Sed0019018 (gene) Chayote v1

Overview


Name	Sed0019018
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SPEAR1
Location	LG11: 458680 .. 462255 (+)
RNA-Seq Expression	Sed0019018
Synteny	Sed0019018

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGATGCAATAATTGTTGGGGCTGTGAAAAAAGAGAGCTTAAAAAGAGGGCTTGAAAGATCTCTGGTTTTTCAGATTGCTGCCCAGAAAAATAAGTCATCCAATTTCTTTCTCTCTTTATTTTTTGAAAAAGAAGATAATATATGGGGAGTGGCTATTTTGGGGAGATGAATAATATTGACAAGAGGAGGATCGGGTTGGCGGCGTCGACGATGGCAGCATCGGGGAGGAGAGGGAGGAAGAGCGGTGGCGGCGGCGAGAAACCGAAGCAGCCTCAGAGAGGTTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGCTGTTCTGCTTATGGCCACTTCGCCGTAAATCTCTTTACCTCTTGGAATTCATTTTGGGATTTAAAAAAAAAAAAAAATTCAAATCATATTATCTCCTATCTATGAGTTATTTTCTTACGAAAAGTTTTTTTTTATTTTTTATTTTTGGACAATAGGTTAAGATGTCAGTTGAGATATGTTCATTTTAATTATCAAAATAGATTTTAATTCAATCTAAATTGGCCATATTCTTAAATTAGAGGTTAGAAGTTCAATTCCTAATCCCAAATATTAATGGTATTAAGAAGCTTGCATTTTCATGGTTTTTTTTTTTTTTCCATGAAGTTCATTTTGTTGGTATGAGAATTTATGAGAAGGGTTGGAATATTCGACAGATGATATATTTTGGGATTGGATTAAAATATTTTAATCGAATATTCATTTTAGTATCATGTATTTTCATACTTTTTTTTGAGTTCTAGAAATTTTAAACCTATTACCTGTTAGTTAGTAAATCTTACATCTATCATGAGAGCTTTACTCCTTTTGTCATGTATATTATTGTTGGATAAATATGAAGTCTATCCATGGTGCATCAGATTGGCTCAAGTAGTCAAAGAAAAATTCGAGAGTAATGAGTTCAATCTATGATGATCAGTTATCTTGAAATTAATTTCCTATAAATTTTTTGAATATCCAAATGTTGTAGGGTTAGACAGTATGTCCGTAACATTAGTCGAGTGTGCGAAAGCTGACCCACACAATCACGGATAAAAAAAAAAAAAAATCTATCTAACTTCTTATAAAAGATTGTGAGTCTCATCTTGTGATCTCCTTTCAGAATTAGAAATTTACCCCCCAAAAAAAAGAAGTTAAATTAGCTTTTATATATAATTAATAGTTTAATGAGTCAAATGTAGGGGGAAAATTGCTTGTTAGTTTTTTTTCTTTATAAATTTAATTTTCAATTTTCTTTTTGTTCATAGAGATTTGGTATATAGTTTTCTTTGTATTATTTACTTTAAATAAAAAATGCTCATGATTGAAGCTTGAATTTTATTTTTTGGGTTAATTTTGTTTACATGTAGGTTGATGACATGAGAATGCAAACAGCAGCTTCTTCTTTTTCTTACTCCACAACTGCTCAATCTTCTTCATCATCTCCTTCCTATGGCTTCCACCAAAACTTTATGGTCATTCTCTTTCTCTCTCTAAATTTTCTGGTCGATTTAATTTTTTTATAATCGAAAAATCAGAGTCGTTCACCCATAAATATCTTCTTACACTAATAATTGACCTCACTACATACGGCATTTTTTTATAATCGAAAAATCAGAGTCATTCACCCGTAAATATCTTTTTACACTAATAATTGACCTCACTACATACGACATTTACACTTTTTAATAAGAGGAAGCAAGGTTCACACTTTTTGTTTACTTAAACTATCTATTTTTACAAATCATTGATAGATAAACATTTCATTTTTTTAGTACAATAGAGGATTGTGGGAGTCGAACCACAAATAATGTAGTTACTAATATATCAAAATGTTGTTCCATACCACTCTCGTGGGCGATAAATAGATATTTGGCTTAATAGTAATAATCAAAATTATGAATTTCTACTCAATTATCTATTCATCCCCACTACATATTTTGTAAGAAAATCAGAAAGTTTGATTAATTACTGAATAAATTAAAGATTTTGTTTTTGAAAAAAATTATGTTTGACAATATATTTATTTGCTTACTTACTTTAAATGGATCCTAGGGAATGGGAGAATATGAAAGAGGAAGCTTCAGATATGGAGATTCTCAGCCGTCAACTTCTATAAGGTAATCCTTATTTTATTTTTTTCGATTCAATTATTGTTGTTATTACTGTTAATTTCTTTAAAAGATTTTTCTTGTAAGATGATTAGAGAAGAATTTAGACCTTTTATTTTTAATTTCTATGTATAAAAAAACAATTAAATTTGTGGTTAATTTGTGATATTTTAGATGGGACCAAAGTAACACATTTCTGGAGACCCAACATTTTGGGCAACCAAACATGACTGGACACCATTTCACTCCTCATGTACAGGTTAGTTATTGTATTTTCTTTAATTAATTTAAAATTTATGTGTATTTACATATTTTTTCATGTAAGAAACCTATGAAATTCTATCAATCAAATATCTTTTTATTTTTTTCTTTTTACGATTCGAATTTACCCTACAAGAATGTATGTTTTAACCAATTGAATTATGTTTAGATTAATATCTATTTCTATTAGTTGTTCATTAATTGACTACAAATTTTCATAGCTTCTTTCTTGTCTTTTTTTTCTCGAGCATGAGTGAAAAATTCGACCATTTAATCTCTTAGTCAAGAATATACTTTAACTAATTATATTATATATGTTTAAGTTGGTGTAAATTTAATTATTTAAGGTGAGAAAGATTGATGTCATATAATATTTAATTATTATCACACCAAGAGGCATGTATTTGAATTATTGCAACTACTTAAATTATGTTTTATATGGCCCTTAAAGAGGCAACCTTATTAGTAGAGTTTTGAAATTTTAAGTGTGTTCTTGAAAGTCTTTAAGTTTAGAATGAAGTGAATTTAGTTGTTTTTTTGTTTTTTCTTTTAAATTTCTAGAGTATGAACTTTAAAATGAATTAAAATGGATGGGAGTGTCAGATGATATGTAATGATCAAAGCTAACTATTGAGTTGAATGACTATCTATAATTGATGTCACAATTTTCTAGTTATCAAAAAACATATATTTAATATGATTTTAATGTTGCCTATATTTTCTATCGTGAATCATATTATTAATTAGTCGGTACGTAGAAAGATATGATTTGTTTTTTTTAACATAAAATGTGTGGAAAATGCAGGAATCAATGCACAGGAATATGAATACAAAATATGGTAGTGATTCAATTGGTTCAAGCAGTCAAAATTCTGAATCAAGTGAAACTCAAGAGCTAGATTTGGAGCTTAGATTGTCAATCTAAATTAAGTGGGTTTATTTCATACCATATTATATAAATAATTACAAACTGCACTGATCCTGTAATCTTTACCTAATTTATGAACCATGCCCTTCAGCATTAAAAGTTGTTTCAAACAGCCTCTTTTAGTTTGTACATTTGCAATCATACCCTTTTGTCAAGTTAAGTTTGATATAATTGTTGCATTTAGCATAAGAGGGTTAAAGTTTGATGAAAGGAGTATGTTTATTTTTTAGATGTTTGAGACTATTATT

mRNA sequence

GCGATGCAATAATTGTTGGGGCTGTGAAAAAAGAGAGCTTAAAAAGAGGGCTTGAAAGATCTCTGGTTTTTCAGATTGCTGCCCAGAAAAATAAGTCATCCAATTTCTTTCTCTCTTTATTTTTTGAAAAAGAAGATAATATATGGGGAGTGGCTATTTTGGGGAGATGAATAATATTGACAAGAGGAGGATCGGGTTGGCGGCGTCGACGATGGCAGCATCGGGGAGGAGAGGGAGGAAGAGCGGTGGCGGCGGCGAGAAACCGAAGCAGCCTCAGAGAGGTTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGCTGTTCTGCTTATGGCCACTTCGCCGTTGATGACATGAGAATGCAAACAGCAGCTTCTTCTTTTTCTTACTCCACAACTGCTCAATCTTCTTCATCATCTCCTTCCTATGGCTTCCACCAAAACTTTATGGGAATGGGAGAATATGAAAGAGGAAGCTTCAGATATGGAGATTCTCAGCCGTCAACTTCTATAAGATGGGACCAAAGTAACACATTTCTGGAGACCCAACATTTTGGGCAACCAAACATGACTGGACACCATTTCACTCCTCATGTACAGGAATCAATGCACAGGAATATGAATACAAAATATGGTAGTGATTCAATTGGTTCAAGCAGTCAAAATTCTGAATCAAGTGAAACTCAAGAGCTAGATTTGGAGCTTAGATTGTCAATCTAAATTAAGTGGGTTTATTTCATACCATATTATATAAATAATTACAAACTGCACTGATCCTGTAATCTTTACCTAATTTATGAACCATGCCCTTCAGCATTAAAAGTTGTTTCAAACAGCCTCTTTTAGTTTGTACATTTGCAATCATACCCTTTTGTCAAGTTAAGTTTGATATAATTGTTGCATTTAGCATAAGAGGGTTAAAGTTTGATGAAAGGAGTATGTTTATTTTTTAGATGTTTGAGACTATTATT

Coding sequence (CDS)

ATGGGGAGTGGCTATTTTGGGGAGATGAATAATATTGACAAGAGGAGGATCGGGTTGGCGGCGTCGACGATGGCAGCATCGGGGAGGAGAGGGAGGAAGAGCGGTGGCGGCGGCGAGAAACCGAAGCAGCCTCAGAGAGGTTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGCTGTTCTGCTTATGGCCACTTCGCCGTTGATGACATGAGAATGCAAACAGCAGCTTCTTCTTTTTCTTACTCCACAACTGCTCAATCTTCTTCATCATCTCCTTCCTATGGCTTCCACCAAAACTTTATGGGAATGGGAGAATATGAAAGAGGAAGCTTCAGATATGGAGATTCTCAGCCGTCAACTTCTATAAGATGGGACCAAAGTAACACATTTCTGGAGACCCAACATTTTGGGCAACCAAACATGACTGGACACCATTTCACTCCTCATGTACAGGAATCAATGCACAGGAATATGAATACAAAATATGGTAGTGATTCAATTGGTTCAAGCAGTCAAAATTCTGAATCAAGTGAAACTCAAGAGCTAGATTTGGAGCTTAGATTGTCAATCTAA

Protein sequence

MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCSAYGHFAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEYERGSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDSIGSSSQNSESSETQELDLELRLSI

Homology

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BLAST of Sed0019018 vs. NCBI nr
Match: XP_011648648.1 (protein SPEAR1 [Cucumis sativus] >KGN60603.1 hypothetical protein Csa_019375 [Cucumis sativus] >QBL95714.1 SPOROCYTELESS-like EAR-containing protein 1 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 4.3e-74
Identity = 163/205 (79.51%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGSGYFGEMNNI+KRR G   S  AA GRRGRK GGGGEKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSGYFGEMNNIEKRRSG---SPSAAGGRRGRK-GGGGEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCSAYGHF-----AVDDMRMQTAAS-SFSYSTTAQSSSSSP-SYGFHQNFMGMGEYER 120
           EMGC+AY HF     A DD RMQT  + +FSYS+T +SS+SSP SYGFHQNFMGMGEYER
Sbjct: 61  EMGCAAYSHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYER 120

Query: 121 GSFRYGDSQPST--SIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESM-HRNMNTKYGSD 180
           GSFRYGDSQ +T  S+RWD SNTFLETQHFGQPNM+GH F PHVQ+SM H+N+NTKYGSD
Sbjct: 121 GSFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGSD 180

Query: 181 SIGSSSQNSESSETQELDLELRLSI 196
           S+GSSSQNSESSETQELDLELRLSI
Sbjct: 181 SMGSSSQNSESSETQELDLELRLSI 201

[Close]

BLAST of Sed0019018 vs. NCBI nr
Match: XP_008458547.1 (PREDICTED: protein SPEAR1 [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 5.6e-74
Identity = 163/204 (79.90%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGSGYFGEMNNI+KRR G   S  AA GRRGRK GGGGEKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSGYFGEMNNIEKRRSG---SPAAAGGRRGRK-GGGGEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCSAYGHF-----AVDDMRMQTAA-SSFSYSTTAQSSSSSPSYGFHQNFMGMGEYERG 120
           EMGC+AY HF     A DDMRMQT   S+FSYS+T  SSSS  SYGFHQNFMGMGEYERG
Sbjct: 61  EMGCAAYSHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYGDSQPST--SIRWDQSNTFLETQHFGQPNMTGHHFTPHVQES-MHRNMNTKYGSDS 180
           SFRYGDSQ +T  S+RWD SNTFLETQHFGQPNM+GH F  HVQ+S +H NMNTKYGSDS
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSDS 180

Query: 181 IGSSSQNSESSETQELDLELRLSI 196
           +GSSSQNSESSETQELDLELRLSI
Sbjct: 181 MGSSSQNSESSETQELDLELRLSI 200

[Close]

BLAST of Sed0019018 vs. NCBI nr
Match: XP_038889470.1 (protein SPEAR1-like [Benincasa hispida])

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-72
Identity = 162/208 (77.88%), Postives = 174/208 (83.65%), Query Frame = 0


Query: 1   MGSGYFGEM-----NNIDKRRIGLAASTMAA-SGRRGRKSGGGGEKPKQPQRGLGVAQLE 60
           MGSGYFGEM     NNI+KRR G  A+  AA +GRRGRK G GGEKPKQPQRGLGVAQLE
Sbjct: 1   MGSGYFGEMNMGNNNNIEKRRSGSPATGAAAGTGRRGRK-GSGGEKPKQPQRGLGVAQLE 60

Query: 61  KIRLHGEMGCSAY-GHF-----AVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGM 120
           KIRLHGEMGC+AY GHF     A DDMRMQT A SFSYS+T  SSSS   Y FHQNFMG+
Sbjct: 61  KIRLHGEMGCAAYSGHFYPNLSAGDDMRMQTTA-SFSYSSTQSSSSSPNFYAFHQNFMGI 120

Query: 121 GEYERGSFRYGDSQPST-SIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKY 180
           GEYERGS RYGDSQP+T S RWD SNTFLETQHFGQPNMTGH F PHVQ+S+H+NMNTKY
Sbjct: 121 GEYERGSLRYGDSQPTTSSFRWDPSNTFLETQHFGQPNMTGHLFNPHVQDSIHKNMNTKY 180

Query: 181 GSDSIGSSSQNSESSETQELDLELRLSI 196
           GSDS+GSSSQNSESSET+ELDLELRLSI
Sbjct: 181 GSDSMGSSSQNSESSETRELDLELRLSI 206

[Close]

BLAST of Sed0019018 vs. NCBI nr
Match: XP_023522169.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 9.6e-66
Identity = 147/206 (71.36%), Postives = 162/206 (78.64%), Query Frame = 0


Query: 1   MGSGYFGEM----NNIDKRRIG--LAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLE 60
           MGSGYFGEM    NNIDKRR G   +A+ +A   RRGRK GGGGEKPKQPQRGLGVAQLE
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSPSSAAAVATVVRRGRKGGGGGEKPKQPQRGLGVAQLE 60

Query: 61  KIRLHGEMGCSAYGHF-----AVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMG 120
           KIRLHGEMGC+AYGH      A DDMR++TA            SSSSPSYGFHQNFMGMG
Sbjct: 61  KIRLHGEMGCAAYGHLYPNLSASDDMRIETA------------SSSSPSYGFHQNFMGMG 120

Query: 121 EYERGSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGS 180
           E+ERGSF YGDSQP TS+RWD ++TFLETQHFGQPNMTGH F  H+Q+S+H N+N KYGS
Sbjct: 121 EHERGSFGYGDSQPITSLRWDPTHTFLETQHFGQPNMTGHLFNTHLQDSIHGNINVKYGS 180

Query: 181 DSIGSSSQNSESSETQELDLELRLSI 196
           DS+ SSSQNSESS   ELDLELRLSI
Sbjct: 181 DSMTSSSQNSESS---ELDLELRLSI 191

[Close]

BLAST of Sed0019018 vs. NCBI nr
Match: XP_022999537.1 (protein SPEAR3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 245.7 bits (626), Expect = 3.2e-61
Identity = 144/204 (70.59%), Postives = 155/204 (75.98%), Query Frame = 0


Query: 1   MGSGYFGEM----NNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKI 60
           MGSGYFGEM    NNIDKRR G AA       RRGRK GGGGEKPKQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSAAVV-----RRGRK-GGGGEKPKQPQRGLGVAQLEKI 60

Query: 61  RLHGEMGCSAYGH-----FAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEY 120
           RLHGEMGC+AYGH      A DDMR++TA            SSSSPSYGFHQNFMGMGE+
Sbjct: 61  RLHGEMGCAAYGHPYPYLSASDDMRIETA------------SSSSPSYGFHQNFMGMGEH 120

Query: 121 ERGSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDS 180
           ERGS R GDSQP+TS+RWD S+TFLET HFGQPNMTGH F  HVQ+S+  N+N KYGSDS
Sbjct: 121 ERGSLRCGDSQPTTSLRWDPSHTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDS 180

Query: 181 IGSSSQNSESSETQELDLELRLSI 196
           +  S QNSESS   ELDLELRLSI
Sbjct: 181 MRLSRQNSESS---ELDLELRLSI 183

[Close]

BLAST of Sed0019018 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 88/210 (41.90%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGS +FG    +         S+ ++  +RG K+  G +KPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSSFFGR-PKMGGSSSSSPTSSSSSPAKRG-KNKNGSDKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCSAYGHFA-------VDDMRMQ-------TAASSFSYSTTAQSSSSSPSYGFHQNFM 120
           E  C+++  +         +D+R+Q       +++ SFSY   A SS     YGFH N M
Sbjct: 61  EYNCNSFNTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSY---ASSSPPPAPYGFHPNMM 120

Query: 121 ---GMGEYERGSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNM 180
                 +YER + RYGDSQP  +  W+ S   LE+QHF +PN T  HF    Q ++    
Sbjct: 121 MNANNDQYERTTIRYGDSQPHRAPSWNPSYGILESQHFVEPNTT-RHFLHEDQRNI---- 180

Query: 181 NTKYGSDSIGSSSQNSESSETQELDLELRL 194
                  S+GS  QN E+SE  ELDLELRL
Sbjct: 181 -------SLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Sed0019018 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.0e-23
Identity = 83/202 (41.09%), Postives = 110/202 (54.46%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKR--RIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRL 60
           MGS +FG  N +          +S+ + + RRG+K+  G EKPKQPQRGLGVAQLEKIRL
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKN--GSEKPKQPQRGLGVAQLEKIRL 60

Query: 61  HGEMGCSAYGH-----FAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEYER 120
           HGEM C+++       +  +D+RMQ   SS         S SS  YGF+ N M MG +  
Sbjct: 61  HGEMSCNSFNSYNPSLYPQEDVRMQGGYSSI-------PSQSSAPYGFYPNMM-MGVHR- 120

Query: 121 GSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDSIG 180
                 D     ++ W+ S   LE+QH  +PN+T H        +  R       S S+G
Sbjct: 121 ------DQYDRATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRR-------SKSLG 178

Query: 181 SSSQNSESSETQELDLELRLSI 196
           S  Q+S SSE QE+DLELRLS+
Sbjct: 181 SGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Sed0019018 vs. ExPASy TrEMBL
Match: A0A0A0LFV0 (SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.1e-74
Identity = 163/205 (79.51%), Postives = 177/205 (86.34%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGSGYFGEMNNI+KRR G   S  AA GRRGRK GGGGEKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSGYFGEMNNIEKRRSG---SPSAAGGRRGRK-GGGGEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCSAYGHF-----AVDDMRMQTAAS-SFSYSTTAQSSSSSP-SYGFHQNFMGMGEYER 120
           EMGC+AY HF     A DD RMQT  + +FSYS+T +SS+SSP SYGFHQNFMGMGEYER
Sbjct: 61  EMGCAAYSHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGMGEYER 120

Query: 121 GSFRYGDSQPST--SIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESM-HRNMNTKYGSD 180
           GSFRYGDSQ +T  S+RWD SNTFLETQHFGQPNM+GH F PHVQ+SM H+N+NTKYGSD
Sbjct: 121 GSFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNPHVQDSMIHKNINTKYGSD 180

Query: 181 SIGSSSQNSESSETQELDLELRLSI 196
           S+GSSSQNSESSETQELDLELRLSI
Sbjct: 181 SMGSSSQNSESSETQELDLELRLSI 201

[Close]

BLAST of Sed0019018 vs. ExPASy TrEMBL
Match: A0A1S3C7M3 (protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.7e-74
Identity = 163/204 (79.90%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGSGYFGEMNNI+KRR G   S  AA GRRGRK GGGGEKPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSGYFGEMNNIEKRRSG---SPAAAGGRRGRK-GGGGEKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCSAYGHF-----AVDDMRMQTAA-SSFSYSTTAQSSSSSPSYGFHQNFMGMGEYERG 120
           EMGC+AY HF     A DDMRMQT   S+FSYS+T  SSSS  SYGFHQNFMGMGEYERG
Sbjct: 61  EMGCAAYSHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMGEYERG 120

Query: 121 SFRYGDSQPST--SIRWDQSNTFLETQHFGQPNMTGHHFTPHVQES-MHRNMNTKYGSDS 180
           SFRYGDSQ +T  S+RWD SNTFLETQHFGQPNM+GH F  HVQ+S +H NMNTKYGSDS
Sbjct: 121 SFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNSHVQDSIIHNNMNTKYGSDS 180

Query: 181 IGSSSQNSESSETQELDLELRLSI 196
           +GSSSQNSESSETQELDLELRLSI
Sbjct: 181 MGSSSQNSESSETQELDLELRLSI 200

[Close]

BLAST of Sed0019018 vs. ExPASy TrEMBL
Match: A0A6J1KB48 (protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-61
Identity = 144/204 (70.59%), Postives = 155/204 (75.98%), Query Frame = 0


Query: 1   MGSGYFGEM----NNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKI 60
           MGSGYFGEM    NNIDKRR G AA       RRGRK GGGGEKPKQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSAAVV-----RRGRK-GGGGEKPKQPQRGLGVAQLEKI 60

Query: 61  RLHGEMGCSAYGH-----FAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEY 120
           RLHGEMGC+AYGH      A DDMR++TA            SSSSPSYGFHQNFMGMGE+
Sbjct: 61  RLHGEMGCAAYGHPYPYLSASDDMRIETA------------SSSSPSYGFHQNFMGMGEH 120

Query: 121 ERGSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDS 180
           ERGS R GDSQP+TS+RWD S+TFLET HFGQPNMTGH F  HVQ+S+  N+N KYGSDS
Sbjct: 121 ERGSLRCGDSQPTTSLRWDPSHTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDS 180

Query: 181 IGSSSQNSESSETQELDLELRLSI 196
           +  S QNSESS   ELDLELRLSI
Sbjct: 181 MRLSRQNSESS---ELDLELRLSI 183

[Close]

BLAST of Sed0019018 vs. ExPASy TrEMBL
Match: A0A6J1HQB1 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.8e-57
Identity = 135/198 (68.18%), Postives = 145/198 (73.23%), Query Frame = 0


Query: 1   MGSGYFGEMN--NIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRL 60
           MGSGYFGEMN  NIDKRR G  A+  AA+GRRGRK GGGGEKPKQPQRGLGVAQLEKIRL
Sbjct: 1   MGSGYFGEMNMGNIDKRRSGSPAA--AAAGRRGRK-GGGGEKPKQPQRGLGVAQLEKIRL 60

Query: 61  HGEMGCSAYGHFAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEYERGSFRY 120
           HGEMGC+ YGHF                              +     GMGEYERGSFRY
Sbjct: 61  HGEMGCAGYGHF------------------------------YPNLSAGMGEYERGSFRY 120

Query: 121 GDSQP-STSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDSIGSSSQ 180
           GDSQP +TSIRW+ SNT +ETQHFG+PNMTGH   P V +SMH+NMNTKYGSDSIGSSSQ
Sbjct: 121 GDSQPTTTSIRWNMSNTSMETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQ 165

Query: 181 NSESSETQELDLELRLSI 196
           NSESSET ELDLELRLSI
Sbjct: 181 NSESSETHELDLELRLSI 165

[Close]

BLAST of Sed0019018 vs. ExPASy TrEMBL
Match: A0A6J1FCT6 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111444227 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.8e-57
Identity = 136/198 (68.69%), Postives = 146/198 (73.74%), Query Frame = 0


Query: 1   MGSGYFGEMN--NIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRL 60
           MGSGYFGEMN  NIDKRR    A+  AA+GRRGRK GGGGEKPKQPQRGLGVAQLEKIRL
Sbjct: 1   MGSGYFGEMNMGNIDKRRSWSPAA--AAAGRRGRK-GGGGEKPKQPQRGLGVAQLEKIRL 60

Query: 61  HGEMGCSAYGHFAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEYERGSFRY 120
           HGEMGC+ YGHF               Y T +                GMGEYERGSFRY
Sbjct: 61  HGEMGCAGYGHF---------------YPTLS---------------AGMGEYERGSFRY 120

Query: 121 GDSQP-STSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDSIGSSSQ 180
           GDSQP +TSIRW+ SNT LETQHFG+PNMTGH   P V +SMH+NMNTKYGSDSIGSSSQ
Sbjct: 121 GDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQ 165

Query: 181 NSESSETQELDLELRLSI 196
           NS+SSET ELDLELRLSI
Sbjct: 181 NSKSSETHELDLELRLSI 165

[Close]

BLAST of Sed0019018 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 9.4e-27
Identity = 88/210 (41.90%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKRRIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRLHG 60
           MGS +FG    +         S+ ++  +RG K+  G +KPKQPQRGLGVAQLEKIRLHG
Sbjct: 1   MGSSFFGR-PKMGGSSSSSPTSSSSSPAKRG-KNKNGSDKPKQPQRGLGVAQLEKIRLHG 60

Query: 61  EMGCSAYGHFA-------VDDMRMQ-------TAASSFSYSTTAQSSSSSPSYGFHQNFM 120
           E  C+++  +         +D+R+Q       +++ SFSY   A SS     YGFH N M
Sbjct: 61  EYNCNSFNTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSY---ASSSPPPAPYGFHPNMM 120

Query: 121 ---GMGEYERGSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNM 180
                 +YER + RYGDSQP  +  W+ S   LE+QHF +PN T  HF    Q ++    
Sbjct: 121 MNANNDQYERTTIRYGDSQPHRAPSWNPSYGILESQHFVEPNTT-RHFLHEDQRNI---- 180

Query: 181 NTKYGSDSIGSSSQNSESSETQELDLELRL 194
                  S+GS  QN E+SE  ELDLELRL
Sbjct: 181 -------SLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Sed0019018 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 5.7e-24
Identity = 83/202 (41.09%), Postives = 110/202 (54.46%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKR--RIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRL 60
           MGS +FG  N +          +S+ + + RRG+K+  G EKPKQPQRGLGVAQLEKIRL
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKN--GSEKPKQPQRGLGVAQLEKIRL 60

Query: 61  HGEMGCSAYGH-----FAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEYER 120
           HGEM C+++       +  +D+RMQ   SS         S SS  YGF+ N M MG +  
Sbjct: 61  HGEMSCNSFNSYNPSLYPQEDVRMQGGYSSI-------PSQSSAPYGFYPNMM-MGVHR- 120

Query: 121 GSFRYGDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDSIG 180
                 D     ++ W+ S   LE+QH  +PN+T H        +  R       S S+G
Sbjct: 121 ------DQYDRATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRR-------SKSLG 178

Query: 181 SSSQNSESSETQELDLELRLSI 196
           S  Q+S SSE QE+DLELRLS+
Sbjct: 181 SGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Sed0019018 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 9.4e-19
Identity = 72/197 (36.55%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 1   MGSGYFGEMNNIDKR--RIGLAASTMAASGRRGRKSGGGGEKPKQPQRGLGVAQLEKIRL 60
           MGS +FG  N +          +S+ + + RRG+K+  G EKPKQPQRGLGVAQLEKIRL
Sbjct: 1   MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKN--GSEKPKQPQRGLGVAQLEKIRL 60

Query: 61  HGEMGCSAYGHFAVDDMRMQTAASSFSYSTTAQSSSSSPSYGFHQNFMGMGEYERGSFRY 120
           HGEM C+++  +                     + S  P  G H++     +Y+R     
Sbjct: 61  HGEMSCNSFNSY---------------------NPSLYPQMGVHRD-----QYDR----- 120

Query: 121 GDSQPSTSIRWDQSNTFLETQHFGQPNMTGHHFTPHVQESMHRNMNTKYGSDSIGSSSQN 180
                  ++ W+ S   LE+QH  +PN+T H        +  R       S S+GS  Q+
Sbjct: 121 ------ATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRR-------SKSLGSGIQH 151

Query: 181 SESSETQELDLELRLSI 196
           S SSE QE+DLELRLS+
Sbjct: 181 SGSSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Sed0019018 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648648.1	4.3e-74	79.51	protein SPEAR1 [Cucumis sativus] >KGN60603.1 hypothetical protein Csa_019375 [Cu...	[more]
XP_008458547.1	5.6e-74	79.90	PREDICTED: protein SPEAR1 [Cucumis melo]	[more]
XP_038889470.1	2.4e-72	77.88	protein SPEAR1-like [Benincasa hispida]	[more]
XP_023522169.1	9.6e-66	71.36	protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-...	[more]
XP_022999537.1	3.2e-61	70.59	protein SPEAR3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0019018 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	1.3e-25	41.90	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	8.0e-23	41.09	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of Sed0019018 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFV0	2.1e-74	79.51	SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1...	[more]
A0A1S3C7M3	2.7e-74	79.90	protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1	[more]
A0A6J1KB48	1.6e-61	70.59	protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 ...	[more]
A0A6J1HQB1	1.8e-57	68.18	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111465705 PE=4 SV=1	[more]
A0A6J1FCT6	8.8e-57	68.69	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111444227 PE=4 SV=1	[more]

BLAST of Sed0019018 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28840.1	9.4e-27	41.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	5.7e-24	41.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	9.4e-19	36.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..48
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..195
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019018.1	Sed0019018.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity