (transcription factor TRY-like isoform X1 [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 2.7e-33
Identity = 75/82 (91.46%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSE-EVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGR 60
          MDNHR QKQ KIT  DSE EVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGR
Sbjct: 1  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGR 60

Query: 61 KPEEIERYWIMTHLEGFGERSR 82
          KPEEIERYWIMTHLEGF ER R
Sbjct: 61 KPEEIERYWIMTHLEGFAERRR 82

[Close]

BLAST of Sed0019152 vs. ExPASy Swiss-Prot
Match: Q8GV05 (Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-25
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 0


Query: 2  DNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKP 61
          D  R +KQ KI   DSEEVSS  W+ I MT QEEDLI RM++L+GDRWDLIAGR+PGR+P
Sbjct: 5  DRRRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQP 64

Query: 62 EEIERYWIMTHLEGFGERSRR 83
          EEIERYWIM + EGF ++ R+
Sbjct: 65 EEIERYWIMRNSEGFADKRRQ 85

[Close]

BLAST of Sed0019152 vs. ExPASy Swiss-Prot
Match: O22059 (Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-20
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 5  RHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEI
Sbjct: 13 RRRRQSKAKASCSEEVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEI 72

Query: 65 ERYWIMTHLEGFGERSR 82
          ERYW+M H   F  R R
Sbjct: 73 ERYWLMKHGVVFANRRR 89

[Close]

BLAST of Sed0019152 vs. ExPASy Swiss-Prot
Match: Q9M157 (MYB-like transcription factor ETC3 OS=Arabidopsis thaliana OX=3702 GN=ETC3 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-20
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1  MDNHRHQKQAK---ITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIP 60
          MDNHR  KQ K   I T  SEEVSS  W+++ M+ +EEDL+ RMHKL+GDRW+LIAGRIP
Sbjct: 1  MDNHRRTKQPKTNSIVTSSSEEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIP 60

Query: 61 GRKPEEIERYWIM 71
          GR   EIER+W+M
Sbjct: 61 GRTAGEIERFWVM 73

[Close]

BLAST of Sed0019152 vs. ExPASy Swiss-Prot
Match: B3H4X8 (MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-20
Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 5  RHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R +KQ+K T  D+ EV+S +W+ I MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++I
Sbjct: 11 RSRKQSKFTLGDTAEVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDI 70

Query: 65 ERYWIMTHLEGFGERSRR 83
          ERYWIM + +    + RR
Sbjct: 71 ERYWIMRNCDHCSHKRRR 88

[Close]

BLAST of Sed0019152 vs. ExPASy Swiss-Prot
Match: Q84RD1 (MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-19
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 8  KQAKITTQ--DSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIE 67
          +Q K T    DSEEVSS  W+ I+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIE
Sbjct: 16 RQTKFTRSRYDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIE 75

Query: 68 RYWIMTHLEGFGERSRR 83
          RYWIM + + F  + RR
Sbjct: 76 RYWIMRNSDYFSHKRRR 92

[Close]

BLAST of Sed0019152 vs. ExPASy TrEMBL
Match: A0A5D3C2B2 (Transcription factor TRY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00630 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.1e-36
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKI+  DSEEVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGFG+R R
Sbjct: 61 PEEIERYWIMTHLEGFGKRRR 81

[Close]

BLAST of Sed0019152 vs. ExPASy TrEMBL
Match: A0A1S4DSB1 (transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.1e-36
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQKQAKI+  DSEEVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKQAKISPLDSEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGFG+R R
Sbjct: 61 PEEIERYWIMTHLEGFGKRRR 81

[Close]

BLAST of Sed0019152 vs. ExPASy TrEMBL
Match: A0A6J1DZP2 (transcription factor TRY-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025794 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.3e-35
Identity = 75/81 (92.59%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHR QKQ KIT  DSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRQQKQPKITPLDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGF ER R
Sbjct: 61 PEEIERYWIMTHLEGFAERRR 81

[Close]

BLAST of Sed0019152 vs. ExPASy TrEMBL
Match: I6NF75 (R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
          MDNHRHQK AKI+  +SEEVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 1  MDNHRHQKPAKISPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60

Query: 61 PEEIERYWIMTHLEGFGERSR 82
          PEEIERYWIMTHLEGFG+R R
Sbjct: 61 PEEIERYWIMTHLEGFGKRRR 81

[Close]

BLAST of Sed0019152 vs. ExPASy TrEMBL
Match: A0A6J1E3Q8 (transcription factor TRY-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025794 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33
Identity = 75/82 (91.46%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 1  MDNHRHQKQAKITTQDSE-EVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGR 60
          MDNHR QKQ KIT  DSE EVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGR
Sbjct: 1  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGR 60

Query: 61 KPEEIERYWIMTHLEGFGERSR 82
          KPEEIERYWIMTHLEGF ER R
Sbjct: 61 KPEEIERYWIMTHLEGFAERRR 82

[Close]

BLAST of Sed0019152 vs. TAIR 10
Match: AT5G53200.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 0


Query: 2  DNHRHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKP 61
          D  R +KQ KI   DSEEVSS  W+ I MT QEEDLI RM++L+GDRWDLIAGR+PGR+P
Sbjct: 5  DRRRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQP 64

Query: 62 EEIERYWIMTHLEGFGERSRR 83
          EEIERYWIM + EGF ++ R+
Sbjct: 65 EEIERYWIMRNSEGFADKRRQ 85

[Close]

BLAST of Sed0019152 vs. TAIR 10
Match: AT2G46410.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-21
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 5  RHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEI
Sbjct: 13 RRRRQSKAKASCSEEVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEI 72

Query: 65 ERYWIMTHLEGFGERSR 82
          ERYW+M H   F  R R
Sbjct: 73 ERYWLMKHGVVFANRRR 89

[Close]

BLAST of Sed0019152 vs. TAIR 10
Match: AT4G01060.3 (CAPRICE-like MYB3 )

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1  MDNHRHQKQAK---ITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIP 60
          MDNHR  KQ K   I T  SEEVSS  W+++ M+ +EEDL+ RMHKL+GDRW+LIAGRIP
Sbjct: 1  MDNHRRTKQPKTNSIVTSSSEEVSSLEWEVVNMSQEEEDLVSRMHKLVGDRWELIAGRIP 60

Query: 61 GRKPEEIERYWIM 71
          GR   EIER+W+M
Sbjct: 61 GRTAGEIERFWVM 73

[Close]

BLAST of Sed0019152 vs. TAIR 10
Match: AT2G30424.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 2.5e-21
Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 5  RHQKQAKITTQDSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEI 64
          R +KQ+K T  D+ EV+S +W+ I MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++I
Sbjct: 11 RSRKQSKFTLGDTAEVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDI 70

Query: 65 ERYWIMTHLEGFGERSRR 83
          ERYWIM + +    + RR
Sbjct: 71 ERYWIMRNCDHCSHKRRR 88

[Close]

BLAST of Sed0019152 vs. TAIR 10
Match: AT2G30420.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.6e-20
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 8  KQAKITTQ--DSEEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIE 67
          +Q K T    DSEEVSS  W+ I+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIE
Sbjct: 16 RQTKFTRSRYDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIE 75

Query: 68 RYWIMTHLEGFGERSRR 83
          RYWIM + + F  + RR
Sbjct: 76 RYWIMRNSDYFSHKRRR 92

The following BLAST results are available for this feature:

BLAST of Sed0019152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898876.1	1.7e-35	92.59	PREDICTED: transcription factor TRY [Cucumis melo] >KAA0042563.1 transcription f...	[more]
XP_038875738.1	1.7e-35	92.59	transcription factor TRY [Benincasa hispida]	[more]
XP_022159377.1	1.1e-34	92.59	transcription factor TRY-like isoform X2 [Momordica charantia]	[more]
XP_031742154.1	2.4e-34	90.12	transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription fact...	[more]
XP_022159376.1	2.7e-33	91.46	transcription factor TRY-like isoform X1 [Momordica charantia]	[more]

BLAST of Sed0019152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GV05	1.6e-25	65.43	Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1	[more]
O22059	1.6e-20	59.74	Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1	[more]
Q9M157	2.1e-20	63.01	MYB-like transcription factor ETC3 OS=Arabidopsis thaliana OX=3702 GN=ETC3 PE=2 ...	[more]
B3H4X8	3.5e-20	56.41	MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 ...	[more]
Q84RD1	2.3e-19	59.74	MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 ...	[more]

BLAST of Sed0019152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2B2	8.1e-36	92.59	Transcription factor TRY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4DSB1	8.1e-36	92.59	transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1	[more]
A0A6J1DZP2	5.3e-35	92.59	transcription factor TRY-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
I6NF75	1.2e-34	90.12	R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1	[more]
A0A6J1E3Q8	1.3e-33	91.46	transcription factor TRY-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Sed0019152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53200.1	1.2e-26	65.43	Homeodomain-like superfamily protein	[more]
AT2G46410.1	1.1e-21	59.74	Homeodomain-like superfamily protein	[more]
AT4G01060.3	1.5e-21	63.01	CAPRICE-like MYB3	[more]
AT2G30424.1	2.5e-21	56.41	Homeodomain-like superfamily protein	[more]
AT2G30420.1	1.6e-20	59.74	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 26..74 e-value: 2.7E-5 score: 33.6
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..68 e-value: 2.69283E-6 score: 38.3254
None	No IPR available	GENE3D	1.10.10.60		coord: 30..74 e-value: 1.9E-9 score: 39.3
None	No IPR available	PANTHER	PTHR47998:SF12	MYB-LIKE TRANSCRIPTION FACTOR ETC3	coord: 1..80
None	No IPR available	PANTHER	PTHR47998	TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1	coord: 1..80
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 31..69 e-value: 3.1E-7 score: 30.5
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 31..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019152.1	Sed0019152.1	mRNA