Sed0018705 (gene) Chayote v1

Overview


Name	Sed0018705
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-box zinc finger protein
Location	LG01: 18817266 .. 18819244 (-)
RNA-Seq Expression	Sed0018705
Synteny	Sed0018705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTCAATGCGACGTGTGCAAGAAAGAGGAGGCGGTGCTTTTCTGCACGGCCGACGACGCCGCCGTGTGCTCCGCCTGCGACGACCGCGTCCACGGCGCCAACATCCTCGCCGCCAAGCACCTCCGTTTTCCCCTCCATTCCAACAACCATTTCCTCCTCTGCGACGTGTGCCAGGTCCCGTAAACCCTCTTCTTCTCCTCTTCCATTTCTAGGGTTTCCATTTCCGATTTCGATTTCCTGTTTCTGTTGCAGGAGAGACGAGCCTTCTTGTTCTGCCAACAGGATCGGGCGATTCTGTGCTGCGATTGCGACCTCCCAATCCATTCCTCCAGCGAGCTCACTCGGAATCACGACCGGTTCCTTCTCACCGGCGTTCATCTTTCTGCCGCGAATGCGCCGCCGCCTGTGTTGCATTCGCCTTCGGTTGCTGAGAGCTCGACTTCGAACGCTCCGGTGGCGGCGGAGAACGGCGTGTCGGAGTATTTGATTGAGGGGATTTCTGGCTGGAACTTTGATGACTTTCTTGATTCTTCCTCTGCTTTCTGTAAGGTCCGATACTCTGTTTTTTTACGCAATCCATTTTTTGTTCTCTACTTTTTCTGGAGATTGGATCTGATTTTTTTTTATTTTAATTGGTTCGAGTACCATTTTTAATTTAATTTTAGTGAATAAACTTTTTTAAACCCCATTCGATGATTATTTTATTTTATTTTTTATTTATGAAATTTTAGATTATTTTTATTCAAATTTTTAACATGTGCTCCATCTTTCTCACCATGTATCCGTCTTTCCTTAACAAAGTAAAAGAATATTAACCAAACTTCAAAAATATAAACAAGTTTTTGTAAACTAGTTTATAAATTTTAGTTTTGTTTATTAAAATTAGGTAAGATGTAGATTAAATAAAGAAGAAGGTATGATAAAAGTAATTGTTGTAGGCTTAAATTTAGTAAACAAAAAATGAAAAACAAAATGGTTACCAAACATGCCTAAATTTTTGGATTTTGAATTTTTGTTTTAAAAAAAAAACCGTATATATTTCATCATTTATTTTTGTTTTTTGTTTTTAAAAATTAAAAAAAATGTTTTATAAGGGTTCTCTATTTTCAAATATCACATCTTGTTTGTATTTTTTTTAATTTTTAATTATTTATTCTTCATTTTTTTATGTTTTTTAAAAATAAAAATAAAAAATATTTTTAAAAGCTGCTTTTTTTAGTTTTTAAATTTTTTTATTATTTTAAAAATATTTTTAAAATTTTTAAAATAAAAAATAAAATGATTATTAAACGGGACCTTAATTTTTAACTTCCAAATTTCTTCACTCCGATTACTAATTTGAAATTTATTCCATTTTACTTTCTTAAATTCCAAAAAATCTAATTTTAATATGAACTTTCAAAATTATCCGATTGCAGTAGATGTGCTTAGGTTAACTAATTATCCATGATTTTTCAATATGTATATTAATTAGTCTTTATTGATTTTTTTAAAAAAAAATTAAAAAAAAAAAACATATTTTCCCATAATTTTTAGAAATTTGTTGAACTAACTTTTTTTTACTTGCATTACAAATATTAATATTATCCTTAAAATTGAATATTTAAAAATTTATTAACTAAAATGAAAGAAATTTGAAAACCCTATAATCTGAATTTTATATTTGAAAGTTCAATGATTAAAATAAAATAAATTGGAAGGTTGAAAACTAAAATCAATTTCTTTATTTAAGATGGGATTTCCCCCTTTTTTTTTTCTTGAAGAGACTGAAATTGAATTTTGAAAGTTAAACGATTACAATGGAACAAAACTCAAAATCTCATACTTTAACCTTTTAAATCTCATTTATATTTGATTAATTCAGCTTGCAGAGGGATGATGTTGATGGTGATTGGATTTTCCCATTTGTTGATACTCTACTGGAATTAGAAATGAGCACAGATTCTATGGACGGTTTGTGTTTGGCCAAGTAG

mRNA sequence

ATGAAGATTCAATGCGACGTGTGCAAGAAAGAGGAGGCGGTGCTTTTCTGCACGGCCGACGACGCCGCCGTGTGCTCCGCCTGCGACGACCGCGTCCACGGCGCCAACATCCTCGCCGCCAAGCACCTCCGTTTTCCCCTCCATTCCAACAACCATTTCCTCCTCTGCGACGTGTGCCAGGAGAGACGAGCCTTCTTGTTCTGCCAACAGGATCGGGCGATTCTGTGCTGCGATTGCGACCTCCCAATCCATTCCTCCAGCGAGCTCACTCGGAATCACGACCGGTTCCTTCTCACCGGCGTTCATCTTTCTGCCGCGAATGCGCCGCCGCCTGTGTTGCATTCGCCTTCGGTTGCTGAGAGCTCGACTTCGAACGCTCCGGTGGCGGCGGAGAACGGCGTGTCGGAGTATTTGATTGAGGGGATTTCTGGCTGGAACTTTGATGACTTTCTTGATTCTTCCTCTGCTTTCTGTAAGAGGGATGATGTTGATGGTGATTGGATTTTCCCATTTGTTGATACTCTACTGGAATTAGAAATGAGCACAGATTCTATGGACGGTTTGTGTTTGGCCAAGTAG

Coding sequence (CDS)

ATGAAGATTCAATGCGACGTGTGCAAGAAAGAGGAGGCGGTGCTTTTCTGCACGGCCGACGACGCCGCCGTGTGCTCCGCCTGCGACGACCGCGTCCACGGCGCCAACATCCTCGCCGCCAAGCACCTCCGTTTTCCCCTCCATTCCAACAACCATTTCCTCCTCTGCGACGTGTGCCAGGAGAGACGAGCCTTCTTGTTCTGCCAACAGGATCGGGCGATTCTGTGCTGCGATTGCGACCTCCCAATCCATTCCTCCAGCGAGCTCACTCGGAATCACGACCGGTTCCTTCTCACCGGCGTTCATCTTTCTGCCGCGAATGCGCCGCCGCCTGTGTTGCATTCGCCTTCGGTTGCTGAGAGCTCGACTTCGAACGCTCCGGTGGCGGCGGAGAACGGCGTGTCGGAGTATTTGATTGAGGGGATTTCTGGCTGGAACTTTGATGACTTTCTTGATTCTTCCTCTGCTTTCTGTAAGAGGGATGATGTTGATGGTGATTGGATTTTCCCATTTGTTGATACTCTACTGGAATTAGAAATGAGCACAGATTCTATGGACGGTTTGTGTTTGGCCAAGTAG

Protein sequence

MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHSNNHFLLCDVCQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLSAANAPPPVLHSPSVAESSTSNAPVAAENGVSEYLIEGISGWNFDDFLDSSSAFCKRDDVDGDWIFPFVDTLLELEMSTDSMDGLCLAK

Homology

[Close]

BLAST of Sed0018705 vs. NCBI nr
Match: XP_022940034.1 (B-box zinc finger protein 21-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-64
Identity = 139/217 (64.06%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCNKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCD PIHS +ELT+ HDRFLLTGV L   SA N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDFPIHSVNELTQKHDRFLLTGVKLSCESAGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FDDFLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDDFLDS 180

Query: 181 SS------AFCKRDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKSDEVDGDWVFQFVDDLVELETSGDS 216

[Close]

BLAST of Sed0018705 vs. NCBI nr
Match: XP_022981860.1 (B-box zinc finger protein 21-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-64
Identity = 138/217 (63.59%), Postives = 157/217 (72.35%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCSKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCDLPIHS +ELT+ HDRFLLTGV L   S+ N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDLPIHSVNELTQKHDRFLLTGVKLSCESSGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FD+FLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDEFLDS 180

Query: 181 SS------AFCKRDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKSDEVDGDWVFLFVDDLVELETSADS 216

[Close]

BLAST of Sed0018705 vs. NCBI nr
Match: XP_023525379.1 (B-box zinc finger protein 21-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 4.0e-64
Identity = 138/217 (63.59%), Postives = 155/217 (71.43%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD  VH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCNKDEALLFCTADDAALCSTCDHSVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCD PIHS +ELT+ HDRFLLTGV L   SA N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDFPIHSVNELTQKHDRFLLTGVKLSCVSAGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FDDFLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDDFLDS 180

Query: 181 SS------AFCKRDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKSDEVDGDWVFQFVDDLVELETSADS 216

[Close]

BLAST of Sed0018705 vs. NCBI nr
Match: KAG6608570.1 (B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 139/219 (63.47%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCNKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCD PIHS +ELT+ HDRFLLTGV L   SA N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDFPIHSVNELTQKHDRFLLTGVKLSCESAGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FDDFLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDDFLDS 180

Query: 181 SS------AFCK--RDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK   D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKLQSDEVDGDWVFQFVDDLVELETSADS 218

[Close]

BLAST of Sed0018705 vs. NCBI nr
Match: XP_022940033.1 (B-box zinc finger protein 21-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-63
Identity = 139/219 (63.47%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCNKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCD PIHS +ELT+ HDRFLLTGV L   SA N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDFPIHSVNELTQKHDRFLLTGVKLSCESAGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FDDFLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDDFLDS 180

Query: 181 SS------AFCK--RDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK   D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKLQSDEVDGDWVFQFVDDLVELETSGDS 218

[Close]

BLAST of Sed0018705 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-40
Identity = 96/220 (43.64%), Postives = 125/220 (56.82%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRF----PLHSNNHFLLC 60
           MKI+CDVC KEEA +FCTAD+A++C  CD +VH AN LA+KHLRF    P  SN    LC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLSAANA-------- 120
           D+CQ+++A LFCQQDRAILC DCD  IH+++E T+ HDRFLLTGV LSA ++        
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 -------------------PPPVLHSPSVAESSTSNAPVAAENG-------------VSE 174
                              PPP+    S    S    P +  NG             +SE
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISE 180

[Close]

BLAST of Sed0018705 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.8e-34
Identity = 88/211 (41.71%), Postives = 114/211 (54.03%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHSN--NHFLLCDV 60
           MKI C VC KEEA +FC AD+AA+C+ CD  VH AN LA KHLRF L S       LCD+
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLSAA-NAPPPVLHSPS 120
           C ERRA LFCQ+DRAILC +CD+PIH ++E T+ H+RFLLTGV +SA+ +A P   +S S
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 VA---------ESSTSNAPVAAEN------------------------------------ 164
            A         +S +S  P +A N                                    
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCTG 180

[Close]

BLAST of Sed0018705 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHS-NNHFLLCDVC 60
           MKIQCDVC+K  A + C AD+AA+C  CD  +H AN LA+KH R  L+S +  F  CD+C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLS 105
           QE+ AF+FC +DRA+LC DCD  IH ++  + NH RFL TG+ ++
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of Sed0018705 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 4.9e-25
Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLH-SNNHFLLCDVC 60
           MKIQC+VC+  EA + C AD+AA+C ACD+++H AN LA KH R PL  S +    CD+C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTG--VHLSAANAPPPVLHSPS 120
           QE   F FC QDRA+LC  CD+ IH+ +     H RFLLTG  V L + +  P    SP+
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 VAESSTSNAP 128
             + +    P
Sbjct: 121 NDDKTMETKP 130

[Close]

BLAST of Sed0018705 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 6.5e-25
Identity = 66/167 (39.52%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHS-NNHFLLCDVC 60
           MKIQCDVC+K  A L C AD+AA+C+ CD  VH AN LA+KH R  L S +  F  CD+C
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  QERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL----SAANAPPPVLHS 120
            E+ AF+FC +DRA+LC DCD   H+ +  + NH RFL TG+ +    ++ N      H 
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120

Query: 121 PSVAESSTSNAPVAAENGVSEYLIEGISGWNFDDFLDSSSAFCKRDD 163
               + S S  P       S         W  D+F   S   C   +
Sbjct: 121 DPSNQQSLSKPPTQQPAAPSPL-------WATDEFFSYSDLDCSNKE 160

[Close]

BLAST of Sed0018705 vs. ExPASy TrEMBL
Match: A0A6J1FIW5 (B-box zinc finger protein 21-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445789 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.6e-65
Identity = 139/217 (64.06%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCNKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCD PIHS +ELT+ HDRFLLTGV L   SA N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDFPIHSVNELTQKHDRFLLTGVKLSCESAGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FDDFLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDDFLDS 180

Query: 181 SS------AFCKRDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKSDEVDGDWVFQFVDDLVELETSGDS 216

[Close]

BLAST of Sed0018705 vs. ExPASy TrEMBL
Match: A0A6J1J0U8 (B-box zinc finger protein 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480878 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.5e-64
Identity = 138/217 (63.59%), Postives = 157/217 (72.35%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCSKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCDLPIHS +ELT+ HDRFLLTGV L   S+ N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDLPIHSVNELTQKHDRFLLTGVKLSCESSGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FD+FLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDEFLDS 180

Query: 181 SS------AFCKRDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKSDEVDGDWVFLFVDDLVELETSADS 216

[Close]

BLAST of Sed0018705 vs. ExPASy TrEMBL
Match: A0A6J1FN66 (B-box zinc finger protein 21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445789 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.1e-63
Identity = 139/219 (63.47%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCNKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCD PIHS +ELT+ HDRFLLTGV L   SA N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDFPIHSVNELTQKHDRFLLTGVKLSCESAGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FDDFLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDDFLDS 180

Query: 181 SS------AFCK--RDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK   D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKLQSDEVDGDWVFQFVDDLVELETSGDS 218

[Close]

BLAST of Sed0018705 vs. ExPASy TrEMBL
Match: A0A6J1C6M2 (B-box zinc finger protein 20-like OS=Momordica charantia OX=3673 GN=LOC111007828 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.7e-63
Identity = 136/228 (59.65%), Postives = 154/228 (67.54%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCD C K+EA+LFCTADDAA+C ACD RVH ANILA+KH RFPL   SN+HF LCD+
Sbjct: 30  MKIQCDACNKDEALLFCTADDAALCEACDHRVHRANILASKHHRFPLLHPSNDHFPLCDI 89

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLS-------------- 120
           CQERRAFLFCQQDRAILC DCDLPIH+ +ELT+ HDRFLLTG+ LS              
Sbjct: 90  CQERRAFLFCQQDRAILCRDCDLPIHAVNELTQKHDRFLLTGIKLSCVSALNAASSSSEA 149

Query: 121 ----------------AANAPPPVLHSPSVAESSTSNAPVAAENG--------VSEYLIE 180
                            ANA  PV HSPS+AESS SN PVAA +         VSEYLIE
Sbjct: 150 SFAFNSDPNSQPLFEKTANASAPVSHSPSLAESSMSNVPVAAASADGGDPTDTVSEYLIE 209

Query: 181 GISGWNFDDFLDSSSA---FCKRDDVDGDWIFPFVDTLLELEMSTDSM 186
            I GWN ++FLDSSSA   F K    DGDW+FPF+D L+ELE S DS+
Sbjct: 210 TIPGWNLEEFLDSSSAPFGFYKLQSDDGDWVFPFLDDLVELETSRDSL 257

[Close]

BLAST of Sed0018705 vs. ExPASy TrEMBL
Match: A0A6J1J300 (B-box zinc finger protein 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480878 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.7e-63
Identity = 138/219 (63.01%), Postives = 157/219 (71.69%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPL--HSNNHFLLCDV 60
           MKIQCDVC K+EA+LFCTADDAA+CS CD RVH AN+LA+KHLRFPL   +NN+F LCD+
Sbjct: 1   MKIQCDVCSKDEALLFCTADDAALCSTCDHRVHHANVLASKHLRFPLLHPNNNNFPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHL---SAANAP------ 120
           CQERRAFLFCQQDRAILC DCDLPIHS +ELT+ HDRFLLTGV L   S+ N P      
Sbjct: 61  CQERRAFLFCQQDRAILCKDCDLPIHSVNELTQKHDRFLLTGVKLSCESSGNVPSSSSMS 120

Query: 121 --------PPVLHSPSVAESSTSNAPVA--------AENGVSEYLIEGISGWNFDDFLDS 180
                    PV +SPS+AESSTSNA           A NGV EY I+ ISGW+FD+FLDS
Sbjct: 121 EKMANASSAPVSNSPSIAESSTSNAQTVGASTDGCEAMNGV-EYFIDAISGWHFDEFLDS 180

Query: 181 SS------AFCK--RDDVDGDWIFPFVDTLLELEMSTDS 185
           SS       FCK   D+VDGDW+F FVD L+ELE S DS
Sbjct: 181 SSTDAPPFGFCKLQSDEVDGDWVFLFVDDLVELETSADS 218

[Close]

BLAST of Sed0018705 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-41
Identity = 96/220 (43.64%), Postives = 125/220 (56.82%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRF----PLHSNNHFLLC 60
           MKI+CDVC KEEA +FCTAD+A++C  CD +VH AN LA+KHLRF    P  SN    LC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLSAANA-------- 120
           D+CQ+++A LFCQQDRAILC DCD  IH+++E T+ HDRFLLTGV LSA ++        
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 -------------------PPPVLHSPSVAESSTSNAPVAAENG-------------VSE 174
                              PPP+    S    S    P +  NG             +SE
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISE 180

[Close]

BLAST of Sed0018705 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-35
Identity = 88/211 (41.71%), Postives = 114/211 (54.03%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHSN--NHFLLCDV 60
           MKI C VC KEEA +FC AD+AA+C+ CD  VH AN LA KHLRF L S       LCD+
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLSAA-NAPPPVLHSPS 120
           C ERRA LFCQ+DRAILC +CD+PIH ++E T+ H+RFLLTGV +SA+ +A P   +S S
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 VA---------ESSTSNAPVAAEN------------------------------------ 164
            A         +S +S  P +A N                                    
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSGSGSGCTG 180

[Close]

BLAST of Sed0018705 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 121.3 bits (303), Expect = 8.4e-28
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHS-NNHFLLCDVC 60
           MKIQCDVC+K  A + C AD+AA+C  CD  +H AN LA+KH R  L+S +  F  CD+C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLS 105
           QE+ AF+FC +DRA+LC DCD  IH ++  + NH RFL TG+ ++
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of Sed0018705 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 121.3 bits (303), Expect = 8.4e-28
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLHS-NNHFLLCDVC 60
           MKIQCDVC+K  A + C AD+AA+C  CD  +H AN LA+KH R  L+S +  F  CD+C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  QERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTGVHLS 105
           QE+ AF+FC +DRA+LC DCD  IH ++  + NH RFL TG+ ++
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105

[Close]

BLAST of Sed0018705 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 115.9 bits (289), Expect = 3.5e-26
Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 0


Query: 1   MKIQCDVCKKEEAVLFCTADDAAVCSACDDRVHGANILAAKHLRFPLH-SNNHFLLCDVC 60
           MKIQC+VC+  EA + C AD+AA+C ACD+++H AN LA KH R PL  S +    CD+C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  QERRAFLFCQQDRAILCCDCDLPIHSSSELTRNHDRFLLTG--VHLSAANAPPPVLHSPS 120
           QE   F FC QDRA+LC  CD+ IH+ +     H RFLLTG  V L + +  P    SP+
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 VAESSTSNAP 128
             + +    P
Sbjct: 121 NDDKTMETKP 130

The following BLAST results are available for this feature:

BLAST of Sed0018705 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940034.1	1.4e-64	64.06	B-box zinc finger protein 21-like isoform X2 [Cucurbita moschata]	[more]
XP_022981860.1	3.0e-64	63.59	B-box zinc finger protein 21-like isoform X2 [Cucurbita maxima]	[more]
XP_023525379.1	4.0e-64	63.59	B-box zinc finger protein 21-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6608570.1	2.6e-63	63.47	B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940033.1	4.4e-63	63.47	B-box zinc finger protein 21-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0018705 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ7	2.4e-40	43.64	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q0IGM7	5.8e-34	41.71	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q96288	1.2e-26	52.38	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SYM2	4.9e-25	46.15	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q9SID1	6.5e-25	39.52	B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2	[more]

BLAST of Sed0018705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIW5	6.6e-65	64.06	B-box zinc finger protein 21-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J0U8	1.5e-64	63.59	B-box zinc finger protein 21-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FN66	2.1e-63	63.47	B-box zinc finger protein 21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1C6M2	4.7e-63	59.65	B-box zinc finger protein 20-like OS=Momordica charantia OX=3673 GN=LOC111007828...	[more]
A0A6J1J300	4.7e-63	63.01	B-box zinc finger protein 21-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Sed0018705 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75540.1	1.7e-41	43.64	salt tolerance homolog2	[more]
AT4G39070.1	4.1e-35	41.71	B-box zinc finger family protein	[more]
AT1G06040.2	8.4e-28	52.38	B-box zinc finger family protein	[more]
AT1G06040.1	8.4e-28	52.38	B-box zinc finger family protein	[more]
AT1G78600.1	3.5e-26	46.15	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 1.8E-6 score: 37.5 coord: 51..98 e-value: 1.1E-10 score: 51.5
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 55..94 e-value: 3.9E-5 score: 23.7 coord: 3..34 e-value: 5.5E-7 score: 29.6
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.708077
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 51..98 score: 9.897286
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..96 e-value: 6.3E-7 score: 31.8
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 120..159
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..118
None	No IPR available	PANTHER	PTHR31832:SF18	B-BOX ZINC FINGER PROTEIN 21	coord: 1..118 coord: 120..159
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 55..98 e-value: 4.81788E-13 score: 58.8483
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 1.88262E-13 score: 60.0039

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018705.1	Sed0018705.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding