Sed0018734 (gene) Chayote v1

Overview


Name	Sed0018734
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein LIKE COV 1-like isoform X1
Location	LG13: 21814987 .. 21818352 (-)
RNA-Seq Expression	Sed0018734
Synteny	Sed0018734

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGCGAAAAATGTGATTCCAAAATCAAAGAAACAGAAACAAAGAAAAAAGAATGAGTTCAAGAGAAAGGGAAAGAGATCTCGAGCTTCTGATCCCAGTCGCTGCAGTTTCTGAAAATGGAGCCTCCAAATCTTCTTCCGTACCCGCTGCCGCTTTGTCTCATCATCACTCCGGCCGCGAGGTCAGTTTTCGCTCCATTCTCTTCGTCATTAACGTTAATCTCTTCCGTTTTTCCACTGAATTTTAATTGTATTTGTATTCGAGATTGTTCTTCCATTTTCTGCCGTGATTTCTTACTCTGTAATGGTTGAAATCGACTTAGCTGTGTATAACAGTGCTGGATTCACTTAATTGAGGCGATTTTCTACGAACGCGGCGTTGTTTTGTACTCTTTACTGGTCTTATTCGTTAATCTCTTCTTTTATCTGTATTCCAGATTGTTCTTCAATTTTCTGGCGCGGTTTCTTACTCTGAAATGGTTGAGATCGACTTAACTGTGTTTAAGAGTGCTAGATTCACTTAATTGAGGCGATTATCGACGAAATCAGCGTTTTTTGTGCTTTTAACTAGTTTTATTGGTTGATCTCTTCTTGTTTTTTCCAGTGAATTTTAATTATATTTGTATTCGAGATTGTTTTTTATTTTCTGCCGCGATTTCTTACTTTGTAATGGTTGAAATCGACTTAGCTGTGTTTAAGAGTGTTGGATTCACTTAATTGAGGCGATTTTCGACTAACGCTGCGTTTTTCTGTACCGTTTACTGGTTTGATTCCTTAATCGCTGACTCTGAAGCTTTGGTTCATGGATTTCTTAGGCACTTGCTAAAGTCATTCGCAGCTGGGCGTCGAAGAAGTTCATGACAGGATGGTAATTCTTTTGGTTTCCTTTGAAGATATTCTTCGGTTGCGTTATGGTGTTATTTTTCTGGAATAAATGCATTTTTTTAGTCTGTTTAATTCTACCAATCTGCTGGTGTTATGAATTTATTCATGATTGTGAAATCATATTTCATTTTCTTGTGTAATTATGAGATGATTAGTAGACTTTCTGATTTGAAAAATAAAAAATCGCAATCAAGAATTAAAAATAAAGGTGCGATAAAAGGTACACATATTTACATACTTACGTGGTTCACAAACTTTATCTTAACTATGTCCATGGATAGAACAGAGAAAGCATTTCATTTACTAAGATCGTATTCGACGAAATGGCCAAGGAGTTTCAATGGAGTTTATTTAGCCCAAGATATATAAAAGTACAATACTAAGCATATAAATCCCAATTACATGCATATTCTAAATATAAAGCCTAATATAGCATATGATATGACCGGACAACAAAACCCCCATACTGAATATTTGTAGCGCAACATAGTTCAAGATATTTCAACATTTTCAGATATGCGAAGTTTGTTTAGCGACTGTTTTCTCTGGTATACTTCAGGATCAAGAGATATTTGTAGTTACTTTACAGGATGGCTTTTGTTTATAGACTATGGCTTAAAATGTGCACTGTTGATTCTTAGCTTATGGGGGTTTGTTTGCAGTGTAATTCTTCTACCAATTGCTATTACATTCTACATCACGTGGGGCTTCATTCGTTTTGTTGATGGCTTTTTCTCTCCCATATATAATCACTTAGGGATCAATATTTTTGGTGAGTTAAAGATTTACTCTGCCCTTTAAAGACCAGAAGAACAACTTTTAATGGATTTTTAGCGGTTGATATTCAGTAGAAATTTCTGCATACAGGGCTTGGATTTATTACCTCCATCACATTCATCTTCCTTGTTGGTATCTTCATGTCATCATGGTTGGGAGCTTCTGTTCTTACTCTTGGAGAATGGTTCATAAAGAAAATGCCACTTGTAAGCTATATTTACGCGGCCTCAAAGCAAATTAGTACTGCAATATCACCTGGTAAGTGAAGGCATTAAATTGTTCTAATTTCCATCCATTTATACAAGGGGATTTTTCACTGATAGAAAATTATATGCTATAAATGAATTATTTTAGAAATTGTATTGTAAATATAATACAAGAGCTAGAATGTGCTGTTGAGAGTAAATTTCATTTACATAACGGTATTTGACTCTATCTCATAATCGCTCTCAGATCAAACTTCAAATGCGTTCAAGGAAGTAGCAATTATCAGGCACCCTCGTGCAGGGGAATACGCTTTCGGATTCATCACTTCCTCTGTTGTTCTTCAGAGCAGCATGGAAGAGGAAGAACTGTATTGTGTTTATGTGCCTACCAATCATCTCTATCTTGGAGACATAGTTCTTATGAATCCCAAGGACATTTTGAGGCCTAATCTGTCTGTCCGTGAAGGAATTGGTATGATCTCTCCCACTAAATGAGAAACCATTTTAACATTAGTATTTGTCTATTGGAAAAAGCCAATTATCCCACTAAAAGATCATTCATTTGAATATTAGTCTTTTTCTCTTGGAAAGAGCTCAGGGTAGTTAGTTATGAACTGGACTTAGATTCCTCTAACATGATAATTAGTTCTTACCCTAACCATTAGTTAAGTGATTAAAACATATATCATCAAACAAAAGGGTTGAGAGTTTCAAATTTCCACCTTCAAATCAGGAAGTCCAGCAAGTACTCTAGTCATGTGTTGGGTATCATGCCTCACAAGTTGATAAGCAAAATCTTAATAATGAGTACATATGTTGGATCTAATCATCATGCAGTAATTCAAGTGATCAAAGAGAGCCTTAAAAATCTAAGAGGTAATGAGTTCAATCTATAGTGGTCATCTACTTAAAAATTAATTTTCTACCAATTTTTTTGACAGACAAATATTATAGAGTCGATGGTCTATCCCATGAAAACAGTCGGACTGCGAGTAAATTGGCCCAGACGTTGGACCTAGTGTTAAAATGTTACATCACCAGTATGACTGTAAATCTTAATGATAATTAGTTGATATAGTGGACCTTATGTTAATATTTAAACTCACATAAGCTGAAGAATGTGAAGAATCTCTTGCAATATATTTATTATGAACATGGGGTTGGATATTTCTTTTTTGGGTGCAGAAATTGTGATCTCTGGAGGTTTGTCAGTACCTCAACTACTGACCACAGTGGATGCAAGAGTAATTCCAGCAGGTGGAATTGAAAAACTCTGCAAAACCAAAAGTAGTATGGTATGATTGGTGAGTGAAAAATGGAAAAACTTTTTCAGTTTGTCAAATTAGAATGGCATTCAACTGAATCTGCAGCAGCTATAAATGGAGCAAACTCTTGCAGAGATTATTTGGTGGAGCTGCAAATTTTAGGTAGCTCAAAAGTTCTTAACAGGAACAAATATTGCCAAACATTATACTTTTCTTCAAAGCTTTCACTTTTTG

mRNA sequence

GCAGCGAAAAATGTGATTCCAAAATCAAAGAAACAGAAACAAAGAAAAAAGAATGAGTTCAAGAGAAAGGGAAAGAGATCTCGAGCTTCTGATCCCAGTCGCTGCAGTTTCTGAAAATGGAGCCTCCAAATCTTCTTCCGTACCCGCTGCCGCTTTGTCTCATCATCACTCCGGCCGCGAGGCACTTGCTAAAGTCATTCGCAGCTGGGCGTCGAAGAAGTTCATGACAGGATGTGTAATTCTTCTACCAATTGCTATTACATTCTACATCACGTGGGGCTTCATTCGTTTTGTTGATGGCTTTTTCTCTCCCATATATAATCACTTAGGGATCAATATTTTTGGGCTTGGATTTATTACCTCCATCACATTCATCTTCCTTGTTGGTATCTTCATGTCATCATGGTTGGGAGCTTCTGTTCTTACTCTTGGAGAATGGTTCATAAAGAAAATGCCACTTGTAAGCTATATTTACGCGGCCTCAAAGCAAATTAGTACTGCAATATCACCTGATCAAACTTCAAATGCGTTCAAGGAAGTAGCAATTATCAGGCACCCTCGTGCAGGGGAATACGCTTTCGGATTCATCACTTCCTCTGTTGTTCTTCAGAGCAGCATGGAAGAGGAAGAACTGTATTGTGTTTATGTGCCTACCAATCATCTCTATCTTGGAGACATAGTTCTTATGAATCCCAAGGACATTTTGAGGCCTAATCTGTCTGTCCGTGAAGGAATTGAAATTGTGATCTCTGGAGGTTTGTCAGTACCTCAACTACTGACCACAGTGGATGCAAGAGTAATTCCAGCAGGTGGAATTGAAAAACTCTGCAAAACCAAAAGTAGTATGGTATGATTGGTGAGTGAAAAATGGAAAAACTTTTTCAGTTTGTCAAATTAGAATGGCATTCAACTGAATCTGCAGCAGCTATAAATGGAGCAAACTCTTGCAGAGATTATTTGGTGGAGCTGCAAATTTTAGGTAGCTCAAAAGTTCTTAACAGGAACAAATATTGCCAAACATTATACTTTTCTTCAAAGCTTTCACTTTTTG

Coding sequence (CDS)

ATGAGTTCAAGAGAAAGGGAAAGAGATCTCGAGCTTCTGATCCCAGTCGCTGCAGTTTCTGAAAATGGAGCCTCCAAATCTTCTTCCGTACCCGCTGCCGCTTTGTCTCATCATCACTCCGGCCGCGAGGCACTTGCTAAAGTCATTCGCAGCTGGGCGTCGAAGAAGTTCATGACAGGATGTGTAATTCTTCTACCAATTGCTATTACATTCTACATCACGTGGGGCTTCATTCGTTTTGTTGATGGCTTTTTCTCTCCCATATATAATCACTTAGGGATCAATATTTTTGGGCTTGGATTTATTACCTCCATCACATTCATCTTCCTTGTTGGTATCTTCATGTCATCATGGTTGGGAGCTTCTGTTCTTACTCTTGGAGAATGGTTCATAAAGAAAATGCCACTTGTAAGCTATATTTACGCGGCCTCAAAGCAAATTAGTACTGCAATATCACCTGATCAAACTTCAAATGCGTTCAAGGAAGTAGCAATTATCAGGCACCCTCGTGCAGGGGAATACGCTTTCGGATTCATCACTTCCTCTGTTGTTCTTCAGAGCAGCATGGAAGAGGAAGAACTGTATTGTGTTTATGTGCCTACCAATCATCTCTATCTTGGAGACATAGTTCTTATGAATCCCAAGGACATTTTGAGGCCTAATCTGTCTGTCCGTGAAGGAATTGAAATTGTGATCTCTGGAGGTTTGTCAGTACCTCAACTACTGACCACAGTGGATGCAAGAGTAATTCCAGCAGGTGGAATTGAAAAACTCTGCAAAACCAAAAGTAGTATGGTATGA

Protein sequence

MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLLTTVDARVIPAGGIEKLCKTKSSMV

Homology

[Close]

BLAST of Sed0018734 vs. NCBI nr
Match: XP_022982481.1 (protein LIKE COV 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 481.9 bits (1239), Expect = 3.6e-132
Identity = 245/266 (92.11%), Postives = 255/266 (95.86%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSSVP AALSHHHSGREA AKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIY ASKQIS AISPDQTSNAFKEVAIIRHPR+GEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGD+VLM+ KDILRPNLSVREGIEIVISGGLSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 LLTTVDARVIPAGGIEKLCKTKSSMV 267
           +LTTVDAR +P GG++KLCKTKSSMV
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKSSMV 266

[Close]

BLAST of Sed0018734 vs. NCBI nr
Match: XP_022940542.1 (protein LIKE COV 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 244/266 (91.73%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSSVP AALSHHHSGREA AKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIY ASKQIS AISPDQTSNAFKEVAIIRHPR+GEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGD+VLM+ KDILRPNLSVREGIEIVISGGLSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 LLTTVDARVIPAGGIEKLCKTKSSMV 267
           +LTTVDAR +P GG++KLCKTKS MV
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKSCMV 266

[Close]

BLAST of Sed0018734 vs. NCBI nr
Match: XP_023525052.1 (protein LIKE COV 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.2 bits (1232), Expect = 2.3e-131
Identity = 245/266 (92.11%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSSV  AALSHHHSGREA AKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVSTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYDHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIY ASKQIS AISPDQTSNAFKEVAIIRHPR+GEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGD+VLM+ KDILRPNLSVREGIEIVISGGLSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 LLTTVDARVIPAGGIEKLCKTKSSMV 267
           +LTTVDAR +P GGI+KLCKTKSSMV
Sbjct: 241 ILTTVDARALPTGGIQKLCKTKSSMV 266

[Close]

BLAST of Sed0018734 vs. NCBI nr
Match: XP_038905657.1 (protein LIKE COV 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-130
Identity = 245/263 (93.16%), Postives = 252/263 (95.82%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M++RERERDLELLIPVA VSENGASKSSSVPAA LS+HHSGREA AKVIRSWASKKFMTG
Sbjct: 30  MNTRERERDLELLIPVATVSENGASKSSSVPAATLSNHHSGREAFAKVIRSWASKKFMTG 89

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 90  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 149

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLT+GEWFIKKMPLVSYIY ASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT
Sbjct: 150 ASVLTIGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 209

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSVVLQS MEEEELYCVYVPTNHLYLGDI LM+ KDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 210 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 269

Query: 241 LLTTVDARVIPAGGIEKLCKTKS 264
           +LTTVDAR IP  G EKLCKTKS
Sbjct: 270 ILTTVDARAIPTSGSEKLCKTKS 292

[Close]

BLAST of Sed0018734 vs. NCBI nr
Match: XP_022138471.1 (protein LIKE COV 3-like [Momordica charantia])

HSP 1 Score: 471.1 bits (1211), Expect = 6.4e-129
Identity = 243/264 (92.05%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSS PAA L +HHSGREA AKVIRSWASKKFM+G
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSAPAAPLPNHHSGREAFAKVIRSWASKKFMSG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGF+TSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFVTSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMPLVSYIY ASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGDI LM+ KDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240

Query: 241 LLTTVDARVIPA-GGIEKLCKTKS 264
           +LTTVDAR IP+ GGIEKLCKTKS
Sbjct: 241 ILTTVDARAIPSTGGIEKLCKTKS 264

[Close]

BLAST of Sed0018734 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.8e-97
Identity = 182/247 (73.68%), Postives = 209/247 (84.62%), Query Frame = 0


Query: 6   RERDLELLIPVAAVSENGASKSSSVPAAALSH--HHSGREALAKVIRSWASKKFMTGCVI 65
           RERDLE LIP+     +      SVP + L+   H +G+EA+ KVIRSWASKKFMTGCVI
Sbjct: 4   RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY HLGIN+FGLGF+TSITFIF+VG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSSV 185
           L++GEWFIKKMPLVSYIY+ASKQIS AISPDQ+S AFKEVAIIRHP  GEYAFGFITS+V
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183

Query: 186 VLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLLT 245
           +L+     EEL CVYVPTNHLYLGDI L++ KDI+RPNLSVREGIEIVISGG+S+P +LT
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243

Query: 246 TVDARVI 251
           T+D+  I
Sbjct: 244 TLDSETI 250

[Close]

BLAST of Sed0018734 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2)

HSP 1 Score: 351.3 bits (900), Expect = 9.7e-96
Identity = 181/244 (74.18%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 6   RERDLELLIPVA---AVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTGCV 65
           RERD ELLIPVA      +  +SK SS  +A+ S H S  E L+  IR WASKKFMTGCV
Sbjct: 13  RERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCV 72

Query: 66  ILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGAS 125
           ILLPIAITFYITW FI FVDGFFSPIY  LGIN+FG GF+TSI FIFLVG+FMSSWLGAS
Sbjct: 73  ILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGAS 132

Query: 126 VLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSS 185
           VL LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHPR GEYAFGFITS+
Sbjct: 133 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 192

Query: 186 VVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLL 245
           VVLQ+   EEEL CVYVPTNHLY+GDI+L+N  D++RPNLSVREGIEIV+SGG+S+PQ+L
Sbjct: 193 VVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 252

Query: 246 TTVD 247
           +TVD
Sbjct: 253 STVD 256

[Close]

BLAST of Sed0018734 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.7e-95
Identity = 180/250 (72.00%), Postives = 206/250 (82.40%), Query Frame = 0


Query: 6   RERDLELLIPVA--AVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTGCVI 65
           RERD ELLIPVA     ++G+S   S  ++A S H SG E L+  IR WASKKFMTGCVI
Sbjct: 4   RERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY  LGINIFG GF+TSI FIFLVG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSSV 185
           L LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHPR GEYAFGFITS+V
Sbjct: 124 LNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTV 183

Query: 186 VLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLLT 245
           VLQ+   EEEL CVYVPTNHLY+GDI+L+N  D++RPNLSVREGIEIV+SGG+S+PQ+L+
Sbjct: 184 VLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILS 243

Query: 246 TVDARVIPAG 254
           T+D  +   G
Sbjct: 244 TLDKPLASIG 253

[Close]

BLAST of Sed0018734 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.2e-76
Identity = 141/211 (66.82%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 36  SHHHSGREALAKVIRSWASKKFMTGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGIN 95
           S + S R+A   V++SW SKKFMTG V+L P+A+TF ITW FI+FVDGFFSPIY +LG++
Sbjct: 32  SPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVD 91

Query: 96  IFGLGFITSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQ 155
           IFGLGFITS+ F F VGIF SSWLG++V  LGE FI++MP V +IY+ASKQISTAISPDQ
Sbjct: 92  IFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQ 151

Query: 156 TSNAFKEVAIIRHPRAGEYAFGFITSSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPK 215
            + AFKEVAIIRHPR GEYAFGFITSSV LQ+   EEEL  VYVPTNHLY+GD+ L++ +
Sbjct: 152 NTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSE 211

Query: 216 DILRPNLSVREGIEIVISGGLSVPQLLTTVD 247
           +I+RPNLS+REGIEI++S G+++PQ+++ VD
Sbjct: 212 EIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242

[Close]

BLAST of Sed0018734 vs. ExPASy TrEMBL
Match: A0A6J1IZG0 (protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481287 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.8e-132
Identity = 245/266 (92.11%), Postives = 255/266 (95.86%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSSVP AALSHHHSGREA AKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIY ASKQIS AISPDQTSNAFKEVAIIRHPR+GEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGD+VLM+ KDILRPNLSVREGIEIVISGGLSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 LLTTVDARVIPAGGIEKLCKTKSSMV 267
           +LTTVDAR +P GG++KLCKTKSSMV
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKSSMV 266

[Close]

BLAST of Sed0018734 vs. ExPASy TrEMBL
Match: A0A6J1FJX0 (protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446112 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.7e-132
Identity = 244/266 (91.73%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSSVP AALSHHHSGREA AKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIY ASKQIS AISPDQTSNAFKEVAIIRHPR+GEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGD+VLM+ KDILRPNLSVREGIEIVISGGLSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 LLTTVDARVIPAGGIEKLCKTKSSMV 267
           +LTTVDAR +P GG++KLCKTKS MV
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKSCMV 266

[Close]

BLAST of Sed0018734 vs. ExPASy TrEMBL
Match: A0A6J1C9T6 (protein LIKE COV 3-like OS=Momordica charantia OX=3673 GN=LOC111009635 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129
Identity = 243/264 (92.05%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           M +RERERDLELLIPVA VSENGASKSSS PAA L +HHSGREA AKVIRSWASKKFM+G
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSAPAAPLPNHHSGREAFAKVIRSWASKKFMSG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGF+TSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFVTSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLTLGEWFIKKMPLVSYIY ASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSV+LQS MEEEELYCVYVPTNHLYLGDI LM+ KDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240

Query: 241 LLTTVDARVIPA-GGIEKLCKTKS 264
           +LTTVDAR IP+ GGIEKLCKTKS
Sbjct: 241 ILTTVDARAIPSTGGIEKLCKTKS 264

[Close]

BLAST of Sed0018734 vs. ExPASy TrEMBL
Match: A0A6J1IN97 (protein LIKE COV 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476782 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 8.4e-127
Identity = 241/265 (90.94%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MSSRERERDLELLIP--VAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFM 60
           MS+RERERDL LLIP  VA VSENGASKSSSVPA ALS+HHSG EA+AKVIRSWASKKFM
Sbjct: 16  MSTRERERDLGLLIPVAVATVSENGASKSSSVPAVALSNHHSGGEAIAKVIRSWASKKFM 75

Query: 61  TGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSW 120
           TGCVIL+PIAITFYITWGFIRFVDGFFSPIY HLGIN+FGLGFITSITFIFLVGIFMSSW
Sbjct: 76  TGCVILMPIAITFYITWGFIRFVDGFFSPIYAHLGINVFGLGFITSITFIFLVGIFMSSW 135

Query: 121 LGASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGF 180
           LGASVLTLGEWFIKKMPLVSYIY ASKQISTAISPDQTS+AFKEVAIIRHPR GEYAFGF
Sbjct: 136 LGASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSSAFKEVAIIRHPRGGEYAFGF 195

Query: 181 ITSSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSV 240
           ITS+VVLQS MEEEELYCVYVPTNHLYLGDI LM+  DILRPNLSVREGIEIVISGG+SV
Sbjct: 196 ITSAVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSTDILRPNLSVREGIEIVISGGMSV 255

Query: 241 PQLLTTVDARVIPAGGIEKLCKTKS 264
           PQLLTTVDAR IP GGIEKLCKTKS
Sbjct: 256 PQLLTTVDARAIPTGGIEKLCKTKS 280

[Close]

BLAST of Sed0018734 vs. ExPASy TrEMBL
Match: A0A5D3D7W1 (Protein LIKE COV 1-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00080 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.2e-126
Identity = 243/281 (86.48%), Postives = 251/281 (89.32%), Query Frame = 0


Query: 1   MSSRERERDLELLIPVAAVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTG 60
           MS+RERERDLELLIPVA VSENGASKSS+ P AALS+HHSGREA AKVIRSWASKKFMTG
Sbjct: 1   MSTRERERDLELLIPVATVSENGASKSSTGPVAALSNHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGF+TSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFLTSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180
           ASVLT+GEWFIKKMPLVSYIY ASKQISTAISPDQTS+AFKEVAIIRHPRAGEYAFGFIT
Sbjct: 121 ASVLTIGEWFIKKMPLVSYIYTASKQISTAISPDQTSHAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQ 240
           SSVVLQ  MEEEELYCVYVPTNHLYLGDI LM+ KDILRPNLSVREGIEIVISGGLSVPQ
Sbjct: 181 SSVVLQRRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 LLTTVDA------------------RVIPAGGIEKLCKTKS 264
           +LTTVDA                  R IP  GIEKLCKTKS
Sbjct: 241 ILTTVDARAMPTNVDARAMPTSVDPRAIPTSGIEKLCKTKS 281

[Close]

BLAST of Sed0018734 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 )

HSP 1 Score: 354.8 bits (909), Expect = 6.2e-98
Identity = 182/247 (73.68%), Postives = 209/247 (84.62%), Query Frame = 0


Query: 6   RERDLELLIPVAAVSENGASKSSSVPAAALSH--HHSGREALAKVIRSWASKKFMTGCVI 65
           RERDLE LIP+     +      SVP + L+   H +G+EA+ KVIRSWASKKFMTGCVI
Sbjct: 4   RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY HLGIN+FGLGF+TSITFIF+VG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSSV 185
           L++GEWFIKKMPLVSYIY+ASKQIS AISPDQ+S AFKEVAIIRHP  GEYAFGFITS+V
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183

Query: 186 VLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLLT 245
           +L+     EEL CVYVPTNHLYLGDI L++ KDI+RPNLSVREGIEIVISGG+S+P +LT
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243

Query: 246 TVDARVI 251
           T+D+  I
Sbjct: 244 TLDSETI 250

[Close]

BLAST of Sed0018734 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) )

HSP 1 Score: 350.5 bits (898), Expect = 1.2e-96
Identity = 180/244 (73.77%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 6   RERDLELLIPVA---AVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTGCV 65
           RERD ELLIPVA      +  +SK SS  +A+ S H S  E L+  IR WASKKFMTGCV
Sbjct: 13  RERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCV 72

Query: 66  ILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGAS 125
           ILLPIAITFYITW FI FVDGFFSPIY  LGIN+FG GF+TSI FIFLVG+FMSSWLGAS
Sbjct: 73  ILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGAS 132

Query: 126 VLTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSS 185
           VL LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHPR GEYAFGFITS+
Sbjct: 133 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 192

Query: 186 VVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLL 245
           VVLQ+   EEEL CVYVPTNHLY+GD++L+N  D++RPNLSVREGIEIV+SGG+S+PQ+L
Sbjct: 193 VVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 252

Query: 246 TTVD 247
           +TVD
Sbjct: 253 STVD 256

[Close]

BLAST of Sed0018734 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 )

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-96
Identity = 180/250 (72.00%), Postives = 206/250 (82.40%), Query Frame = 0


Query: 6   RERDLELLIPVA--AVSENGASKSSSVPAAALSHHHSGREALAKVIRSWASKKFMTGCVI 65
           RERD ELLIPVA     ++G+S   S  ++A S H SG E L+  IR WASKKFMTGCVI
Sbjct: 4   RERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY  LGINIFG GF+TSI FIFLVG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYAASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFITSSV 185
           L LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHPR GEYAFGFITS+V
Sbjct: 124 LNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTV 183

Query: 186 VLQSSMEEEELYCVYVPTNHLYLGDIVLMNPKDILRPNLSVREGIEIVISGGLSVPQLLT 245
           VLQ+   EEEL CVYVPTNHLY+GDI+L+N  D++RPNLSVREGIEIV+SGG+S+PQ+L+
Sbjct: 184 VLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILS 243

Query: 246 TVDARVIPAG 254
           T+D  +   G
Sbjct: 244 TLDKPLASIG 253

[Close]

BLAST of Sed0018734 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 )

HSP 1 Score: 287.0 bits (733), Expect = 1.6e-77
Identity = 141/211 (66.82%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 36  SHHHSGREALAKVIRSWASKKFMTGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGIN 95
           S + S R+A   V++SW SKKFMTG V+L P+A+TF ITW FI+FVDGFFSPIY +LG++
Sbjct: 32  SPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVD 91

Query: 96  IFGLGFITSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYAASKQISTAISPDQ 155
           IFGLGFITS+ F F VGIF SSWLG++V  LGE FI++MP V +IY+ASKQISTAISPDQ
Sbjct: 92  IFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQ 151

Query: 156 TSNAFKEVAIIRHPRAGEYAFGFITSSVVLQSSMEEEELYCVYVPTNHLYLGDIVLMNPK 215
            + AFKEVAIIRHPR GEYAFGFITSSV LQ+   EEEL  VYVPTNHLY+GD+ L++ +
Sbjct: 152 NTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSE 211

Query: 216 DILRPNLSVREGIEIVISGGLSVPQLLTTVD 247
           +I+RPNLS+REGIEI++S G+++PQ+++ VD
Sbjct: 212 EIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242

The following BLAST results are available for this feature:

BLAST of Sed0018734 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982481.1	3.6e-132	92.11	protein LIKE COV 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022940542.1	1.4e-131	91.73	protein LIKE COV 1-like isoform X1 [Cucurbita moschata]	[more]
XP_023525052.1	2.3e-131	92.11	protein LIKE COV 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038905657.1	1.5e-130	93.16	protein LIKE COV 1-like isoform X2 [Benincasa hispida]	[more]
XP_022138471.1	6.4e-129	92.05	protein LIKE COV 3-like [Momordica charantia]	[more]

BLAST of Sed0018734 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IQJ6	8.8e-97	73.68	Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1	[more]
F4IUE7	9.7e-96	74.18	Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 ...	[more]
Q8VY49	3.7e-95	72.00	Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1	[more]
Q9C8C1	2.2e-76	66.82	Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1	[more]

BLAST of Sed0018734 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZG0	1.8e-132	92.11	protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481287 P...	[more]
A0A6J1FJX0	6.7e-132	91.73	protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446112...	[more]
A0A6J1C9T6	3.1e-129	92.05	protein LIKE COV 3-like OS=Momordica charantia OX=3673 GN=LOC111009635 PE=4 SV=1	[more]
A0A6J1IN97	8.4e-127	90.94	protein LIKE COV 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476782 P...	[more]
A0A5D3D7W1	3.2e-126	86.48	Protein LIKE COV 1-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0018734 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18460.1	6.2e-98	73.68	like COV 3	[more]
AT2G20120.1	1.2e-96	73.77	Protein of unknown function (DUF502)	[more]
AT2G20130.1	2.6e-96	72.00	like COV 1	[more]
AT1G43130.1	1.6e-77	66.82	like COV 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007462	Protein of unknown function DUF502	PFAM	PF04367	DUF502	coord: 102..203 e-value: 5.8E-28 score: 96.9
None	No IPR available	PANTHER	PTHR31876	COV-LIKE PROTEIN 1	coord: 1..251
None	No IPR available	PANTHER	PTHR31876:SF20	PROTEIN LIKE COV 1-LIKE	coord: 1..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018734.1	Sed0018734.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane