Sed0018751 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAAGTGGCACTTAAAAATGATTGTACGCAACTTTCATTAAACCCCAAACCCCAAACCCAGAACCCTCGACTTCAGACTTCTACTTCTCTTTCTCTATGTCTCGCCTCAGAATCGTTCATCGTCGAAACGATTCCTTCTCGGAACTCCGAAATCATCTCTTCAGTTCACGATCTACGAATTCCCTCCAATTTCATTCGATTCCTTCCACTTCTCGAAGATCTCGAACATTGTCGCCGGAAATCGAAGACGGAACCGGACCAGAAAGTGCGGGCAAAAAGAGGATTACACGTTCTGGTTTTCTGGCTAATGAAGCCGCAAAATCGAATGGAAGTGTGAGATCTGGCGATGGCGAAAGTAGAAATGGTAACACTGTGCTGAAAGGAAGAGAGAAATTGACGAGGGAGGAAGCTTTGGTCCGTAAGGAGCTTTCTCCGGATATGGAGATGTTCGTGAGACATTTGTACAGGGATGGATACTTTAATTATGCGAGTTTCTTGCCTGATAACAAACTTATTCTTAGCTACTTTGAGTTTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGAAGAGACAATCAAGAAATTGCAAAGTAAGAAATGTTTTGAATCCAGTCATATGTGTGCTTAATCTTATGGATTTTGATCTTTGATGCGTTAATATTGATTGCTCTGTTTCGTCTTTGTGTATTTTTTTAGAATTGGTGTGGGGAGTTTATGTGTTCAATGAACTTGATAGCTTTTAGGGTGTGTTTGGAGCACCGGTTTGGTTATGATAAACGGTGGGTTATTATAAATGGTGTTTTGGGGGTAAGTTATTATAACATGGATTATGCAACCAAAAGTAATATATGTAAGGTTTAGATAAACGGGCACGGTGGTTTAGGTAACCACCGTTTATAATGAACAGTAGGGCAAACATCAGTTGAGTTATTATAACCAACACGGCCGTTTACATAAGCGGGGGCCCAAACACACTTGGTCTTTTTCCAACAGCAATTTGGCCTGTGAAGTATTAGAATAAGAAATTTGAAGATATTGTGAGTGGAAGAATAAACTATATCTCATCTAATATAAGGGCCAAAATTATTATTGTTTTGATTTCATGCTTGTATGTCATTTAATGGAAGTTTAGCCAGTGGAAATGTGAATCTACCGGAATAAGTTATGATGAACGAATCAAGTCTATATTTTAGCTTGTGCATTGACATGGAAAAACGATCCTTAGTTCTTGTTTTGAGCTTTTTCATAATATGCTCTTATGTACCTTGTGCTAATTAGGACAAAGAAGACATTGAAGGAATTTGTTTGACTTGAGAATGGAGTGTGTTGATGTTGGTTTTGAAAATAAGAAACTGTTTGTTGGTTTCTGTTGGCATTAGATTACTCCCAACTATATTTTGTATCATAAATCATAAATGTAAATATTATAGTATGAATCATTCTTAGATGTATTATTTTGATACTTAAGAGTATGAAAGATATGAAACAGTATTTCGGGTTCATGCACAAAAGGACCATGACCAAAATCAAAAGTTTTGACCTATTGATAAAGAGGGTTTTGGAGTTTGGAGAACTAAGAGTGACAATCAAATATAGTAGAGTCAAAGATGAGTCTAATAAGAATAGTTGAGGTATGCACATAGTGACCAAGACACTCGCTGATATACAAAAATCATAGCTTACAGTATTCAAATATATGGAATGCTTGTTGCTATTACTATTTTGTAACTAATGTTTTTTTTTTGCTTGGTTGGTTGGTTGGTTTATTCAGTTGGTTCTGTTTTAAAAAATTATTGTATTTTTTATATCTCTCTATAGTCAGTTGATTGTCGATATTCATCTACAAATCTATGAACACATGAATTGGTTGAGGGTAGTAACCCTCCACCAAAATGATATTCATCTTAAACACAACTTACCTCAGTGGACCTCTAGTGCTAATTGTACTGTGCATACTGAACACTGTACTGGAAGCCTTTGCGCTTGTGATTCAGTTTTTCTGCTGCTTTAATTTTGCTTGAAGCTTTATGCTACTGATAATTTTAAGATTGTACAAGATATTGACGCGTCAAATTATACAGAGTATACTTTAGTGCTCAAGTGTAATATTCCTAATAAGATACAAAATCTAACATTTCAGGAAACAATTTCTTCTATTCCATCTTTCTGGTTTGGGCAGTTGTGTTTCATTATGAAGACATCTACCTACTGTTTCACATCTTGAACACTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAAAGAGGTTGCCTCCTTTGGATGCCCGTCCACTGCAAGAAAAGATGTTTTCGCTGCTAAACGACTGCGGAAATTTTTTAGAATCCAAGAAGACACAGTAAGCAAAAACTCAGAATATATACATTCCTACTTTTCTTTCCATTTAAACATTCAGCAACATATTTATGCTTTATTTTCTTCCTCTTCAAATTATTCTCAGGTTTGTCACAAATGCATCTTGAGACCATCATGCAAGTATGTAAATCAAGGTGTTTGGAACTGCGGCACCAATAATTTGAATTTGGCAGTCGTTATGCAGGTTATTACTCAATACAGCTTGGAAGCTATACCAAAACAACTTGTAATTCCTGAAGATATAAAGGCTTCTGTTAGCCGAATACTAAAAGAGGTACTGAAACTAAGCCCGACCGTGTCGAGGAACTAGTTTTCATCGCAACAATGCAAGTTCTCTTCAGTAAAAGCAAAAACCCTTGAGGTGATCAACTCTATAGTATCCTAGAAAACCTGGTTTGGTCTTCCATGTGCTGTGGAACCATCAGTGCAATTAACTTGTTCATATGCAACATGGTGAGCTTCTGAGCGGTAAAGTATGTAGTGTTTCCTCGATTGATATGCATGATTCTGAGTGTCTCAGCTTGCTTCATCTTGTCACATTGATATAGAACCTGAAAATTCACTCTTATTTATTATGTACCTGATTAGCTATGCTTTAGTTCACAATTTTCTCACATTATGG AATTAAGTGGCACTTAAAAATGATTGTACGCAACTTTCATTAAACCCCAAACCCCAAACCCAGAACCCTCGACTTCAGACTTCTACTTCTCTTTCTCTATGTCTCGCCTCAGAATCGTTCATCGTCGAAACGATTCCTTCTCGGAACTCCGAAATCATCTCTTCAGTTCACGATCTACGAATTCCCTCCAATTTCATTCGATTCCTTCCACTTCTCGAAGATCTCGAACATTGTCGCCGGAAATCGAAGACGGAACCGGACCAGAAAGTGCGGGCAAAAAGAGGATTACACGTTCTGGTTTTCTGGCTAATGAAGCCGCAAAATCGAATGGAAGTGTGAGATCTGGCGATGGCGAAAGTAGAAATGGTAACACTGTGCTGAAAGGAAGAGAGAAATTGACGAGGGAGGAAGCTTTGGTCCGTAAGGAGCTTTCTCCGGATATGGAGATGTTCGTGAGACATTTGTACAGGGATGGATACTTTAATTATGCGAGTTTCTTGCCTGATAACAAACTTATTCTTAGCTACTTTGAGTTTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGAAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAAAGAGGTTGCCTCCTTTGGATGCCCGTCCACTGCAAGAAAAGATGTTTTCGCTGCTAAACGACTGCGGAAATTTTTTAGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACCATCATGCAAGTATGTAAATCAAGGTGTTTGGAACTGCGGCACCAATAATTTGAATTTGGCAGTCGTTATGCAGGTTATTACTCAATACAGCTTGGAAGCTATACCAAAACAACTTGTAATTCCTGAAGATATAAAGGCTTCTGTTAGCCGAATACTAAAAGAGGTACTGAAACTAAGCCCGACCGTGTCGAGGAACTAGTTTTCATCGCAACAATGCAAGTTCTCTTCAGTAAAAGCAAAAACCCTTGAGGTGATCAACTCTATAGTATCCTAGAAAACCTGGTTTGGTCTTCCATGTGCTGTGGAACCATCAGTGCAATTAACTTGTTCATATGCAACATGGTGAGCTTCTGAGCGGTAAAGTATGTAGTGTTTCCTCGATTGATATGCATGATTCTGAGTGTCTCAGCTTGCTTCATCTTGTCACATTGATATAGAACCTGAAAATTCACTCTTATTTATTATGTACCTGATTAGCTATGCTTTAGTTCACAATTTTCTCACATTATGG ATGTCTCGCCTCAGAATCGTTCATCGTCGAAACGATTCCTTCTCGGAACTCCGAAATCATCTCTTCAGTTCACGATCTACGAATTCCCTCCAATTTCATTCGATTCCTTCCACTTCTCGAAGATCTCGAACATTGTCGCCGGAAATCGAAGACGGAACCGGACCAGAAAGTGCGGGCAAAAAGAGGATTACACGTTCTGGTTTTCTGGCTAATGAAGCCGCAAAATCGAATGGAAGTGTGAGATCTGGCGATGGCGAAAGTAGAAATGGTAACACTGTGCTGAAAGGAAGAGAGAAATTGACGAGGGAGGAAGCTTTGGTCCGTAAGGAGCTTTCTCCGGATATGGAGATGTTCGTGAGACATTTGTACAGGGATGGATACTTTAATTATGCGAGTTTCTTGCCTGATAACAAACTTATTCTTAGCTACTTTGAGTTTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGAAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAAAGAGGTTGCCTCCTTTGGATGCCCGTCCACTGCAAGAAAAGATGTTTTCGCTGCTAAACGACTGCGGAAATTTTTTAGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACCATCATGCAAGTATGTAAATCAAGGTGTTTGGAACTGCGGCACCAATAATTTGAATTTGGCAGTCGTTATGCAGGTTATTACTCAATACAGCTTGGAAGCTATACCAAAACAACTTGTAATTCCTGAAGATATAAAGGCTTCTGTTAGCCGAATACTAAAAGAGGTACTGAAACTAAGCCCGACCGTGTCGAGGAACTAG MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGKKRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVRHLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVASFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVMQVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN Homology
BLAST of Sed0018751 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 418.7 bits (1075), Expect = 4.0e-113 Identity = 218/282 (77.30%), Postives = 244/282 (86.52%), Query Frame = 0
BLAST of Sed0018751 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 418.7 bits (1075), Expect = 4.0e-113 Identity = 218/282 (77.30%), Postives = 244/282 (86.52%), Query Frame = 0
BLAST of Sed0018751 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata]) HSP 1 Score: 416.4 bits (1069), Expect = 2.0e-112 Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 0
BLAST of Sed0018751 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 414.1 bits (1063), Expect = 9.8e-112 Identity = 216/282 (76.60%), Postives = 242/282 (85.82%), Query Frame = 0
BLAST of Sed0018751 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima]) HSP 1 Score: 411.8 bits (1057), Expect = 4.9e-111 Identity = 215/282 (76.24%), Postives = 241/282 (85.46%), Query Frame = 0
BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 9.6e-113 Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 0
BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.4e-111 Identity = 215/282 (76.24%), Postives = 241/282 (85.46%), Query Frame = 0
BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 8.4e-101 Identity = 202/288 (70.14%), Postives = 234/288 (81.25%), Query Frame = 0
BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 8.7e-98 Identity = 194/268 (72.39%), Postives = 221/268 (82.46%), Query Frame = 0
BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.5e-68 Identity = 147/264 (55.68%), Postives = 176/264 (66.67%), Query Frame = 0
BLAST of Sed0018751 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 180.3 bits (456), Expect = 2.2e-45 Identity = 90/186 (48.39%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of Sed0018751 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11 Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 0
BLAST of Sed0018751 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09 Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 0
BLAST of Sed0018751 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09 Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 0
BLAST of Sed0018751 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08 Identity = 35/107 (32.71%), Postives = 50/107 (46.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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