Sed0018751 (gene) Chayote v1

Overview
NameSed0018751
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRan BP2/NZF zinc finger-like superfamily protein
LocationLG04: 37880069 .. 37883086 (+)
RNA-Seq ExpressionSed0018751
SyntenySed0018751
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAAGTGGCACTTAAAAATGATTGTACGCAACTTTCATTAAACCCCAAACCCCAAACCCAGAACCCTCGACTTCAGACTTCTACTTCTCTTTCTCTATGTCTCGCCTCAGAATCGTTCATCGTCGAAACGATTCCTTCTCGGAACTCCGAAATCATCTCTTCAGTTCACGATCTACGAATTCCCTCCAATTTCATTCGATTCCTTCCACTTCTCGAAGATCTCGAACATTGTCGCCGGAAATCGAAGACGGAACCGGACCAGAAAGTGCGGGCAAAAAGAGGATTACACGTTCTGGTTTTCTGGCTAATGAAGCCGCAAAATCGAATGGAAGTGTGAGATCTGGCGATGGCGAAAGTAGAAATGGTAACACTGTGCTGAAAGGAAGAGAGAAATTGACGAGGGAGGAAGCTTTGGTCCGTAAGGAGCTTTCTCCGGATATGGAGATGTTCGTGAGACATTTGTACAGGGATGGATACTTTAATTATGCGAGTTTCTTGCCTGATAACAAACTTATTCTTAGCTACTTTGAGTTTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGAAGAGACAATCAAGAAATTGCAAAGTAAGAAATGTTTTGAATCCAGTCATATGTGTGCTTAATCTTATGGATTTTGATCTTTGATGCGTTAATATTGATTGCTCTGTTTCGTCTTTGTGTATTTTTTTAGAATTGGTGTGGGGAGTTTATGTGTTCAATGAACTTGATAGCTTTTAGGGTGTGTTTGGAGCACCGGTTTGGTTATGATAAACGGTGGGTTATTATAAATGGTGTTTTGGGGGTAAGTTATTATAACATGGATTATGCAACCAAAAGTAATATATGTAAGGTTTAGATAAACGGGCACGGTGGTTTAGGTAACCACCGTTTATAATGAACAGTAGGGCAAACATCAGTTGAGTTATTATAACCAACACGGCCGTTTACATAAGCGGGGGCCCAAACACACTTGGTCTTTTTCCAACAGCAATTTGGCCTGTGAAGTATTAGAATAAGAAATTTGAAGATATTGTGAGTGGAAGAATAAACTATATCTCATCTAATATAAGGGCCAAAATTATTATTGTTTTGATTTCATGCTTGTATGTCATTTAATGGAAGTTTAGCCAGTGGAAATGTGAATCTACCGGAATAAGTTATGATGAACGAATCAAGTCTATATTTTAGCTTGTGCATTGACATGGAAAAACGATCCTTAGTTCTTGTTTTGAGCTTTTTCATAATATGCTCTTATGTACCTTGTGCTAATTAGGACAAAGAAGACATTGAAGGAATTTGTTTGACTTGAGAATGGAGTGTGTTGATGTTGGTTTTGAAAATAAGAAACTGTTTGTTGGTTTCTGTTGGCATTAGATTACTCCCAACTATATTTTGTATCATAAATCATAAATGTAAATATTATAGTATGAATCATTCTTAGATGTATTATTTTGATACTTAAGAGTATGAAAGATATGAAACAGTATTTCGGGTTCATGCACAAAAGGACCATGACCAAAATCAAAAGTTTTGACCTATTGATAAAGAGGGTTTTGGAGTTTGGAGAACTAAGAGTGACAATCAAATATAGTAGAGTCAAAGATGAGTCTAATAAGAATAGTTGAGGTATGCACATAGTGACCAAGACACTCGCTGATATACAAAAATCATAGCTTACAGTATTCAAATATATGGAATGCTTGTTGCTATTACTATTTTGTAACTAATGTTTTTTTTTTGCTTGGTTGGTTGGTTGGTTTATTCAGTTGGTTCTGTTTTAAAAAATTATTGTATTTTTTATATCTCTCTATAGTCAGTTGATTGTCGATATTCATCTACAAATCTATGAACACATGAATTGGTTGAGGGTAGTAACCCTCCACCAAAATGATATTCATCTTAAACACAACTTACCTCAGTGGACCTCTAGTGCTAATTGTACTGTGCATACTGAACACTGTACTGGAAGCCTTTGCGCTTGTGATTCAGTTTTTCTGCTGCTTTAATTTTGCTTGAAGCTTTATGCTACTGATAATTTTAAGATTGTACAAGATATTGACGCGTCAAATTATACAGAGTATACTTTAGTGCTCAAGTGTAATATTCCTAATAAGATACAAAATCTAACATTTCAGGAAACAATTTCTTCTATTCCATCTTTCTGGTTTGGGCAGTTGTGTTTCATTATGAAGACATCTACCTACTGTTTCACATCTTGAACACTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAAAGAGGTTGCCTCCTTTGGATGCCCGTCCACTGCAAGAAAAGATGTTTTCGCTGCTAAACGACTGCGGAAATTTTTTAGAATCCAAGAAGACACAGTAAGCAAAAACTCAGAATATATACATTCCTACTTTTCTTTCCATTTAAACATTCAGCAACATATTTATGCTTTATTTTCTTCCTCTTCAAATTATTCTCAGGTTTGTCACAAATGCATCTTGAGACCATCATGCAAGTATGTAAATCAAGGTGTTTGGAACTGCGGCACCAATAATTTGAATTTGGCAGTCGTTATGCAGGTTATTACTCAATACAGCTTGGAAGCTATACCAAAACAACTTGTAATTCCTGAAGATATAAAGGCTTCTGTTAGCCGAATACTAAAAGAGGTACTGAAACTAAGCCCGACCGTGTCGAGGAACTAGTTTTCATCGCAACAATGCAAGTTCTCTTCAGTAAAAGCAAAAACCCTTGAGGTGATCAACTCTATAGTATCCTAGAAAACCTGGTTTGGTCTTCCATGTGCTGTGGAACCATCAGTGCAATTAACTTGTTCATATGCAACATGGTGAGCTTCTGAGCGGTAAAGTATGTAGTGTTTCCTCGATTGATATGCATGATTCTGAGTGTCTCAGCTTGCTTCATCTTGTCACATTGATATAGAACCTGAAAATTCACTCTTATTTATTATGTACCTGATTAGCTATGCTTTAGTTCACAATTTTCTCACATTATGG

mRNA sequence

AATTAAGTGGCACTTAAAAATGATTGTACGCAACTTTCATTAAACCCCAAACCCCAAACCCAGAACCCTCGACTTCAGACTTCTACTTCTCTTTCTCTATGTCTCGCCTCAGAATCGTTCATCGTCGAAACGATTCCTTCTCGGAACTCCGAAATCATCTCTTCAGTTCACGATCTACGAATTCCCTCCAATTTCATTCGATTCCTTCCACTTCTCGAAGATCTCGAACATTGTCGCCGGAAATCGAAGACGGAACCGGACCAGAAAGTGCGGGCAAAAAGAGGATTACACGTTCTGGTTTTCTGGCTAATGAAGCCGCAAAATCGAATGGAAGTGTGAGATCTGGCGATGGCGAAAGTAGAAATGGTAACACTGTGCTGAAAGGAAGAGAGAAATTGACGAGGGAGGAAGCTTTGGTCCGTAAGGAGCTTTCTCCGGATATGGAGATGTTCGTGAGACATTTGTACAGGGATGGATACTTTAATTATGCGAGTTTCTTGCCTGATAACAAACTTATTCTTAGCTACTTTGAGTTTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGAAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAAAGAGGTTGCCTCCTTTGGATGCCCGTCCACTGCAAGAAAAGATGTTTTCGCTGCTAAACGACTGCGGAAATTTTTTAGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACCATCATGCAAGTATGTAAATCAAGGTGTTTGGAACTGCGGCACCAATAATTTGAATTTGGCAGTCGTTATGCAGGTTATTACTCAATACAGCTTGGAAGCTATACCAAAACAACTTGTAATTCCTGAAGATATAAAGGCTTCTGTTAGCCGAATACTAAAAGAGGTACTGAAACTAAGCCCGACCGTGTCGAGGAACTAGTTTTCATCGCAACAATGCAAGTTCTCTTCAGTAAAAGCAAAAACCCTTGAGGTGATCAACTCTATAGTATCCTAGAAAACCTGGTTTGGTCTTCCATGTGCTGTGGAACCATCAGTGCAATTAACTTGTTCATATGCAACATGGTGAGCTTCTGAGCGGTAAAGTATGTAGTGTTTCCTCGATTGATATGCATGATTCTGAGTGTCTCAGCTTGCTTCATCTTGTCACATTGATATAGAACCTGAAAATTCACTCTTATTTATTATGTACCTGATTAGCTATGCTTTAGTTCACAATTTTCTCACATTATGG

Coding sequence (CDS)

ATGTCTCGCCTCAGAATCGTTCATCGTCGAAACGATTCCTTCTCGGAACTCCGAAATCATCTCTTCAGTTCACGATCTACGAATTCCCTCCAATTTCATTCGATTCCTTCCACTTCTCGAAGATCTCGAACATTGTCGCCGGAAATCGAAGACGGAACCGGACCAGAAAGTGCGGGCAAAAAGAGGATTACACGTTCTGGTTTTCTGGCTAATGAAGCCGCAAAATCGAATGGAAGTGTGAGATCTGGCGATGGCGAAAGTAGAAATGGTAACACTGTGCTGAAAGGAAGAGAGAAATTGACGAGGGAGGAAGCTTTGGTCCGTAAGGAGCTTTCTCCGGATATGGAGATGTTCGTGAGACATTTGTACAGGGATGGATACTTTAATTATGCGAGTTTCTTGCCTGATAACAAACTTATTCTTAGCTACTTTGAGTTTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGAAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAAAGAGGTTGCCTCCTTTGGATGCCCGTCCACTGCAAGAAAAGATGTTTTCGCTGCTAAACGACTGCGGAAATTTTTTAGAATCCAAGAAGACACAGTTTGTCACAAATGCATCTTGAGACCATCATGCAAGTATGTAAATCAAGGTGTTTGGAACTGCGGCACCAATAATTTGAATTTGGCAGTCGTTATGCAGGTTATTACTCAATACAGCTTGGAAGCTATACCAAAACAACTTGTAATTCCTGAAGATATAAAGGCTTCTGTTAGCCGAATACTAAAAGAGGTACTGAAACTAAGCCCGACCGTGTCGAGGAACTAG

Protein sequence

MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGKKRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVRHLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVASFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVMQVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN
Homology
BLAST of Sed0018751 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418.7 bits (1075), Expect = 4.0e-113
Identity = 218/282 (77.30%), Postives = 244/282 (86.52%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+ST+SLQFHS+PSTSRRSRT SP+I+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  RS  + N+ A+S GS R+ D   + G    KGREKLTRE+ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRSDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREKLTREDALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           HLYR+GYFNYA+FLPDNKL+LSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDL++VA
Sbjct: 121 HLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPS AR+DVFAAKRLRKFFRIQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           QVITQY L+AIPKQL+IPEDIKASVSR+LKE+LKLSPTVSRN
Sbjct: 241 QVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of Sed0018751 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.7 bits (1075), Expect = 4.0e-113
Identity = 218/282 (77.30%), Postives = 244/282 (86.52%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+S +SLQFHS+PSTSRRSRT SP+I+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSMSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  RS  + N+ A+S GS R+ D   + G    KGREKLTRE+ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRSDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREKLTREDALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           HLYR+GYFNYA+FLPDNKL+LSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDL++VA
Sbjct: 121 HLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           QVITQY L+AIPKQL+IPEDIKASVSR+LKE+LKLSPTVSRN
Sbjct: 241 QVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of Sed0018751 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata])

HSP 1 Score: 416.4 bits (1069), Expect = 2.0e-112
Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+STNSLQFHS+PSTSRRSRT SP+I+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  R   + N+ A+S GS R+ D   + G    KGREKLTRE+ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRLDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREKLTREDALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           HLYR+GYFNYA+FLPDNKL+LSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDL++VA
Sbjct: 121 HLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           QVITQY L+AIPKQL+IPEDIKASVSR+LKE+LKLSPTVSR+
Sbjct: 241 QVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

BLAST of Sed0018751 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.1 bits (1063), Expect = 9.8e-112
Identity = 216/282 (76.60%), Postives = 242/282 (85.82%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+STNSLQFHS+ STSRRSRT  PEI+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSTNSLQFHSLSSTSRRSRTFLPEIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  RS  + N+ A+S GS R+ D   + G    KGREKLTRE+ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRSDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREKLTREDALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           +LYR+GYFNYA+FLPDNKL+LSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDL++VA
Sbjct: 121 YLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           QVITQY L+AIPKQL++PEDIKASVSR+LKE+LKLSPTVSRN
Sbjct: 241 QVITQYDLQAIPKQLIVPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of Sed0018751 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 4.9e-111
Identity = 215/282 (76.24%), Postives = 241/282 (85.46%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+STNSLQFHS+PSTSRRSRT SP+I+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  RS  + N+ A+S GS R+ D   + G    KGRE L RE ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRSDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREILKRENALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           HLYR+GYFNY++FLPDNKL+LSYFE RHGRDFIKSAAERF RDNQEIAKWLSGSDL++VA
Sbjct: 121 HLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           +VITQY L+AIPKQL+IPEDIKASVSR+LKE+LKLSPTVSRN
Sbjct: 241 KVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 9.6e-113
Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+STNSLQFHS+PSTSRRSRT SP+I+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  R   + N+ A+S GS R+ D   + G    KGREKLTRE+ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRLDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREKLTREDALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           HLYR+GYFNYA+FLPDNKL+LSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDL++VA
Sbjct: 121 HLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           QVITQY L+AIPKQL+IPEDIKASVSR+LKE+LKLSPTVSR+
Sbjct: 241 QVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.4e-111
Identity = 215/282 (76.24%), Postives = 241/282 (85.46%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R++HRR D  S+L ++ FSS+STNSLQFHS+PSTSRRSRT SP+I+ G GPE    
Sbjct: 1   MSRFRVLHRRID--SQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGREKLTREEALVRKELSPDMEMFVR 120
           KR  RS  + N+ A+S GS R+ D   + G    KGRE L RE ALVRKELSPDMEMFVR
Sbjct: 61  KRNIRSDSVVNQGARSGGS-RNEDNVLK-GRVDSKGREILKRENALVRKELSPDMEMFVR 120

Query: 121 HLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVA 180
           HLYR+GYFNY++FLPDNKL+LSYFE RHGRDFIKSAAERF RDNQEIAKWLSGSDL++VA
Sbjct: 121 HLYREGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVA 180

Query: 181 SFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVM 240
            FGCPSTAR+DVFAAKRLRKFFRIQEDTVCH C LR SCKYVNQGVWNCGT NLNLAVVM
Sbjct: 181 LFGCPSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM 240

Query: 241 QVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           +VITQY L+AIPKQL+IPEDIKASVSR+LKE+LKLSPTVSRN
Sbjct: 241 KVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 8.4e-101
Identity = 202/288 (70.14%), Postives = 234/288 (81.25%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MSR R +H      S+++  LF+S+ST SLQFH +PST   SR+ S  I +   PE    
Sbjct: 1   MSRFRPLH------SQIQ--LFNSQSTISLQFHLLPST---SRSFSLNIGERIAPEIVPG 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKGR------EKLTREEALVRKELSPD 120
            R T   FL  EAA S+GSV+S +G+ RN  TVLKG+      +KLTRE+AL+RK+LSPD
Sbjct: 61  NRNTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPD 120

Query: 121 MEMFVRHLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGS 180
           MEMFVRHLY++GYFNYA+FLPDNK +LSYFE RHGRDFIKSAA+RFGRDNQEIAKWLSGS
Sbjct: 121 MEMFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGS 180

Query: 181 DLKEVASFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNL 240
           DL++VA FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILR SCKYVNQGVWN  T NL
Sbjct: 181 DLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNL 240

Query: 241 NLAVVMQVITQYSLEAIPKQLVIPEDIKASVSRILKEVLKLSPTVSRN 283
           NL VV+QV TQY+LEAIP+QL+IPED+KASVSR+LKE+L LSPTVSRN
Sbjct: 241 NLGVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 8.7e-98
Identity = 194/268 (72.39%), Postives = 221/268 (82.46%), Query Frame = 0

Query: 21  LFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGKKRITRSGFLANEAAKSNGSV 80
           LF+S+ST SLQFH +PST   SR+ S +I +G  PE    K  T   FL+ EAA SNGSV
Sbjct: 13  LFNSQSTISLQFHLLPST---SRSFSLKIGEGIEPEIVPAKTNTPPAFLSREAANSNGSV 72

Query: 81  RSGDGESRNGNTVLKGR------EKLTREEALVRKELSPDMEMFVRHLYRDGYFNYASFL 140
           +S +G+  N  TVLKG+      +KL RE+AL+RKELSPDMEMF RHLYR+GYFNYA+FL
Sbjct: 73  KSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPDMEMFARHLYREGYFNYANFL 132

Query: 141 PDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVASFGCPSTARKDVFA 200
           P NK +LSYFE R GR+FIKS A+RFGRDNQEIAKWLSGSDL++VA FGCPSTARKDVFA
Sbjct: 133 PVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIAKWLSGSDLRKVALFGCPSTARKDVFA 192

Query: 201 AKRLRKFFRIQEDTVCHKCILRPSCKYVNQGVWNCGTNNLNLAVVMQVITQYSLEAIPKQ 260
           AKRLRKFFRIQEDTVCHKCILR SCKYVNQGVWN  T NLNL VV+QVITQY+LEAIP+Q
Sbjct: 193 AKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVITQYALEAIPEQ 252

Query: 261 LVIPEDIKASVSRILKEVLKLSPTVSRN 283
           L+IPEDIKASVSR+LKE+L LS TVSRN
Sbjct: 253 LIIPEDIKASVSRLLKEILNLSQTVSRN 277

BLAST of Sed0018751 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.5e-68
Identity = 147/264 (55.68%), Postives = 176/264 (66.67%), Query Frame = 0

Query: 1   MSRLRIVHRRNDSFSELRNHLFSSRSTNSLQFHSIPSTSRRSRTLSPEIEDGTGPESAGK 60
           MS+ R +HR  DS+ +LR H F S+S++SLQ H++ S SRR+R  S +IE+G GPE    
Sbjct: 1   MSQFRALHRHIDSYLKLRYHFFCSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60

Query: 61  KRITRSGFLANEAAKSNGSVRSGDGESRNGNTVLKG------------------------ 120
            R  R+ F+ + A +SN S    + E RN + VL+G                        
Sbjct: 61  NRDIRTDFVVDGAVRSNRSAECRERERRNQDNVLEGSSGESERGAGWLRADSGGSGKLTR 120

Query: 121 --------------------REKLTREEALVRKELSPDMEMFVRHLYRDGYFNYASFLPD 180
                               RE   RE+ALVRKELSPD+EM VRHLY +GYF+YA+FLPD
Sbjct: 121 KGKPGSLYVLVSKQNGCTERREVRMREDALVRKELSPDIEMLVRHLYGEGYFSYANFLPD 180

Query: 181 NKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVASFGCPSTARKDVFAAK 221
           NKL+LSYFE+RHGRDFIKSAAERFGRDNQEIAKWLSGSDL++VA  GCPSTARKDVF+AK
Sbjct: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 240

BLAST of Sed0018751 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). )

HSP 1 Score: 180.3 bits (456), Expect = 2.2e-45
Identity = 90/186 (48.39%), Postives = 126/186 (67.74%), Query Frame = 0

Query: 94  LKGREKLTREEALVRKELSPDMEMFVRHLYRDGYFNYASFLPDNKLILSYFEFRHGRDFI 153
           +K   K   +   V KEL  +M  FVR L+++GY N A+F+   KL +   +  + R F+
Sbjct: 124 VKKHSKEKEDVIRVYKELPIEMVSFVRLLHKEGYLNKANFITGEKLDMGNLDEEYARTFV 183

Query: 154 KSAAERFGRDNQEIAKWLSGSDLKEVASFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKC 213
           K AAERFG+D QEIAKWLSGSDLK++  FGCPS  ++ VFAAK LR FF I E+ VC KC
Sbjct: 184 KFAAERFGKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKC 243

Query: 214 ILRPSCKYVNQGVWNCGTNNLNLAVVMQVITQYSLEAIPKQLVIPEDIKASVSRILKEVL 273
           +L+  CK+ NQ VW+  T +L+L+VVM+VIT Y L+    +L +P++++ SVSR+L E+ 
Sbjct: 244 VLKEKCKFPNQSVWDGKTKHLHLSVVMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEIQ 303

Query: 274 KLSPTV 280
            LS T+
Sbjct: 304 NLSRTI 309

BLAST of Sed0018751 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11
Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 0

Query: 153 IKSAAERFGRDNQEIAKWLSGSDLKEVASFGCPSTARKDVFAAKRLRKFFRIQEDTVCHK 212
           +++A   FG+D  +I + LS +D++ +   GCP+T RK VF+ K LRK   + E  VC  
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 213 CILRPSCKYVNQGVWNCGTNNLNLAVVMQVITQYSLEAI-----PKQLVIPEDIKASVSR 272
           C LR SC+     +     +      +M+++  Y  + +      K L+  + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 273 ILKEVLKLS 277
           +L E++KLS
Sbjct: 326 LLHEIVKLS 332

BLAST of Sed0018751 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09
Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 0

Query: 122 LYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVAS 181
           L + GYF   S +P    ++S  E  H    I++A   F R    + + LS  D+K +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 182 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSC-KYVNQGVWNCGTNNLNLAVVM 241
            GCPST RK V + KRLR +  I E  VC  C LR  C +   Q   + G   ++   VM
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 242 QVITQYSLEAIPK-------QLVIPEDIKASVSRILKEVLKLSPT 279
           +++  Y L++I         Q  + ED   SV ++L+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVED---SVRKLLRESVAYSLT 205

BLAST of Sed0018751 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09
Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 0

Query: 122 LYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLSGSDLKEVAS 181
           L + GYF   S +P    ++S  E  H    I++A   F R    + + LS  D+K +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 182 FGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSC-KYVNQGVWNCGTNNLNLAVVM 241
            GCPST RK V + KRLR +  I E  VC  C LR  C +   Q   + G   ++   VM
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 242 QVITQYSLEAIPK-------QLVIPEDIKASVSRILKEVLKLSPT 279
           +++  Y L++I         Q  + ED   SV ++L+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVED---SVRKLLRESVAYSLT 205

BLAST of Sed0018751 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08
Identity = 35/107 (32.71%), Postives = 50/107 (46.73%), Query Frame = 0

Query: 113 PDMEMFVRHLYRDGYFNYASFLPDNKLILSYFEFRHGRDFIKSAAERFGRDNQEIAKWLS 172
           P+   FV  L   GYF       D +    Y E       +K A   F RD  ++ + LS
Sbjct: 63  PEWITFVDRLKTKGYFT-----KDTEDDTVYQEM----ILVKDACLSFARDRYDVLRSLS 122

Query: 173 GSDLKEVASFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRPSC 220
             D++ +   GCP+  RK V ++KR+R   ++ E  VC  C LR SC
Sbjct: 123 SGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSC 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6591767.14.0e-11377.30hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7024649.14.0e-11377.30hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022935982.12.0e-11276.95uncharacterized protein LOC111442720 [Cucurbita moschata][more]
XP_023536478.19.8e-11276.60uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo][more]
XP_022976827.14.9e-11176.24uncharacterized protein LOC111477088 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1F7479.6e-11376.95uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC1114427... [more]
A0A6J1IGS82.4e-11176.24uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088... [more]
A0A0A0L4J98.4e-10170.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1[more]
A0A5A7VHD08.7e-9872.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CC235.5e-6855.68uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
Match NameE-valueIdentityDescription
AT1G53460.12.2e-4548.39BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfa... [more]
AT1G55040.12.7e-1130.23zinc finger (Ran-binding) family protein [more]
AT1G70650.12.0e-0932.73Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G70650.22.0e-0932.73Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G48570.12.2e-0832.71zinc finger (Ran-binding) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..93
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 61..275
NoneNo IPR availablePANTHERPTHR23111:SF24OS01G0203300 PROTEINcoord: 61..275

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018751.1Sed0018751.1mRNA