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Sed0019145 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTATTTGGAAACGTACACTAAGGGACAGTACCCTCCAATGAGCCCAAGACTGTCCTTCTCCAAGGACTTCGTCCAAACCCATAACCCCACAACTCATCATCCAAAAATGAGCCACTCAGACTCGAAGGACTTCGAATTCTCCGCACCCATCAACCCCCTTGACCAACCGCCCATGGCCGCCGCCGACAAGCTCTTCTTCAACGGAAAATTGCTGCCCACTCTCCGGGACGAGCTTCTCCTCGGCGACGATGACGACATGTCGCCCAAAGCCTCCCCCCCCAAATGGAAGCATTTTTTTGGCCTTAAGAGATCGGTCGATGGGCGCTGCACTGCCGCTACTAGTCAAGGCAAAATCCCCAAATTAGCACTCGACGATAACCCCCAAATTCCCACTTCCCGATCTGTGCTTTTTTGATGTTTGTTTTTTTTTTTTAAGGTTAATTGTGATTTTGTTCCATTGTCTGAGCTCATTGGTATATTTTGGTTGTTTCTGTACAAATTTGTGTGTGACAGCTTTGTGATTTGTGTTTTGCAGTTGTAACAGCATTTGTCTTTGCTAGTTTTTATCATTATTCGTGAATTTCAACCACTGGTTTTTTAGATGTTTGCCTTATTTTTCTGGTATATTTTGACCAATTATTATTAAGGGAATTTGCGTTCAACATCAAATTCTATCTCTTGTATTAGTTCTGGAATATAATTTCTAAAATAATTGAATGTATAGCACATTAGACATCTATCAATAATTAGTGATTCCAATTTCTCAAAAAAAAAAAAAAATTAGTGATTGACATTTATCACTAATGAGTGATAGAACTCAATTTGAATTTTTTACTACAAATGAATTAATTTTGGTTTTGTGCTATAGGTGTAAATATTTTGTCATTTTTTATTTTGTTTAATTAGGTATTTTTGACAAAGACCAAACCGCAGTTGAAACTTTTTGAACATTTTCTTTTTGAATTCTAAATAAATCTCGAGTTTGGAATCGAGAGACAGAGAAAAAAAAAAAAGAGAATGAACACAAAAAGAGGAAAGTATTAA ATGGGTTATTTGGAAACGTACACTAAGGGACAGTACCCTCCAATGAGCCCAAGACTGTCCTTCTCCAAGGACTTCGTCCAAACCCATAACCCCACAACTCATCATCCAAAAATGAGCCACTCAGACTCGAAGGACTTCGAATTCTCCGCACCCATCAACCCCCTTGACCAACCGCCCATGGCCGCCGCCGACAAGCTCTTCTTCAACGGAAAATTGCTGCCCACTCTCCGGGACGAGCTTCTCCTCGGCGACGATGACGACATGTCGCCCAAAGCCTCCCCCCCCAAATGGAAGCATTTTTTTGGCCTTAAGAGATCGGTCGATGGGCGCTGCACTGCCGCTACTAGTCAAGGCAAAATCCCCAAATTAGCACTCGACGATAACCCCCAAATTCCCACTTCCCGATCTTTTGGAATCGAGAGACAGAGAAAAAAAAAAAAGAGAATGAACACAAAAAGAGGAAAGTATTAA ATGGGTTATTTGGAAACGTACACTAAGGGACAGTACCCTCCAATGAGCCCAAGACTGTCCTTCTCCAAGGACTTCGTCCAAACCCATAACCCCACAACTCATCATCCAAAAATGAGCCACTCAGACTCGAAGGACTTCGAATTCTCCGCACCCATCAACCCCCTTGACCAACCGCCCATGGCCGCCGCCGACAAGCTCTTCTTCAACGGAAAATTGCTGCCCACTCTCCGGGACGAGCTTCTCCTCGGCGACGATGACGACATGTCGCCCAAAGCCTCCCCCCCCAAATGGAAGCATTTTTTTGGCCTTAAGAGATCGGTCGATGGGCGCTGCACTGCCGCTACTAGTCAAGGCAAAATCCCCAAATTAGCACTCGACGATAACCCCCAAATTCCCACTTCCCGATCTTTTGGAATCGAGAGACAGAGAAAAAAAAAAAAGAGAATGAACACAAAAAGAGGAAAGTATTAA MGYLETYTKGQYPPMSPRLSFSKDFVQTHNPTTHHPKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDDDDMSPKASPPKWKHFFGLKRSVDGRCTAATSQGKIPKLALDDNPQIPTSRSFGIERQRKKKKRMNTKRGKY Homology
BLAST of Sed0019145 vs. NCBI nr
Match: XP_038882319.1 (uncharacterized protein LOC120073563 [Benincasa hispida]) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27 Identity = 83/152 (54.61%), Postives = 93/152 (61.18%), Query Frame = 0
BLAST of Sed0019145 vs. NCBI nr
Match: KAG7034345.1 (hypothetical protein SDJN02_04072, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27 Identity = 83/151 (54.97%), Postives = 93/151 (61.59%), Query Frame = 0
BLAST of Sed0019145 vs. NCBI nr
Match: TYK12894.1 (uncharacterized protein E5676_scaffold255G004880 [Cucumis melo var. makuwa]) HSP 1 Score: 133.7 bits (335), Expect = 1.4e-27 Identity = 84/154 (54.55%), Postives = 98/154 (63.64%), Query Frame = 0
BLAST of Sed0019145 vs. NCBI nr
Match: XP_023544728.1 (uncharacterized protein LOC111804229 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 132.9 bits (333), Expect = 2.4e-27 Identity = 85/156 (54.49%), Postives = 95/156 (60.90%), Query Frame = 0
BLAST of Sed0019145 vs. NCBI nr
Match: XP_008441107.1 (PREDICTED: uncharacterized protein LOC103485334 [Cucumis melo]) HSP 1 Score: 131.0 bits (328), Expect = 9.2e-27 Identity = 83/154 (53.90%), Postives = 97/154 (62.99%), Query Frame = 0
BLAST of Sed0019145 vs. ExPASy TrEMBL
Match: A0A5D3CPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004880 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 6.9e-28 Identity = 84/154 (54.55%), Postives = 98/154 (63.64%), Query Frame = 0
BLAST of Sed0019145 vs. ExPASy TrEMBL
Match: A0A1S3B2N0 (uncharacterized protein LOC103485334 OS=Cucumis melo OX=3656 GN=LOC103485334 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.5e-27 Identity = 83/154 (53.90%), Postives = 97/154 (62.99%), Query Frame = 0
BLAST of Sed0019145 vs. ExPASy TrEMBL
Match: A0A6J1IL61 (uncharacterized protein LOC111478032 OS=Cucurbita maxima OX=3661 GN=LOC111478032 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 9.9e-27 Identity = 81/155 (52.26%), Postives = 92/155 (59.35%), Query Frame = 0
BLAST of Sed0019145 vs. ExPASy TrEMBL
Match: A0A0A0KIB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490830 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 9.9e-27 Identity = 83/155 (53.55%), Postives = 96/155 (61.94%), Query Frame = 0
BLAST of Sed0019145 vs. ExPASy TrEMBL
Match: A0A6J1GEJ6 (uncharacterized protein LOC111453452 OS=Cucurbita moschata OX=3662 GN=LOC111453452 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 9.9e-27 Identity = 84/156 (53.85%), Postives = 93/156 (59.62%), Query Frame = 0
BLAST of Sed0019145 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 48/139 (34.53%), Postives = 67/139 (48.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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