Sed0018714 (gene) Chayote v1

Overview
NameSed0018714
Typegene
OrganismSechium edule (Chayote v1)
DescriptionGBBH-like_N domain-containing protein
LocationLG08: 29143353 .. 29154639 (-)
RNA-Seq ExpressionSed0018714
SyntenySed0018714
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAACAATCCTCACCAAAATCTCCATCAAACGAAGCTATGATAACTCTTTCATATAAAACTTCATCCTAAGGACCCAAATCTCCAATTTCTAATCATTCAAAGGCCCAACAGATTGTCATCCAAGGAACCACTAACAATATTCACTGATTTTTAAAGTGAAAAGAAAATTTTATTATAAAATAGAGGATCTTGCAAGATTTGAGAATGAACTTGCAATTGAATCGAATGGAGGAATGATGTTAGGTTTGCAAAGAGCTTTCCGGACGATCCATTCCACCGTCGATGCTCCACAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTAACCCTTTTTCCCCATTCATCTTCCTTCAAATTCCATTTCCGCCTTTTGATTTCTGGGTTTTGTTTTAAATTTTCTGTTTTGAATCACAACGAGGCGGAATCTGTGACACAAATCACAAACTGTTCCTTCTTGATTATCTGGAAAGCTTCATCATGTACTTATGAAACACCGAAGTCGGTGGCTTATGTTCTTCTTAGTTTCTTTTACAACTCATTGTTCTGATTTGCCAATTCAACTGAAAGTTGATTTCTGGATATCTTTATTCAATTTGGGAGGTTCCCATTTCTTTAAGAAAGCTATGCCACAGCTTGGATGCCCTTTTAGTTTCAAGCTCTGTGGGTGTGCTATTTTTCTTTATAATTCTAGGGGATGTGATGCAGGCTTTATCACTAATTTCATTGCGGTTTCAGAGTGATTGATTTGGATTCTGGGTCACTGCTTCTACATTTTGAAAATCTTGAGAACGTTGTCTTTTGCGAATTTTGTTTTTTGAGTTTGTTAACATGTGGATGGAGCTTCAAACATTCGACCTTTTGGTTGGAGATATATGTCTTAGCCGATTCAGCTAAATTCAGGTTGACTAGTTGTAAATTATGTTTTTTGAGTTCAACAACGTGTAGGGGTGGAGATTCGACTCTTTAATCTTTTGGTTGAATGTGTTTTAATGAGTTGAGCTAAGTTCAGGTTGGCATTAGGCCAACCAAATGGATATCTAGAATACTTCTACAGCTTTGGTGGTTTTCTCTTATTTGAACTAGGGTTGATACCATTCTTTCATCACAGTTCTGTTTGGACCATAACTTGCTTTAGAAGTTGACATTGATAAATGTTGTGATGTGCTATTTGTTTTCAGTTTGTGAATATTGTCCTTTTTCACATGCACTATTTACTGTGATACTGTTCACTGAATGTTTCATTTCAGGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCGTGAGAATATATAGCCCAGCTGTTGATGCCAAGGTCCGGTCAATTGGGGGTGAAAAGGTACGATAGAAACTATAATTCCAATAATTCATCTTGGATTGGTCTAATGGTTGCCATCTAAAATATTAAATGTCATCTATATTTTATGTCTTTAAACATTATAGGGTTAGATTGTTCTTCGTGTGCCATAAGATTAACATACGTGCAAATAAGTTAGTTCTGACACTTGCATTAATGCAAAAAGTTATAAGTTCGATTACTTTAGGACAATGTTTATATATACAGAATTTGTGGCTGATTTCCAATATAAGACATTGTTGGTTGATATAATTAAATTTACCTCATTGATTGGTGGTTTAACATAATTCAACATGGTATCAGAGCAAGAGGTCATGAGTTCGAATCCTTTCTAAGTCGTTCCTCCCCAATTAAAATTAAATTCCACCGTAGGGCACTTCTTAAATTTCTAAGCCCACAAGTAAGGGGGAGTGTTGGTTGATTTAATTAAATTTACCCCATAGGCTTTTGGATTGATTGGTGGTTTAACATAACTCAACAGAGATATGTTAACATTGGTATGATATTGTCCACTTTGGCCACAAACCCTCATGACTTTGTTTTTTGTTTCACCCAAAAGGCCTTATTACTAATGGAGATGAGTCCTCCCTTATTAGCCCATGATCTACCCCTTATTTAACCAATGTGGGATTACTGCTTTGTTTGTATTCCCAATAAGATATTTGAACTCGGTTAGTTTATTCATCATTGGCTTTGTTTTGTTATTGCATTTTGGAAGCTTATAGTATAAGCGGTGAGGAGAGGTATAGTCTTATAGGAGGTGGATAGGTTTAGTGCCTCCATGTAGGTGTTAAGTCACTGGGCTTGTTGTAATTATGAGTTTGGGCTTGTTGTGATGAGAGACATTAAAGATCCAGTTGTTTCTTTCCATCCACTACTTTCAGAAAAAAAGCATAAACAAAATTAATCCATGATAAGATCTCTTTGCCATCTTTGAAAGGATGTCCAACCAGCACATTGCAGAAGGGAAGATGTATCCTTGGGTCTAACAAAGGGCCAATTGAAGGGCTGTAAAATCATGTTCCAAAATGTGATTCTGTGTTTCTGCTCCATTGTAGCAGAGGTGGCAGCAGCTTGGAGATAATGAAATTCCAGGGACCTTGTCACCTACATTTGAAATATATCATGGGTATTGATAGCCTTGTGGCTTAATTCCCAAATGAAAATTTTGGCTTTTTTAAGCTGATTTCCTTTCCACAGATAAATGTAGAACTGTTTGTCAACTTTAAGGAGGTCAACAGAGGATCTCACCATCAAGTTCAGCAAGGATTTAGACAAAGAGTCACCATCTTTTTCAAGAGGCCAAAACCATTTATCATGTTCGGCATTCAACACTATATTATCAAGCTTGTACGAAACCAAAGCCCATTCCTCAATCTCAATCTCAGTGAGAAATCTTCTGAATGATAGGTCCCCATGATTGAGATACAATGCTTCAGCAAGAGCTAATAGGCTTCAATTTTTTCAAGGATAGCCGATGTAAGTGGGGGAAGAGCTCCATAGGTTTGTGATAGAATCTACCACACTTTTCTATTAAAATAAGATAAACCTCTCGAGAGAATCTCTCAAAGAGCCGCAATACAACAATGATAATTCGATACCTAAAAGAGTAACCTAGTCCGCCTATTTATAGCCTTCCTAGGATTTAACCTAACTTCGTAAATAACTCTATTTAGGCCCATAGGCCCATTACAAACTAAATGTGCATAATAAAATATATTAAAATAGTAATTAAAGCATTCTTCACTTCTTGCTTCGCCTCGAATATACTTTTAACGATGCCGGGATCGTATCAATACTTCCCCCCCACAGAGCCACCTTGTCCTCAAGGTGAAAGTCCGGAAATTGCAATTTCAAATCAGCTGCGGACTCCCAAGTCGCATCCTCTGGTGCGTAGCCTTCCCATTGGACCAAAACTTGACGCGATCCCTCCGCGTGGAAATTCTCTTGGACGCCCAACACAGCCTTAGGGCGAACCACCATGCACAGATCATCTCCCACCAAGGACGGTGTAGACATGACAAGAACCGACGAGTCTCCCGCTTTACGCAGAACTGACACGTGAAAAACCGGGTGAATTTTAACTGCCGGCGGAAGTTCCAAACGATAAGCAACAGGACCTACTCGAGCCACCACACGGTAGGGCCCAATAAACCTCGGCGCCAGCTTCGGGTGTTGAAATTTAGCCAAAGAAGATTGGCGGTATGGTCGAAGCTTGATATACACCAAATCATCAATATTAAACTGCACATCCCTACGTTTTGCGTTTGCGCGATCCGCCATAGATTGTTGCGCTCGCAACAAACTAGCCTTTAATGTGGTCAAGATCCGATCGCGATCCTTCATCAATGAATCCACAGATGCCACTGGGCTAACTCCGTGATCATAACCCAACAGGGTAGGAGGGGGTCTGCCATAAACGATCTCGAAGGGTGCCATACCCGTGGATGAGTGGAAAGAAGTGTTAAAGTCGTACTCGCCCAGACAACCATTGGTACCACGCCTTAGGATGATGCATTACGAAACACCTCAAATAGGATTCCAGCAACGATTCACCACCTCGGTCCGCCATCGATGCTGTGGATGGTAAGTGGGTGCTCGACACGATTTAGTACCGTAGCCTTGAACATCTCTTCCCAAAGCAAACTCGTAAAGACCTTATCGCGGTCAGATATAATACTTTTTGGAATTCCGTGCAATCGAACAATCTCCTTGATAAACACCTTTGACACCGACAAGGAAGAAAACGGGTGTCGAAGAGGTATAAAATGAGAATATTTGGACAAACGGTCAACCACCACCCAGATAGTGTCATAACCTCGGATCGCGGTAAACCTTCCACAAAGTCCATCGAAATATCTTCCCAGACCTGTGCAGGGATCGGCAAAGGCTGTAGCAACCCCGCAGGAGATAAGGATAAATGTTTAGCTTGAACACAGATAGAGCATTCGGCCACAAAGGAACGCACACGAGCCTTCATTCCTTGCCAATACACCTCCTTAGCCAAGCGCTGATAAGTTTTAAGGACTCCGAAATGTCCCCCAATAGCACCACAATGGAATTCAAGCAAAAGTAGAGGAATCGTTGGAGATGTCGGAGGCAAAACAAGCCGACCCTGATAAAGCAACACATCACCAACTATCGAGTATCCGGGGGCCCTTACGTGGTCAGCGACTTATAAATTTCCATCAGCTTATCATCCTCTTTAACCTGTTGCGTAAATACGGCGGTGTTAATACCCGCCACCACACTCAGCATGCCGAGCTCGCATTTCTCGGGCATTCGTGACAAGGCATCCGTAGCTCTATTTTCAAGGCCCTTCTTATATTCGATGCTGAAATCATAACCCATTAATTTCGCGATCCATCGCTGATAGTCACCATCCACTACACGCCGCTCAAGAAGAAATTTGGACTCTTACGGTCAATCACGAACAACAAAGTGATGCCCTAACAGATAGGCCCTTGTTGCACCGCGAAAACGATTGCCATCAACTCACGTTCATACACGGTTTCACCCGATGAGTAATTGGCAATGCCCTGCTAAAATATGCTATCGGCTGACCCTGTTGCATCAGAACTGCTCCCACCCCGATGCCTGAAGCATCGGTTTCGACCACAAATATTTGGTCAAAATCTGGCAATCGCAGGACCGGAACACTACTCATAGCATGTTTCAGTCGCTGAAAGCTGTCTTCGGCAGCCGGTCCCCATTCAAACTTCCCCTTCTTTAATAGCTGGGTCAGCGGAAAAGCCATGGAACCGTAGTTAGCCACAAAACGTCGATAGTAACCGGTTAACCCCAGGAATCCTCGGAGGTCCCGAATATTTCGAGGACTAGGCCACTCTATCATCATTTGTGATCTTAGCCGGGTCGGCAGAGACGCCTTCCACAGATATAAAATGCCCTAAGTACTCAATACGTTGCAAACCAAATTGGCACTTCTTCGCATTTGCGACGAAAGCATGTTCCTGCAGCACCTCAAAAACACGAGCAGTGCTCCTGTGTTCTGAATAGTCATCTTTGTAAATCAAAATATCATCAAAAATACCAAAGACGAACTTACGCAGAGAATCGACCGCAAAATCTCATTCATCACAGATCGAACGTAGGCGGAGCATTCCGCAACCCAAAGGGCATGACTACAAACTCGTAATGTCCTTCATGCGTTCGAAAAGTCATGTCTTGTATCGTCGGTCGGTTTGACACGAATTTGGTGATACCCAAACCTTTAGATCAATTTTCGAGAAAACCGACGCGCCATGAAGCTCATCCAACAACTCATCCACCAGTGAGTATTGGGTATTTATCCGATGATTGTAGCTCTGATTTAATGCACGGTAATCGACACGTAAACGCCAACTTCCATCCTTCTTTTCACTAACAACACAGGGCTAGAGAAAGAACTCGTGCTAGGCGAATTACCCCGCTAGCAACATTTCCCCGTACTAGTTTCTCTATCTCGTTTTTACGATATTGTAGGTACCGATATGGCCGGACATTCACCGAGTTCGTCCCCGCAATCGATTCGATCGCATGATCACGATTTCTTCGGGAGGTAAAATCGCCAAAGATTGAAAAACCGATGAAAAGATTTAATTAAAGAGTGAAGCTCTCGGGTACCCGCGATAAACTGGGAGCATCTTGGTTGGTTCACAATCTGTGTTGTCACCTCACACATGTTCAACTCGACCGGTAATCCTTGGTCCTCGTGGGCGTAAGGATTTCATCATGGATTTCAAGGATACTTGAGCCTTGACCAACCAGGGGTCCCCTTGCAGTCTGCTGCTGCGGGACCCCAACACAAACCGCATCTTGAGGAATCGAAATTGAATTCTATCCTTCCCAATGTTTCTAGCCATGCCACCCCCAAAATCACATCCGCACTACCTAAAGGTAAAGGTAGGAATTCATGTACCACTTTCAATTCAAGCAAGGTGTAGCACCACATTTTTACTGATTCCGCCGCTTCGCACAGATTCGCGGTTCCCAACATGATGCCATAATCATTTGAGGGCTCTATCGGTAACTTTAACTTCTCCACAAGGACGTCGGAAATAAAGTTATGGGTGGCCCCACAATCTATCAAAACCACCACTTCTAACCCCTGAATAAATCCAGTGACTTTCAAAGTCTTGGGTGAGCTCAGCCCCGCCAATGAGTTTAAGGACAACGCCGCTAAATCCCTTGTATCGCCCGATCCATCCAAAAAGTTTCATCCTCCAAAGGCCTCATCATTTTTTGGACGACTCCTCGTGGTCATAGGTGTCGCGTACTACCAATATCTCCAAAGATTGAAGTTCTTTCTTTTTGCATCGGTGCGGTACAAATTTCTCATCATAGCGGAAACACAACCCCTTATCCTTCCCGACACGGATTTCACATGCTGTCAAACGCTTATATACGGCGTAGTGGTCGTAGTAATCGTTTGTAATCGGTTTAGACGTTGAGAATGTAGTCGTTCTCATAGTTGCAACACCCGCTCCTTCGTGCTAACAAATCCTCGATCCCCACTTGTTCTCGTTCACTAGTCCGGGCTCACCCCTTTTCCTAGTGCTCGGAAAGCCAGATCATCCTCAATTACTTGTGCCATAAACTTTTTATCTTGTATTCCCACGGGTCGTAATTTTCTCATTTCACTCCTTATTTCTTCTTTTAAACCGCTCTCCCATTTCCCTTCGCATGACCGGCACTAATATCGCGCATTCCCTTAGCATATTTCTCAAACGATCGTCGATATTCTTTTTGATACCCTCTTGATGCAAACTCATCGACTTAGCGTACCTATTGTCATTTATCTTTGGGTTGGAATCGGTGTAACAGAGCTCACGAAATTCTTCCCAAGAACCGACGGTGATCGATCTTCCTCATCGCAACCATTCCAGGCCTCGCCCTCCATACACAAAGCCGCGCGGCGTCGACTCGTTCTCGCCCAACTAATCGGTTAACCCAAAAATACCGTTCCACTCGACACAACCAACCTTAGGATCCTCATCGGTAAGACCCTTAAAAGCGGCATCTCGAGAAGCCAGTAACCTCTGTCAACATCTGGACTCGCCGCTCTCCTATGTTCGTCCTCTCCTGTTCAGATCGGTCCTCCCACTCTCTCCGTCTTCCGGTCTCCCTCTCGACACGCCATCCCACCCCCGTTCGTTCCAACCGTCGTGCGCTATCGGTCTGTCATAACCCATGCGCACCCTCCTCTCCTCCGGTGACTCGTGGACCCGGCCGTTACTCCCATCACCGAACTCCGGGTATCTCTCTCTCCGGTCCCGCTCAAATGGTCCAAACCGACCCGACCCGAACATTCCGGCCCGACCCGGTCCCCCTTGACCGCCCCGTGCCCCCCGACACCTGGTCTGCCGTGCGCCACTCCCGACCCGCACGCCGCCGACCCCGCCGCTCGACACTACTCGCCCGAGCCCCACCGAGCCCCACCCGGCCCCTTCCGTGGCCGTGATCCCAACCACGCCCGGCCCACTGCCCGGCCCCCAAGCCACACGACCCCCTGCGCCCCCGCCGACAACACCGCCCGCGCCCCAACCCGCGCCCGCGCCCCAACCCGCGCCCGCGCCCCAACCCGCGCCCGCGCCCGCGCCCCAACCCGCGCGACCCGCGCGCCCTCGCTCACACTCGGCCAAGCGCGCGGCTCTCGACTGCCGGCGGCACCCTGCTGTTTCGCGCCCGCCGCTTCCGCCGTCGCCCAGGCGCGGCGCTCCGGTCTGTCCCCGCCCCGCCCCGCCGCGCCCTCGCGCTCACCGCACCAGCACCCGGCCACGCTGACCTCTCGCCCCGAACCGCCTCGGCGCCGAGTCCACCCCCTTCCCTTTGTTCGCACCGCTTGCCTCGGTTCCTGGCCGTTCCGGTGTTCGTTCTAGCAACTTTTGTAAATTTAGGTTAATTTGACCTATCTCACTATTCATCGCTGCCAGTTGAACCTCGAATTCCTGTTGCTTCTTCACCATCTCGGCACCACTCGATTCGCACTCTTGAACCCTAGTCTCCATCTTGGTAGTTACCATTCCCGGATCGGTAAATGGCTCTGATACCAAAATGATAGAATCTACCACACTTTTCTATTAAAATAAGATAAACCTCTCGAGAGAATCTCTCAAAGAGCCGCAATACAACAATGATAATTCGATACCTAAAAGAGTAACCTAGTCCGCCTATTTATAGCCTTCCTAGGATTTAACCTAACTTCGTAAATAACTCTATTTAGGCCCATAGGCCCATTACAAACTAAATGTGCATAATAAAATATATTAAAATAGTAATTAAAGCATTCTTCACTTCTTGCTTCGCCTCGAATATACTTTTAATGATGCCGGGATCGTATCAGTTTGCAACAGTCATCTATCTTCCCTAAAAAAAGAATGCATTCACCATTTCCAATTTTGTGGGCTAATTTAGAATAGATCAAGTTGTTAACCTTTGCAATATTCTTCCAATGACCCATTGCTAAATGAAGGTTCATTTTTCCAAGATGCAAGGTTGATAGATTTACCAAATTTCTTTTGTATCAATAATCTCCATAGATCATTCTTGTCAACAGAAAATCTCCAAGACCACTTAGCTAAAACTGAGTAATTTTTCAAACAGATATCTGGAATACCAAGGCCTCCCTTATCCAGAGGCTTCTTAATGGTGACCCATTTGATTGAATGGCTACAAGCCTCTCCTCTATTCCCCTCAAAATATAGTTTTCATAAAGTTTCTTAATCAACACAATGACCTTGGTTGGAGCTTAAAGAGAGACAAGTAGTAGTTAGGTAAATCTGATAAAGTAGCATTAATGAGAGTGAGTCTACCTCCTTTAGATATATTGGTTGAACCCTAATTATGTAGTCTCTTCTCAATTTTCTCAATAACTGGAAGTCAAGGGCAACCCAAGGTATAAGGCCGGTCACTTGCTAATTTTGAAGCCATAAGGATCAAATCGCTCTGATAGCACTCTAGCAATAATCTTGTATAAATAAGTTGGGAGACATATGAGACAATAATCAGTGACAAATTTGGGTACATTAGTTTTAGGAATAAGGCAAATACATGTTTCATTAAAACTCGCATTAATAATACCATTCTTGAAGTCCCCAAGGGGTGGCAAAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCTTAAGGTCCCAGGTTCGAGACTCAACTGTGACATTACTCTTTCGATGTCTCCCGGTGCCTGGCCTAGGGACGGGCGTGGTTATCCTTGTTTAAAAAAAAAAGAAAAACCATTCTTGAAAAAAATCCTTACACTCTCTTGGCATCATCCTTGAGAATGTTTCGAGGAATCAGGATTATGATATGATCCTGGATCTAGATTATATAAAAAGGTAAAAGAATGCAAGATAACCTACTTTGTATAAATAAATCTCTAGAGAGAATCTCCCTTAGAGCCCTAGTACAAAAGACTACTACTTTCTGAATTAATAATAATGAACTAACTCCTCCTATTTATAGATTTAGAACATCTTCCTAATCCTAATCCTAATCCTAATCCTAATCCTATTCCTATTTCCTAATCCTACAAGAAACCCTAATTAATAATAAGGCCTAATAATAATCCATGGCCAGGATTGTATCAGTACTTCCCTCGCAGAGCCACCTTGTCCTCAAGGTGTTGGGGTAGTAGCGGCGGTGGCTGCGGAGGCAGCAGTGGCATCGGTGACGGTGGTGCGTCGGTGGTAGTGGTGGAGGTGGTGGCGACAGTGGTGACGGTGGCAGTGGCAGCAGTGGTGGTGGTGCGTCGATGGCAGCGGCGGTGGTGCAGTGGTGAAAGCGGAGGTGGTGGCGGAGGCAGCGGTGATGGCGGCGGAGGTGGCGGCGGCAATGTCAGAGGTGGTGGCGGTGGCGGTGGCGGGGTCAAAACCCTAGACGTCACTTTAACTTGAATTGACTTCATCTTCTCTGATTGTTTTTCTTTTTCTTCCATAATAATTTCCTCTTTGAGCTCTCTAAGAGAATTATTTAGGTCACTGCACCTCTTCCCTAGCTGATAATATGAGTGGTTCAGCCTTGATGGACTTTCTCCTTTCAAACTCAAAGTCGGTAAGGGATAATTTCTTTACTTTTCTATCAATGATATCAAGTTCACCTTGTATCTTCAAAATCAATTCTTTATGGTGGCCAAAATTGCGATGGTTTCTCCACTTTTAAGTTGTTTTTTTTAAAGACTTTGAGTTTCATAATAAAGCCATGACCAGGCCAGCACTGTAGCCAATTCTTCATAAAGTCTGAGAAGGAACCATGAGTCAATAAGCATTCATGAAACGTTATGGGGTGGGTCCCCAAACTTCTTTTCCCAGAGAGGCCAATTGGGATCAAGAGAGTCCAATAGGGAAATGATCCAAGCATAATGTCTCAAGCCTTCTAGCTGTAATATGGCCAAACTTTAAGGAAATTTCTTCTGCTAATAAAAACTTACTGCTGAATTGTGTTAAATCATCAATCAACCCAAAAGCTTAAGCTGGTGGGTTGGAGTAAATTTAATTATATCTACCAACACTCTCCATCACTTGTGGGTTTAAAAATTTGAAAAATGCCCTGGAAGTGAAATTCAATTTTAATTTGGGAGGAAATAACTTAGCAGAGATTCGAACTCAGGACATCCTGCTTTGATAAGAAATTAATTTTATAATTGAGAATAAAATTTCATTATACTTTCACACTTTTACTATTGAGGAAGGGGTTTATTTTATAGAGAAAAAACCCAACAAATAATTAACAAGATTCTCCTAAAAATATAGGATACAAAATAAATTGAGAATTTTAAGGAAATAACCAACACCTATTGATCAATGAGAAAGTTGGTTCGCATCTGAGGTTAGACCAAGTGAACTTCCCATTACATAAAACAAATCCAGTAGGTTCTACAATGAAAGAGTTGAA

mRNA sequence

ATTAACAATCCTCACCAAAATCTCCATCAAACGAAGCTATGATAACTCTTTCATATAAAACTTCATCCTAAGGACCCAAATCTCCAATTTCTAATCATTCAAAGGCCCAACAGATTGTCATCCAAGGAACCACTAACAATATTCACTGATTTTTAAAGTGAAAAGAAAATTTTATTATAAAATAGAGGATCTTGCAAGATTTGAGAATGAACTTGCAATTGAATCGAATGGAGGAATGATGTTAGGTTTGCAAAGAGCTTTCCGGACGATCCATTCCACCGTCGATGCTCCACAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCGTGAGAATATATAGCCCAGCTGTTGATGCCAAGGTCCGGTCAATTGGGGGTGAAAAGGATTGTATCAGTACTTCCCTCGCAGAGCCACCTTGTCCTCAAGGTGTTGGGGTAGTAGCGGCGGTGGCTGCGGAGGCAGCAGTGGCATCGGTGACGGTGGTGCGTCGGTGGTAGTGGTGGAGGTGGTGGCGACAGTGGTGACGGTGGCAGTGGCAGCAGTGGTGGTGGTGCGTCGATGGCAGCGGCGGTGGTGCAGTGGTGAAAGCGGAGGTGGTGGCGGAGGCAGCGGTGATGGCGGCGGAGGTGGCGGCGGCAATGTCAGAGGTGGTGGCGGTGGCGGTGGCGGGGTCAAAACCCTAGACGTCACTTTAACTTGAATTGACTTCATCTTCTCTGATTGTTTTTCTTTTTCTTCCATAATAATTTCCTCTTTGAGCTCTCTAAGAGAATTATTTAGGTCACTGCACCTCTTCCCTAGCTGATAATATGAGTGGTTCAGCCTTGATGGACTTTCTCCTTTCAAACTCAAAGTCGGTAAGGGATAATTTCTTTACTTTTCTATCAATGATATCAAGTTCACCTTGTATCTTCAAAATCAATTCTTTATGGTGGCCAAAATTGCGATGGTTTCTCCACTTTTAAGTTGTTTTTTTTAAAGACTTTGAGTTTCATAATAAAGCCATGACCAGGCCAGCACTGTAGCCAATTCTTCATAAAGTCTGAGAAGGAACCATGAGTCAATAAGCATTCATGAAACGTTATGGGGTGGGTCCCCAAACTTCTTTTCCCAGAGAGGCCAATTGGGATCAAGAGAGTCCAATAGGGAAATGATCCAAGCATAATGTCTCAAGCCTTCTAGCTGTAATATGGCCAAACTTTAAGGAAATTTCTTCTGCTAATAAAAACTTACTGCTGAATTGTGTTAAATCATCAATCAACCCAAAAGCTTAAGCTGGTGGGTTGGAGTAAATTTAATTATATCTACCAACACTCTCCATCACTTGTGGGTTTAAAAATTTGAAAAATGCCCTGGAAGTGAAATTCAATTTTAATTTGGGAGGAAATAACTTAGCAGAGATTCGAACTCAGGACATCCTGCTTTGATAAGAAATTAATTTTATAATTGAGAATAAAATTTCATTATACTTTCACACTTTTACTATTGAGGAAGGGGTTTATTTTATAGAGAAAAAACCCAACAAATAATTAACAAGATTCTCCTAAAAATATAGGATACAAAATAAATTGAGAATTTTAAGGAAATAACCAACACCTATTGATCAATGAGAAAGTTGGTTCGCATCTGAGGTTAGACCAAGTGAACTTCCCATTACATAAAACAAATCCAGTAGGTTCTACAATGAAAGAGTTGAA

Coding sequence (CDS)

ATGATGTTAGGTTTGCAAAGAGCTTTCCGGACGATCCATTCCACCGTCGATGCTCCACAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTAGAGGTTAAATTTGCAGATGGAAGTGTGTTCAATTTGTCAGCTGAATTCGTGAGAATATATAGCCCAGCTGTTGATGCCAAGGTCCGGTCAATTGGGGGTGAAAAGGATTGTATCAGTACTTCCCTCGCAGAGCCACCTTGTCCTCAAGGTGTTGGGGTAGTAGCGGCGGTGGCTGCGGAGGCAGCAGTGGCATCGGTGACGGTGGTGCGTCGGTGGTAG

Protein sequence

MMLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEKDCISTSLAEPPCPQGVGVVAAVAAEAAVASVTVVRRW
Homology
[Close]
BLAST of Sed0018714 vs. NCBI nr
Match: XP_023528840.1 (uncharacterized protein LOC111791650 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528841.1 uncharacterized protein LOC111791650 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML LQRAFRTIH+TVDAPQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 5  MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 65 SIGGEK 70

[Close]
BLAST of Sed0018714 vs. NCBI nr
Match: XP_022935012.1 (uncharacterized protein LOC111442002 isoform X2 [Cucurbita moschata])

HSP 1 Score: 124.4 bits (311), Expect = 5.7e-25
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. NCBI nr
Match: XP_022935010.1 (uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata])

HSP 1 Score: 124.4 bits (311), Expect = 5.7e-25
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. NCBI nr
Match: XP_023528842.1 (uncharacterized protein LOC111791650 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-24
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML L RAFRTIH+TVDAPQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLTLHRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. NCBI nr
Match: XP_022984013.1 (uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima])

HSP 1 Score: 121.7 bits (304), Expect = 3.7e-24
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML L RAFRTIH+TVD+PQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALHRAFRTIHTTVDSPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. ExPASy TrEMBL
Match: A0A6J1F4E2 (uncharacterized protein LOC111442002 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442002 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-25
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. ExPASy TrEMBL
Match: A0A6J1F9C8 (uncharacterized protein LOC111442002 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442002 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.8e-25
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML LQRAFRTIH+TVDAPQ+TSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALQRAFRTIHTTVDAPQVTSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. ExPASy TrEMBL
Match: A0A6J1J9C4 (uncharacterized protein LOC111482460 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482460 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML L RAFRTIH+TVD+PQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALHRAFRTIHTTVDSPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. ExPASy TrEMBL
Match: A0A6J1J985 (uncharacterized protein LOC111482460 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482460 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 2  MLGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVR 61
          ML L RAFRTIH+TVD+PQITSFALRAPKYVEVKFADGSVFNLSAEF+R+YSPA DAKVR
Sbjct: 1  MLALHRAFRTIHTTVDSPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 60

Query: 62 SIGGEK 68
          SIGGEK
Sbjct: 61 SIGGEK 66

[Close]
BLAST of Sed0018714 vs. ExPASy TrEMBL
Match: A0A6J1DMU7 (uncharacterized protein LOC111021468 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021468 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22
Identity = 55/65 (84.62%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 3  LGLQRAFRTIHSTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRS 62
          + L RAFRTIH+TV+AP++TSFALRAPK+VEVKFADGS+FNLSAEF+RIYSPAVDAKVRS
Sbjct: 1  MALHRAFRTIHTTVEAPRLTSFALRAPKFVEVKFADGSLFNLSAEFLRIYSPAVDAKVRS 60

Query: 63 IGGEK 68
          IGGEK
Sbjct: 61 IGGEK 65

[Close]
BLAST of Sed0018714 vs. TAIR 10
Match: AT3G27340.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-13
Identity = 33/60 (55.00%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 10 RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK 68
          R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EF+RI+SPA D KVRSIGGEK
Sbjct: 10 RRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADGKVRSIGGEK 69

[Close]
BLAST of Sed0018714 vs. TAIR 10
Match: AT3G27340.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-13
Identity = 33/60 (55.00%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 10 RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK 68
          R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EF+RI+SPA D KVRSIGGEK
Sbjct: 10 RRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADGKVRSIGGEK 69

[Close]
BLAST of Sed0018714 vs. TAIR 10
Match: AT3G27340.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 7.0e-13
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0 

Query: 10 RTIHST--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFVRIYSPAVDAKVRSIGGEK 69
          R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EF+RI+SPA D KVRSIGGEK
Sbjct: 10 RRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADGKVRSIGGEK 69

Query: 70 -----DCISTSLAEPPCPQGVGVVAAV 90
                 +    AEP    GV +  +V
Sbjct: 70 VISGRRYVGIMSAEPVGNYGVRIQVSV 96

The following BLAST results are available for this feature:
BLAST of Sed0018714 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023528840.14.4e-2592.42uncharacterized protein LOC111791650 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022935012.15.7e-2590.91uncharacterized protein LOC111442002 isoform X2 [Cucurbita moschata][more]
XP_022935010.15.7e-2590.91uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata][more]
XP_023528842.12.8e-2490.91uncharacterized protein LOC111791650 isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_022984013.13.7e-2489.39uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima][more]
BLAST of Sed0018714 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0018714 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F4E22.8e-2590.91uncharacterized protein LOC111442002 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1F9C82.8e-2590.91uncharacterized protein LOC111442002 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J9C41.8e-2489.39uncharacterized protein LOC111482460 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J9851.8e-2489.39uncharacterized protein LOC111482460 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1DMU71.3e-2284.62uncharacterized protein LOC111021468 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of Sed0018714 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27340.12.4e-1355.00FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPR... [more]
AT3G27340.32.4e-1355.00FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPR... [more]
AT3G27340.27.0e-1344.83FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPR... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35303:SF6BNAA06G32170D PROTEINcoord: 9..68
NoneNo IPR availablePANTHERPTHR35303OS02G0197800 PROTEINcoord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018714.1Sed0018714.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding