Sed0019013 (gene) Chayote v1

Overview


Name	Sed0019013
Type	gene
Organism	Sechium edule (Chayote v1)
Description	pathogenesis-related protein 1-like
Location	LG10: 36075208 .. 36075998 (-)
RNA-Seq Expression	Sed0019013
Synteny	Sed0019013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAGCAAAGGCATCCATCCCAATTTCCCACACCAATTTCTAAGCATTTTCCAAATCTCAAACCAAAATGGCTCTCCTCAAGGTCTCCTTCCCTTTGCTTTTTGTCTTGATTACTTCCCTCATGTTTCCCTCCTCTCTTGGTCAAGACTCACCCCAAGACTTTGTCGATGCCCATAACGCTGCACGAGCTGAAGTTGGCGTCGGACCCATCCAATGGGACGAAAATGTTGCAAACTATGCTCGGCAATATGCCAACCAACGTGCCAATGATTGTGGAATGATGCACTCTGGTGGGTCTTATGGGGAGAATCTTGCAATGAGTTCTGCCGACTTGTCAGGCACCAATGCAGTTCAAATGTGGGTGGACGAGAAACAATTCTATGACTATGCCTCCAACTCGTGTGTTGGCGGCGAGTGTCTCCACTACACTCAGGTGGTGTGGAAGAACTCTGCAAGAGTTGGATGTGCAAAAGTTAGTTGCAATAGTGGCGGTACTTTTATCACTTGCAACTATGACCCGCCCGGTAATTATGTAGACCAGAGACCATATTGAAAGGATACTTTCAACTATAACTAAATATGATATATTAATATCAAGAGTCAATAAAAGAAGCTCAAGAAAAGGGTAGTATATCCCTTTTAACTATATCTCTTGGTAATGTGTTTTATGTTGCATACCCTAGAGGCCTTAGGTCTCATTTGGGGACATGAACATTAGTTTGCATCTTATTTGGTTGCTCTATTTTGTTGGCTATTTGTAGCCCTTTAATACTATTGTTGGTTTGTTTTA

mRNA sequence

AAATAGCAAAGGCATCCATCCCAATTTCCCACACCAATTTCTAAGCATTTTCCAAATCTCAAACCAAAATGGCTCTCCTCAAGGTCTCCTTCCCTTTGCTTTTTGTCTTGATTACTTCCCTCATGTTTCCCTCCTCTCTTGGTCAAGACTCACCCCAAGACTTTGTCGATGCCCATAACGCTGCACGAGCTGAAGTTGGCGTCGGACCCATCCAATGGGACGAAAATGTTGCAAACTATGCTCGGCAATATGCCAACCAACGTGCCAATGATTGTGGAATGATGCACTCTGGTGGGTCTTATGGGGAGAATCTTGCAATGAGTTCTGCCGACTTGTCAGGCACCAATGCAGTTCAAATGTGGGTGGACGAGAAACAATTCTATGACTATGCCTCCAACTCGTGTGTTGGCGGCGAGTGTCTCCACTACACTCAGGTGGTGTGGAAGAACTCTGCAAGAGTTGGATGTGCAAAAGTTAGTTGCAATAGTGGCGGTACTTTTATCACTTGCAACTATGACCCGCCCGGTAATTATGTAGACCAGAGACCATATTGAAAGGATACTTTCAACTATAACTAAATATGATATATTAATATCAAGAGTCAATAAAAGAAGCTCAAGAAAAGGGTAGTATATCCCTTTTAACTATATCTCTTGGTAATGTGTTTTATGTTGCATACCCTAGAGGCCTTAGGTCTCATTTGGGGACATGAACATTAGTTTGCATCTTATTTGGTTGCTCTATTTTGTTGGCTATTTGTAGCCCTTTAATACTATTGTTGGTTTGTTTTA

Coding sequence (CDS)

ATGGCTCTCCTCAAGGTCTCCTTCCCTTTGCTTTTTGTCTTGATTACTTCCCTCATGTTTCCCTCCTCTCTTGGTCAAGACTCACCCCAAGACTTTGTCGATGCCCATAACGCTGCACGAGCTGAAGTTGGCGTCGGACCCATCCAATGGGACGAAAATGTTGCAAACTATGCTCGGCAATATGCCAACCAACGTGCCAATGATTGTGGAATGATGCACTCTGGTGGGTCTTATGGGGAGAATCTTGCAATGAGTTCTGCCGACTTGTCAGGCACCAATGCAGTTCAAATGTGGGTGGACGAGAAACAATTCTATGACTATGCCTCCAACTCGTGTGTTGGCGGCGAGTGTCTCCACTACACTCAGGTGGTGTGGAAGAACTCTGCAAGAGTTGGATGTGCAAAAGTTAGTTGCAATAGTGGCGGTACTTTTATCACTTGCAACTATGACCCGCCCGGTAATTATGTAGACCAGAGACCATATTGA

Protein sequence

MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQVVWKNSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY

Homology

[Close]

BLAST of Sed0019013 vs. NCBI nr
Match: XP_008455066.1 (PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo] >KAA0031385.1 basic form of pathogenesis-related protein 1 [Cucumis melo var. makuwa] >TYK06837.1 basic form of pathogenesis-related protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 4.2e-67
Identity = 124/160 (77.50%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 3   LLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYA 62
           L  +S  LLF L +S +F SS+ QDSPQDFVDAHNAARA+VGVGP+ WDE VANYA+QYA
Sbjct: 5   LKMISLSLLFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYAQQYA 64

Query: 63  NQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQ 122
           NQ  NDC M+HS G YGENLA SSADLSGTNAVQMWV+EKQFYDYASNSCVG EC HYTQ
Sbjct: 65  NQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSECRHYTQ 124

Query: 123 VVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
           VVWKNS ++GCAKV C N+GGTFITCNYDP GNYV+QRPY
Sbjct: 125 VVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Sed0019013 vs. NCBI nr
Match: XP_022952869.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 261.2 bits (666), Expect = 6.1e-66
Identity = 126/161 (78.26%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQ 60
           MAL+ +S  LL VL TS+MFP S+ QD  QDFVDAHNAARA+VGVGPIQWDE VANYARQ
Sbjct: 1   MALINLSLSLLCVLSTSIMFP-SMAQDMSQDFVDAHNAARAQVGVGPIQWDETVANYARQ 60

Query: 61  YANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHY 120
           YANQRANDC M+HS G YGENLA SSADLS T+AVQMWV+EKQFYDY SNSC+G EC HY
Sbjct: 61  YANQRANDCQMVHSNGPYGENLAGSSADLSCTDAVQMWVNEKQFYDYNSNSCLGNECRHY 120

Query: 121 TQVVWKNSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           TQVVW  S R+GCAKV CNSGGTFITCNYDPPGNY  Q PY
Sbjct: 121 TQVVWSKSVRIGCAKVRCNSGGTFITCNYDPPGNYEGQWPY 160

[Close]

BLAST of Sed0019013 vs. NCBI nr
Match: XP_023554792.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo] >XP_023554793.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo] >XP_023554797.1 pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 3.3e-64
Identity = 124/161 (77.02%), Postives = 133/161 (82.61%), Query Frame = 0


Query: 1   MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQ 60
           MAL  +S  LL VL TS+MFP S+ QD  QDFVDAHNAARA+VGVGPIQWDE VANYARQ
Sbjct: 1   MALTNLSISLLCVLSTSIMFP-SMAQDMSQDFVDAHNAARAQVGVGPIQWDETVANYARQ 60

Query: 61  YANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHY 120
           YANQRA DC M+HS G YGENLA SSADLS T+AVQMWV+EKQFYDY SNSC+G EC HY
Sbjct: 61  YANQRAKDCQMVHSNGPYGENLAGSSADLSCTDAVQMWVNEKQFYDYNSNSCLGNECRHY 120

Query: 121 TQVVWKNSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           TQVVW  S R+GCA V CNSGGTFITCNYDPPGNY  Q PY
Sbjct: 121 TQVVWSKSVRIGCATVRCNSGGTFITCNYDPPGNYEGQWPY 160

[Close]

BLAST of Sed0019013 vs. NCBI nr
Match: XP_004136924.2 (pathogenesis-related protein 1 [Cucumis sativus] >KGN43831.1 hypothetical protein Csa_017210 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 4.4e-64
Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MALL--KVSFPLLFVLITS-LMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANY 60
           MALL   +S  LLF L +S ++F SS+ QD PQ+FVDAHNAARA+VGVGP+ WDE VANY
Sbjct: 1   MALLMKMISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANY 60

Query: 61  ARQYANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGEC 120
           A+QYANQ  NDC M+HS G YGENLA SSADLSGTNAVQMWV+EKQFYDYASNSCV  EC
Sbjct: 61  AQQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSEC 120

Query: 121 LHYTQVVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
            HYTQVVWKNS ++GCAKV C N+GGTFITCNYDP GNYV+QRPY
Sbjct: 121 RHYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of Sed0019013 vs. NCBI nr
Match: XP_022972506.1 (pathogenesis-related protein PR-1 type-like [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59
Identity = 113/163 (69.33%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQ 60
           M L K+S  L +V+++  MF SSL QDSPQDFV+AHNAARA+VGVGPI+WDE VA++ARQ
Sbjct: 1   MDLFKLSLSLFYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFARQ 60

Query: 61  YANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGE-CLH 120
           YANQR NDC ++HSGG YGEN+A  S DLSGTNAV+MWVDEKQFY+ ++N+C  G+ C H
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCGH 120

Query: 121 YTQVVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
           YTQVVW+NS R+GCAKV C N+ GTFITCNYDPPGN V QRP+
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

[Close]

BLAST of Sed0019013 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.7e-53
Identity = 91/145 (62.76%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 17  SLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRANDCGMMHSGG 76
           +++  SS  Q+SPQD+++ HNAAR +VGVGP+ WD  +A YA+ YANQR  DCGM+HS G
Sbjct: 15  AILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHG 74

Query: 77  SYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQVVWKNSARVGCAKV 136
            YGENLA +   L+   AV+MWVDEK+FYDY SNSCVGG C HYTQVVW+NS R+GCA+V
Sbjct: 75  PYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARV 134

Query: 137 SCNSGGTFITCNYDPPGNYVDQRPY 162
             N+G  FITCNYDPPGN++ QRP+
Sbjct: 135 RSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Sed0019013 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.5e-51
Identity = 92/152 (60.53%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 10  LLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRANDC 69
           +L  L+ +L+ P    QDS QD+V+AHN AR+++GVGP+QWDE +A YAR YANQ   DC
Sbjct: 12  ILAALVGALVVPLK-AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDC 71

Query: 70  GMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQVVWKNSA 129
            ++HS G YGENLA S  DLSG  AV +WV+EK  Y+Y +N+C  G C HYTQVVW+NS 
Sbjct: 72  RLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSV 131

Query: 130 RVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           R+GCAKV CN+GGT I+CNYDPPGNY +Q+PY
Sbjct: 132 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Sed0019013 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.8e-51
Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 8   FPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRAN 67
           F ++FV +   +   S  QDSPQD++  HN AR  VGVGP+QWDE VA YAR YA Q   
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 68  DCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQVVWKN 127
           +C ++HSGG YGENLA  S DLSG +AV MWV EK  Y+YA+N+C  G C HYTQVVW+ 
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 128

Query: 128 SARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           S R+GCAKV CN+GGT I+CNYDP GNYV+++PY
Sbjct: 129 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Sed0019013 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.8e-49
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 15  ITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRANDCGMMHS 74
           IT ++F SS  Q   ++F++AHNAAR  VGVGP+ WD+ +A YA+ YANQRA+DCGM+HS
Sbjct: 11  ITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHS 70

Query: 75  GGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGE-CLHYTQVVWKNSARVGC 134
            G YGENLA +   L+   AV+MW DEKQ+YDY SN+C  G+ C HYTQVVW+ S R+GC
Sbjct: 71  DGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGC 130

Query: 135 AKVSCNSGGTFITCNYDPPGNYVD 158
           A+V CNSG  FITCNYDPPGNY+D
Sbjct: 131 ARVRCNSGWVFITCNYDPPGNYID 154

[Close]

BLAST of Sed0019013 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-48
Identity = 90/159 (56.60%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 9   PLLFVLITSLMF----PSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQ 68
           P  F++ T L+F     SS  Q+S QD++DAHN ARA+VGV P+ WD  VA YA+ Y +Q
Sbjct: 10  PSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQ 69

Query: 69  RANDCGMMHSGGSYGENLAMSSAD-LSGTNAVQMWVDEKQFYDYASNSCVGGE-CLHYTQ 128
            A DC ++HS G YGENLA  S D ++   AV+MWVDEKQ+YD+ SN+C  G+ C HYTQ
Sbjct: 70  LAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQ 129

Query: 129 VVWKNSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           VVW+NS RVGCA+V CN+GG  ++CNYDPPGN + Q PY
Sbjct: 130 VVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Sed0019013 vs. ExPASy TrEMBL
Match: A0A5D3C4Q0 (Basic form of pathogenesis-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001410 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 124/160 (77.50%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 3   LLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYA 62
           L  +S  LLF L +S +F SS+ QDSPQDFVDAHNAARA+VGVGP+ WDE VANYA+QYA
Sbjct: 5   LKMISLSLLFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYAQQYA 64

Query: 63  NQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQ 122
           NQ  NDC M+HS G YGENLA SSADLSGTNAVQMWV+EKQFYDYASNSCVG EC HYTQ
Sbjct: 65  NQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSECRHYTQ 124

Query: 123 VVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
           VVWKNS ++GCAKV C N+GGTFITCNYDP GNYV+QRPY
Sbjct: 125 VVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Sed0019013 vs. ExPASy TrEMBL
Match: A0A1S3BZL6 (basic form of pathogenesis-related protein 1 OS=Cucumis melo OX=3656 GN=LOC103495331 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 124/160 (77.50%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 3   LLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYA 62
           L  +S  LLF L +S +F SS+ QDSPQDFVDAHNAARA+VGVGP+ WDE VANYA+QYA
Sbjct: 5   LKMISLSLLFFLTSSTIFTSSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYAQQYA 64

Query: 63  NQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQ 122
           NQ  NDC M+HS G YGENLA SSADLSGTNAVQMWV+EKQFYDYASNSCVG EC HYTQ
Sbjct: 65  NQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVGSECRHYTQ 124

Query: 123 VVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
           VVWKNS ++GCAKV C N+GGTFITCNYDP GNYV+QRPY
Sbjct: 125 VVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 164

[Close]

BLAST of Sed0019013 vs. ExPASy TrEMBL
Match: A0A6J1GMZ5 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455433 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.9e-66
Identity = 126/161 (78.26%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQ 60
           MAL+ +S  LL VL TS+MFP S+ QD  QDFVDAHNAARA+VGVGPIQWDE VANYARQ
Sbjct: 1   MALINLSLSLLCVLSTSIMFP-SMAQDMSQDFVDAHNAARAQVGVGPIQWDETVANYARQ 60

Query: 61  YANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHY 120
           YANQRANDC M+HS G YGENLA SSADLS T+AVQMWV+EKQFYDY SNSC+G EC HY
Sbjct: 61  YANQRANDCQMVHSNGPYGENLAGSSADLSCTDAVQMWVNEKQFYDYNSNSCLGNECRHY 120

Query: 121 TQVVWKNSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           TQVVW  S R+GCAKV CNSGGTFITCNYDPPGNY  Q PY
Sbjct: 121 TQVVWSKSVRIGCAKVRCNSGGTFITCNYDPPGNYEGQWPY 160

[Close]

BLAST of Sed0019013 vs. ExPASy TrEMBL
Match: A0A0A0K7P0 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070254 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 124/165 (75.15%), Postives = 139/165 (84.24%), Query Frame = 0


Query: 1   MALL--KVSFPLLFVLITS-LMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANY 60
           MALL   +S  LLF L +S ++F SS+ QD PQ+FVDAHNAARA+VGVGP+ WDE VANY
Sbjct: 1   MALLMKMISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANY 60

Query: 61  ARQYANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGEC 120
           A+QYANQ  NDC M+HS G YGENLA SSADLSGTNAVQMWV+EKQFYDYASNSCV  EC
Sbjct: 61  AQQYANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSEC 120

Query: 121 LHYTQVVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
            HYTQVVWKNS ++GCAKV C N+GGTFITCNYDP GNYV+QRPY
Sbjct: 121 RHYTQVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of Sed0019013 vs. ExPASy TrEMBL
Match: A0A6J1I658 (pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC111471050 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.2e-60
Identity = 113/163 (69.33%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQ 60
           M L K+S  L +V+++  MF SSL QDSPQDFV+AHNAARA+VGVGPI+WDE VA++ARQ
Sbjct: 1   MDLFKLSLSLFYVVLSFAMFHSSLAQDSPQDFVNAHNAARAQVGVGPIRWDERVASFARQ 60

Query: 61  YANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGE-CLH 120
           YANQR NDC ++HSGG YGEN+A  S DLSGTNAV+MWVDEKQFY+ ++N+C  G+ C H
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSTNTCAAGKVCGH 120

Query: 121 YTQVVWKNSARVGCAKVSC-NSGGTFITCNYDPPGNYVDQRPY 162
           YTQVVW+NS R+GCAKV C N+ GTFITCNYDPPGN V QRP+
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFITCNYDPPGNVVGQRPF 163

[Close]

BLAST of Sed0019013 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 3.9e-55
Identity = 98/164 (59.76%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 1   MALLKVSFPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQ 60
           M+LLK +  +LF+L  +L F  SL +D  Q F++AHN AR EVG+ P+ WD+ VA YA  
Sbjct: 1   MSLLKTN--ILFLLAIAL-FYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAAS 60

Query: 61  YANQRANDCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSC---VGGEC 120
           YANQR NDC ++HS G +GEN+AMSS ++S  +A +MW++EKQ+YDY SN+C    GG C
Sbjct: 61  YANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTC 120

Query: 121 LHYTQVVWKNSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           LHYTQVVWKN+ R+GCAKV CNSGGTFITCNYDPPGNY+ ++P+
Sbjct: 121 LHYTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Sed0019013 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 8.2e-53
Identity = 93/137 (67.88%), Postives = 107/137 (78.10%), Query Frame = 0


Query: 26  QDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRANDCGMMHSGGSYGENLAMS 85
           QDSPQDF+  HN ARAEVGVGP++WDE VA YAR YANQR  DC M HS GSYGEN+A S
Sbjct: 27  QDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWS 86

Query: 86  SADLSGTNAVQMWVDEKQFYDYASNSCV-GGECLHYTQVVWKNSARVGCAKVSCNSGGTF 145
           S  ++G  AV MWVDE+  YDY SN+C    +C HYTQVVW+NS R+GCAKV CN+G TF
Sbjct: 87  SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTF 146

Query: 146 ITCNYDPPGNYVDQRPY 162
           ITCNYDPPGN+V + PY
Sbjct: 147 ITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Sed0019013 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 201.4 bits (511), Expect = 5.3e-52
Identity = 92/152 (60.53%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 10  LLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRANDC 69
           +L  L+ +L+ P    QDS QD+V+AHN AR+++GVGP+QWDE +A YAR YANQ   DC
Sbjct: 12  ILAALVGALVVPLK-AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDC 71

Query: 70  GMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQVVWKNSA 129
            ++HS G YGENLA S  DLSG  AV +WV+EK  Y+Y +N+C  G C HYTQVVW+NS 
Sbjct: 72  RLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSV 131

Query: 130 RVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           R+GCAKV CN+GGT I+CNYDPPGNY +Q+PY
Sbjct: 132 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Sed0019013 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 201.1 bits (510), Expect = 7.0e-52
Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 8   FPLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRAN 67
           F ++FV +   +   S  QDSPQD++  HN AR  VGVGP+QWDE VA YAR YA Q   
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 68  DCGMMHSGGSYGENLAMSSADLSGTNAVQMWVDEKQFYDYASNSCVGGECLHYTQVVWKN 127
           +C ++HSGG YGENLA  S DLSG +AV MWV EK  Y+YA+N+C  G C HYTQVVW+ 
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 128

Query: 128 SARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           S R+GCAKV CN+GGT I+CNYDP GNYV+++PY
Sbjct: 129 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Sed0019013 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.7e-43
Identity = 76/155 (49.03%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 9   PLLFVLITSLMFPSSLGQDSPQDFVDAHNAARAEVGVGPIQWDENVANYARQYANQRAND 68
           P L ++  S +  ++  Q++PQD++++HN ARA+VGV  + WD  +A YA  Y+N R  D
Sbjct: 7   PFLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKAD 66

Query: 69  CGMMHSGGSYGENLAM-SSADLSGTNAVQMWVDEKQFYDYASNSCVGG-ECLHYTQVVWK 128
           C ++HS G YGENLA  SS+  S  +AV++WVDEK +Y YA N+C GG +CLHYTQVVW+
Sbjct: 67  CNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWR 126

Query: 129 NSARVGCAKVSCNSGGTFITCNYDPPGNYVDQRPY 162
           +S ++GCA+V C +   F++CNY+ PGN+V + PY
Sbjct: 127 DSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

The following BLAST results are available for this feature:

BLAST of Sed0019013 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455066.1	4.2e-67	77.50	PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo] >KAA00313...	[more]
XP_022952869.1	6.1e-66	78.26	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_023554792.1	3.3e-64	77.02	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo] >XP_023554793.1...	[more]
XP_004136924.2	4.4e-64	75.15	pathogenesis-related protein 1 [Cucumis sativus] >KGN43831.1 hypothetical protei...	[more]
XP_022972506.1	1.9e-59	69.33	pathogenesis-related protein PR-1 type-like [Cucurbita maxima]	[more]

BLAST of Sed0019013 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	4.7e-53	62.76	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q9ZNS4	7.5e-51	60.53	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]
P33154	9.8e-51	59.74	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q08697	1.8e-49	61.81	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P07053	4.6e-48	56.60	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Sed0019013 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4Q0	2.0e-67	77.50	Basic form of pathogenesis-related protein 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BZL6	2.0e-67	77.50	basic form of pathogenesis-related protein 1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1GMZ5	2.9e-66	78.26	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145543...	[more]
A0A0A0K7P0	2.1e-64	75.15	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070254 PE=4 SV...	[more]
A0A6J1I658	9.2e-60	69.33	pathogenesis-related protein PR-1 type-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Sed0019013 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19690.1	3.9e-55	59.76	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	8.2e-53	67.88	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	5.3e-52	60.53	basic pathogenesis-related protein 1	[more]
AT2G14610.1	7.0e-52	59.74	pathogenesis-related gene 1	[more]
AT1G50060.1	2.7e-43	49.03	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 94..107 score: 45.19 coord: 117..133 score: 57.83 coord: 48..66 score: 36.01 coord: 144..157 score: 52.63
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 2..161
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..157 e-value: 4.3E-61 score: 219.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..149 e-value: 3.3E-20 score: 73.2
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 23..161 e-value: 8.6E-46 score: 157.8
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 12..161
None	No IPR available	PANTHER	PTHR10334:SF436	PATHOGENESIS-RELATED PROTEIN 1B-LIKE	coord: 2..161
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..161 e-value: 1.96271E-85 score: 244.851
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 144..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019013.1	Sed0019013.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region