Sed0018916 (gene) Chayote v1

Overview
NameSed0018916
Typegene
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S4
LocationLG13: 6717071 .. 6720414 (+)
RNA-Seq ExpressionSed0018916
SyntenySed0018916
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATTTATAGTCAATCTCTACACATTGAAATTCTATAACTTTGTTTTTGTTATTAAAGATGATTAAAAAATGAATAAAAATATGAAAATTTAACGTCATATATTACGAGATAATATATATCTATTTATTTTAATTTTTAAAATTCAAATATATTTAAATAAACATTTGATATAATAATAGTATAATTATTATAATTATATATTGATATATTAAAATAATAATATTATAGAAAATATATCAAACATAAAATAAGTAAATATATATAAATAAAAAGATGAAAAAATTTTAAATAAAAAAAAAAAAGAGGAGAGAGAAGATGAGATGAGGTGAAGAACACCTTGGACCAAACAAGGTGTTGGACTTCACACCTCACCTCATCTCACCTCCTCTTAAAACAAACACTCCCCAAAAGCTTGATTTTGTAAAAATCTTGCACCGTATTTTATAAATAACGTTTCTAAATATGAGAAATTCTTAAAAATTCAAGAAACAGAACCAGAGAAACTTCACTTTGGAGAGAAACTCCACTTTGGAGTTTCTCATTTTGAAGCCAAATTCTAGAAATGTTTCTTTAAAATTTTGAGAACAAGAAATAGGAATGATTACCAAACAAGTCTGTTTCTAAAAAAAAAGAAACAGAAACAAGAAACATGAACGTTACCAAACCGATCTTAAATTGCTCCAATTGCAGAATGTTTTTTTTTACACTCTCAACTCCTTCAAATTTATGGGAAATAAACCAGCGGTTGGATTAATGAGATAATCTGGATTGAAATAAACCATATAAACCGATTGGAACCGATCTATATAAGCAGTCATAAGAAAACCCTAAATCTTTTCGATCGAAGCAGCGCCGTTGTTTCCGCCTTATTTGCTCTTCCAGAACCCCAAACACCATTTGCAACTTCCGGCCACAAGCTCCCTTACCATGGTCAGTGATTGCTTCTAAGAATCCTAATTTTTTTTTTTTTTTTTTTTCATGTGTTCGTTCTCATTATTTGTTGAAAAGTTCAATGCAGATTCCGATTGTATCAGTATTTGCAATGTTTTGATAAGCTCGAGATTTGAATATGCTATTCTTAATTTGTTCCGAGAAATTTTATTGAATTCTTTGAGAATTTATGTATCTAAACAATGGCACTTTTGAGCTCTGAACTGCGAAATTGTACCTCCATAGTGTTGGTCACTAGCTAAGTTTCGATTTATTTTTGTTCATTTCTTTTTTCAAATCGAAAGAACAAAATTTTCCAGTCCTTCCAACATTTTGTAACCCCTAAAGGATTTTATTACTCGACATTTTCTTCAATATGTTCATAAAAAGGTATTCTTGGTTTTGGCCTATGCTATCTGGATCTATGTTTGCTTTCTTGTGTGTTGCATTTTGGTTTTTGGAATATTTAATATTGGATTTAATGGCTGTGTCTATTACAGGCTCGGGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGTGAGTCAAATTTATAGTTTTAAGTTCTGTTTACATTTTAGAGGAGTTCAACACTGAACTTTTTTTCATGTATATTGGATTTTTTTGTAGGCTCCCAAACCTTCCTCTGGACCACATAAATCAAGGGAATGCCTCCCGTTGATCCTTATTCTCCGAAACCGATTGAAGTATGCTCTCACATATCGTGAGGTGATTGCGATCTTAATGCAAAGACATGTTCTTGTAGATGGGAAAGTGAGAACTGACAAGACATACCCGGCTGGGTTTATGGGTATACCCTTTTTTTCTTTCTTTAATTTTAATTTTATTCTAATAATTGAATGAAAAGGCCATTCTTTTTTTTTGCTGAATTTTATTTTAGGCATTGCTTTCCTAGACAAATTGTAATGTATCATCATCTGTATGTGAATGAATGAGACAGATTATCTTTCTGTGAGAAATCTGATTTGAAGTGAATGGGTAATGGAGCATGTACTAAAGTGTCAGGTTTATGAATGAATTTATTTTTTGGGTGTGACCGCAATCTGTTATATTCTAGTTTCATATGGAATTATTCTTATAACTATTAAATAGCAACAGTTGTCTATTGGTCAAAAGAGCCGTGTAGAACTAAGAGGTTATGTGTTTGATCTATGATAGACACCTACTAAGAATTAATTTCTTATGAGTTTCATTGACAACAAAATGTTGTAAGGTTAGATGGTTGTCTCATAAGAATAGCCAATGTGGGTAAGCTGGATACTCATGAACATAACTAATGCATATTCTAGATTATTTGAGTAGAATTAGCCCCTTTCCTATTTAGATTATCTAGAACGTGCCCAAATTTCTTTTTGTGGAGTAAAATATGTAGATGTGAACAATAATTATGGAGATAGCTTTATTCATATTTCATCATAATTTTGCTTTGGAGATTTTGAGGAAGATAGTCCATAAATATGTACCTTATCATATAATCTGATGGTTAAATTTTAGATGTCCCTGTAGATTAGGTATCTATTGGAAAAGTGCCTATTGGTTGCATTCGTTTGTTTTATACTGTTATTATTTTATGTCCTCGGTAAACACGACACTTTGTTTATCCTTGTACTCTTGTAGATGTTGTATCAATCCCCAAAACGAATGAGAATTTCCGGCTTCTTTATGACACCAAAGGTCGATTCCGTCTTCACTCTGTGAGGGATGAGGAATCTAAGGTGAGTTACTTATTCTTTTTGGTATCAAATTTGATTTTCTATTTTTTTTTTTTCATAAATGTATTTCTGTCTTCTACCCTTTCCTCCTTACCTGTTAGAGTGAGTAGATATCCTTTTCAGCGACTGATAGTCTTACTATTATTGTAATTTGTCCATTTAAATATTGGATGATTTACATTGATTTACATGTACCTTATACAGTACAAACTCTGCAAAGTCCGCTCTGTGCAATTTGGGCAGAAGGGCATTCCATATCTGAACACCTACGATGGCCGTACTATTCGGTACCCTGATCCTCTCATCAAGGCCAATGACACAATCAAACTCGATCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGTAATGTAGTCATGGTTACAGGTGGAAGGAATCGTGGAAGAGTTGGCGTAATTAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAGACCATCCACATTCAGGATTCCACTGGCCATGAATTCGCCACTCGTCTCGGCAACGTCTTTACCATTGGTAAGGGTACCAAGCCATGGGTATCCCTTCCTAAGGGCAAGGGTATTAAATTATCCATCATTGAGGAGGCCAGGAAGAGGCTTGCGAGTCAGACAGCAGTTTCCGCGTAG

mRNA sequence

ATGATATTTATAGTCAATCTCTACACATTGAAATTCTATAACTTTGTTTTTGCTCGGGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCTCCCAAACCTTCCTCTGGACCACATAAATCAAGGGAATGCCTCCCGTTGATCCTTATTCTCCGAAACCGATTGAAGTATGCTCTCACATATCGTGAGGTGATTGCGATCTTAATGCAAAGACATGTTCTTGTAGATGGGAAAGTGAGAACTGACAAGACATACCCGGCTGGGTTTATGGATGTTGTATCAATCCCCAAAACGAATGAGAATTTCCGGCTTCTTTATGACACCAAAGGTCGATTCCGTCTTCACTCTGTGAGGGATGAGGAATCTAAGTACAAACTCTGCAAAGTCCGCTCTGTGCAATTTGGGCAGAAGGGCATTCCATATCTGAACACCTACGATGGCCGTACTATTCGGTACCCTGATCCTCTCATCAAGGCCAATGACACAATCAAACTCGATCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGTAATGTAGTCATGGTTACAGGTGGAAGGAATCGTGGAAGAGTTGGCGTAATTAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAGACCATCCACATTCAGGATTCCACTGGCCATGAATTCGCCACTCGTCTCGGCAACGTCTTTACCATTGGTAAGGGTACCAAGCCATGGGTATCCCTTCCTAAGGGCAAGGGTATTAAATTATCCATCATTGAGGAGGCCAGGAAGAGGCTTGCGAGTCAGACAGCAGTTTCCGCGTAG

Coding sequence (CDS)

ATGATATTTATAGTCAATCTCTACACATTGAAATTCTATAACTTTGTTTTTGCTCGGGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCTCCCAAACCTTCCTCTGGACCACATAAATCAAGGGAATGCCTCCCGTTGATCCTTATTCTCCGAAACCGATTGAAGTATGCTCTCACATATCGTGAGGTGATTGCGATCTTAATGCAAAGACATGTTCTTGTAGATGGGAAAGTGAGAACTGACAAGACATACCCGGCTGGGTTTATGGATGTTGTATCAATCCCCAAAACGAATGAGAATTTCCGGCTTCTTTATGACACCAAAGGTCGATTCCGTCTTCACTCTGTGAGGGATGAGGAATCTAAGTACAAACTCTGCAAAGTCCGCTCTGTGCAATTTGGGCAGAAGGGCATTCCATATCTGAACACCTACGATGGCCGTACTATTCGGTACCCTGATCCTCTCATCAAGGCCAATGACACAATCAAACTCGATCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGTAATGTAGTCATGGTTACAGGTGGAAGGAATCGTGGAAGAGTTGGCGTAATTAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAGACCATCCACATTCAGGATTCCACTGGCCATGAATTCGCCACTCGTCTCGGCAACGTCTTTACCATTGGTAAGGGTACCAAGCCATGGGTATCCCTTCCTAAGGGCAAGGGTATTAAATTATCCATCATTGAGGAGGCCAGGAAGAGGCTTGCGAGTCAGACAGCAGTTTCCGCGTAG

Protein sequence

MIFIVNLYTLKFYNFVFARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQTAVSA
Homology
[Close]
BLAST of Sed0018916 vs. NCBI nr
Match: XP_022132117.1 (40S ribosomal protein S4-3 [Momordica charantia])

HSP 1 Score: 527.3 bits (1357), Expect = 7.9e-146
Identity = 259/263 (98.48%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQ AV+A
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. NCBI nr
Match: XP_038899765.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 525.8 bits (1353), Expect = 2.3e-145
Identity = 258/263 (98.10%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQ AV+A
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. NCBI nr
Match: XP_022146851.1 (40S ribosomal protein S4-3-like [Momordica charantia])

HSP 1 Score: 524.6 bits (1350), Expect = 5.1e-145
Identity = 257/263 (97.72%), Postives = 261/263 (99.24%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KG+KLSIIEEARKRLASQ AV+A
Sbjct: 242 KGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. NCBI nr
Match: XP_038900121.1 (40S ribosomal protein S4-3 [Benincasa hispida])

HSP 1 Score: 524.2 bits (1349), Expect = 6.7e-145
Identity = 257/263 (97.72%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQ AV+A
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. NCBI nr
Match: XP_022996364.1 (40S ribosomal protein S4-3-like [Cucurbita maxima] >KAG6599974.1 40S ribosomal protein S4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030653.1 40S ribosomal protein S4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 256/263 (97.34%), Postives = 261/263 (99.24%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEESK+
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIH+QD+TGHEFATRL NVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQTA +A
Sbjct: 242 KGIKLSIIEEARKRLASQTAATA 264

[Close]
BLAST of Sed0018916 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 8.5e-143
Identity = 244/263 (92.78%), Postives = 258/263 (98.10%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEESK+
Sbjct: 62  ISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFET+HIQDS GHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 242 KGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of Sed0018916 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 506.5 bits (1303), Expect = 1.9e-142
Identity = 242/260 (93.08%), Postives = 256/260 (98.46%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Sed0018916 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 506.1 bits (1302), Expect = 2.5e-142
Identity = 242/260 (93.08%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Sed0018916 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.2e-141
Identity = 240/260 (92.31%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKL+IIEEARKRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Sed0018916 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.2e-140
Identity = 241/260 (92.69%), Postives = 253/260 (97.31%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH++  +E+K+
Sbjct: 62  IAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIH+QD+ GHEFATRLGNVFTIGKGTKPWVSLPK 
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKR 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKLSIIEEARKRLA+Q A
Sbjct: 242 KGIKLSIIEEARKRLAAQNA 261

[Close]
BLAST of Sed0018916 vs. ExPASy TrEMBL
Match: A0A6J1BSY6 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146
Identity = 259/263 (98.48%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQ AV+A
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. ExPASy TrEMBL
Match: A0A6J1D0L7 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145
Identity = 257/263 (97.72%), Postives = 261/263 (99.24%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KG+KLSIIEEARKRLASQ AV+A
Sbjct: 242 KGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. ExPASy TrEMBL
Match: A0A6J1K8I3 (40S ribosomal protein S4 OS=Cucurbita maxima OX=3661 GN=LOC111491616 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.2e-145
Identity = 256/263 (97.34%), Postives = 261/263 (99.24%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEESK+
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIH+QD+TGHEFATRL NVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLCNVFTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQTA +A
Sbjct: 242 KGIKLSIIEEARKRLASQTAATA 264

[Close]
BLAST of Sed0018916 vs. ExPASy TrEMBL
Match: A0A5A7V1R9 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00160 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 256/263 (97.34%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQ AV+A
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]
BLAST of Sed0018916 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.6e-144
Identity = 255/263 (96.96%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEE+KY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTAVSA 281
           KGIKLSIIEEARKRLASQ AV+A
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Sed0018916 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-143
Identity = 242/260 (93.08%), Postives = 256/260 (98.46%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Sed0018916 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-143
Identity = 242/260 (93.08%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Sed0018916 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 503.8 bits (1296), Expect = 8.7e-143
Identity = 240/260 (92.31%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 198 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKG 257
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 258 KGIKLSIIEEARKRLASQTA 278
           KGIKL+IIEEARKRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Sed0018916 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 468.8 bits (1205), Expect = 3.1e-132
Identity = 225/243 (92.59%), Postives = 238/243 (97.94%), Query Frame = 0 

Query: 35  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 94
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 95  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKYKLCKVRSVQFGQKGIPY 154
           DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+KLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 155 LNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 214
           LNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 215 EKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAS 274
           EKHKGSFETIHIQDSTGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 275 QTA 278
           Q A
Sbjct: 241 QQA 243

[Close]
BLAST of Sed0018916 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 348.6 bits (893), Expect = 4.7e-96
Identity = 163/180 (90.56%), Postives = 174/180 (96.67%), Query Frame = 0 

Query: 18  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 77
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 78  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKY 137
           I+ILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE+K+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 138 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 197
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181

The following BLAST results are available for this feature:
BLAST of Sed0018916 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132117.17.9e-14698.4840S ribosomal protein S4-3 [Momordica charantia][more]
XP_038899765.12.3e-14598.1040S ribosomal protein S4-3-like [Benincasa hispida][more]
XP_022146851.15.1e-14597.7240S ribosomal protein S4-3-like [Momordica charantia][more]
XP_038900121.16.7e-14597.7240S ribosomal protein S4-3 [Benincasa hispida][more]
XP_022996364.11.5e-14497.3440S ribosomal protein S4-3-like [Cucurbita maxima] >KAG6599974.1 40S ribosomal p... [more]
BLAST of Sed0018916 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P463008.5e-14392.7840S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1[more]
Q8VYK61.9e-14293.0840S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2[more]
P492042.5e-14293.0840S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4[more]
Q93VH91.2e-14192.3140S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1[more]
P462995.2e-14092.6940S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1[more]
BLAST of Sed0018916 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BSY63.8e-14698.4840S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=... [more]
A0A6J1D0L72.5e-14597.7240S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=... [more]
A0A6J1K8I37.2e-14597.3440S ribosomal protein S4 OS=Cucurbita maxima OX=3661 GN=LOC111491616 PE=3 SV=1[more]
A0A5A7V1R91.2e-14497.3440S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0K4K71.6e-14496.9640S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1[more]
BLAST of Sed0018916 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58420.11.3e-14393.08Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.11.8e-14393.08Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.18.7e-14392.31Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.23.1e-13292.59Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.24.7e-9690.56Ribosomal protein S4 (RPS4A) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 58..122
e-value: 2.9E-5
score: 33.5
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 63..106
e-value: 3.8E-7
score: 29.7
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 67..128
e-value: 5.06435E-6
score: 41.4662
IPR005824KOWSMARTSM00739kow_9coord: 190..217
e-value: 7.7E-4
score: 28.8
IPR005824KOWPFAMPF00467KOWcoord: 193..226
e-value: 1.5E-6
score: 27.9
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 191..261
e-value: 3.3E-39
score: 134.6
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 17..257
e-value: 3.2E-97
score: 322.4
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 237..280
coord: 17..236
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 23..254
score: 36.349121
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 228..274
e-value: 9.5E-26
score: 89.2
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 111..185
e-value: 7.1E-35
score: 118.7
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 17..133
e-value: 7.7E-61
score: 205.2
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 138..188
e-value: 1.2E-30
score: 107.0
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 19..55
e-value: 4.5E-19
score: 68.3
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 237..280
coord: 17..236
NoneNo IPR availablePROSITEPS50889S4coord: 58..120
score: 9.171491
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 24..38
IPR041982Ribosomal protein S4, KOW domainCDDcd06087KOW_RPS4coord: 191..245
e-value: 4.93099E-30
score: 105.675

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018916.1Sed0018916.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding