Sed0019052 (gene) Chayote v1

Overview
NameSed0019052
Typegene
OrganismSechium edule (Chayote v1)
DescriptionMitochondrial import inner membrane translocase subunit
LocationLG01: 66823486 .. 66827202 (+)
RNA-Seq ExpressionSed0019052
SyntenySed0019052
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCGTTTTCATCGCCTTCGAGCAATTCCTCTTCCCAGTTTTCGGCATCTGAATTGAGGGATCAGCTCAAGACTCAGCTCGCCCAGGCCTACGCCGAGGAGTTTCTCGAGGTTCATTTCTCCCTTCTCTTTTCTCCTGTTCCAATCACCCATTTCTATGCATTCCTCAACTTCCTAGTATTGTGTGTTGTGTGATAGTTGACACACATCAAAAACAAACGAATTTGTAATTTCTCGTTTTGAAGATGGATGTAACAAATAATCAATGCATTCGAAAACAAAAAGAAAAGGATATAATCAATGCGAATTCTTCACTTGCTATACATTTCTTAGTTTACATTCTCATTTATTACTTCTTGTTCGTACTTTGTACCCAAGGGGTGGCACATTGGTCGAAGACTTCAGCTTTAAGAGTATGCTCCCAGGTTCTTACATTACTCCTTCGATGTCTTCCGGAGCCTGGCCTAGGGACGGGCGCGGTTATCCTTGTTTCAAAAAGATCTTGTTCGTACTTTTTTTTTTGCCTTATATCCTTATATTTTGTTGTTATTGATTGAACGTGTAGAAATTTGAAATCTATTGAGGAAGTCCTTTAGGGGATATGTTTTGGGGAAGGGGAATGGTAATGATTGTGTGGAATGAGAATTAGAGTGAAAATGTGAAGGAGATTGTTTGTATTTGGGGTGAAGCCGTGAAGAGAGTGATTAGTTGTGTTTGGGGTGAAAGGAATGATTGTGAGGAAATTTAAATAGTGAGTATGATGAGAGTGAAAAATAGTTATGGGGAGAATAGAAAGTTGTTATCGGAAGAATTGATATTAGTTAGGAGCAGAATAAAATGGTGATTTTTGGGAAATGTGATTATGAGGAGAATGATTCTCGATCGCCCAAACACCGGGAATTAGAGAATTATCCATTTGGCATAAACACCCCGTGAAGAGAGTGATTATGAGGTGAAGGGAATGAACACACAAGGGCAACATTCTCGATCGCCGTGAAGAGAGTGATTAATTGTGTTTGGGGTGAAGAGAATGGTTACGAGGAGAAATGTGATTATGGTCCCATCCATTTGACATAAACACCCCCTAAATTCTTATATTCTATTATTATGGAGAAATGTGATCAGTGGTTTTAGTGCAATTGAAAATCAAATACTTTTTTGTTTCAAGTCCTCGAGTAGCTTGTAGTTTTGGTATATAACTAGTTTTGTAGCATTTTTTGACAGATTTATTTTTTCATCCGTTGATTTTGATGGGAGAATGGGAGGGGCTAGTATTTGTAGATTTGTAGGAGGAACAAACTTTCTGAAAGTAATTTCTTGAACGCTTTACATGGAATTAGTATTGGTGTGTGGTAGAGGACTCGTTCTTTTAATTTAATGACTATAATTTTCATATAGATTAGTACAGAGAATTATTTAGTGGACCAAAAAGTTCTATGTATTGTGAAGAGGTTTTGAGCAATAGTTGAAAGAAGAATATAATTGTTCCAACTGAGGTTGACACGAAGGGCTAGTAAAATGGGACTTTCTGGTTCGGAGTTTCTTGAACATGAAACACATGGGGAAGTGTTTGTGCTGATGGAAATGAAAGATTAGAAATTATTTGTAGAGATTCTGACAGACTTTGGCCACTGCCAGTCTCCTGAACTTATTTCTAGTGGTTGAACTTAGAATCTTGTTTGCGCTAATAGAAAAGTGACCACATGACTTGTGAAAACGAGAACCATGTCTCTCTCTTTCAATGTTTTAAAAAGCTATTGAAGCTTACGCCCTGTGATAGCCTCAAGACTTACAACTCACGTAGGAGAGGCTTACGTCTCTATGATAATGCATTGAGGTTTAAAGTCTCTAGCCTCAAGAGTATGAACAATAATAATATGATTTATTACTACTTTTATTACTCTTGCTTAAAAATACTAACAAAAATTTACAGAATATAAGATCTAAAAATTTCTCTTTTGGATCCTTCTTGTTAGAAAGGCACATAATTACTTTAAGACCGTTAATTTAATTTTGATAATTTGTTGGCTAGTTGCACATCCTTTTGGTTTTCTTTGTTGCAATTTGAAGAGTCTCTTGGATGTCTGTGTTCTTCTCTCTCTTTTACGTTTTTTTTTATGTATTTTCAATTAATTATTGATTGCCGTTTTCATAACACATCAATCTTTGAAAAATTTTAAGTGATAATTGTCGGTGTTATGTTTTATGTATTTTTACCTAAGTATTATGTTTTACCGTACACGTTTACACAAATTTAGAATTTTTATAATGTTTTTAATTTAAATTGATGCCTCAAACTGCCCCAAGGCTGCCTTTAGCCTCTTAAAATTCTGTTCTTCTCTTTCATGCTTTCTTCCCCGCGCCTGCAGCCACGAACCATGACTCTTTTGAACTAACTGACCCACAGTCACCATGTAGTTTCGTTGAGCGAAAGACTTTCTTTTTATCTCAAGTTAACAAAACACCAAAGCTAATGCACCTCATTGACGCCTCCATCGATGTAGCTTTTCGGTCGCCTTTGCTAGTGAGATTTTATTCTGGCTCCATGAGTGCATTACCCATTTATGTGATCTTCTGCTAACATAGAAGCTCGTGCGAGCCATCATTATTTCATAGATGGGAAGATTAGTTCTTTCTAATTTTCTTAACCTGCATAAAATTTTCTGTGTGTTCAACTCAGGGAAGATAAGGAAAAGAAAAGGACAGCTCTAGAATAATAATGTGTAATGCTATGATTCTGTGACTAGATAATCTAAGCTACAACTACAATGGAAGATTGAGACCATCTCATCATCTTTTTTTGTTGTGAATTTTAGATTTCCATTTATGTGGATATAAATAAATAGTTTGATCTATGTGATAATCTCAGGGGGCTGTTTGGATGAGTTGGGGCGTAGTTCGTTTAGATGTAGTTGTTTGTTGATGATTTGTAATAATAGCTTGGATGTGGTTGTTTGTACAATTTTCATTGCTTCGAGTTTCTTTTTCGGATTGTCATGGGTTATTATGGAGCATATTTATGTGTCTGTTGCATTCTGTTAACCTTGTGCTGCGCTTTGCAATATCAAACTTGGTACTAGTTTTGTATCTTGATATACAAAGATCTAAAGGCCAGTCTCAATTGTTTTTAGTTTTTTGTTTATGAAATTTAAGTCTATTTCTATTCAAATTTCCTACCATGTGCTCCATCTTTCCTACAATATATCTATCTTTCCTTAAGTAAGTAGGAGAATACTAACCAAATTTCAAAAACATAAACAAATTTTTGGAAGCTACTTTTTTTTGTTTACAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGATGTAGATATTCAAATAAGAAAAAAGGTATAGTAAGGTAGTTGTTGTAAGTTTAAATTTCATAAATAAAAAACGAAAAACAAAATGGTTATCAAATGGGACTTAAGTTTTTTTTTTTTTTTTTTTTCTTTTTCCCCTTGTAGTAGCATCATCGTGTTTGATAATAACCGTGATTAATCAAATGAAATGAAAAGGTAGACTTTTCAACAATTTTGAGTGGCTAATTTTGCTTTTTTTGCAGACCGTAAGAGAGAAGTGCTTTGAGAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGAGAGCAGTTGCACCTCCAGGTGCATGGAGCGCTATATTGAGGCCACCAACATCATCAGTAGAGCCATGTTTAATGCACCACACTGA

mRNA sequence

ATGGATTCGTTTTCATCGCCTTCGAGCAATTCCTCTTCCCAGTTTTCGGCATCTGAATTGAGGGATCAGCTCAAGACTCAGCTCGCCCAGGCCTACGCCGAGGAGTTTCTCGAGACCGTAAGAGAGAAGTGCTTTGAGAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGAGAGCAGTTGCACCTCCAGGTGCATGGAGCGCTATATTGAGGCCACCAACATCATCAGTAGAGCCATGTTTAATGCACCACACTGA

Coding sequence (CDS)

ATGGATTCGTTTTCATCGCCTTCGAGCAATTCCTCTTCCCAGTTTTCGGCATCTGAATTGAGGGATCAGCTCAAGACTCAGCTCGCCCAGGCCTACGCCGAGGAGTTTCTCGAGACCGTAAGAGAGAAGTGCTTTGAGAAGTGCATCACAAAGCCAGGGTCAAGCCTAAGTGGGAGTGAGAGCAGTTGCACCTCCAGGTGCATGGAGCGCTATATTGAGGCCACCAACATCATCAGTAGAGCCATGTTTAATGCACCACACTGA

Protein sequence

MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSESSCTSRCMERYIEATNIISRAMFNAPH
Homology
[Close]
BLAST of Sed0019052 vs. NCBI nr
Match: XP_038906948.1 (mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida])

HSP 1 Score: 147.1 bits (370), Expect = 6.9e-32
Identity = 75/87 (86.21%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SSSQFSA+E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT+I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. NCBI nr
Match: XP_004145880.1 (mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus] >XP_008437464.1 PREDICTED: mitochondrial import inner membrane translocase subunit Tim13 [Cucumis melo] >KGN49963.1 hypothetical protein Csa_000141 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SS QFSA+E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT+I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. NCBI nr
Match: XP_022929052.1 (mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata] >XP_022970119.1 mitochondrial import inner membrane translocase subunit TIM13 [Cucurbita maxima] >KAG6579600.1 Mitochondrial import inner membrane translocase subunit TIM13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.8 bits (364), Expect = 3.4e-31
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SSSQFS +E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. NCBI nr
Match: XP_023520535.1 (mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 7.6e-31
Identity = 74/87 (85.06%), Postives = 78/87 (89.66%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SSSQFS +E RDQLKTQLAQAYAEEFLET+R KCF KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFAKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. NCBI nr
Match: XP_022159838.1 (mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia])

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-30
Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS  SSQFSA E +DQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGPSSQFSAHEFKDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT+I+S+A+F  PH
Sbjct: 61 SSCISRCMERYIEATSIVSKALFKTPH 87

[Close]
BLAST of Sed0019052 vs. ExPASy Swiss-Prot
Match: Q9XGY5 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM13 PE=3 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-23
Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSF   SS+S S  +   L DQ+K QLAQAYA+EFLETV  KCF KC+TKPGSSLSGSE
Sbjct: 1  MDSF---SSSSGSPPNTEALMDQIKAQLAQAYAQEFLETVGNKCFAKCVTKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNA 86
          SSC SRC++RYIEAT I+SRA+F++
Sbjct: 61 SSCISRCVDRYIEATGIVSRALFSS 82

[Close]
BLAST of Sed0019052 vs. ExPASy Swiss-Prot
Match: Q9XH48 (Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis thaliana OX=3702 GN=TIM13 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-22
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0 

Query: 1  MDSFSS-PSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGS 60
          MDS+SS P   S S  S   + + +KTQLAQAYAEE +ET+R KCF+KC+TKPGSSL GS
Sbjct: 1  MDSYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGS 60

Query: 61 ESSCTSRCMERYIEATNIISRAMF 84
          ESSC SRC+ERY+EAT IISR++F
Sbjct: 61 ESSCISRCVERYMEATAIISRSLF 84

[Close]
BLAST of Sed0019052 vs. ExPASy Swiss-Prot
Match: Q8AVK1 (Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevis OX=8355 GN=timm13-b PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-12
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 0 

Query: 1  MDSFSSPSS---NSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLS 60
          MD F S  S   +SS +     + +Q+K Q+A A A+E L+ + +KCF KCI KPG SL 
Sbjct: 1  MDGFGSDFSVGGSSSGKVDTGAIMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLD 60

Query: 61 GSESSCTSRCMERYIEATNIISRA 82
           SE  C + CM+RY++A NI+SRA
Sbjct: 61 NSEQKCVAMCMDRYMDAWNIVSRA 84

[Close]
BLAST of Sed0019052 vs. ExPASy Swiss-Prot
Match: Q6DGJ3 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio OX=7955 GN=timm13 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-12
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 1  MDSFSS--PSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSG 60
          M+ F S   S +SS +     + +Q+K Q+A A A+E L+ + +KCF+KCI KPGS+L  
Sbjct: 1  MEGFGSDFSSGSSSGKMDTGTIMEQVKVQIAVANAQELLQRMTDKCFKKCIGKPGSTLDN 60

Query: 61 SESSCTSRCMERYIEATNIISRA 82
          SE  C + CM+RY++A N +SRA
Sbjct: 61 SEQKCIAMCMDRYMDAWNTVSRA 83

[Close]
BLAST of Sed0019052 vs. ExPASy Swiss-Prot
Match: Q9VTN3 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Drosophila melanogaster OX=7227 GN=Tim13 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-11
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 0 

Query: 11 SSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSESSCTSRCMER 70
          +++     EL +Q+K Q+A A A+E L  + EKCF+KCI KPG SL  +E  C S+CM+R
Sbjct: 2  AAANMEKGELMNQVKQQIALANAQEMLSKMTEKCFKKCIQKPGKSLDSTEQRCISQCMDR 61

Query: 71 YIEATNIISRAMFN 85
          +++A N++SR   N
Sbjct: 62 FMDAWNLVSRTYGN 75

[Close]
BLAST of Sed0019052 vs. ExPASy TrEMBL
Match: A0A0A0KK66 (Mitochondrial import inner membrane translocase subunit OS=Cucumis sativus OX=3659 GN=Csa_5G146860 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SS QFSA+E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT+I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. ExPASy TrEMBL
Match: A0A1S3AUN2 (Mitochondrial import inner membrane translocase subunit OS=Cucumis melo OX=3656 GN=LOC103482878 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 74/87 (85.06%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SS QFSA+E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSPQFSANEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT+I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATSIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. ExPASy TrEMBL
Match: A0A6J1I4K9 (Mitochondrial import inner membrane translocase subunit OS=Cucurbita maxima OX=3661 GN=LOC111469108 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SSSQFS +E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. ExPASy TrEMBL
Match: A0A6J1ELP2 (Mitochondrial import inner membrane translocase subunit OS=Cucurbita moschata OX=3662 GN=LOC111435758 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS SSSQFS +E RDQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT I+SRA+F  PH
Sbjct: 61 SSCISRCMERYIEATGIVSRALFKTPH 87

[Close]
BLAST of Sed0019052 vs. ExPASy TrEMBL
Match: A0A6J1DZZ6 (Mitochondrial import inner membrane translocase subunit OS=Momordica charantia OX=3673 GN=LOC111026139 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 1  MDSFSSPSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGSE 60
          MDSFSSPSS  SSQFSA E +DQLKTQLAQAYAEEFLET+R KCF+KCITKPGSSLSGSE
Sbjct: 1  MDSFSSPSSGPSSQFSAHEFKDQLKTQLAQAYAEEFLETLRVKCFDKCITKPGSSLSGSE 60

Query: 61 SSCTSRCMERYIEATNIISRAMFNAPH 88
          SSC SRCMERYIEAT+I+S+A+F  PH
Sbjct: 61 SSCISRCMERYIEATSIVSKALFKTPH 87

[Close]
BLAST of Sed0019052 vs. TAIR 10
Match: AT1G61570.1 (translocase of the inner mitochondrial membrane 13 )

HSP 1 Score: 105.1 bits (261), Expect = 2.8e-23
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0 

Query: 1  MDSFSS-PSSNSSSQFSASELRDQLKTQLAQAYAEEFLETVREKCFEKCITKPGSSLSGS 60
          MDS+SS P   S S  S   + + +KTQLAQAYAEE +ET+R KCF+KC+TKPGSSL GS
Sbjct: 1  MDSYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGS 60

Query: 61 ESSCTSRCMERYIEATNIISRAMF 84
          ESSC SRC+ERY+EAT IISR++F
Sbjct: 61 ESSCISRCVERYMEATAIISRSLF 84

[Close]
BLAST of Sed0019052 vs. TAIR 10
Match: AT5G50810.1 (translocase inner membrane subunit 8 )

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 24/63 (38.10%), Postives = 36/63 (57.14%), Query Frame = 0 

Query: 19 ELRDQLKTQLAQAYAEEFLETVREKCFEKCITK-PGSSLSGSESSCTSRCMERYIEATNI 78
          EL   L  +  +A   E +  +   C++KCIT  PGS  S SESSC + C +RY++ + I
Sbjct: 10 ELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCAQRYMDMSMI 69

Query: 79 ISR 81
          I +
Sbjct: 70 IMK 72

The following BLAST results are available for this feature:
BLAST of Sed0019052 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906948.16.9e-3286.21mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida... [more]
XP_004145880.12.6e-3185.06mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus] ... [more]
XP_022929052.13.4e-3185.06mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [C... [more]
XP_023520535.17.6e-3185.06mitochondrial import inner membrane translocase subunit Tim13 [Cucurbita pepo su... [more]
XP_022159838.12.2e-3082.76mitochondrial import inner membrane translocase subunit Tim13 [Momordica charant... [more]
BLAST of Sed0019052 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XGY52.7e-2368.24Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa su... [more]
Q9XH484.0e-2265.48Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis tha... [more]
Q8AVK12.2e-1246.43Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevi... [more]
Q6DGJ36.3e-1244.58Mitochondrial import inner membrane translocase subunit Tim13 OS=Danio rerio OX=... [more]
Q9VTN31.1e-1144.59Mitochondrial import inner membrane translocase subunit Tim13 OS=Drosophila mela... [more]
BLAST of Sed0019052 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK661.3e-3185.06Mitochondrial import inner membrane translocase subunit OS=Cucumis sativus OX=36... [more]
A0A1S3AUN21.3e-3185.06Mitochondrial import inner membrane translocase subunit OS=Cucumis melo OX=3656 ... [more]
A0A6J1I4K91.7e-3185.06Mitochondrial import inner membrane translocase subunit OS=Cucurbita maxima OX=3... [more]
A0A6J1ELP21.7e-3185.06Mitochondrial import inner membrane translocase subunit OS=Cucurbita moschata OX... [more]
A0A6J1DZZ61.1e-3082.76Mitochondrial import inner membrane translocase subunit OS=Momordica charantia O... [more]
BLAST of Sed0019052 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G61570.12.8e-2365.48translocase of the inner mitochondrial membrane 13 [more]
AT5G50810.12.0e-0538.10translocase inner membrane subunit 8 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 29..86
e-value: 4.6E-20
score: 72.9
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 34..84
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 23..82
e-value: 8.8E-21
score: 73.3
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 5..87
NoneNo IPR availablePANTHERPTHR19338:SF14OSJNBA0064M23.16 PROTEINcoord: 5..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019052.1Sed0019052.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045039 protein insertion into mitochondrial inner membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0042719 mitochondrial intermembrane space protein transporter complex
cellular_component GO:0005758 mitochondrial intermembrane space
molecular_function GO:0046872 metal ion binding