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Sed0019131 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGAGCAGCATCAAAGCGTTTCGACTGTGCCAAAAGGCATTTCATTCTATCTTCTTCAATTTTGCGAATCGCGGCTCTTCTCTGGCGATCAATTGGCTGAAAATGTTCGGTGTTCGATTTGAGTTCTTCGGCATTTGAATCGTTCATCTGTAGAATCCGTCGCCATTGGAGTTTTGCTTTGAGTGATTTGTTCGTTTAGGTATAGCTATTTCTTTGTTTCTTCAGCTTTAGTTTTTTTGCTTTTTCATTATGATTGTGGCTCTTCTCTGGCGATCGATTGGCTGAAAATTTTCGGTGTTCGATTTGAGTTCTTCGGCATTTGAATCATTCATCTGTAGAATCCGTAGCCATTGGTGCATTGCTTTGAGTGATTTGTTCATTTAGGTATAGCTATTTCTTTGTTTCTTCAGCTTTAGTTTTTTTGCTTGATTGTGGCTCTTCTCTGGCGATCAATTGGCTAAAGTTTTCGGCGTTCGATTTGAGTTCTTCGGCATTTGAATCGTTCATCTGTACAATCCGTAGCCATTGGAGCTTTGCTTTGAGAGATTTGTTCGTTTAGGTATAGCTCTTTCTTTGTTTCTTTAGCTTTTGCTTTATCATTGTTGATTGTTTGTATGCTTGGCTTCTTTCTGAGCAAGATTTCTGGATTTATTTTTGGTATTTTTCTGGTTGCAATGTTTGAAAAATACTCAATTGCTAATCGAAGGAGGTTGGTTAAGGAAGAGATTGAATTAAGTTTCTGCCTGTGTTTGGATTTTATGAACTCTCATGATTTCGAGGTATTTGTCTGTTTGTTTAAATTTCCGGTGCTTGAATGGGTCAGAAACCTAACAAGAGAACGTTATTGTTTCATTTTCCTTCTTTTTTACTCATTTTTTAAATTTGGTCAGTTAGAATATAATCTGTATGATCTTAAAATTAGAATTGGGAGAAATTTATTATTTAGTATCTATAGTTTTAAAAATTAGAATTTAATGTTTGATAAATTCTAAAAAATAGTATATATTATTCATAATCGCAGATAAATTAAGTGCCTGCAGATAACAATGCCTTTTTTTTTTTCCTCTTAACTCACCCATGTCATTATTGAAATACAAATAGTTTGTTTTCACGTATTTAAACTGCCAACCACTACGAACATCTAAAACTAATTTTTAGGTTTTGTGACCAAGTTATAGTGTTAAAAATGACATAGATATTTTAAATTATATAGACTAAATTCGCACTTTTTTTTCAATTTATAGGATCAAATTCATAATTTCTCCAAACTCAATAATATAATTAAGTTCTCTGAATCCTGCCGACTTCTTGAGTAGAAGCAATCTCTCGTATGAAAGAGAGGATAAATGATTGTTGTTGGACTTTTGTGAACTTTAGGAGATAAATTTAGATAAGACGTGTATGTTTTTATCGGTCACAACTCGATTTAGTAAGATAGTTTTTTGGTAATGGTTATTATTTTGATTTGTCTATTTCCAATTATGTTAATGCTTCTACATAGATAACACGGGAATTGGACATAGTAAAAGTGATTCATTGGCTGTTTTTTTCTCGTACCTCTTTCTGGATTACGACAGTTTGGAAACTTGGCTAAAATTATTTTTTTTATGTAAGTGTTTGTGCAGCTTGCGTGCACCTCGTTATTCTTACATGGCATATTGTTGGATTCTACAATATTCGAATGTCAAAAAAATTTCTAGTAAATTAATTTACAAGCAGGTAGCCACCATAAATTGAACCCACAACCTTTTGTGCTACTAGTCGTGTCTTTAATGATAAAAAGCTGTTCATAGACTACAACTCATTTAGCGTTTTTATGGAGTCATGATCTTCATCCTTTTTGTGATTATCCCTTCTATCAGACTTGCTTATTGTAACTATGTTTTGATAAGGCATTTTTGTAATTCTTCGTTCATCAATCAAAGCTATTGTTTCCGTAGAGAAAATAGTAATCTATCCTACATTACAACACGATGGACTTTTCTCGTTTGTTATGATTGCAGCAGTATTCTTTATTTTTATCTTTATTTTTTTGTTGTTTCGAACCGTAATTGAGCTATTTTATCCTTAACAGGAAAAATCTGCTCCAATTCACATCTCTGGCCATAGAATTTACATGTAGTTAGCCAGTATTTCTTTGGAGGGACTTGGTATTACCATATTCGTTAGTAAAGAAAATTGAAACCACACATGTCTGTGGCATTTCCCCAACTCTCATGGTGGTTATGGAGTGGGAAGCATAAGGAAGCTCGAACCTCCAATGGGTCTGCTTTAAATGCTTCCTTAGATACAGCCATTCGGGAACCAGATACTCTAAAATTTCCCTTAGTTAATGGTGCCAACATACCATCCTCGTCTAGAAGAGTGAAGCGAAAATGGCATAGTCGAGAAGAGAGGAAAGTTGATAGAGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGCGTTTCAGGGTCCGAATCTGATGATTCAGACTGGTCAATTGGATGGTGCGAACCACATGGACCTGGATTCCAGAGTGACGATGATACCGACAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGATGAAACTAAGAACAGTATCCTAAGTGCTGTTGGGAATATCAATGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTTTCAAGATAGTGTTTTGATTGGTATTGGGTGTTAGTTATTGCTTTGGCCTTTCATAATATTCTTCTAGTCCTCTTTTGTGAATAGTTAACTCAATAACTTCGTTCATATCCTATGATAGCTTAGTTTCTTATTTAGAATCGATTTATGCACTCTTCAACTATTTGTATGAGACAGATTGTCTGACCTTCCAATATTTGGCTATCTAGTAAACTTGTAGGAAATTAATTCCTAAATTGGATTAGCTCTCAAATCTCTAAGACCCTCTTTAACTACTAGACCAATTCATAATGGTTGAGTCGAGTTACCGGTATTCGGAAGAATGAAAATTCTAAATCTTTGATGTAGTTTAGGTAGATGATGCTATTTCCTTTTCTGATTCATGCTCGTAGTCGTAGGAAGGAATTGTAAAACTTACGAGAATTATATTCTATTATTTTGAGCCTTTACGGCCAATTTACAGAATTGAAAAGAAATCTTCCTTGTTCTTATTGATTTTATACTGGCTTCATATTGTATGATTGGCCTGTCTCAAAGGGTGACTTCATTGATAGAAGACTCAAGTTCGAAACTTATAAATGAGCTTAATTATAAAATTTATTGTTGTGTTCCAAGTTTAGACCTTTGGGACGTGTGCGTGTGCACTCGGATCTGTATGAGGCAAAGCTTTGATTCTTTGGTTATCAAAAGAAATATTGTATGATTGTTCTTCTTGCGAATGGGAATAAATTAAAAACTACATGTGAAATTTATTTTTTGGTAGCTTTTTGTTCGTTTGAAGCTGATTGTCTGCACTTTTTCATGGATCAGAGAGCAAGAAATATATGGAACAATGGCTGTCCTCTCTTCAGAGTTGCTAAAGCACAGGATTTATAGTTGCATGCATAGCTCATGCTCTGTTTCCAAGAAGAAGACATTTTGTGATATCTATCCATTTAAAAAAAAAATTTAAAAAGAAAAAAGGAAAAAGATTATAGAAGAGTATCTATTCTGGCTTCATTTGATATAAAACTAAGAAGCTAATTGGATGAAAAGAATGGATCCAAGCAGGGTTTAAGAAGAGAGACTTAAACAATGACCTCATCTGAGATGAAGCCTGTTAAAATGGCATGTAAATATGGAAGGGAGAAAGGTGGAAAAACCTTATTGTCTCCAAGGTCTGGCACTTGAAACGGGCACCGGTGCCTCCAAATATATAGTGGGGTGAAACTCTGATTCCTGGCTATCCAAACAAAGATGTACATACTTTGAGTTACTTTATAAATATGGATGGGAGAAAGGTGGAAAAAGTTGGTTGTCTCTCAAGTCTTAGTCTTAGGACGGTGCGAGTGCCCGGGTACATAGTGAGACAGATTTCTTTACAAATATGGAAAGAAGAAAGGAGGAAAAGCTTGAGCAAACTAGCTGGGTTTTGAAGAAAAAGAGTTGATGGAAGTGCATGTGCCTTGTAATTTTTTGAAGTGTTCAGTTCGTGTAAAAAGTGGCGAGCGTTAAATTCTCCTGATGTTGCTGTAAATAGCGACTTGATTGTTCGAGTCATGTAAATATGATCTGAGTGGGTTTGGTTCATCTCTATAAATGGTGACTCATTTGTAAAATTTGTTGTACAAAGTAACACAGTTGTGCAGGCTTGTAAATGTCTCTCCCTGTTCAATGTAATATTCTTTATATATAAGCATTAAAGCCTATGTATTACTAATAGTTTCTATTCTTTTTCTTCTTTTTTTCGGAGAAAATGTATCACTATTAGTTGTTTGTAATGTGAAAGATAAGTTTGTTATTA CTGGAGCAGCATCAAAGCGTTTCGACTGTGCCAAAAGGCATTTCATTCTATCTTCTTCAATTTTGCGAATCGCGGCTCTTCTCTGGCGATCAATTGGCTGAAAATGTTCGGTGTTCGATTTGAGTTCTTCGGCATTTGAATCGTTCATCTGTAGAATCCGTCGCCATTGGAGTTTTGCTTTGAGTGATTTGTTCGTTTAGGTATAGCTATTTCTTTGTTTCTTCAGCTTTAGTTTTTTTGCTTTTTCATTATGATTGTGGCTCTTCTCTGGCGATCGATTGGCTGAAAATTTTCGGTGTTCGATTTGAGTTCTTCGGCATTTGAATCATTCATCTGTAGAATCCGTAGCCATTGGTGCATTGCTTTGAGTGATTTGTTCATTTAGGTATAGCTATTTCTTTGTTTCTTCAGCTTTAGTTTTTTTGCTTGATTGTGGCTCTTCTCTGGCGATCAATTGGCTAAAGTTTTCGGCGTTCGATTTGAGTTCTTCGGCATTTGAATCGTTCATCTGTACAATCCGTAGCCATTGGAGCTTTGCTTTGAGAGATTTGTTCGTTTAGGAAAAATCTGCTCCAATTCACATCTCTGGCCATAGAATTTACATGTAGTTAGCCAGTATTTCTTTGGAGGGACTTGGTATTACCATATTCGTTAGTAAAGAAAATTGAAACCACACATGTCTGTGGCATTTCCCCAACTCTCATGGTGGTTATGGAGTGGGAAGCATAAGGAAGCTCGAACCTCCAATGGGTCTGCTTTAAATGCTTCCTTAGATACAGCCATTCGGGAACCAGATACTCTAAAATTTCCCTTAGTTAATGGTGCCAACATACCATCCTCGTCTAGAAGAGTGAAGCGAAAATGGCATAGTCGAGAAGAGAGGAAAGTTGATAGAGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGCGTTTCAGGGTCCGAATCTGATGATTCAGACTGGTCAATTGGATGGTGCGAACCACATGGACCTGGATTCCAGAGTGACGATGATACCGACAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGATGAAACTAAGAACAGTATCCTAAGTGCTGTTGGGAATATCAATGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTTTCAAGATAGTGTTTTGATTGGTATTGGGTGTTAGTTATTGCTTTGGCCTTTCATAATATTCTTCTAGTCCTCTTTTGTGAATAGTTAACTCAATAACTTCGTTCATATCCTATGATAGCTTAGTTTCTTATTTAGAATCGATTTATGCACTCTTCAACTATTTGTATGAGACAGATTGTCTGACCTTCCAATATTTGGCTATCTAGTAAACTTGTAGGAAATTAATTCCTAAATTGGATTAGCTCTCAAATCTCTAAGACCCTCTTTAACTACTAGACCAATTCATAATGGTTGAGTCGAGTTACCGGTATTCGGAAGAATGAAAATTCTAAATCTTTGATGTAGTTTAGGTAGATGATGCTATTTCCTTTTCTGATTCATGCTCGTAGTCGTAGGAAGGAATTGTAAAACTTACGAGAATTATATTCTATTATTTTGAGCCTTTACGGCCAATTTACAGAATTGAAAAGAAATCTTCCTTGTTCTTATTGATTTTATACTGGCTTCATATTGTATGATTGGCCTGTCTCAAAGGGTGACTTCATTGATAGAAGACTCAAGTTCGAAACTTATAAATGAGCTTAATTATAAAATTTATTGTTGTGTTCCAAGTTTAGACCTTTGGGACGTGTGCGTGTGCACTCGGATCTGTATGAGGCAAAGCTTTGATTCTTTGGTTATCAAAAGAAATATTGTATGATTGTTCTTCTTGCGAATGGGAATAAATTAAAAACTACATGTGAAATTTATTTTTTGGTAGCTTTTTGTTCGTTTGAAGCTGATTGTCTGCACTTTTTCATGGATCAGAGAGCAAGAAATATATGGAACAATGGCTGTCCTCTCTTCAGAGTTGCTAAAGCACAGGATTTATAGTTGCATGCATAGCTCATGCTCTGTTTCCAAGAAGAAGACATTTTGTGATATCTATCCATTTAAAAAAAAAATTTAAAAAGAAAAAAGGAAAAAGATTATAGAAGAGTATCTATTCTGGCTTCATTTGATATAAAACTAAGAAGCTAATTGGATGAAAAGAATGGATCCAAGCAGGGTTTAAGAAGAGAGACTTAAACAATGACCTCATCTGAGATGAAGCCTGTTAAAATGGCATGTAAATATGGAAGGGAGAAAGGTGGAAAAACCTTATTGTCTCCAAGGTCTGGCACTTGAAACGGGCACCGGTGCCTCCAAATATATAGTGGGGTGAAACTCTGATTCCTGGCTATCCAAACAAAGATGTACATACTTTGAGTTACTTTATAAATATGGATGGGAGAAAGGTGGAAAAAGTTGGTTGTCTCTCAAGTCTTAGTCTTAGGACGGTGCGAGTGCCCGGGTACATAGTGAGACAGATTTCTTTACAAATATGGAAAGAAGAAAGGAGGAAAAGCTTGAGCAAACTAGCTGGGTTTTGAAGAAAAAGAGTTGATGGAAGTGCATGTGCCTTGTAATTTTTTGAAGTGTTCAGTTCGTGTAAAAAGTGGCGAGCGTTAAATTCTCCTGATGTTGCTGTAAATAGCGACTTGATTGTTCGAGTCATGTAAATATGATCTGAGTGGGTTTGGTTCATCTCTATAAATGGTGACTCATTTGTAAAATTTGTTGTACAAAGTAACACAGTTGTGCAGGCTTGTAAATGTCTCTCCCTGTTCAATGTAATATTCTTTATATATAAGCATTAAAGCCTATGTATTACTAATAGTTTCTATTCTTTTTCTTCTTTTTTTCGGAGAAAATGTATCACTATTAGTTGTTTGTAATGTGAAAGATAAGTTTGTTATTA ATGTCTGTGGCATTTCCCCAACTCTCATGGTGGTTATGGAGTGGGAAGCATAAGGAAGCTCGAACCTCCAATGGGTCTGCTTTAAATGCTTCCTTAGATACAGCCATTCGGGAACCAGATACTCTAAAATTTCCCTTAGTTAATGGTGCCAACATACCATCCTCGTCTAGAAGAGTGAAGCGAAAATGGCATAGTCGAGAAGAGAGGAAAGTTGATAGAGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGCGTTTCAGGGTCCGAATCTGATGATTCAGACTGGTCAATTGGATGGTGCGAACCACATGGACCTGGATTCCAGAGTGACGATGATACCGACAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGATGAAACTAAGAACAGTATCCTAAGTGCTGTTGGGAATATCAATGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTTTCAAGATAG MSVAFPQLSWWLWSGKHKEARTSNGSALNASLDTAIREPDTLKFPLVNGANIPSSSRRVKRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWCEPHGPGFQSDDDTDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAGKSCFFSR Homology
BLAST of Sed0019131 vs. NCBI nr
Match: KAG7020253.1 (hypothetical protein SDJN02_16936, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82 Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0
BLAST of Sed0019131 vs. NCBI nr
Match: KAA0065096.1 (Ribosomal RNA small subunit methyltransferase A [Cucumis melo var. makuwa]) HSP 1 Score: 314.7 bits (805), Expect = 4.7e-82 Identity = 153/162 (94.44%), Postives = 156/162 (96.30%), Query Frame = 0
BLAST of Sed0019131 vs. NCBI nr
Match: XP_023001877.1 (uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001878.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001879.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001880.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023536720.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536721.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536722.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78 Identity = 142/154 (92.21%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Sed0019131 vs. NCBI nr
Match: XP_022951746.1 (uncharacterized protein LOC111454487 [Cucurbita moschata] >XP_022951747.1 uncharacterized protein LOC111454487 [Cucurbita moschata]) HSP 1 Score: 302.0 bits (772), Expect = 3.1e-78 Identity = 142/154 (92.21%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Sed0019131 vs. NCBI nr
Match: XP_022132228.1 (uncharacterized protein LOC111005141 isoform X1 [Momordica charantia] >XP_022132229.1 uncharacterized protein LOC111005141 isoform X1 [Momordica charantia] >XP_022132230.1 uncharacterized protein LOC111005141 isoform X1 [Momordica charantia] >XP_022132231.1 uncharacterized protein LOC111005141 isoform X1 [Momordica charantia] >XP_022132232.1 uncharacterized protein LOC111005141 isoform X1 [Momordica charantia]) HSP 1 Score: 301.2 bits (770), Expect = 5.3e-78 Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0
BLAST of Sed0019131 vs. ExPASy TrEMBL
Match: A0A5A7VFJ3 (Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004290 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 2.3e-82 Identity = 153/162 (94.44%), Postives = 156/162 (96.30%), Query Frame = 0
BLAST of Sed0019131 vs. ExPASy TrEMBL
Match: A0A6J1KME1 (uncharacterized protein LOC111495931 OS=Cucurbita maxima OX=3661 GN=LOC111495931 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 8.9e-79 Identity = 142/154 (92.21%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Sed0019131 vs. ExPASy TrEMBL
Match: A0A6J1GID2 (uncharacterized protein LOC111454487 OS=Cucurbita moschata OX=3662 GN=LOC111454487 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78 Identity = 142/154 (92.21%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Sed0019131 vs. ExPASy TrEMBL
Match: A0A6J1BRV5 (uncharacterized protein LOC111005141 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005141 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.6e-78 Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0
BLAST of Sed0019131 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 9.8e-78 Identity = 145/155 (93.55%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of Sed0019131 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14 Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of Sed0019131 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 0
BLAST of Sed0019131 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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