Sed0018908 (gene) Chayote v1

Overview


Name	Sed0018908
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor HEC2-like
Location	LG10: 26677131 .. 26678650 (-)
RNA-Seq Expression	Sed0018908
Synteny	Sed0018908

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTCACGAGCATGTAAAGTCTGGGGATCAGATGGATTTTCTGACTGTGATTCACCAAATGGGAAAATTTCCTGAGTTTCTTGAATTTACCGAAATGCCACCCACCGCTTTTGCTTTTGCTTCTTCCATCCAAACCCCAAATCCCACCTTTCCTTCTTTCAATAACGCCGCCGACCCTCTTCCACCGCCATGTTTTCTGCCGTATTCCGCCTCTCCACGGTGGAGAACCCATCTTGCCTACACCGGAACTGCCGCCAACTCGGTATCATACTCTTAGCTATTCACTATACTATACTAACGGCCCCGGCCTACTCATTAGTCACTACAAATTTTGCTACCGATTATCGTCAAAATTTTAACTTTTATTATTGTTTCCAATTTCTTGAATTATGTTGTCCCATGATTACTTATAGTCGGTTGTCATTTTTCGATTTCTTAATTATTGATTCCAATTTTCATAATATTATACTTTTCTGTTTCTTCGTTGAAAAAAAGTTGACGGGAGATTTCTACTAGATTGACATTGTTCTTTATCTCACTCATTAATTTGATAGGTTCACTGAAAATTAATGATAGGCTTAAAGGGTAGTTACATTTGACCTTAAAAGATTTATGTAGTTGGGATTAGAAACTTTAATCTTTTAATAGAAATTAATTATATATATCATTTCAAGTAGTTACATTTGTATATTTTTTTTAGAGTTCATGATTTGATTTGAACTCACCTATAAGATCATGAACACACTAAGTGTGAGTAGAAAATTTAGTTTGAATTAGTAATATCATCAAATTTATAAGTATACCAAACTAATACTTTTTGATAATAAAAAAAAAAGGCATACAAATATCAGTTTGACATTTTAAACTATATAACGATCTTAAAAATCTTAAATTTCAAACAACCAAGTCTAAAAAGTCCAAATGGAATATTTTTACCTTCTTTTTGCTATAAAGTTTAATGACCGTGTATAAAAAGATACACACCCATAAGCAATAAAGTTTATGTTTGAAATAGTGAACGGTCAATGGCGCAATTGTTTTATTATTTAATTGTAAATTAATTAAACACTAGTATTATAGGTTGGATCTCGAGAATTGATATTTGTGTCTGTACTCAAAAAAAAAAATCTACTTATATATTGTTCAAATCAAAATGATGGATTGAGATTATGTATGATGTATTATTTTGAGAAGGAAAATTCAATGGCGGCGATGAGGGAAATGATGTACCAGATAGCGGCAATGCAGCCGATCCACATAGACCCAGAATCGGTGAAGCCACCGAAACGGCGGAACGTGAAGATCTCAAAAGACCCACAAAGCATAGCGGCTCGGCATCGACGAGAGAGAATCAGCCAAAAAATTAGAATTCTTCGAAGAATAGTTCCCGGCGGCACCAAAATGGACACCGCCTCCATGTTGGACGAAGCCATTCATTACGTCAAGTTCTTGAAAAACCAACTCCACTCTCTCCAACACACCGCCGCCGCGGCCGGCCGGCGGGAGCAATCGTAA

mRNA sequence

ATGGATATTCACGAGCATGTAAAGTCTGGGGATCAGATGGATTTTCTGACTGTGATTCACCAAATGGGAAAATTTCCTGAGTTTCTTGAATTTACCGAAATGCCACCCACCGCTTTTGCTTTTGCTTCTTCCATCCAAACCCCAAATCCCACCTTTCCTTCTTTCAATAACGCCGCCGACCCTCTTCCACCGCCATGTTTTCTGCCGTATTCCGCCTCTCCACGGTGGAGAACCCATCTTGCCTACACCGGAACTGCCGCCAACTCGAAGGAAAATTCAATGGCGGCGATGAGGGAAATGATGTACCAGATAGCGGCAATGCAGCCGATCCACATAGACCCAGAATCGGTGAAGCCACCGAAACGGCGGAACGTGAAGATCTCAAAAGACCCACAAAGCATAGCGGCTCGGCATCGACGAGAGAGAATCAGCCAAAAAATTAGAATTCTTCGAAGAATAGTTCCCGGCGGCACCAAAATGGACACCGCCTCCATGTTGGACGAAGCCATTCATTACGTCAAGTTCTTGAAAAACCAACTCCACTCTCTCCAACACACCGCCGCCGCGGCCGGCCGGCGGGAGCAATCGTAA

Coding sequence (CDS)

ATGGATATTCACGAGCATGTAAAGTCTGGGGATCAGATGGATTTTCTGACTGTGATTCACCAAATGGGAAAATTTCCTGAGTTTCTTGAATTTACCGAAATGCCACCCACCGCTTTTGCTTTTGCTTCTTCCATCCAAACCCCAAATCCCACCTTTCCTTCTTTCAATAACGCCGCCGACCCTCTTCCACCGCCATGTTTTCTGCCGTATTCCGCCTCTCCACGGTGGAGAACCCATCTTGCCTACACCGGAACTGCCGCCAACTCGAAGGAAAATTCAATGGCGGCGATGAGGGAAATGATGTACCAGATAGCGGCAATGCAGCCGATCCACATAGACCCAGAATCGGTGAAGCCACCGAAACGGCGGAACGTGAAGATCTCAAAAGACCCACAAAGCATAGCGGCTCGGCATCGACGAGAGAGAATCAGCCAAAAAATTAGAATTCTTCGAAGAATAGTTCCCGGCGGCACCAAAATGGACACCGCCTCCATGTTGGACGAAGCCATTCATTACGTCAAGTTCTTGAAAAACCAACTCCACTCTCTCCAACACACCGCCGCCGCGGCCGGCCGGCGGGAGCAATCGTAA

Protein sequence

MDIHEHVKSGDQMDFLTVIHQMGKFPEFLEFTEMPPTAFAFASSIQTPNPTFPSFNNAADPLPPPCFLPYSASPRWRTHLAYTGTAANSKENSMAAMREMMYQIAAMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKNQLHSLQHTAAAAGRREQS

Homology

[Close]

BLAST of Sed0018908 vs. NCBI nr
Match: XP_022996919.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-47
Identity = 110/188 (58.51%), Postives = 133/188 (70.74%), Query Frame = 0


Query: 16  LTVIHQMGKFPEFLEFTEMPPTAFAFASS--------IQTPNPTFPSF--------NNAA 75
           + V+ QM  F E+ EFT++P + F+F SS         Q P P  PS+        NNA 
Sbjct: 1   MDVLTQMENFSEYFEFTKLPASPFSFGSSNIGATSIRFQNPTPILPSYALSSTASMNNAT 60

Query: 76  DPLPPPCFLPYSASPRWRTHLAYTGTAANSKENSMAAMREMMYQIAAMQPIHIDPESVKP 135
            PL PPC  P+S++    +H          +++SM AMREM+Y+IAAMQPI IDPE+VKP
Sbjct: 61  HPLAPPCLPPHSSAATPNSH-------TKQQQDSMGAMREMIYRIAAMQPIQIDPEAVKP 120

Query: 136 PKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKNQ 188
           PKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHYVKFLKNQ
Sbjct: 121 PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKNQ 180

[Close]

BLAST of Sed0018908 vs. NCBI nr
Match: XP_008444609.1 (PREDICTED: transcription factor HEC3-like [Cucumis melo])

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-47
Identity = 115/194 (59.28%), Postives = 135/194 (69.59%), Query Frame = 0


Query: 19  IHQMGKFPEFLEFTEMPPTA-FAFASS--IQTPNPTFPSF----------NNAADPLPPP 78
           I +MGKF E  E+ E+  T  F F SS    T +  FPSF          NNA  P+ PP
Sbjct: 3   IEEMGKFGENFEYNEIATTLDFGFGSSNIASTSHLIFPSFNNIPPTTLSMNNATHPVAPP 62

Query: 79  CFLPYSASPRWRTHLAYTGTAANSKENSM---------AAMREMMYQIAAMQPIHIDPES 138
            F PYSA+ RWR+H   T  +  + E  +           MREM+Y+IAAMQPI IDPE+
Sbjct: 63  SFPPYSAAARWRSHFPATRNSGTTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEA 122

Query: 139 VKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFL 191
           VK PKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHY+KFL
Sbjct: 123 VKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFL 182

[Close]

BLAST of Sed0018908 vs. NCBI nr
Match: XP_038886669.1 (transcription factor HEC2-like [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-46
Identity = 116/198 (58.59%), Postives = 137/198 (69.19%), Query Frame = 0


Query: 16  LTVIHQMGKF--PEFLEFTEMPPTAFAF-------ASSIQTPNPTFPSF----------- 75
           + +   MG+F   E LE +E+   AFAF       +SS  T  P F SF           
Sbjct: 1   MNIEDDMGEFAVAENLELSEVGGLAFAFGSSNIGVSSSTSTSYPIFSSFNNLPPPSTFSM 60

Query: 76  NNAADPLPPPCFLPYSASPRW-RTHLAYTGTAA----NSKENSMAAMREMMYQIAAMQPI 135
           NN   P+ PP F PYS++PRW  +HL  T  +A      +  SM  MREM+Y++AAMQPI
Sbjct: 61  NNPTQPVAPPSFPPYSSAPRWTSSHLPATPISAMKGEEEESESMGGMREMIYRMAAMQPI 120

Query: 136 HIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAI 189
            IDPE+VKPPKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAI
Sbjct: 121 EIDPETVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 180

[Close]

BLAST of Sed0018908 vs. NCBI nr
Match: XP_011650182.1 (transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein Csa_018561 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-46
Identity = 115/200 (57.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 19  IHQMGKFPEFLEFTEMPPTA-FAFASS--IQTPNPTFPSF----------NNAADPLPPP 78
           I +MGKF E  E  E+  +  F F SS    T +P FPSF          NNA   + PP
Sbjct: 3   IEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPP 62

Query: 79  CFLPYSASPRWRTHLAYTGTA---------ANSKENSMAAMREMMYQIAAMQPIHIDPES 138
            F PYSA+ RWR+H   T  +          +  E+    MREM+Y+IAAMQPI IDPE+
Sbjct: 63  SFPPYSAAARWRSHFPATRNSRMAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEA 122

Query: 139 VKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFL 197
           VK PKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHY+KFL
Sbjct: 123 VKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFL 182

[Close]

BLAST of Sed0018908 vs. NCBI nr
Match: KAG7029335.1 (Transcription factor HEC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-46
Identity = 111/189 (58.73%), Postives = 132/189 (69.84%), Query Frame = 0


Query: 16  LTVIHQMGKFPEFLEFTEMPPTAFAFASS--------IQTPNP---------TFPSFNNA 75
           + V+ QM  F EF EFTE+P + F+F SS         Q P P         +  S NNA
Sbjct: 1   MDVLTQMENFSEFFEFTELPSSPFSFGSSNIGATSHRFQNPTPPILPSYALSSTASMNNA 60

Query: 76  ADPLPPPCFLPYSASPRWRTHLAYTGTAANSKENSMAAMREMMYQIAAMQPIHIDPESVK 135
             PL PPC  P+S +    +H          +++SM AMREM+Y+IAAMQPI IDPE+VK
Sbjct: 61  THPLAPPCPPPHSPAATPNSH-------TKQQQDSMGAMREMIYRIAAMQPIQIDPEAVK 120

Query: 136 PPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKN 188
           PPKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHYVKFLK+
Sbjct: 121 PPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKS 180

[Close]

BLAST of Sed0018908 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38
Identity = 100/192 (52.08%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 18  VIHQMGKFPEFLEFTEMPPTAFAFASSIQTPNPTFPSFNNAA------DPLPPPCFL--- 77
           ++HQM K PEF       P +  F+      N T+P   N+            P F    
Sbjct: 9   MMHQMEKLPEFCN-----PNSSFFSPD---HNNTYPFLFNSTHYQSDHSMTNEPGFRYGS 68

Query: 78  -----PYSASPRWRTHLAYTGTAANSKEN----SMAAMREMMYQIAAMQPIHIDPESVKP 137
                P S SP       +     NS  N    +MAAMREM+++IA MQPIHIDPE+VKP
Sbjct: 69  GLLTNPSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKP 128

Query: 138 PKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKNQ 192
           PKRRNV+ISKDPQS+AARHRRERIS++IRIL+R+VPGGTKMDTASMLDEAIHYVKFLK Q
Sbjct: 129 PKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQ 188

[Close]

BLAST of Sed0018908 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.6e-37
Identity = 100/193 (51.81%), Postives = 122/193 (63.21%), Query Frame = 0


Query: 11  DQMDFL--TVIHQMGKFPEFLEFTEMPPTAFAFASSIQTPNPTFP-SFNNAADPLP---- 70
           D  D L   ++ QM K PE   F+   P        + + + T P  FN     LP    
Sbjct: 2   DNSDILMNMMMQQMEKLPE--HFSNSNPNPNPHNIMMLSESNTHPFFFNPTHSHLPFDQT 61

Query: 71  -----PPCFLPYSASPRWRTHLAYTGTAANSKENSMAAMREMMYQIAAMQPIHIDPESVK 130
                P     Y+ SP         G + N+   +MAAMREM+++IA MQPIHIDPESVK
Sbjct: 62  MPHHQPGLNFRYAPSPSSSLPEKRGGCSDNA---NMAAMREMIFRIAVMQPIHIDPESVK 121

Query: 131 PPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKN 190
           PPKR+NV+ISKDPQS+AARHRRERIS++IRIL+R+VPGGTKMDTASMLDEAIHYVKFLK 
Sbjct: 122 PPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKK 181

Query: 191 QLHSLQHTAAAAG 192
           Q+ SL+  A   G
Sbjct: 182 QVQSLEEHAVVNG 189

[Close]

BLAST of Sed0018908 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-31
Identity = 76/130 (58.46%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 67  FLPYSAS--PRWRTHLAYTGTAANSKEN---------SMAAMREMMYQIAAMQPIHIDPE 126
           F P+S+S  P   + L  T   +  +E+          + AM+EMMY+IAAMQ + IDP 
Sbjct: 54  FNPFSSSHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPA 113

Query: 127 SVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKF 186
           +VK PKRRNV+IS DPQS+AARHRRERIS++IRIL+R+VPGGTKMDTASMLDEAI YVKF
Sbjct: 114 TVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKF 173

[Close]

BLAST of Sed0018908 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-28
Identity = 64/94 (68.09%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 91  ENSMAAMREMMYQIAAMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRIL 150
           +  M AM+EM Y IA MQP+ IDP +V  P RRNV+IS DPQ++ AR RRERIS+KIRIL
Sbjct: 82  DEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRIL 141

Query: 151 RRIVPGGTKMDTASMLDEAIHYVKFLKNQLHSLQ 185
           +RIVPGG KMDTASMLDEAI Y KFLK Q+  LQ
Sbjct: 142 KRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of Sed0018908 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.6e-25
Identity = 56/93 (60.22%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 93  SMAAMREMMYQIAAMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRR 152
           ++A M+EM+Y+ AA +P++   E V+ PKR+NVKIS DPQ++AAR RRERIS+KIR+L+ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 153 IVPGGTKMDTASMLDEAIHYVKFLKNQLHSLQH 186
           +VPGGTKMDTASMLDEA +Y+KFL+ Q+ +L++
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALEN 333

[Close]

BLAST of Sed0018908 vs. ExPASy TrEMBL
Match: A0A6J1KA10 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.8e-48
Identity = 110/188 (58.51%), Postives = 133/188 (70.74%), Query Frame = 0


Query: 16  LTVIHQMGKFPEFLEFTEMPPTAFAFASS--------IQTPNPTFPSF--------NNAA 75
           + V+ QM  F E+ EFT++P + F+F SS         Q P P  PS+        NNA 
Sbjct: 1   MDVLTQMENFSEYFEFTKLPASPFSFGSSNIGATSIRFQNPTPILPSYALSSTASMNNAT 60

Query: 76  DPLPPPCFLPYSASPRWRTHLAYTGTAANSKENSMAAMREMMYQIAAMQPIHIDPESVKP 135
            PL PPC  P+S++    +H          +++SM AMREM+Y+IAAMQPI IDPE+VKP
Sbjct: 61  HPLAPPCLPPHSSAATPNSH-------TKQQQDSMGAMREMIYRIAAMQPIQIDPEAVKP 120

Query: 136 PKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKNQ 188
           PKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHYVKFLKNQ
Sbjct: 121 PKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKNQ 180

[Close]

BLAST of Sed0018908 vs. ExPASy TrEMBL
Match: A0A1S3BA85 (transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.5e-48
Identity = 115/194 (59.28%), Postives = 135/194 (69.59%), Query Frame = 0


Query: 19  IHQMGKFPEFLEFTEMPPTA-FAFASS--IQTPNPTFPSF----------NNAADPLPPP 78
           I +MGKF E  E+ E+  T  F F SS    T +  FPSF          NNA  P+ PP
Sbjct: 3   IEEMGKFGENFEYNEIATTLDFGFGSSNIASTSHLIFPSFNNIPPTTLSMNNATHPVAPP 62

Query: 79  CFLPYSASPRWRTHLAYTGTAANSKENSM---------AAMREMMYQIAAMQPIHIDPES 138
            F PYSA+ RWR+H   T  +  + E  +           MREM+Y+IAAMQPI IDPE+
Sbjct: 63  SFPPYSAAARWRSHFPATRNSGTTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEA 122

Query: 139 VKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFL 191
           VK PKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHY+KFL
Sbjct: 123 VKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFL 182

[Close]

BLAST of Sed0018908 vs. ExPASy TrEMBL
Match: A0A0A0LRA8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 115/201 (57.21%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 19  IHQMGKFPEFLEFTEMPPTA-FAFASS--IQTPNPTFPSF----------NNAADPLPPP 78
           I +MGKF E  E  E+  +  F F SS    T +P FPSF          NNA   + PP
Sbjct: 3   IEEMGKFGENFECNEIATSLDFGFGSSNITSTSHPIFPSFNNIPPTTLSMNNATHAVAPP 62

Query: 79  CFLPYSASPRWRTHLAYTGTA----------ANSKENSMAAMREMMYQIAAMQPIHIDPE 138
            F PYSA+ RWR+H   T  +           +  E+    MREM+Y+IAAMQPI IDPE
Sbjct: 63  SFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPE 122

Query: 139 SVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKF 197
           +VK PKRRNVKISKDPQS+AARHRRERIS++IRIL+RIVPGGTKMDTASMLDEAIHY+KF
Sbjct: 123 AVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKF 182

[Close]

BLAST of Sed0018908 vs. ExPASy TrEMBL
Match: A0A438DYH6 (Transcription factor HEC1 OS=Vitis vinifera OX=29760 GN=HEC1_1 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.0e-45
Identity = 117/203 (57.64%), Postives = 134/203 (66.01%), Query Frame = 0


Query: 11  DQMDFLTVIHQMGKFPEFL----EFTEMPPTAFAFASSIQTP---------NPTF----- 70
           DQM+ + +  QM K PEF     E  E+P   F+   S   P         +PTF     
Sbjct: 12  DQMEMMMM--QMDKLPEFCGTYNEMAELPSMGFSGGGSATMPQIFDNPHVASPTFINSPS 71

Query: 71  -PSFNNAADPLPP--PCFLPYSASPRWRTHLAYTGTAANS----KENSMAAMREMMYQIA 130
             SFN    P  P  P FL  SA  RWR     +G    S    K NSMAAMREM+++IA
Sbjct: 72  TISFNGTTPPQEPTAPAFLTNSAVARWRGTGELSGVCNLSTPAQKRNSMAAMREMIFRIA 131

Query: 131 AMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASM 189
           AMQP+HIDPESVKPPKRRNVKISKDPQS+AARHRRERIS+KIRIL+R+VPGGTKMDTASM
Sbjct: 132 AMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASM 191

[Close]

BLAST of Sed0018908 vs. ExPASy TrEMBL
Match: E0CPU4 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g10400 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.0e-45
Identity = 117/203 (57.64%), Postives = 134/203 (66.01%), Query Frame = 0


Query: 11  DQMDFLTVIHQMGKFPEFL----EFTEMPPTAFAFASSIQTP---------NPTF----- 70
           DQM+ + +  QM K PEF     E  E+P   F+   S   P         +PTF     
Sbjct: 12  DQMEMMMM--QMDKLPEFCGTYNEMAELPSMGFSGGGSATMPQIFDNPHVASPTFINSPS 71

Query: 71  -PSFNNAADPLPP--PCFLPYSASPRWRTHLAYTGTAANS----KENSMAAMREMMYQIA 130
             SFN    P  P  P FL  SA  RWR     +G    S    K NSMAAMREM+++IA
Sbjct: 72  TISFNGTTPPQEPTAPAFLTNSAVARWRGTGELSGVCNLSTPAQKRNSMAAMREMIFRIA 131

Query: 131 AMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASM 189
           AMQP+HIDPESVKPPKRRNVKISKDPQS+AARHRRERIS+KIRIL+R+VPGGTKMDTASM
Sbjct: 132 AMQPVHIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASM 191

[Close]

BLAST of Sed0018908 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 7.4e-40
Identity = 100/192 (52.08%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 18  VIHQMGKFPEFLEFTEMPPTAFAFASSIQTPNPTFPSFNNAA------DPLPPPCFL--- 77
           ++HQM K PEF       P +  F+      N T+P   N+            P F    
Sbjct: 9   MMHQMEKLPEFCN-----PNSSFFSPD---HNNTYPFLFNSTHYQSDHSMTNEPGFRYGS 68

Query: 78  -----PYSASPRWRTHLAYTGTAANSKEN----SMAAMREMMYQIAAMQPIHIDPESVKP 137
                P S SP       +     NS  N    +MAAMREM+++IA MQPIHIDPE+VKP
Sbjct: 69  GLLTNPSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKP 128

Query: 138 PKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKNQ 192
           PKRRNV+ISKDPQS+AARHRRERIS++IRIL+R+VPGGTKMDTASMLDEAIHYVKFLK Q
Sbjct: 129 PKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQ 188

[Close]

BLAST of Sed0018908 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-38
Identity = 100/193 (51.81%), Postives = 122/193 (63.21%), Query Frame = 0


Query: 11  DQMDFL--TVIHQMGKFPEFLEFTEMPPTAFAFASSIQTPNPTFP-SFNNAADPLP---- 70
           D  D L   ++ QM K PE   F+   P        + + + T P  FN     LP    
Sbjct: 2   DNSDILMNMMMQQMEKLPE--HFSNSNPNPNPHNIMMLSESNTHPFFFNPTHSHLPFDQT 61

Query: 71  -----PPCFLPYSASPRWRTHLAYTGTAANSKENSMAAMREMMYQIAAMQPIHIDPESVK 130
                P     Y+ SP         G + N+   +MAAMREM+++IA MQPIHIDPESVK
Sbjct: 62  MPHHQPGLNFRYAPSPSSSLPEKRGGCSDNA---NMAAMREMIFRIAVMQPIHIDPESVK 121

Query: 131 PPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKFLKN 190
           PPKR+NV+ISKDPQS+AARHRRERIS++IRIL+R+VPGGTKMDTASMLDEAIHYVKFLK 
Sbjct: 122 PPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKK 181

Query: 191 QLHSLQHTAAAAG 192
           Q+ SL+  A   G
Sbjct: 182 QVQSLEEHAVVNG 189

[Close]

BLAST of Sed0018908 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-32
Identity = 76/130 (58.46%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 67  FLPYSAS--PRWRTHLAYTGTAANSKEN---------SMAAMREMMYQIAAMQPIHIDPE 126
           F P+S+S  P   + L  T   +  +E+          + AM+EMMY+IAAMQ + IDP 
Sbjct: 54  FNPFSSSHFPPLSSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPA 113

Query: 127 SVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRRIVPGGTKMDTASMLDEAIHYVKF 186
           +VK PKRRNV+IS DPQS+AARHRRERIS++IRIL+R+VPGGTKMDTASMLDEAI YVKF
Sbjct: 114 TVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKF 173

[Close]

BLAST of Sed0018908 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 64/94 (68.09%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 91  ENSMAAMREMMYQIAAMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRIL 150
           +  M AM+EM Y IA MQP+ IDP +V  P RRNV+IS DPQ++ AR RRERIS+KIRIL
Sbjct: 82  DEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRIL 141

Query: 151 RRIVPGGTKMDTASMLDEAIHYVKFLKNQLHSLQ 185
           +RIVPGG KMDTASMLDEAI Y KFLK Q+  LQ
Sbjct: 142 KRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of Sed0018908 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-26
Identity = 56/93 (60.22%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 93  SMAAMREMMYQIAAMQPIHIDPESVKPPKRRNVKISKDPQSIAARHRRERISQKIRILRR 152
           ++A M+EM+Y+ AA +P++   E V+ PKR+NVKIS DPQ++AAR RRERIS+KIR+L+ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 153 IVPGGTKMDTASMLDEAIHYVKFLKNQLHSLQH 186
           +VPGGTKMDTASMLDEA +Y+KFL+ Q+ +L++
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALEN 333

The following BLAST results are available for this feature:

BLAST of Sed0018908 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996919.1	1.2e-47	58.51	transcription factor HEC2-like [Cucurbita maxima]	[more]
XP_008444609.1	1.6e-47	59.28	PREDICTED: transcription factor HEC3-like [Cucumis melo]	[more]
XP_038886669.1	1.7e-46	58.59	transcription factor HEC2-like [Benincasa hispida]	[more]
XP_011650182.1	1.7e-46	57.50	transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein C...	[more]
KAG7029335.1	2.2e-46	58.73	Transcription factor HEC1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0018908 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	1.0e-38	52.08	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	2.6e-37	51.81	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	2.8e-31	58.46	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
O81313	2.2e-28	68.09	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q8S3D2	8.6e-25	60.22	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of Sed0018908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KA10	5.8e-48	58.51	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 ...	[more]
A0A1S3BA85	7.5e-48	59.28	transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1	[more]
A0A0A0LRA8	1.1e-46	57.21	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 S...	[more]
A0A438DYH6	6.0e-45	57.64	Transcription factor HEC1 OS=Vitis vinifera OX=29760 GN=HEC1_1 PE=4 SV=1	[more]
E0CPU4	6.0e-45	57.64	BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g10400 P...	[more]

BLAST of Sed0018908 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67060.1	7.4e-40	52.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	1.8e-38	51.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	2.0e-32	58.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	1.6e-29	68.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	6.1e-26	60.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 133..182 e-value: 3.2E-13 score: 59.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 134..176 e-value: 2.8E-7 score: 30.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 127..176 score: 14.989319
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 126..195 e-value: 1.1E-11 score: 46.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 131..187
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 79..190
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 79..190
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 128..184 e-value: 3.26944E-35 score: 116.723

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018908.1	Sed0018908.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity