Sed0018884 (gene) Chayote v1

Overview


Name	Sed0018884
Type	gene
Organism	Sechium edule (Chayote v1)
Description	HNH domain-containing protein
Location	LG08: 1284199 .. 1287369 (-)
RNA-Seq Expression	Sed0018884
Synteny	Sed0018884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGTAAAAGGCCCAAAGACGACATGTCGTTTTAGCAAGTGAAACGAAACAAAGGCCAATTCCCATCATTACCGCTCAAATTATATCCATCAATCAACGAGCAGAAGATGAGGCGTAGCAAAGAACCGAAGAAGAAAACTCGGCCAACATCACCGCTCAGGGACCGAACCACAGCTTCAAGTTCAACCAGGCTCGAATCGAGGCGGCGTTATGGGTCAAACCCATCAAGGCTCAGCCCATCTTCTTCCCTTCTGGACCGCCACCTCGTAACCGGCGAACCCAATCTCCTCGAAACCCTAAATCTCTCCGCCGATGACCCTGTTTCAGACTACAATCCCCGGAGCTTTCCTTTCAGCGTGAAGCAGCAATGTTGGGATAAGGCCGACAAGATCACCGGAAGGGACCCAGATCGGTGGCGCCGAGATGCTCTTGGCAACACCGTTTTTCGAAAGCTTGTTGGCTGCCCTGGTTGTCTCTGTCATGATTATGATCACATCTTGCCTTACTCTAAGGTACTTCCCCTTTTATGGATTCTACCTTTTTTTGAACCAGATGTTTGGTTGTTGTTCATTCCTCTTTTTTGTGTGTTTCTTCATTTTAATAATTTAGGGTGTGTGATGGAAATGAGCAAGAACCCTTTGTCGTAGTATGTTTATCATAGACAAACTGAATTATCTTAGGCCAGGATTGGCATGGTGATCAAATAAGGGTTTTGGTAACTTTTATTTTTTTTTAATTAAGGTAACCATGCCCGTAAGGAGTAATGTCACAAGGAAGAGTTGAACTCGGGACCTTGAGGGGAGCATACCCTCAAACCCAAGTCTTCAATCAGTGAGCCACCCGTTGGGAGAAGGGTTTTGGTAAATTATAAGTGGGTTAGATGTAATGAGTCCAATTTTGGATGACCACTTGACTATTAATTCATTTCTTAGGAGTTACCTTTCACAACTAAATTTAGTAAGGCTTGATCTTTTTTATGTGAAAATAATCGAGCTACATGTAAATTGACTTGAACAAAATTGAGCTCCAACACACACAAGTAGAATTGATAGCAATATTTATAGTAATGGGAATTGGAGCTTTGCTCTACTACATACTCAAGAACCCAGGTTTGGACTCAGGAGAGAACAAGAAATTTTATAATTAAGCTTACTCATCGGCTTTGAACTTGAGACTTCTATGGAAGATACTGTGGAAACCCCAAGCCTGTAATAACGACCGCCCCTTAGGGACACGTTTGGATACTGTCAATTATCCTCTATCCGTCTCAGTAGCCCTGATATCTGATACAGTCAATTATCAGTAAGCGTGAACTTTTTTGGTGCAAGGAGGTTTGGAATCTTCTCATCCAAATTTTGTATGCCCATTCCATTGGTCATCCCTTGAGTATCGCTTTCTTTTTCTTTTTTATTGGAAAAGTTGATATCCGATTCTGAGAGGCTACTTGTTCTGAAGTTAATTTTGCCGTATATATTTCTTTCTAATTTCAGTGGCTATTTAGCTTTACAGTTGAGGTTGAGTTTGAATATATCAAATTGCAGGGAGGAAAAAGCACACTGGAAAATTGCCAGGTTTTGCAGGTAACAGCCCTAATGACGCTCCTTTATGTGATCCAAACTTCATTTAGTGCCTTACTTGTCCTTTGCTTAGTGTTTGACTATTTTTCTGAGATACGGGTCATTATTCCTTCAAACTAATTGGAATAGGAGGACATTATATCAGAGGATGTCAATTTTATTTTTCATATTTAAGCAATGACAAAATAATTAACATATGTGGTTTGGTCTCTCCAAATTTCTTTTATAATCTATGTCACTAATCATGTTTCCTATAAAAAATACCACATGTACTGCTATATATTTGGTACTATAATTTTCTTAACTGTAACAGGTTTAGTTATTAAGATCATTGGTTGAAATAACTACCTGGAAAGATCTAAGATCTATATTGATATCAAATAACCAATAAAGTACAAGATAATCTAGTTTTAATAGGACTTGGAACCTCCCATTCTCTAGAGAACACTTCTTGTGAGCCTTAATGATTCTTCTCAGTATTTGGATAACAATTCACAACCCCACCAGACCACCCTTCCTATTTATAACCAAATAGCCCAACTAACTCTCTAACTAATGGCTCAAATACCGCTCATATTATTCCTAGTTCTTCTAATAGCCAAACCTATCACTACCATGGATTGACTTAGTCATAAGAGTTGCTAAAAATAATAAAGATTTCAGAGGCAAACCGTGATCTACTTAGGAGACGGATGTAATATTTTATGAGTTACCTTGGGTGTGAGAATGGTCGAGGTACTTACAAGTTGGCCTCAACCTCAACGTTTCATCAGCGAGAAAGAGTTCTCCCAAATTCATACTTCCATCATCTTATTGTTCTTTTTGATTTCAAAGCCAAATTCTTAGTGTTGTGCAGTTAGAAATACACTAATATTACATTTTGCCTATTTCCGTTTAATGTCTGTATCATATACCACGCAGGCAACCGTTAATCGATCAAAGGGAAACCGTACCGAAATTTCAAGAGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCTGGTACACTACATTTCTTGAACTGCCATAGATTATGGTTTTTACACATTGGTAGTGATAGTATAAGGCCAATTGGTTGAAATTATTTACAGGCAGAGACATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGATGTAGAATTCAGTGACCAGCCTGTAGTAGAAACTTAACAAAAAAAAGTATGGAATTTTTCCTATGTTCTTATTTGTTTTTTAGATGCTTATCGGGTATGTATGAATCAGTTATGTGAACGAACTCATTGGTTGCGTAGTAACAACATGTCTGATTTGTATAGATCCTGTGATTGAAGGGTTAGAGTTCAAAAGCAACAAGTTCATCATGCCTGATCTCTCTTTTTTTTTTTAATAATAAGGATCGGAACTTTGCCTCACTACATACCCATGGCACTTGCGTCCGTCTCAAGGTCCAAATCGAGAGATAATAAGAGATTTTACAATTAAGCTCACCGGTATGTTTAGAATCCGAGACTTCCATACTGGCAAAGGTGTGTTGTGATCACATTTGTAAAGTTAAGATTCTTATTGATCCCACTATCAAGCAG

mRNA sequence

AAGAAGTAAAAGGCCCAAAGACGACATGTCGTTTTAGCAAGTGAAACGAAACAAAGGCCAATTCCCATCATTACCGCTCAAATTATATCCATCAATCAACGAGCAGAAGATGAGGCGTAGCAAAGAACCGAAGAAGAAAACTCGGCCAACATCACCGCTCAGGGACCGAACCACAGCTTCAAGTTCAACCAGGCTCGAATCGAGGCGGCGTTATGGGTCAAACCCATCAAGGCTCAGCCCATCTTCTTCCCTTCTGGACCGCCACCTCGTAACCGGCGAACCCAATCTCCTCGAAACCCTAAATCTCTCCGCCGATGACCCTGTTTCAGACTACAATCCCCGGAGCTTTCCTTTCAGCGTGAAGCAGCAATGTTGGGATAAGGCCGACAAGATCACCGGAAGGGACCCAGATCGGTGGCGCCGAGATGCTCTTGGCAACACCGTTTTTCGAAAGCTTGTTGGCTGCCCTGGTTGTCTCTGTCATGATTATGATCACATCTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGCCAGGTTTTGCAGGCAACCGTTAATCGATCAAAGGGAAACCGTACCGAAATTTCAAGAGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCTGGCAGAGACATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGATGTAGAATTCAGTGACCAGCCTGTAGTAGAAACTTAACAAAAAAAAATCCTGTGATTGAAGGGTTAGAGTTCAAAAGCAACAAGTTCATCATGCCTGATCTCTCTTTTTTTTTTTAATAATAAGGATCGGAACTTTGCCTCACTACATACCCATGGCACTTGCGTCCGTCTCAAGGTCCAAATCGAGAGATAATAAGAGATTTTACAATTAAGCTCACCGGTATGTTTAGAATCCGAGACTTCCATACTGGCAAAGGTGTGTTGTGATCACATTTGTAAAGTTAAGATTCTTATTGATCCCACTATCAAGCAG

Coding sequence (CDS)

ATGAGGCGTAGCAAAGAACCGAAGAAGAAAACTCGGCCAACATCACCGCTCAGGGACCGAACCACAGCTTCAAGTTCAACCAGGCTCGAATCGAGGCGGCGTTATGGGTCAAACCCATCAAGGCTCAGCCCATCTTCTTCCCTTCTGGACCGCCACCTCGTAACCGGCGAACCCAATCTCCTCGAAACCCTAAATCTCTCCGCCGATGACCCTGTTTCAGACTACAATCCCCGGAGCTTTCCTTTCAGCGTGAAGCAGCAATGTTGGGATAAGGCCGACAAGATCACCGGAAGGGACCCAGATCGGTGGCGCCGAGATGCTCTTGGCAACACCGTTTTTCGAAAGCTTGTTGGCTGCCCTGGTTGTCTCTGTCATGATTATGATCACATCTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGCCAGGTTTTGCAGGCAACCGTTAATCGATCAAAGGGAAACCGTACCGAAATTTCAAGAGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCTGGCAGAGACATGGATCTTCTTGAACTGTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGATGTAGAATTCAGTGA

Protein sequence

MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNLLETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

Homology

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BLAST of Sed0018884 vs. NCBI nr
Match: XP_022972967.1 (uncharacterized protein LOC111471489 [Cucurbita maxima])

HSP 1 Score: 354.0 bits (907), Expect = 8.7e-94
Identity = 180/203 (88.67%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MR SKE KKKTRP+SPLRDRT  S STR ES RR+GSN SRLSPS+SLLDR LVT E NL
Sbjct: 1   MRSSKESKKKTRPSSPLRDRT--SPSTRFES-RRHGSNSSRLSPSTSLLDRDLVTSEANL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L LS DD VSDYNPRSFP+SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 2.1e-92
Identity = 178/203 (87.68%), Postives = 185/203 (91.13%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MR SKE KKKTRP+SPLRDRT  S STR ES RR+GS+ SRLSPS+SLLDR LVT E NL
Sbjct: 1   MRSSKESKKKTRPSSPLRDRT--SPSTRFES-RRHGSHSSRLSPSTSLLDRDLVTSEANL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L LS D  VSDYNPRSFP+SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKLSPDHSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa])

HSP 1 Score: 349.0 bits (894), Expect = 2.8e-92
Identity = 178/203 (87.68%), Postives = 185/203 (91.13%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MRRSKE KKKTRP+SPLRDRT A +S  LES  RYGS+PS LSPS+SLLDR LVTGE NL
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTS--LES-TRYGSHPSSLSPSASLLDRDLVTGESNL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L  S +D VS+YNPRSFP SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 4.8e-92
Identity = 178/203 (87.68%), Postives = 184/203 (90.64%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MRRSKE KKKTRP+SPLRDRT   S T LES R YGS+PS LSPS+SLLDR LVTGE +L
Sbjct: 1   MRRSKESKKKTRPSSPLRDRT--GSPTSLES-RPYGSHPSSLSPSASLLDRDLVTGESSL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L  S DD VS+YNPRSFP SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. NCBI nr
Match: XP_022933556.1 (uncharacterized protein LOC111440950 [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 6.2e-92
Identity = 177/203 (87.19%), Postives = 184/203 (90.64%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MR SKE KKKTRP+SPLRDRT  S S R ES RR+GS+ SRLSPS+SLLDR LVT E NL
Sbjct: 1   MRSSKESKKKTRPSSPLRDRT--SPSKRFES-RRHGSHSSRLSPSTSLLDRDLVTSEANL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L LS DD VSDYNPRSFP+SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQD GGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.2e-94
Identity = 180/203 (88.67%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MR SKE KKKTRP+SPLRDRT  S STR ES RR+GSN SRLSPS+SLLDR LVT E NL
Sbjct: 1   MRSSKESKKKTRPSSPLRDRT--SPSTRFES-RRHGSNSSRLSPSTSLLDRDLVTSEANL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L LS DD VSDYNPRSFP+SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.4e-92
Identity = 178/203 (87.68%), Postives = 185/203 (91.13%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MRRSKE KKKTRP+SPLRDRT A +S  LES  RYGS+PS LSPS+SLLDR LVTGE NL
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTS--LES-TRYGSHPSSLSPSASLLDRDLVTGESNL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L  S +D VS+YNPRSFP SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.4e-92
Identity = 178/203 (87.68%), Postives = 185/203 (91.13%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MRRSKE KKKTRP+SPLRDRT A +S  LES  RYGS+PS LSPS+SLLDR LVTGE NL
Sbjct: 1   MRRSKESKKKTRPSSPLRDRTGAPTS--LES-TRYGSHPSSLSPSASLLDRDLVTGESNL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L  S +D VS+YNPRSFP SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKFSPNDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.3e-92
Identity = 178/203 (87.68%), Postives = 184/203 (90.64%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MRRSKE KKKTRP+SPLRDRT   S T LES R YGS+PS LSPS+SLLDR LVTGE +L
Sbjct: 1   MRRSKESKKKTRPSSPLRDRT--GSPTSLES-RPYGSHPSSLSPSASLLDRDLVTGESSL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L  S DD VS+YNPRSFP SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQDSGGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDSGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. ExPASy TrEMBL
Match: A0A6J1EZE0 (uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC111440950 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92
Identity = 177/203 (87.19%), Postives = 184/203 (90.64%), Query Frame = 0


Query: 1   MRRSKEPKKKTRPTSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNL 60
           MR SKE KKKTRP+SPLRDRT  S S R ES RR+GS+ SRLSPS+SLLDR LVT E NL
Sbjct: 1   MRSSKESKKKTRPSSPLRDRT--SPSKRFES-RRHGSHSSRLSPSTSLLDRDLVTSEANL 60

Query: 61  LETLNLSADDPVSDYNPRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCP 120
           L  L LS DD VSDYNPRSFP+SVKQQCWDKA+KI GRDPDRWRRDALGNTVFRKLVGCP
Sbjct: 61  LGDLKLSPDDSVSDYNPRSFPYSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCP 120

Query: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDM 180
           GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDM
Sbjct: 121 GCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTELSRAELIQKSSYCRVSGRDM 180

Query: 181 DLLELSAYGNVHRGQDSGGCRIQ 204
           DLLELSAYGNVHRGQD GGCRIQ
Sbjct: 181 DLLELSAYGNVHRGQDPGGCRIQ 200

[Close]

BLAST of Sed0018884 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease )

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-61
Identity = 128/213 (60.09%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 4   SKEPKKKTRPTSPLRDRTTA-SSSTRLESRRRYGS-NPSR---------LSPSSSLLDRH 63
           S  P+       P R R  A SSS+  ++R    S +P+R         +  S++LLDR 
Sbjct: 32  SDNPQHSAMKPDPTRRRNRALSSSSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDR- 91

Query: 64  LVTGEPNLLETLNLSADDPVSDYN--PRSFPFSVKQQCWDKADKITGRDPDRWRRDALGN 123
                    E + L       D N  PRSFP+SVKQQCW+KA+KI GRDP+RWRRD LGN
Sbjct: 92  ---------EEMGLFPGSGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGN 151

Query: 124 TVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKS 183
            VFRKLVGCPGCLCHDYDHI+PYSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+S
Sbjct: 152 IVFRKLVGCPGCLCHDYDHIVPYSKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRS 211

Query: 184 SYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 204
           SYCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 212 SYCRVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 234

[Close]

BLAST of Sed0018884 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease )

HSP 1 Score: 224.9 bits (572), Expect = 5.7e-59
Identity = 121/212 (57.08%), Postives = 143/212 (67.45%), Query Frame = 0


Query: 14  TSPLRDRTTASSSTRLESRRRYGSNPSRLSPSSSLLDRHLVTGEPNLLETLNLSADDPVS 73
           +SP + R   SS +   +R    +   ++  S++LLDR          E + L       
Sbjct: 16  SSPSKTRPELSSGS--PNRNTGEARGGKVKTSATLLDR----------EEMGLFPGSGYG 75

Query: 74  DYN--PRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHIL 133
           D N  PRSFP+SVKQQCW+KA+KI GRDP+RWRRD LGN VFRKLVGCPGCLCHDYDHI+
Sbjct: 76  DPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGNIVFRKLVGCPGCLCHDYDHIV 135

Query: 134 PYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSS 193
           PYS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SS
Sbjct: 136 PYSKDMCPLEHAFDEPHKDFLDLKGGKSTLENCQVLQAKVNRSKGNKTDISRSELIQRSS 195

Query: 194 YCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ 204
           YCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Sbjct: 196 YCRVAGRDMDLIELTAYGNVQRAPTSSGCRIQ 215

[Close]

BLAST of Sed0018884 vs. TAIR 10
Match: AT1G18680.1 (HNH endonuclease domain-containing protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 77  PRSFPFSVKQQCWDKADKITGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKG 136
           PR F    K +CW  AD + GR P+RWR+D  GN V ++   C GCLC +YDHI+PYSKG
Sbjct: 40  PRFFDGKAKNKCWANADIVPGRHPERWRKDVAGNIVCKRFGNCNGCLCFEYDHIVPYSKG 99

Query: 137 GKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD 196
           G+S  ENCQ+LQ  VNR K  +  +    L   S   + + +++D++E++ YG+V R   
Sbjct: 100 GESIAENCQILQTRVNRFKSAQENVDATTLKSYSCGLQFTDKELDVIEMAVYGDVLRPGK 159

Query: 197 SGGCR 202
              C+
Sbjct: 160 ECRCK 164

[Close]

BLAST of Sed0018884 vs. TAIR 10
Match: AT3G47490.2 (HNH endonuclease )

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28
Identity = 73/145 (50.34%), Postives = 88/145 (60.69%), Query Frame = 0


Query: 4   SKEPKKKTRPTSPLRDRTTA-SSSTRLESRRRYGS-NPSR---------LSPSSSLLDRH 63
           S  P+       P R R  A SSS+  ++R    S +P+R         +  S++LLDR 
Sbjct: 32  SDNPQHSAMKPDPTRRRNRALSSSSPSKTRPELSSGSPNRNTGEARGGKVKTSATLLDR- 91

Query: 64  LVTGEPNLLETLNLSADDPVSDYN--PRSFPFSVKQQCWDKADKITGRDPDRWRRDALGN 123
                    E + L       D N  PRSFP+SVKQQCW+KA+KI GRDP+RWRRD LGN
Sbjct: 92  ---------EEMGLFPGSGYGDPNPEPRSFPYSVKQQCWEKAEKIKGRDPERWRRDHLGN 151

Query: 124 TVFRKLVGCPGCLCHDYDHILPYSK 136
            VFRKLVGCPGCLCHDYDHI+PYSK
Sbjct: 152 IVFRKLVGCPGCLCHDYDHIVPYSK 166

The following BLAST results are available for this feature:

BLAST of Sed0018884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972967.1	8.7e-94	88.67	uncharacterized protein LOC111471489 [Cucurbita maxima]	[more]
XP_023529236.1	2.1e-92	87.68	uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]	[more]
XP_008453210.1	2.8e-92	87.68	PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH...	[more]
XP_004138170.1	4.8e-92	87.68	uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical ...	[more]
XP_022933556.1	6.2e-92	87.19	uncharacterized protein LOC111440950 [Cucurbita moschata]	[more]

BLAST of Sed0018884 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0018884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I688	4.2e-94	88.67	uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489...	[more]
A0A5A7US43	1.4e-92	87.68	HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002...	[more]
A0A1S3BWU4	1.4e-92	87.68	uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=...	[more]
A0A0A0LUI5	2.3e-92	87.68	HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV...	[more]
A0A6J1EZE0	3.0e-92	87.19	uncharacterized protein LOC111440950 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]

BLAST of Sed0018884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47490.1	1.2e-61	60.09	HNH endonuclease	[more]
AT3G47490.3	5.7e-59	57.08	HNH endonuclease	[more]
AT1G18680.1	4.0e-28	42.40	HNH endonuclease domain-containing protein	[more]
AT3G47490.2	4.0e-28	50.34	HNH endonuclease	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..49
None	No IPR available	PANTHER	PTHR33427:SF3	HNH ENDONUCLEASE	coord: 9..151
None	No IPR available	PANTHER	PTHR33427	HNH ENDONUCLEASE	coord: 9..151
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 112..147 e-value: 1.41974E-4 score: 36.2956

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018884.1	Sed0018884.1	mRNA
Sed0018884.2	Sed0018884.2	mRNA
Sed0018884.3	Sed0018884.3	mRNA
Sed0018884.4	Sed0018884.4	mRNA
Sed0018884.5	Sed0018884.5	mRNA
Sed0018884.6	Sed0018884.6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding