Sed0018674 (gene) Chayote v1

Overview


Name	Sed0018674
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dof zinc finger protein DOF1.7-like
Location	LG06: 45776914 .. 45778128 (-)
RNA-Seq Expression	Sed0018674
Synteny	Sed0018674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAAATTTCTTCCTCGCCGGAAAAATTCCCGTCGCCGGCAACTCTCTTTCTCCGACATCCAAAATCACCATTAAATCAAACAAAAGAAACCCAATTGAGATTTTTGTGTATTTTTCTTCATAAAGTGACATATTTTTCCATTGATTTGCGTTTTAGAAGCCATGAAAGCTACAGCTTGAAGATTTTTTCTTTTTGCTCTGTTTTAGTCTCTGTTTTTTTCTCACAACAAAATCTCCAAATCCTTTTTGCCTTTTTCAATTTCTCATCTTAGATCATCAAAGATTCATCTCGAAAACCAAAACCCAAATCCCCAATTTTCTCATAAAATTTTCTCGGGAAAGTTTTTGATTTAGTGCTCTGTTTTTTTATTTTCTGGGTAACCAAACAATGCAAGACCCATCAAATTTTCCGGCGATCAATCCACAATTTCCCGAACAAGAACAGCTTAAATGTCCCCGTTGTGATTCTTCCAACACCAAATTTTGCTATTACAATAACTACAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGCCGCTACTGGACCAAAGGCGGCGCTCTGCGCAACATCCCCGTCGGCGGCGGCTGCCGGAAAAACTCCAAGCGGGCGGCGGCGGCGGCCACCGTCAAACGCCCGCCGTCTTCCTCCTCTTCGTCGTCTCCGACCTCGACGCCGAACCCAATTACGGGCCCGGATCATAATCCGATTCGGGTCGTCGGCAGCGGCGGCGGGTTGGAAATTCCGGTGAGTTTCAGCTCGCTTCTGGCGTCGAATGGGCAATTTGGAAATCTGTTGGAGGGTGTGGATTCGAATCAAGCGGAGATTAAAATGGTGGAATTTGGGGAATTTTCAGGGAATTTGGATTCTGGGTCTGGCCGGAAATCTGCGGCGGAGGAACAGAGCGCCGCCGTGCCGGATCTTTGTTGGACCGGCGGCGGGAGTAATGGGTGGCCGGATCTTTCCATTTTTACACCAGGTTCAAGTTATCAGTAAACAGAGAACAAAAATATTGTTTTTCTTATTGTGTGTTTTTGTTTTCGTTTGTTTTTTGTCTTTTTTTTATTTCAATTTTAAATTGATGGGTTGTGGAGTTTTATGAAGAAAATAGATCAAAATTTTTTGTTGATGTTTTTAATAGTATCAATATGAGATAAATCTAAAACTTTAGTTACATTTTACATAGAGTTTTTCTTTTAGATTAGTGGGC

mRNA sequence

CATCAAATTTCTTCCTCGCCGGAAAAATTCCCGTCGCCGGCAACTCTCTTTCTCCGACATCCAAAATCACCATTAAATCAAACAAAAGAAACCCAATTGAGATTTTTGTGTATTTTTCTTCATAAAGTGACATATTTTTCCATTGATTTGCGTTTTAGAAGCCATGAAAGCTACAGCTTGAAGATTTTTTCTTTTTGCTCTGTTTTAGTCTCTGTTTTTTTCTCACAACAAAATCTCCAAATCCTTTTTGCCTTTTTCAATTTCTCATCTTAGATCATCAAAGATTCATCTCGAAAACCAAAACCCAAATCCCCAATTTTCTCATAAAATTTTCTCGGGAAAGTTTTTGATTTAGTGCTCTGTTTTTTTATTTTCTGGGTAACCAAACAATGCAAGACCCATCAAATTTTCCGGCGATCAATCCACAATTTCCCGAACAAGAACAGCTTAAATGTCCCCGTTGTGATTCTTCCAACACCAAATTTTGCTATTACAATAACTACAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGCCGCTACTGGACCAAAGGCGGCGCTCTGCGCAACATCCCCGTCGGCGGCGGCTGCCGGAAAAACTCCAAGCGGGCGGCGGCGGCGGCCACCGTCAAACGCCCGCCGTCTTCCTCCTCTTCGTCGTCTCCGACCTCGACGCCGAACCCAATTACGGGCCCGGATCATAATCCGATTCGGGTCGTCGGCAGCGGCGGCGGGTTGGAAATTCCGGTGAGTTTCAGCTCGCTTCTGGCGTCGAATGGGCAATTTGGAAATCTGTTGGAGGGTGTGGATTCGAATCAAGCGGAGATTAAAATGGTGGAATTTGGGGAATTTTCAGGGAATTTGGATTCTGGGTCTGGCCGGAAATCTGCGGCGGAGGAACAGAGCGCCGCCGTGCCGGATCTTTGTTGGACCGGCGGCGGGAGTAATGGGTGGCCGGATCTTTCCATTTTTACACCAGGTTCAAGTTATCAGTAAACAGAGAACAAAAATATTGTTTTTCTTATTGTGTGTTTTTGTTTTCGTTTGTTTTTTGTCTTTTTTTTATTTCAATTTTAAATTGATGGGTTGTGGAGTTTTATGAAGAAAATAGATCAAAATTTTTTGTTGATGTTTTTAATAGTATCAATATGAGATAAATCTAAAACTTTAGTTACATTTTACATAGAGTTTTTCTTTTAGATTAGTGGGC

Coding sequence (CDS)

ATGCAAGACCCATCAAATTTTCCGGCGATCAATCCACAATTTCCCGAACAAGAACAGCTTAAATGTCCCCGTTGTGATTCTTCCAACACCAAATTTTGCTATTACAATAACTACAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGCCGCTACTGGACCAAAGGCGGCGCTCTGCGCAACATCCCCGTCGGCGGCGGCTGCCGGAAAAACTCCAAGCGGGCGGCGGCGGCGGCCACCGTCAAACGCCCGCCGTCTTCCTCCTCTTCGTCGTCTCCGACCTCGACGCCGAACCCAATTACGGGCCCGGATCATAATCCGATTCGGGTCGTCGGCAGCGGCGGCGGGTTGGAAATTCCGGTGAGTTTCAGCTCGCTTCTGGCGTCGAATGGGCAATTTGGAAATCTGTTGGAGGGTGTGGATTCGAATCAAGCGGAGATTAAAATGGTGGAATTTGGGGAATTTTCAGGGAATTTGGATTCTGGGTCTGGCCGGAAATCTGCGGCGGAGGAACAGAGCGCCGCCGTGCCGGATCTTTGTTGGACCGGCGGCGGGAGTAATGGGTGGCCGGATCTTTCCATTTTTACACCAGGTTCAAGTTATCAGTAA

Protein sequence

MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEIPVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPDLCWTGGGSNGWPDLSIFTPGSSYQ

Homology

[Close]

BLAST of Sed0018674 vs. NCBI nr
Match: KAG6606726.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337.4 bits (864), Expect = 8.4e-89
Identity = 171/214 (79.91%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A +ATVKRPPSSSSSSS  ST NPITGPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSTLNPITGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLE +D NQ E+KM+E G FS NL+SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. NCBI nr
Match: XP_023523362.1 (dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 170/214 (79.44%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A +ATVKRPPSSSSSSS  S  NPI GPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPIAGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLE +D NQ E+KM+E G FSGNL+SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. NCBI nr
Match: KAG7036441.1 (Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.1 bits (858), Expect = 4.2e-88
Identity = 170/214 (79.44%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A +ATVKRPPSSSSSSS  S  NPITGPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPITGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLE +D NQ E+KM+E G FS NL+SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. NCBI nr
Match: XP_022997902.1 (dof zinc finger protein DOF1.7-like [Cucurbita maxima])

HSP 1 Score: 334.7 bits (857), Expect = 5.5e-88
Identity = 170/214 (79.44%), Postives = 179/214 (83.64%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A + TVKRPPSSSSSSS  S  NPITGPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSTTVKRPPSSSSSSSSGSMRNPITGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLEG+D NQ E+KM+E G FS NL SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. NCBI nr
Match: XP_022948818.1 (dof zinc finger protein DOF1.7-like [Cucurbita moschata])

HSP 1 Score: 334.0 bits (855), Expect = 9.3e-88
Identity = 169/214 (78.97%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQ+PEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A +ATVKRPPSSSSSSS  S  NPITGPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPITGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLE +D NQ E+KM+E G FS NL+SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35
Identity = 83/138 (60.14%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRK 71
           PQF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGGALRN+PVGGG RK
Sbjct: 21  PQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRK 80

Query: 72  N-SKRAAAAATVKRPPSSSSSSSPTSTPNP------ITGPDHNPIRV-----VGSGG--G 131
           N +KR+ ++++    PS+SS +  T  P+P         PD +P R+     +G     G
Sbjct: 81  NATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFPIGDQDVKG 140

Query: 132 LEIPVSFSSLLASNGQFG 136
           +EI  SFSSLLA+N Q G
Sbjct: 141 MEIGGSFSSLLANNMQLG 158

[Close]

BLAST of Sed0018674 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 81/135 (60.00%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRK 71
           P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG RK
Sbjct: 25  PELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 84

Query: 72  NSKRAAAA-------ATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVV-GSGGGLEIPVS 131
           ++KR+ ++        TV   P    S S       ++G + NP R++ G   G     S
Sbjct: 85  SNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEER-VSGQEMNPTRMLYGLPVGDPNGAS 144

Query: 132 FSSLLASNGQFGNLL 139
           FSSLLASN Q G L+
Sbjct: 145 FSSLLASNMQMGGLV 158

[Close]

BLAST of Sed0018674 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.9e-27
Identity = 68/114 (59.65%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 18  EQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSKRAA 77
           + LKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGGCRK     A
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK-----A 108

Query: 78  AAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEIPVSFSSLLASN 132
             +  K+ PSSSS+  PT+T +     DH+      S  G       SSL ASN
Sbjct: 109 KRSKTKQVPSSSSADKPTTTQD-----DHHVEE--KSSTGSHSSSESSSLTASN 150

[Close]

BLAST of Sed0018674 vs. ExPASy Swiss-Prot
Match: Q6Z345 (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-27
Identity = 68/122 (55.74%), Postives = 77/122 (63.11%), Query Frame = 0


Query: 15  PEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSK 74
           P  E +KCPRC+S+NTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRN+PVGGGCRK   
Sbjct: 40  PSPEAVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK--- 99

Query: 75  RAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEIPVSFSSLLASNGQF 134
                   KR  SSS++SS  STP   T    N  R            S SS  +S+G  
Sbjct: 100 -------TKRSGSSSAASSAPSTPTAATDNAKNQRR-----------ASASSPRSSSGGS 140

Query: 135 GN 137
           GN
Sbjct: 160 GN 140

[Close]

BLAST of Sed0018674 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 7.3e-27
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 20  LKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSKRAAAA 79
           LKCPRCDSSNTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGGCR+N+K+    
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK-GKN 136

Query: 80  ATVKRPPSSSSSSSPTSTPNPITG 104
             +K   SSS  SS  +  +P +G
Sbjct: 137 GNLKSSSSSSKQSSSVNAQSPSSG 159

[Close]

BLAST of Sed0018674 vs. ExPASy TrEMBL
Match: A0A6J1K6C2 (dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.6e-88
Identity = 170/214 (79.44%), Postives = 179/214 (83.64%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A + TVKRPPSSSSSSS  S  NPITGPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSTTVKRPPSSSSSSSSGSMRNPITGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLEG+D NQ E+KM+E G FS NL SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. ExPASy TrEMBL
Match: A0A6J1GAD4 (dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC111452370 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.5e-88
Identity = 169/214 (78.97%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP I PQ+PEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKN+KR A +ATVKRPPSSSSSSS  S  NPITGPDHNPIR  G GGGLEI
Sbjct: 61  RNIPVGGGSRKNAKRPAVSATVKRPPSSSSSSSSGSMLNPITGPDHNPIR--GYGGGLEI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQ+GNLLE +D NQ E+KM+E G FS NL+SGSGRKSAAEEQS  VP+ 
Sbjct: 121 PGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CWTGGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0018674 vs. ExPASy TrEMBL
Match: A0A5A7UYP4 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00020 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 168/214 (78.50%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS F  I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKNSKR A AATVKRPPSSSSS+     PNPI  PDHNPIR  G GGGL+I
Sbjct: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSTH----PNPIAVPDHNPIR--GYGGGLDI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQFGNLLEGVD NQ+E+KMVE GEF     SGSGRKSAAEEQSA VP+ 
Sbjct: 121 PGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSATVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CW+GGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Sed0018674 vs. ExPASy TrEMBL
Match: A0A1S3BHT0 (dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 168/214 (78.50%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS F  I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKNSKR A AATVKRPPSSSSS+     PNPI  PDHNPIR  G GGGL+I
Sbjct: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSSSSTH----PNPIAVPDHNPIR--GYGGGLDI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQFGNLLEGVD NQ+E+KMVE GEF     SGSGRKSAAEEQSA VP+ 
Sbjct: 121 PGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSATVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CW+GGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Sed0018674 vs. ExPASy TrEMBL
Match: A0A0A0LDG2 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.7e-83
Identity = 167/214 (78.04%), Postives = 175/214 (81.78%), Query Frame = 0


Query: 1   MQDPSNFPAINPQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS F  I PQFPEQEQLKCPRCDS+NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGCRKNSKRAAAAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEI 120
           RNIPVGGG RKNSKR A AATVKRPPSS+SS+     PN IT PDHNPIR  G GGGL+I
Sbjct: 61  RNIPVGGGTRKNSKR-AVAATVKRPPSSTSSTH----PNTITVPDHNPIR--GYGGGLDI 120

Query: 121 PVSFSSLLASNGQFGNLLEGVDSNQAEIKMVEFGEFSGNLDSGSGRKSAAEEQSAAVPD- 180
           P SFSSLLASNGQFGNLLEGVD NQ+E+KMVE GEF     SGSGRKSAAEEQSA VP+ 
Sbjct: 121 PGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSAGVPEN 180

Query: 181 ----------LCWTGGGSNGWPDLSIFTPGSSYQ 204
                      CW GGGSNGWPDL+IFTPGSSYQ
Sbjct: 181 YLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Sed0018674 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 83/138 (60.14%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRK 71
           PQF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGGALRN+PVGGG RK
Sbjct: 21  PQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRK 80

Query: 72  N-SKRAAAAATVKRPPSSSSSSSPTSTPNP------ITGPDHNPIRV-----VGSGG--G 131
           N +KR+ ++++    PS+SS +  T  P+P         PD +P R+     +G     G
Sbjct: 81  NATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFPIGDQDVKG 140

Query: 132 LEIPVSFSSLLASNGQFG 136
           +EI  SFSSLLA+N Q G
Sbjct: 141 MEIGGSFSSLLANNMQLG 158

[Close]

BLAST of Sed0018674 vs. TAIR 10
Match: AT1G51700.1 (DOF zinc finger protein 1 )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 81/135 (60.00%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRK 71
           P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGG RK
Sbjct: 25  PELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 84

Query: 72  NSKRAAAA-------ATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVV-GSGGGLEIPVS 131
           ++KR+ ++        TV   P    S S       ++G + NP R++ G   G     S
Sbjct: 85  SNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEER-VSGQEMNPTRMLYGLPVGDPNGAS 144

Query: 132 FSSLLASNGQFGNLL 139
           FSSLLASN Q G L+
Sbjct: 145 FSSLLASNMQMGGLV 158

[Close]

BLAST of Sed0018674 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 68/114 (59.65%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 18  EQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSKRAA 77
           + LKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGGCRK     A
Sbjct: 49  QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK-----A 108

Query: 78  AAATVKRPPSSSSSSSPTSTPNPITGPDHNPIRVVGSGGGLEIPVSFSSLLASN 132
             +  K+ PSSSS+  PT+T +     DH+      S  G       SSL ASN
Sbjct: 109 KRSKTKQVPSSSSADKPTTTQD-----DHHVEE--KSSTGSHSSSESSSLTASN 150

[Close]

BLAST of Sed0018674 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-28
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 20  LKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSKRAAAA 79
           LKCPRCDSSNTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGGCR+N+K+    
Sbjct: 77  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK-GKN 136

Query: 80  ATVKRPPSSSSSSSPTSTPNPITG 104
             +K   SSS  SS  +  +P +G
Sbjct: 137 GNLKSSSSSSKQSSSVNAQSPSSG 159

[Close]

BLAST of Sed0018674 vs. TAIR 10
Match: AT1G07640.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-28
Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 20  LKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGCRKNSKRAAAA 79
           LKCPRCDSSNTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGGCR+N+K+    
Sbjct: 21  LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKK-GKN 80

Query: 80  ATVKRPPSSSSSSSPTSTPNPITG 104
             +K   SSS  SS  +  +P +G
Sbjct: 81  GNLKSSSSSSKQSSSVNAQSPSSG 103

The following BLAST results are available for this feature:

BLAST of Sed0018674 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606726.1	8.4e-89	79.91	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023523362.1	1.9e-88	79.44	dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036441.1	4.2e-88	79.44	Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022997902.1	5.5e-88	79.44	dof zinc finger protein DOF1.7-like [Cucurbita maxima]	[more]
XP_022948818.1	9.3e-88	78.97	dof zinc finger protein DOF1.7-like [Cucurbita moschata]	[more]

BLAST of Sed0018674 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AR6	2.5e-35	60.14	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
O82155	2.8e-34	60.00	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q8LDR0	1.9e-27	59.65	Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV...	[more]
Q6Z345	2.5e-27	55.74	Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ...	[more]
Q8L9V6	7.3e-27	67.86	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]

BLAST of Sed0018674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K6C2	2.6e-88	79.44	dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 ...	[more]
A0A6J1GAD4	4.5e-88	78.97	dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC11145237...	[more]
A0A5A7UYP4	1.5e-83	78.50	Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BHT0	1.5e-83	78.50	dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4...	[more]
A0A0A0LDG2	9.7e-83	78.04	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE...	[more]

BLAST of Sed0018674 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21270.1	1.8e-36	60.14	DOF zinc finger protein 2	[more]
AT1G51700.1	2.0e-35	60.00	DOF zinc finger protein 1	[more]
AT5G60850.1	1.4e-28	59.65	OBF binding protein 4	[more]
AT1G07640.2	5.2e-28	67.86	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.1	5.2e-28	67.86	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 18..74 e-value: 3.4E-33 score: 113.6
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 22..58
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 20..74 score: 29.729893
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..112
None	No IPR available	PANTHER	PTHR31992:SF153	DOF ZINC FINGER PROTEIN DOF3.1-LIKE	coord: 2..203
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 2..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018674.1	Sed0018674.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding