Sed0018806 (gene) Chayote v1

Overview


Name	Sed0018806
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin efflux carrier component
Location	LG11: 7809801 .. 7811448 (-)
RNA-Seq Expression	Sed0018806
Synteny	Sed0018806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCATGGAAGCTGGTGGAGGCATTGGTTCCCTTATGCATCATATTATTTGCAGGCTTTGCTTATGTGAAATTCTTCAAAATCTTCACCATTGAAGACCTTGAAACCTTCAGCAATCTTCTCTACTACATTCTTCTTCCTTCCTCCACATTCCTCTTCGCTTCCCGAGTTGACCCTTATCATCTCAACCTCCGGTTCCTCGCCGCCGATGTCATTTCGAAGCTTTTCGTCATTTTTTTCCTGGCTCTATGGGTCCGTTTCCACCCTAACGGATCCTTGCACTGGGCTATCACTTGCTTCTCTCTCTGCTTTCTCACCAACTCCCTCATCATCGGTCTTCCCCTCGCCAACTCCAGGTTCGGTCCCGAGGCTGTTGAACTTGTCGTACAGGTAAGGAAACGAAGAAACTCCATGTCCTTAGGGCTACTCTCCTAACCTCATTTTATTTGAATTCTTAGTCATAAAACTAAAAATCAAACCCTATTTCTCATTTTTAGTTTGGGAGATTTGAACTTTAGGCACAATTAAGGCAATCAATCACTTTAATTACTCTTGATAATCGTTTAATTTTGCTTTTTGTTTTTTTTTTCTTTTTTTGAAATGTAAGCTTAGATATTTTTATGTTATTTTCTATAATTTTGTATTACGATTTCCGTTTTTTTACGTTATTTTGAAATTTTAGCTTAGTTGGAGAGTTTTATAAGTTCTATGATCTAATCAATCCATAACTAATTTAATAACGTTAGGCGGAATCAAATCCATTCGATTTACCACAAAACATTGCAGCAAATAGCTTATTACAGTTACAATGGATAATTATTTTTATTTTTTTATCATTTTTATCAAATTTTGTATTTTTTCTATAATTTTCAATAAAAATTTGAGTTTTTAGACAAATTCAAAAATACTTTTTTTTTGTTTTCAAAATTTGGATTCATTTTCGACAACATAGAAAAATGTAGATGCATTAGCAAAGAAATCTAGATAAAAGTAGTATTTATTGTATCTAAAAATAGTATTTATTGATTGAATTTCCAAAAATAAAGAATTAAATAGTTTTCAAATGAGATAAGATGCTAGTTCTTATGAAGCCGCAACTCTTTCTCGCTTTCTTTTTTTAGGGAATAAATGCTTACACACCTCTATTTGTTACTCAGTTGATCAATAAGGTTAAATATTGTTTGTAAATAAAATCATGGGCATTTAAGAATTAAACAACAATAAAGAGTGGGCTAATATAATCATATAAAAGTAGTATTTCAGGAGTCCAACCTATTGATGTTAAACTCAAGCATATGAAAGTACTAACATGTCTAATGGATATTTACAATTTTGAGTGTAGACCTCGGTGCTTCAGGCTGTTTTTTGGCATCCGATGCTGCTCATTGTGCTCGAGGTCTGTCAAAAGAGGTTCCAATCCTCAGACACTGCCAAAGCTTCAAGCTCGGACGACAATGCGCAGACAATCGGAGAAGATGAAGAGAATAATTTGGAGGCAGGAAGTGTGGAGCTTGAGGAAACAAGCAGCAACCACAACAATATGCTTCTATTAATGGTGAAGAAAGTTTTTATCAAGTTGATCACTAATCCAAACATTTATGCTTGTGTCTTCGCTTTAGTATGGGCAGTTGTTGCAAAAAGGTAA

mRNA sequence

ATGGATTCATGGAAGCTGGTGGAGGCATTGGTTCCCTTATGCATCATATTATTTGCAGGCTTTGCTTATGTGAAATTCTTCAAAATCTTCACCATTGAAGACCTTGAAACCTTCAGCAATCTTCTCTACTACATTCTTCTTCCTTCCTCCACATTCCTCTTCGCTTCCCGAGTTGACCCTTATCATCTCAACCTCCGGTTCCTCGCCGCCGATGTCATTTCGAAGCTTTTCGTCATTTTTTTCCTGGCTCTATGGGTCCGTTTCCACCCTAACGGATCCTTGCACTGGGCTATCACTTGCTTCTCTCTCTGCTTTCTCACCAACTCCCTCATCATCGGTCTTCCCCTCGCCAACTCCAGGTTCGGTCCCGAGGCTGTTGAACTTGTCGTACAGGCTGTTTTTTGGCATCCGATGCTGCTCATTGTGCTCGAGGTCTGTCAAAAGAGGTTCCAATCCTCAGACACTGCCAAAGCTTCAAGCTCGGACGACAATGCGCAGACAATCGGAGAAGATGAAGAGAATAATTTGGAGGCAGGAAGTGTGGAGCTTGAGGAAACAAGCAGCAACCACAACAATATGCTTCTATTAATGGTGAAGAAAGTTTTTATCAAGTTGATCACTAATCCAAACATTTATGCTTGTGTCTTCGCTTTAGTATGGGCAGTTGTTGCAAAAAGGTAA

Coding sequence (CDS)

ATGGATTCATGGAAGCTGGTGGAGGCATTGGTTCCCTTATGCATCATATTATTTGCAGGCTTTGCTTATGTGAAATTCTTCAAAATCTTCACCATTGAAGACCTTGAAACCTTCAGCAATCTTCTCTACTACATTCTTCTTCCTTCCTCCACATTCCTCTTCGCTTCCCGAGTTGACCCTTATCATCTCAACCTCCGGTTCCTCGCCGCCGATGTCATTTCGAAGCTTTTCGTCATTTTTTTCCTGGCTCTATGGGTCCGTTTCCACCCTAACGGATCCTTGCACTGGGCTATCACTTGCTTCTCTCTCTGCTTTCTCACCAACTCCCTCATCATCGGTCTTCCCCTCGCCAACTCCAGGTTCGGTCCCGAGGCTGTTGAACTTGTCGTACAGGCTGTTTTTTGGCATCCGATGCTGCTCATTGTGCTCGAGGTCTGTCAAAAGAGGTTCCAATCCTCAGACACTGCCAAAGCTTCAAGCTCGGACGACAATGCGCAGACAATCGGAGAAGATGAAGAGAATAATTTGGAGGCAGGAAGTGTGGAGCTTGAGGAAACAAGCAGCAACCACAACAATATGCTTCTATTAATGGTGAAGAAAGTTTTTATCAAGTTGATCACTAATCCAAACATTTATGCTTGTGTCTTCGCTTTAGTATGGGCAGTTGTTGCAAAAAGGTAA

Protein sequence

MDSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPYHLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRFGPEAVELVVQAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNAQTIGEDEENNLEAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR

Homology

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BLAST of Sed0018806 vs. NCBI nr
Match: XP_023536981.1 (auxin efflux carrier component 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-40
Identity = 104/236 (44.07%), Postives = 147/236 (62.29%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++ A+ PL   L  G+  VK++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W +    GS  W+IT FSL  LTN+L+IG+PLA   +
Sbjct: 66  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNA-----QTIGED 181
           G  AV+LVV     QA+ W  MLL VLE+ +       + ++SSSDD+      Q +GE 
Sbjct: 126 GQMAVDLVVQGSVIQAIIWLTMLLFVLELRRTGLNLVASRESSSSDDDGHEKAIQMVGEG 185

Query: 182 EENNLEAGSVELEETSSN-HNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
            + ++E G++E+EE  SN H     L++KKV++KL+ NPN YAC+  L WA VAKR
Sbjct: 186 GK-DVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKR 240

[Close]

BLAST of Sed0018806 vs. NCBI nr
Match: XP_022937707.1 (auxin efflux carrier component 5 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-40
Identity = 104/236 (44.07%), Postives = 147/236 (62.29%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++ A+ PL   L  G+  VK++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W +    GS  W+IT FSL  LTN+L+IG+PLA   +
Sbjct: 66  HLNFPFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDN-----AQTIGED 181
           G  AV+LVV     QA+ W  MLL VLE+ +       + ++SSSDD+      Q +GE 
Sbjct: 126 GQMAVDLVVQGSVIQAIIWLTMLLFVLELRRTGLNLVASRESSSSDDDGHGKATQMVGEG 185

Query: 182 EENNLEAGSVELEETSSN-HNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
            + ++E G++E+EE  SN H     L++KKV++KL+ NPN YAC+  L WA VAKR
Sbjct: 186 GK-DVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKR 240

[Close]

BLAST of Sed0018806 vs. NCBI nr
Match: KAG6586145.1 (Auxin efflux carrier component 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-40
Identity = 104/236 (44.07%), Postives = 147/236 (62.29%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++ A+ PL   L  G+  VK++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W +    GS  W+IT FSL  LTN+L+IG+PLA   +
Sbjct: 66  HLNFPFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDN-----AQTIGED 181
           G  AV+LVV     QA+ W  MLL VLE+ +       + ++SSSDD+      Q +GE 
Sbjct: 126 GQMAVDLVVQGSVIQAIIWLTMLLFVLELRRTGLNLVASRESSSSDDDGHGKATQMVGEG 185

Query: 182 EENNLEAGSVELEETSSN-HNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
            + ++E G++E+EE  SN H     L++KKV++KL+ NPN YAC+  L WA VAKR
Sbjct: 186 GK-DVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKR 240

[Close]

BLAST of Sed0018806 vs. NCBI nr
Match: XP_022966048.1 (auxin efflux carrier component 5 [Cucurbita maxima])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 103/236 (43.64%), Postives = 146/236 (61.86%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++ A+ PL   L  G+  VK++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFDFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W +    GS  W+IT FSL  LTN+L+IG+PLA   +
Sbjct: 66  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDN-----AQTIGED 181
           G  AV+LVV     QA+ W  MLL VLE+ +       + ++ SSDD+      Q +GE 
Sbjct: 126 GQMAVDLVVQGSVIQAIIWLTMLLFVLELRRTGLNLVASRESLSSDDDEHGKAIQMVGEG 185

Query: 182 EENNLEAGSVELEETSSN-HNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
            + ++E G++E+EE  SN H     L++KKV++KL+ NPN YAC+  L WA VAKR
Sbjct: 186 GK-DVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKR 240

[Close]

BLAST of Sed0018806 vs. NCBI nr
Match: XP_022149923.1 (auxin efflux carrier component 5 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 5.8e-38
Identity = 99/236 (41.95%), Postives = 144/236 (61.02%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D++K+V A+ PL   L  G+  V+++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DAYKVVAAMAPLYFALALGYGSVRWWKIFSTEQCDAINKLVCYFTLPLFTFDFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W R  P GS  W+IT FSL  LTNSL++G+PLA   +
Sbjct: 66  HLNFPFIAADAISKLLIVVVLAFWARCTPKGSYCWSITSFSLSTLTNSLVVGVPLAKIMY 125

Query: 122 GPEAVEL-----VVQAVFWHPMLLIVLEVCQKRFQ--SSDTAKASSSDDNAQTIG--EDE 181
           G  AV+L     VVQA+ W  +LL VLE+ + R    + + + +    D+ + +   E+ 
Sbjct: 126 GQMAVDLVVQGSVVQAIVWLTILLFVLELRRTRLDLVAGEASSSFGPGDHGKALQMVEEG 185

Query: 182 ENNLEAGSVELE--ETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
             NLE  ++E+E  ETS++H      ++KKV++KL  NPN YAC+    WA VAKR
Sbjct: 186 RKNLEGEAMEVEGRETSNSHRASFKPLMKKVWLKLAANPNSYACIIGFAWAFVAKR 241

[Close]

BLAST of Sed0018806 vs. ExPASy Swiss-Prot
Match: Q9FFD0 (Auxin efflux carrier component 5 OS=Arabidopsis thaliana OX=3702 GN=PIN5 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 6.6e-37
Identity = 91/230 (39.57%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++EA+VPL + L  G+  VK++ IFT +  +  + L+ Y  LP  T  F + VDP+
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           ++N RF+AADV+SK+ ++  LALW ++   GS  W+IT FSLC LTNSL++G+PLA + +
Sbjct: 66  NMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNAQTIGEDEENNL 181
           G +AV+LVV     QA+ W  +LL VLE            KA  S +N   +  D   N+
Sbjct: 126 GQQAVDLVVQSSVFQAIVWLTLLLFVLEF----------RKAGFSSNNISDVQVD-NINI 185

Query: 182 EAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
           E+G     ET        L ++  V++KL TNPN Y+C+  + WA ++ R
Sbjct: 186 ESGK---RETVVVGEKSFLEVMSLVWLKLATNPNCYSCILGIAWAFISNR 221

[Close]

BLAST of Sed0018806 vs. ExPASy Swiss-Prot
Match: Q5JLM1 (Probable auxin efflux carrier component 5a OS=Oryza sativa subsp. japonica OX=39947 GN=PIN5A PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 86/236 (36.44%), Postives = 126/236 (53.39%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K+V A VPL   LF G+  V++++IFT E  +  + L+ +  LP  TF F    DP+
Sbjct: 6   DVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTLHTDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNG--SLHWAITCFSLCFLTNSLIIGLPLANS 121
            +N R +AADVISK  ++  +  W RF   G  ++ W+IT FSL  LTNSL++G+P+A +
Sbjct: 66  QVNYRAVAADVISKAVIVAVIGAWARFMSKGGCAVSWSITSFSLSTLTNSLVVGVPMARA 125

Query: 122 RFGPEAVELVV-----QAVFWHPMLLIVLEVCQKRF----QSSDTAKASSSDDNAQTIGE 181
            +G  A +LVV     QA+ W  +LL VLEV +         ++ A A+  D  A     
Sbjct: 126 MYGEWAQQLVVQLSVFQAIVWLTLLLFVLEVRKAAIGMYVDGAEAAAAAGKDVEAAGAA- 185

Query: 182 DEENNLEAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
                  AG+V +   +   +  L  +VK V  KL  NPN YA    + WA +A R
Sbjct: 186 -----AAAGTVVVAAAAGKPS--LWALVKVVAHKLARNPNTYASFVGITWACLANR 233

[Close]

BLAST of Sed0018806 vs. ExPASy Swiss-Prot
Match: D5A7J3 (Probable auxin efflux carrier component 5b OS=Oryza sativa subsp. japonica OX=39947 GN=PIN5B PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-21
Identity = 77/243 (31.69%), Postives = 124/243 (51.03%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K+V A+ PL   L  G+  V+++++FT +  +  + L+    +P   F FA+R+DP+
Sbjct: 6   DVYKVVAAMAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVACFAVPFFAFDFAARIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWV-------------RFHPNGSLHWAITCFSLCFLTN 121
            L+ R LAAD +SKL V   LA                +    G   W IT FSL  L N
Sbjct: 66  ALSYRVLAADALSKLAVALALAACAAAASTRCCGSGGGKRGGGGGFSWCITGFSLATLNN 125

Query: 122 SLIIGLPLANSRFGPEAVEL-----VVQAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDD 181
           +L++G+PL ++ +G  A +L     VVQ + + P+LL+  EV     + + TA A+    
Sbjct: 126 TLVVGVPLLDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEV-----RRATTAAAAPPPP 185

Query: 182 NAQTIGEDEENNLEAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVV 227
              T  +D E+   A +     T++     L  +V+ V++K+  NPN+YA V  + WA V
Sbjct: 186 PTGTDDDDVEDGAAAAA-----TAAAARRSLWPLVRAVWLKVARNPNVYAGVLGVAWACV 238

[Close]

BLAST of Sed0018806 vs. ExPASy Swiss-Prot
Match: Q6ZIB5 (Probable auxin efflux carrier component 5c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN5C PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.7e-21
Identity = 70/236 (29.66%), Postives = 114/236 (48.31%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K+V A+ PL   L  G+  V++++ FT E     + ++ Y  +P  TF F  R DP+
Sbjct: 6   DVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVVRTDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFH------PNGSLHWAITCFSLCFLTNSLIIGLP 121
            +N R +AAD +SK   I  +A W R          G+  W+IT FSL  L N+L++G+P
Sbjct: 66  AMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTLVVGVP 125

Query: 122 LANSRFGPEAVEL-----VVQAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNAQTIGE 181
           L ++ +G  A +L     VVQ++ W P+LL+  E+ +            +   ++    +
Sbjct: 126 LLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKAWVVGGGGGVGPAVMSSSSPPEK 185

Query: 182 DEENNLEAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
             +  +    V                 + V +KL  NPN+YA V  +VWA +A R
Sbjct: 186 QSDVEMNGAVVAAPGGGGGVRLPFWATARTVGLKLARNPNVYASVLGVVWACIAYR 241

[Close]

BLAST of Sed0018806 vs. ExPASy Swiss-Prot
Match: Q8RWZ6 (Auxin efflux carrier component 4 OS=Arabidopsis thaliana OX=3702 GN=PIN4 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.4e-20
Identity = 53/148 (35.81%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D + ++ A+VPL + +   +  V+++KIF+ +     +  +    +P  +F F S  DPY
Sbjct: 6   DLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPY 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
            +N RF+AAD + K+ ++  LALW     NGSL W IT FSL  L N+L++G+PL  + +
Sbjct: 66  AMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 122 GPEAVELVVQAV-----FWHPMLLIVLE 145
           G  A  L+VQ V      W+ +LL + E
Sbjct: 126 GTYAGSLMVQVVVLQCIIWYTLLLFLFE 153

[Close]

BLAST of Sed0018806 vs. ExPASy TrEMBL
Match: A0A6J1FBZ5 (Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111444027 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 104/236 (44.07%), Postives = 147/236 (62.29%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++ A+ PL   L  G+  VK++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W +    GS  W+IT FSL  LTN+L+IG+PLA   +
Sbjct: 66  HLNFPFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDN-----AQTIGED 181
           G  AV+LVV     QA+ W  MLL VLE+ +       + ++SSSDD+      Q +GE 
Sbjct: 126 GQMAVDLVVQGSVIQAIIWLTMLLFVLELRRTGLNLVASRESSSSDDDGHGKATQMVGEG 185

Query: 182 EENNLEAGSVELEETSSN-HNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
            + ++E G++E+EE  SN H     L++KKV++KL+ NPN YAC+  L WA VAKR
Sbjct: 186 GK-DVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKR 240

[Close]

BLAST of Sed0018806 vs. ExPASy TrEMBL
Match: A0A6J1HQQ5 (Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111465776 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 6.6e-40
Identity = 103/236 (43.64%), Postives = 146/236 (61.86%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++ A+ PL   L  G+  VK++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFDFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W +    GS  W+IT FSL  LTN+L+IG+PLA   +
Sbjct: 66  HLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPLAKVMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDN-----AQTIGED 181
           G  AV+LVV     QA+ W  MLL VLE+ +       + ++ SSDD+      Q +GE 
Sbjct: 126 GQMAVDLVVQGSVIQAIIWLTMLLFVLELRRTGLNLVASRESLSSDDDEHGKAIQMVGEG 185

Query: 182 EENNLEAGSVELEETSSN-HNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
            + ++E G++E+EE  SN H     L++KKV++KL+ NPN YAC+  L WA VAKR
Sbjct: 186 GK-DVEGGAMEVEERRSNSHKPSFKLLMKKVWLKLVANPNSYACIIGLAWAFVAKR 240

[Close]

BLAST of Sed0018806 vs. ExPASy TrEMBL
Match: A0A6J1D820 (Auxin efflux carrier component OS=Momordica charantia OX=3673 GN=LOC111018220 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.8e-38
Identity = 99/236 (41.95%), Postives = 144/236 (61.02%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D++K+V A+ PL   L  G+  V+++KIF+ E  +  + L+ Y  LP  TF F S +DP+
Sbjct: 6   DAYKVVAAMAPLYFALALGYGSVRWWKIFSTEQCDAINKLVCYFTLPLFTFDFTSHIDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           HLN  F+AAD ISKL ++  LA W R  P GS  W+IT FSL  LTNSL++G+PLA   +
Sbjct: 66  HLNFPFIAADAISKLLIVVVLAFWARCTPKGSYCWSITSFSLSTLTNSLVVGVPLAKIMY 125

Query: 122 GPEAVEL-----VVQAVFWHPMLLIVLEVCQKRFQ--SSDTAKASSSDDNAQTIG--EDE 181
           G  AV+L     VVQA+ W  +LL VLE+ + R    + + + +    D+ + +   E+ 
Sbjct: 126 GQMAVDLVVQGSVVQAIVWLTILLFVLELRRTRLDLVAGEASSSFGPGDHGKALQMVEEG 185

Query: 182 ENNLEAGSVELE--ETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
             NLE  ++E+E  ETS++H      ++KKV++KL  NPN YAC+    WA VAKR
Sbjct: 186 RKNLEGEAMEVEGRETSNSHRASFKPLMKKVWLKLAANPNSYACIIGFAWAFVAKR 241

[Close]

BLAST of Sed0018806 vs. ExPASy TrEMBL
Match: A0A3P6AAR9 (Auxin efflux carrier component OS=Brassica oleracea OX=3712 GN=BOLC3T13401H PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 4.5e-36
Identity = 89/230 (38.70%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++EA+VPL + L +G+  VK++ IFT +  +  + L+YY  LP  T  F + VDP+
Sbjct: 6   DVYKVIEAMVPLYVALISGYGSVKWWNIFTRDQCDAINQLVYYFTLPLFTIEFTAHVDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           ++N RF+AADV+SK+ +I  LA W ++   GS  W+IT FSLC LTNSL++G+PLA + +
Sbjct: 66  NMNYRFIAADVLSKIIIIAVLAFWAKYSSKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNAQTIGEDEENNL 181
           G EAV+LVV     QA+ W  +LL VLE+ +  F S++                 ++ N+
Sbjct: 126 GQEAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSSNNKV---------------DDINI 185

Query: 182 EAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
           E G    E          L ++  V++KL TNPN Y+C+  + WA ++ R
Sbjct: 186 EGG--RKETVVVREEKSFLEVMSVVWLKLATNPNCYSCILGIAWAFISNR 218

[Close]

BLAST of Sed0018806 vs. ExPASy TrEMBL
Match: A0A0D3B1H7 (Auxin efflux carrier component OS=Brassica oleracea var. oleracea OX=109376 GN=106335431 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 4.5e-36
Identity = 89/230 (38.70%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++EA+VPL + L +G+  VK++ IFT +  +  + L+YY  LP  T  F + VDP+
Sbjct: 6   DVYKVIEAMVPLYVALISGYGSVKWWNIFTRDQCDAINQLVYYFTLPLFTIEFTAHVDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           ++N RF+AADV+SK+ +I  LA W ++   GS  W+IT FSLC LTNSL++G+PLA + +
Sbjct: 66  NMNYRFIAADVLSKIIIIAVLAFWAKYSSKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNAQTIGEDEENNL 181
           G EAV+LVV     QA+ W  +LL VLE+ +  F S++                 ++ N+
Sbjct: 126 GQEAVDLVVQSSVFQAIVWLTLLLFVLELRRAGFSSNNKV---------------DDINI 185

Query: 182 EAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
           E G    E          L ++  V++KL TNPN Y+C+  + WA ++ R
Sbjct: 186 EGG--RKETVVVREEKSFLEVMSVVWLKLATNPNCYSCILGIAWAFISNR 218

[Close]

BLAST of Sed0018806 vs. TAIR 10
Match: AT5G16530.1 (Auxin efflux carrier family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.7e-38
Identity = 91/230 (39.57%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D +K++EA+VPL + L  G+  VK++ IFT +  +  + L+ Y  LP  T  F + VDP+
Sbjct: 6   DVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTAHVDPF 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
           ++N RF+AADV+SK+ ++  LALW ++   GS  W+IT FSLC LTNSL++G+PLA + +
Sbjct: 66  NMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPLAKAMY 125

Query: 122 GPEAVELVV-----QAVFWHPMLLIVLEVCQKRFQSSDTAKASSSDDNAQTIGEDEENNL 181
           G +AV+LVV     QA+ W  +LL VLE            KA  S +N   +  D   N+
Sbjct: 126 GQQAVDLVVQSSVFQAIVWLTLLLFVLEF----------RKAGFSSNNISDVQVD-NINI 185

Query: 182 EAGSVELEETSSNHNNMLLLMVKKVFIKLITNPNIYACVFALVWAVVAKR 227
           E+G     ET        L ++  V++KL TNPN Y+C+  + WA ++ R
Sbjct: 186 ESGK---RETVVVGEKSFLEVMSLVWLKLATNPNCYSCILGIAWAFISNR 221

[Close]

BLAST of Sed0018806 vs. TAIR 10
Match: AT2G01420.1 (Auxin efflux carrier family protein )

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-21
Identity = 53/148 (35.81%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D + ++ A+VPL + +   +  V+++KIF+ +     +  +    +P  +F F S  DPY
Sbjct: 6   DLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPY 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
            +N RF+AAD + K+ ++  LALW     NGSL W IT FSL  L N+L++G+PL  + +
Sbjct: 66  AMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 122 GPEAVELVVQAV-----FWHPMLLIVLE 145
           G  A  L+VQ V      W+ +LL + E
Sbjct: 126 GTYAGSLMVQVVVLQCIIWYTLLLFLFE 153

[Close]

BLAST of Sed0018806 vs. TAIR 10
Match: AT2G01420.2 (Auxin efflux carrier family protein )

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-21
Identity = 53/148 (35.81%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D + ++ A+VPL + +   +  V+++KIF+ +     +  +    +P  +F F S  DPY
Sbjct: 6   DLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNDPY 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
            +N RF+AAD + K+ ++  LALW     NGSL W IT FSL  L N+L++G+PL  + +
Sbjct: 66  AMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 122 GPEAVELVVQAV-----FWHPMLLIVLE 145
           G  A  L+VQ V      W+ +LL + E
Sbjct: 126 GTYAGSLMVQVVVLQCIIWYTLLLFLFE 153

[Close]

BLAST of Sed0018806 vs. TAIR 10
Match: AT1G73590.1 (Auxin efflux carrier family protein )

HSP 1 Score: 98.2 bits (243), Expect = 8.9e-21
Identity = 52/148 (35.14%), Postives = 86/148 (58.11%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D + ++ A+VPL + +   +  VK++KIFT +     +  +    +P  +F F +  +PY
Sbjct: 6   DFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPY 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
            +NLRFLAAD + K+ V+  L LW +   NGSL W IT FSL  L N+L++G+PL    +
Sbjct: 66  AMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPLLKGMY 125

Query: 122 GPEAVEL-----VVQAVFWHPMLLIVLE 145
           G  + +L     V+Q + W+ ++L + E
Sbjct: 126 GNFSGDLMVQIVVLQCIIWYTLMLFLFE 153

[Close]

BLAST of Sed0018806 vs. TAIR 10
Match: AT1G70940.1 (Auxin efflux carrier family protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-20
Identity = 49/148 (33.11%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 2   DSWKLVEALVPLCIILFAGFAYVKFFKIFTIEDLETFSNLLYYILLPSSTFLFASRVDPY 61
           D + ++ A++PL + +   +  V+++KIF+ +     +  +    +P  +F F S  +PY
Sbjct: 6   DLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPY 65

Query: 62  HLNLRFLAADVISKLFVIFFLALWVRFHPNGSLHWAITCFSLCFLTNSLIIGLPLANSRF 121
            +NLRF+AAD + K+ ++  L LW  F  +GSL W+IT FSL  L N+L++G+PL  + +
Sbjct: 66  AMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPLLIAMY 125

Query: 122 GPEAVEL-----VVQAVFWHPMLLIVLE 145
           G  +  L     V+Q + W+ +LL + E
Sbjct: 126 GEYSGSLMVQIVVLQCIIWYTLLLFLFE 153

The following BLAST results are available for this feature:

BLAST of Sed0018806 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536981.1	1.6e-40	44.07	auxin efflux carrier component 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022937707.1	2.8e-40	44.07	auxin efflux carrier component 5 [Cucurbita moschata]	[more]
KAG6586145.1	2.8e-40	44.07	Auxin efflux carrier component 5, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022966048.1	1.4e-39	43.64	auxin efflux carrier component 5 [Cucurbita maxima]	[more]
XP_022149923.1	5.8e-38	41.95	auxin efflux carrier component 5 [Momordica charantia]	[more]

BLAST of Sed0018806 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFD0	6.6e-37	39.57	Auxin efflux carrier component 5 OS=Arabidopsis thaliana OX=3702 GN=PIN5 PE=2 SV...	[more]
Q5JLM1	1.3e-27	36.44	Probable auxin efflux carrier component 5a OS=Oryza sativa subsp. japonica OX=39...	[more]
D5A7J3	3.0e-21	31.69	Probable auxin efflux carrier component 5b OS=Oryza sativa subsp. japonica OX=39...	[more]
Q6ZIB5	6.7e-21	29.66	Probable auxin efflux carrier component 5c OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8RWZ6	7.4e-20	35.81	Auxin efflux carrier component 4 OS=Arabidopsis thaliana OX=3702 GN=PIN4 PE=1 SV...	[more]

BLAST of Sed0018806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBZ5	1.3e-40	44.07	Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111444027 PE=...	[more]
A0A6J1HQQ5	6.6e-40	43.64	Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111465776 PE=3 ...	[more]
A0A6J1D820	2.8e-38	41.95	Auxin efflux carrier component OS=Momordica charantia OX=3673 GN=LOC111018220 PE...	[more]
A0A3P6AAR9	4.5e-36	38.70	Auxin efflux carrier component OS=Brassica oleracea OX=3712 GN=BOLC3T13401H PE=3...	[more]
A0A0D3B1H7	4.5e-36	38.70	Auxin efflux carrier component OS=Brassica oleracea var. oleracea OX=109376 GN=1...	[more]

BLAST of Sed0018806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16530.1	4.7e-38	39.57	Auxin efflux carrier family protein	[more]
AT2G01420.1	5.2e-21	35.81	Auxin efflux carrier family protein	[more]
AT2G01420.2	5.2e-21	35.81	Auxin efflux carrier family protein	[more]
AT1G73590.1	8.9e-21	35.14	Auxin efflux carrier family protein	[more]
AT1G70940.1	3.4e-20	33.11	Auxin efflux carrier family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 7..224 e-value: 2.4E-30 score: 105.2
None	No IPR available	PANTHER	PTHR31752	AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED	coord: 2..226
None	No IPR available	PANTHER	PTHR31752:SF2	AUXIN EFFLUX CARRIER COMPONENT 5	coord: 2..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018806.1	Sed0018806.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060918	auxin transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane