
Sed0019025 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTTCACATCCATTTCTTACCACAAAAAACAAAATTTGAAGATATGGGTTCAGGGAATTTTCTTCAAGTCGTGGCCAACAACTTCGACGTTCTTGCCCTGTAATCATTTGAGTTTCATTCCTGTTTTTCCTTCTTCTAATTTCAAGGAATAATGATTTAATTTTGGTTTTCCAATTTTGTATGCAGGCCAGTGGTGTCTTTGGTGTACCCTCTGTAAGAGAAAAGAGAGATTGAAATAATTAAGTGTACATACTTGCATTTTTAGTTTCATTTTTGGTGAATATAATGAGGTGTTTGGAAATAGGTATGCTTCAATCAAGGCTATAGAGACGAGGTCGATTGTGGATGACCAGCAATGGCTCACTTACTGGGTTCTCTACTCTCTCATCACTCTTTTTGAGCTTACATTTGCCAAACTACTCGAAGTGTAAGTCTGTCGTTGTGTTCGTACACACTTACTTCTTTGTTCTCACCTTTGTTTATGTTACAGGTTGTTTGCTAACCGTAAAGTGAAAATGAATTAACAACAAAACAGATAATTAATTACACGATCCATCCATTCACCAATCGTTGTCTATTCATGAATTAGCCACAACTTATTTTTTAATGTACTTTTGTTTATAAATTTTGTGGCATGGTGGCACAAACCTTTTTCTTTTAAGTACAATTTTTCTACTCATTTGTGAATGAACAAAGTATTATTATTCTTTTTTTTAAGTTAAGGTTTAAGAAAGAATTTAATTGTACTAAAAAAAAGAGTTTAATTAATATTTTTTAGTCATTGAGTTTAATTAATATATATATAACTATACATTATTATCTATTTTTTTAATGGAAAATGGCATTTTACATGGACAAGCCTTAGATTCAATATTTTTTATAATTTAACTTCTCACTAATTATATTATTTTTCTGGCTGTTTATGTTAATTTCTAAAAAAACATATCAAAAAGTACTAATTAAAATGTGTTGTTAAACAAAAAAATTAAGGTCTCCTTTGATAACCATTTTGTTTTTCGTTTTTTGTTTATGAAATTTAAGCCTATAGCAACTACTTTATTATACTTTTTTCCTTATTTGGATATCTACATCTTACCTATATTTTAATCAACAAAACCAAAATTTAGAAACAAAAAAAAGTAAGCCTCAAAAGTTTGTTTTTGTTTTTGGAATTTGATTAGTATTCACCTATTTTCTTAAGGAAATATGGATACATTGTAGGAAAGAATGAGCACATGGTAGTAAATTTAAGTAGAAATAAACTTCAATTTCATAAACGAAAACCAAATGGTTATCAAACGGGGCCTAAAGTTTGTGTTTTCTTCGTGAATATTTTGTTTCAGGGTTGCAGTTTGGCCATACGTGAAGCTGATAATAATGAGTTGGTTGGTGCTGCCACACTTCAATGGCGCAGCACACGTTTACAAGAACTTCATTAGGCCACACTATACAAACCCACAATCTTCTACATTATGGTACATCCCTCGAAAAACCAAAGAGATTTTCAGTACCCCAGATGATGTTTTAACTGCCGCTGAGAGGTACATGGAAGAACATGGAACTCAAGCTTTCGAAAGGCTTATGCTCAAGGTTTGTATATGTGAATACCTATATATTGATTTGCATTACTTAAATTAACTCTCAAGTTTGATCTTGATATGTGATTACTTGTCAAATTTAGCAGGCGGACCGGGAGAGATCGAGGAGGAGTAACAATTACATGATTTTCGATGATGATTATGCATATTGAAGTTTGTCTACTTAATTATGTCTACTTTGTTTAATTTGGTTGTAGTATCTAGAGAGTTCAACTGAGACTTGTATGAACTAGCCTATATTTACTATGTTGTATTAGCTAGTGTTGTCTAGAGAATGGTTAGCTTTGCCTAAGTGGAATAATGTTCTCAAAATCAACTTCCACCGTCACAGGTTCGATCCTGAAAATCAGTATTTACCTCTCATATTATTTGAGAGTAGCAGTACCATCTGTGTAAGGTTTGTTGTCCTTTTATTTTCCTTTAATTAATTATCTGAAAATTTGTTTGGTCTT CTCTTTCACATCCATTTCTTACCACAAAAAACAAAATTTGAAGATATGGGTTCAGGGAATTTTCTTCAAGTCGTGGCCAACAACTTCGACGTTCTTGCCCTGCCAGTGGTGTCTTTGGTGTACCCTCTGTATGCTTCAATCAAGGCTATAGAGACGAGGTCGATTGTGGATGACCAGCAATGGCTCACTTACTGGGTTCTCTACTCTCTCATCACTCTTTTTGAGCTTACATTTGCCAAACTACTCGAAGTGGTTGCAGTTTGGCCATACGTGAAGCTGATAATAATGAGTTGGTTGGTGCTGCCACACTTCAATGGCGCAGCACACGTTTACAAGAACTTCATTAGGCCACACTATACAAACCCACAATCTTCTACATTATGGTACATCCCTCGAAAAACCAAAGAGATTTTCAGTACCCCAGATGATGTTTTAACTGCCGCTGAGAGGTACATGGAAGAACATGGAACTCAAGCTTTCGAAAGGCTTATGCTCAAGCAGGCGGACCGGGAGAGATCGAGGAGGAGTAACAATTACATGATTTTCGATGATGATTATGCATATTGAAGTTTGTCTACTTAATTATGTCTACTTTGTTTAATTTGGTTGTAGTATCTAGAGAGTTCAACTGAGACTTGTATGAACTAGCCTATATTTACTATGTTGTATTAGCTAGTGTTGTCTAGAGAATGGTTAGCTTTGCCTAAGTGGAATAATGTTCTCAAAATCAACTTCCACCGTCACAGGTTCGATCCTGAAAATCAGTATTTACCTCTCATATTATTTGAGAGTAGCAGTACCATCTGTGTAAGGTTTGTTGTCCTTTTATTTTCCTTTAATTAATTATCTGAAAATTTGTTTGGTCTT ATGGGTTCAGGGAATTTTCTTCAAGTCGTGGCCAACAACTTCGACGTTCTTGCCCTGCCAGTGGTGTCTTTGGTGTACCCTCTGTATGCTTCAATCAAGGCTATAGAGACGAGGTCGATTGTGGATGACCAGCAATGGCTCACTTACTGGGTTCTCTACTCTCTCATCACTCTTTTTGAGCTTACATTTGCCAAACTACTCGAAGTGGTTGCAGTTTGGCCATACGTGAAGCTGATAATAATGAGTTGGTTGGTGCTGCCACACTTCAATGGCGCAGCACACGTTTACAAGAACTTCATTAGGCCACACTATACAAACCCACAATCTTCTACATTATGGTACATCCCTCGAAAAACCAAAGAGATTTTCAGTACCCCAGATGATGTTTTAACTGCCGCTGAGAGGTACATGGAAGAACATGGAACTCAAGCTTTCGAAAGGCTTATGCTCAAGCAGGCGGACCGGGAGAGATCGAGGAGGAGTAACAATTACATGATTTTCGATGATGATTATGCATATTGA MGSGNFLQVVANNFDVLALPVVSLVYPLYASIKAIETRSIVDDQQWLTYWVLYSLITLFELTFAKLLEVVAVWPYVKLIIMSWLVLPHFNGAAHVYKNFIRPHYTNPQSSTLWYIPRKTKEIFSTPDDVLTAAERYMEEHGTQAFERLMLKQADRERSRRSNNYMIFDDDYAY Homology
BLAST of Sed0019025 vs. NCBI nr
Match: XP_038893172.1 (HVA22-like protein c isoform X1 [Benincasa hispida]) HSP 1 Score: 331.3 bits (848), Expect = 5.1e-87 Identity = 161/173 (93.06%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Sed0019025 vs. NCBI nr
Match: XP_038893173.1 (HVA22-like protein c isoform X2 [Benincasa hispida]) HSP 1 Score: 325.1 bits (832), Expect = 3.7e-85 Identity = 160/173 (92.49%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Sed0019025 vs. NCBI nr
Match: XP_008446335.1 (PREDICTED: HVA22-like protein c isoform X1 [Cucumis melo]) HSP 1 Score: 323.9 bits (829), Expect = 8.2e-85 Identity = 158/173 (91.33%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of Sed0019025 vs. NCBI nr
Match: XP_004135181.1 (HVA22-like protein c isoform X1 [Cucumis sativus] >KGN51905.1 hypothetical protein Csa_008962 [Cucumis sativus]) HSP 1 Score: 322.0 bits (824), Expect = 3.1e-84 Identity = 159/173 (91.91%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of Sed0019025 vs. NCBI nr
Match: XP_008446336.1 (PREDICTED: HVA22-like protein c isoform X2 [Cucumis melo]) HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83 Identity = 157/173 (90.75%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.2e-57 Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 7.3e-52 Identity = 99/170 (58.24%), Postives = 136/170 (80.00%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 148.7 bits (374), Expect = 6.2e-35 Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-25 Identity = 63/154 (40.91%), Postives = 97/154 (62.99%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.3e-20 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy TrEMBL
Match: A0A1S3BEU0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.0e-85 Identity = 158/173 (91.33%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy TrEMBL
Match: A0A0A0KQK2 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G604990 PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84 Identity = 159/173 (91.91%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy TrEMBL
Match: A0A1S3BFI0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83 Identity = 157/173 (90.75%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy TrEMBL
Match: A0A6J1HX10 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467434 PE=3 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 4.9e-83 Identity = 154/173 (89.02%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Sed0019025 vs. ExPASy TrEMBL
Match: A0A6J1FZG8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449339 PE=3 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 4.9e-83 Identity = 154/173 (89.02%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Sed0019025 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 224.2 bits (570), Expect = 8.2e-59 Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = 0
BLAST of Sed0019025 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 204.9 bits (520), Expect = 5.2e-53 Identity = 99/170 (58.24%), Postives = 136/170 (80.00%), Query Frame = 0
BLAST of Sed0019025 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 148.7 bits (374), Expect = 4.4e-36 Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = 0
BLAST of Sed0019025 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26 Identity = 63/154 (40.91%), Postives = 97/154 (62.99%), Query Frame = 0
BLAST of Sed0019025 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 99.4 bits (246), Expect = 3.1e-21 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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