Sed0018661 (gene) Chayote v1

Overview


Name	Sed0018661
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Non-structural maintenance of chromosomes element 4
Location	LG08: 12705012 .. 12707839 (-)
RNA-Seq Expression	Sed0018661
Synteny	Sed0018661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAATGTTCTTTCCAAATTCAAAACCCACAATTCTCGACTCTCCAAATTCCTCTGCAACTCTCCGATTTCTCACCAATTCTCCATTCTCCGCCTCTACTTTAAACCCTAATTTCAAAATTAGGGTTTCCGTTGCCCAATCGCGACGATGAGGCCCGTCAAACGCGAACCCGCAGCCACCATCAGCCGCAGTAATGACCAGAGTTCCGGCGCCAGCGCCGGCGCAGCCGGTGCTGCGAGTTTAAGGGATGTTAAGCGGGAGAGAGTTGCTCGGGAGCGAGAGAACTCCGGCGAGGAAAACGCTGCTGAAGAAGAAGAAGAAGAGGGTCAACAAGAAGACTTGTCGAAACGGCGGTTTCTTCGTTCTCGGTACCTTGCGGTCATTCATGAGATTGGTGGTATGATCAACCTCATTGTATTTTGTATTACTATTGGATTTAAGTTTTTGTGGGTAATCGGGGTTTTTGTTTTGGGTTTCTTGTGTTTGAAGAAAGAAGAGAGGATTTGTCTAAGGATTCGGATAAGTTCGATGTTATCTTCAAAGAGGTGGAAAAGTTGCACGAGCAAGGTATTTATTTATATGGTTTCTTTTGCTTCTTGTTTACAATGAAGAACTGCTGAATCTTCTATTTAAAATTTCCAACAAAAGAACAGTAAAATAATCCACCGTCCCACCTACCTAGGAATTAATTTACATCCAAATATTATAGGATAAGACAATATGTCACGTGACATTAGTTAAAAAATCAAAAGAAAAACATGTCCGTTGTTTTCTACTGCATTCCTACATTCATGTAAGTTTGAAAGGGGGCTTGTTAATTTGCTTCGCTTCCATATACCTGGCGGCACCCACACCCATCCTAACGGTTGGGCCTGGAGATAACAATAGATTGCTCAATTTGTGGGTCATGAACTTGAGGTTCCAAGTCTCAATCAATGAGTCCGCCTCTTGGGAACTTTTTGATATTGTTATTCTTGTAACATGGTTGTGTTTTCATCTGGGTTTCAGTTCAGAATCCAAGGGAACAAATTGCAGATGCAGAAGCTTTGCATGATATTGCAAACTCCCTCATGACCTGTATTAAGTCCCAGTCAAATGATGGCGTTACTCCATCAGATTTTGTGAGTTGTCTGCTCAGAGAGTTTGCCATCGAAGGTGGTGGTATTACATCTGAGGAAAACGATATGGTATCTATCAGTTGGAAAGATATTGGACTAAGTGTTTCGTCTATTTTCAAGAATGGCCATGGATGCTGCACCATGTGAGATTCATAGATTCCTCTTTCTCTATAACTTTATGCTAAAGTGGCTTTAATGTATGTTTTCTTTAATCTATTATATAATTTTCTTTGTTGTGTATTTTTTTTTTCAAGGCTTGGACCTATGAGTACTCAGTTGAAGCAGCGAAAGACTAATATTTCCCGGAAACGTTCCAAGCTTCCTGAAAGTTCAAAACCTGCACAGGTCAGACTGTGAAGATTTCAATATTTAAGTATCTTTGGATTGAGTCATCTGTCACTCGGTTCCGAGCCTTGTTAACTTGTTGCTGTGACTGTGACCTATAAACGGTGTTGCTAATTCCTTCTCACAATCAACTTTTTTAGAACTTTATTTATGTGGAGATTAGTATATGTGTGTTAGATTTATTAAATGGATGATTGAGTGCCCAATTTGACCAAAAGTGCAGATATTTCTTTTCTGTTTGGACATATTATTGAACTTGCTAATGTTTCATTCATCTGGACCTTACAAAGACTTTTTGTCCCTCAAGCTTACCTGTTTAACGTTCTTTGCACATAATCTATTGCTTTGTTTTGTTTGCTCAAGTGGTTTGTAAAATAGATTGCATTTTCTGTTTGTTTTTTCATGCATTTGATATTCTATTATCTCGTTGATGCTTATTACAGGTTGATGGAAATGGATCTGAAGAAAAAACTGACACAGATAAGAACATGAGGATAATGTTTGGGATTTTGAGGAGGAATAAAGCTGTCAAACTTGAGCATCTGGTATTGAATAGAAAATCTTTTGCACAGACGGTAGAGAACTTATTTGCTCTATCCTTTCTTGCTAAGGATGGTCGGGCTGAGATAACTGTTGACAAAGATGGTTATCATTTTGTATGTGAGTAAACATCTACTACATACATAACTTCTTATGCTTTTCTTTGAAAACACTGTTCTTTGCATTATGTCACCATTTTCAGCACCGAAGAATGCCCCTGCTCATAGTGCCATTATGTCTCATGAAGTTAATTACAGTCATTTTGTATTCAGACTCGATTTTAAGGATTGGAAGGTAATGAGAAGCATTCGTTGTTATGTGGTAATTTTGCAATTTTCAATTTGCGATGTCATTTAACAGAATTCAAATATTAAAAACATGTTGTTTTATGATATATCAAATGCTGTGTACTGTTTGTTTGCAGCTGATGATTGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACTTTCTGGACGCAGCACCGGTGCCCCCAGCAGAAGCACCGGGTGACGGTTCTGAAGAAGCTGCATTGCCTAATACACCAATACGAAAGCTGTCAAGAAATCGAGGTTTAGTTATGCAATCTGTTGAGGATTCCCCTGAGAATGATGCTCGTCCAGGACCAACTGCAATTCTGAGGTGCAAGAGAAAGCTTAGTCAATAAATTGCAAACTAGGGCTCCAAAATCCATTGGAGTTGTATATTTAATGGCTACCCCTGTAAATTGGTCATTAGGTTCCAAGAGAAAATGATTGACAAATTTAAGTTTTCTAACAGAGTTTCGTTTGAGTTGTAATGATGTTTGTGGAGTACCA

mRNA sequence

CTTTAATGTTCTTTCCAAATTCAAAACCCACAATTCTCGACTCTCCAAATTCCTCTGCAACTCTCCGATTTCTCACCAATTCTCCATTCTCCGCCTCTACTTTAAACCCTAATTTCAAAATTAGGGTTTCCGTTGCCCAATCGCGACGATGAGGCCCGTCAAACGCGAACCCGCAGCCACCATCAGCCGCAGTAATGACCAGAGTTCCGGCGCCAGCGCCGGCGCAGCCGGTGCTGCGAGTTTAAGGGATGTTAAGCGGGAGAGAGTTGCTCGGGAGCGAGAGAACTCCGGCGAGGAAAACGCTGCTGAAGAAGAAGAAGAAGAGGGTCAACAAGAAGACTTGTCGAAACGGCGGTTTCTTCGTTCTCGGTACCTTGCGGTCATTCATGAGATTGGTGAAAGAAGAGAGGATTTGTCTAAGGATTCGGATAAGTTCGATGTTATCTTCAAAGAGGTGGAAAAGTTGCACGAGCAAGTTCAGAATCCAAGGGAACAAATTGCAGATGCAGAAGCTTTGCATGATATTGCAAACTCCCTCATGACCTGTATTAAGTCCCAGTCAAATGATGGCGTTACTCCATCAGATTTTGTGAGTTGTCTGCTCAGAGAGTTTGCCATCGAAGGTGGTGGTATTACATCTGAGGAAAACGATATGGTATCTATCAGTTGGAAAGATATTGGACTAAGTGTTTCGTCTATTTTCAAGAATGGCCATGGATGCTGCACCATGCTTGGACCTATGAGTACTCAGTTGAAGCAGCGAAAGACTAATATTTCCCGGAAACGTTCCAAGCTTCCTGAAAGTTCAAAACCTGCACAGGTTGATGGAAATGGATCTGAAGAAAAAACTGACACAGATAAGAACATGAGGATAATGTTTGGGATTTTGAGGAGGAATAAAGCTGTCAAACTTGAGCATCTGGTATTGAATAGAAAATCTTTTGCACAGACGGTAGAGAACTTATTTGCTCTATCCTTTCTTGCTAAGGATGGTCGGGCTGAGATAACTGTTGACAAAGATGGTTATCATTTTGTATAATGCCCCTGCTCATAGTGCCATTATGTCTCATGAAGTTAATTACAGTCATTTTGTATTCAGACTCGATTTTAAGGATTGGAAGCTGATGATTGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACTTTCTGGACGCAGCACCGGTGCCCCCAGCAGAAGCACCGGGTGACGGTTCTGAAGAAGCTGCATTGCCTAATACACCAATACGAAAGCTGTCAAGAAATCGAGGTTTAGTTATGCAATCTGTTGAGGATTCCCCTGAGAATGATGCTCGTCCAGGACCAACTGCAATTCTGAGGTGCAAGAGAAAGCTTAGTCAATAAATTGCAAACTAGGGCTCCAAAATCCATTGGAGTTGTATATTTAATGGCTACCCCTGTAAATTGGTCATTAGGTTCCAAGAGAAAATGATTGACAAATTTAAGTTTTCTAACAGAGTTTCGTTTGAGTTGTAATGATGTTTGTGGAGTACCA

Coding sequence (CDS)

ATGAGGCCCGTCAAACGCGAACCCGCAGCCACCATCAGCCGCAGTAATGACCAGAGTTCCGGCGCCAGCGCCGGCGCAGCCGGTGCTGCGAGTTTAAGGGATGTTAAGCGGGAGAGAGTTGCTCGGGAGCGAGAGAACTCCGGCGAGGAAAACGCTGCTGAAGAAGAAGAAGAAGAGGGTCAACAAGAAGACTTGTCGAAACGGCGGTTTCTTCGTTCTCGGTACCTTGCGGTCATTCATGAGATTGGTGAAAGAAGAGAGGATTTGTCTAAGGATTCGGATAAGTTCGATGTTATCTTCAAAGAGGTGGAAAAGTTGCACGAGCAAGTTCAGAATCCAAGGGAACAAATTGCAGATGCAGAAGCTTTGCATGATATTGCAAACTCCCTCATGACCTGTATTAAGTCCCAGTCAAATGATGGCGTTACTCCATCAGATTTTGTGAGTTGTCTGCTCAGAGAGTTTGCCATCGAAGGTGGTGGTATTACATCTGAGGAAAACGATATGGTATCTATCAGTTGGAAAGATATTGGACTAAGTGTTTCGTCTATTTTCAAGAATGGCCATGGATGCTGCACCATGCTTGGACCTATGAGTACTCAGTTGAAGCAGCGAAAGACTAATATTTCCCGGAAACGTTCCAAGCTTCCTGAAAGTTCAAAACCTGCACAGGTTGATGGAAATGGATCTGAAGAAAAAACTGACACAGATAAGAACATGAGGATAATGTTTGGGATTTTGAGGAGGAATAAAGCTGTCAAACTTGAGCATCTGGTATTGAATAGAAAATCTTTTGCACAGACGGTAGAGAACTTATTTGCTCTATCCTTTCTTGCTAAGGATGGTCGGGCTGAGATAACTGTTGACAAAGATGGTTATCATTTTGTATAA

Protein sequence

MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEGQQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADAEALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLSVSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNMRIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV

Homology

[Close]

BLAST of Sed0018661 vs. NCBI nr
Match: KAG7022067.1 (Non-structural maintenance of chromosomes element 4-like A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.1 bits (1089), Expect = 1.0e-114
Identity = 232/296 (78.38%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           M+PVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN GE N AE EE   
Sbjct: 1   MKPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGEGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEND +S+SWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFANIEGGITSEENDPISVSWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGCCTMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSEEKTDTDKNM
Sbjct: 181 VSSIFMNGHGCCTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEEKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. NCBI nr
Match: KAG6588168.1 (Non-structural maintenance of chromosomes element 4-like A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.3 bits (1087), Expect = 1.7e-114
Identity = 232/296 (78.38%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           M+PVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN GE N AE EE   
Sbjct: 1   MKPVKREPAAS-SRSNRSKGG---DAVDAANLRDVKRARVAREKENIGEGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEND +S+SWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFANIEGGITSEENDPISVSWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGCCTMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSEEKTDTDKNM
Sbjct: 181 VSSIFMNGHGCCTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEEKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. NCBI nr
Match: XP_022967561.1 (non-structural maintenance of chromosomes element 4 homolog A [Cucurbita maxima])

HSP 1 Score: 419.9 bits (1078), Expect = 1.9e-113
Identity = 232/296 (78.38%), Postives = 254/296 (85.81%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN G+ N AE EE   
Sbjct: 1   MRPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGDGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEND +SISWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENDPISISWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGC TMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSEEKTDTDKNM
Sbjct: 181 VSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEEKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. NCBI nr
Match: XP_022933648.1 (non-structural maintenance of chromosomes element 4 homolog A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-112
Identity = 230/296 (77.70%), Postives = 253/296 (85.47%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN GE N AE EE   
Sbjct: 1   MRPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGEGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEN+ +S+SWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENNPISLSWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGC TMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSE KTDTDKNM
Sbjct: 181 VSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEAKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. NCBI nr
Match: XP_022933647.1 (non-structural maintenance of chromosomes element 4 homolog A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-112
Identity = 230/296 (77.70%), Postives = 253/296 (85.47%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN GE N AE EE   
Sbjct: 1   MRPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGEGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEN+ +S+SWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENNPISLSWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGC TMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSE KTDTDKNM
Sbjct: 181 VSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEAKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. ExPASy Swiss-Prot
Match: Q9C689 (Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana OX=3702 GN=NSE4A PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-67
Identity = 153/288 (53.12%), Postives = 197/288 (68.40%), Query Frame = 0


Query: 11  TISRSNDQSSGASAGAAGAASLRDVKRERVARERENS--GEENAAEEEEEEGQQEDLSKR 70
           T+ R ++ + G          LR VK+E+  +   +S   +E    +EEE+G    +S R
Sbjct: 4   TVKRESEATGGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQG----ISDR 63

Query: 71  RFLRSRYLAVIHEIGERREDLSK-DSDKFDVIFKEVEKLHEQVQNPREQIADAEALHDIA 130
           R LRS+YL++ +EI + ++DL K DSDKF  I   VE LH+QV+ PREQIADAEAL DIA
Sbjct: 64  RILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIA 123

Query: 131 NSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLSVSSIFKN 190
           N+LM+ +KSQS  GV+P++FV+ L+  F     GI ++E   VS+ WKD+G +V S    
Sbjct: 124 NTLMSSVKSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGFAVCSTVLV 183

Query: 191 GHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNMRIMFGIL 250
             GC TMLGPM T+LKQRK   +RKR+K  E  +P +VD + SEEKTDTDKNM IMF IL
Sbjct: 184 SCGCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNIL 243

Query: 251 RRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHF 296
            + K V+LE+LVLNR+SFAQTVENLFALSFLAKDGR EI VDK G HF
Sbjct: 244 GKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHF 287

[Close]

BLAST of Sed0018661 vs. ExPASy Swiss-Prot
Match: F4JET1 (Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana OX=3702 GN=NSE4B PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-63
Identity = 132/246 (53.66%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 54  EEEEEEGQQEDLSKRRFLRSRYLAVIHEIGERREDLSK-DSDKFDVIFKEVEKLHEQVQN 113
           +EEEE+G    ++ RR +RS+YLA+ H+I + ++DL+K DS+KF+ I  EVE LH++V+ 
Sbjct: 52  QEEEEQG----IADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRK 111

Query: 114 PREQIADAEALHDIANSLMTCIKSQS-NDGVTPSDFVSCLLREFAIEGGGITSEENDMVS 173
           PREQIADAEAL D+ NS+++ +KSQS + GV+P++FV+ L+  F      I ++EN  VS
Sbjct: 112 PREQIADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVS 171

Query: 174 ISWKDIGLSVSSIFKNGHGCCTMLGPMSTQLKQRKTNI-SRKRSKLPESSKPAQVDGNGS 233
           + WKD+G +V S      GC TM+GPM +++KQRK+ + +RKR+K     KP +VD   +
Sbjct: 172 MKWKDLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEA 231

Query: 234 EEKTDTDKNMRIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDK 293
           E+K+DTD NM +MF ILR+NK VK+E+LVLNRKSFAQT EN+FALSFL KDGR EITVD 
Sbjct: 232 EKKSDTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDN 291

Query: 294 DGYHFV 297
           +G HFV
Sbjct: 292 NGSHFV 293

[Close]

BLAST of Sed0018661 vs. ExPASy Swiss-Prot
Match: Q2TBI1 (Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus OX=9913 GN=NSMCE4A PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 82/304 (26.97%), Postives = 131/304 (43.09%), Query Frame = 0


Query: 11  TISRSNDQSSGASAGAAGAASLRDVKRERVA---RERENSGEENAAEEEEEEGQQEDLSK 70
           T SRS  +S  +     GAA  R    ER      E  +SG+E       EE  + D S 
Sbjct: 24  TRSRSRSRSPLSPGSRRGAAPERREAPERPGLEDTEPSDSGDEMIDPASLEE--ETDPSL 83

Query: 71  RRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADAEAL---H 130
            R +R +Y A+I+ + + RED+   SDK   + +E   L   V   RE + DA  L    
Sbjct: 84  CRQIRHQYRALINSVQQNREDILNASDKLTEVLEEANTLFNGVSRAREAVLDAHFLVLAS 143

Query: 131 DIANSLMTCIKSQSNDGVTPSDFVSCLLREFAI---EGGGITSEEND-----MVSISWKD 190
           D+       ++S  N       +V  LL    +   E   +  +E+      +V  SWK 
Sbjct: 144 DLGKEKAKQLRSDLN-SFDMLRYVETLLTHMGVNPLEAEELIRDEDSSDLEFIVYDSWKI 203

Query: 191 IGLSVSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKL---PESSKPAQVDGNGSEEK 250
            G +  + F   H    +LG +  +    K  I R R       + + PAQ+       +
Sbjct: 204 SGKTAENTFNKTHTFHFLLGSIQGECPVPKPRIERPRKVRMIEEQQAMPAQLKRMEESHQ 263

Query: 251 TDTDKNMRIMFGILRR------NKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEIT 292
             T+K +  + G+L+       +  +     V++  SF +TVEN+F +SF+ +DG A I 
Sbjct: 264 EATEKEVERILGLLQTYFQEDPDTPMSFFDFVVDPHSFPRTVENIFHVSFIIRDGFARIR 323

[Close]

BLAST of Sed0018661 vs. ExPASy Swiss-Prot
Match: Q9NXX6 (Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens OX=9606 GN=NSMCE4A PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 80/305 (26.23%), Postives = 136/305 (44.59%), Query Frame = 0


Query: 11  TISRSNDQSSGASAGAAGAASLRDVKRERVA---RERENSGEENAAEEEEEEGQQEDLSK 70
           T SRS  +S  +     G+A  R    ER +    E  +SG+E       E    + L +
Sbjct: 24  TRSRSRSRSPLSPRSRRGSARERREAPERPSLEDTEPSDSGDEMMDPASLEAEADQGLCR 83

Query: 71  RRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADAEALHDIA 130
           +  +R +Y A+I+ + + RED+    DK   + +E   L  +V   RE + DA  L  +A
Sbjct: 84  Q--IRHQYRALINSVQQNREDILNAGDKLTEVLEEANTLFNEVSRAREAVLDAHFL-VLA 143

Query: 131 NSLMTCIKSQSNDGVTPSD---FVSCLLREFAI---EGGGITSEEND-----MVSISWKD 190
           + L      Q    ++  D   +V  LL    +   E   +  +E+      +V  SWK 
Sbjct: 144 SDLGKEKAKQLRSDLSSFDMLRYVETLLTHMGVNPLEAEELIRDEDSPDFEFIVYDSWKI 203

Query: 191 IGLSVSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLP----ESSKPAQVDGNGSEE 250
            G +  + F   H    +LG +  +    K  + R R K+P    E + PAQ+       
Sbjct: 204 TGRTAENTFNKTHTFHFLLGSIYGECPVPKPRVDRPR-KVPVIQEERAMPAQLRRMEESH 263

Query: 251 KTDTDKNMRIMFGILRR------NKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEI 292
           +  T+K +  + G+L+       +  +     V++  SF +TVEN+F +SF+ +DG A I
Sbjct: 264 QEATEKEVERILGLLQTYFREDPDTPMSFFDFVVDPHSFPRTVENIFHVSFIIRDGFARI 323

[Close]

BLAST of Sed0018661 vs. ExPASy Swiss-Prot
Match: Q6BDR8 (Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nse4 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-08
Identity = 57/232 (24.57%), Postives = 105/232 (45.26%), Query Frame = 0


Query: 68  RRFLRSRYLAVIHEIGERREDL-SKDSDKFDVIFKEVEKLHEQVQNPREQIADAEALHDI 127
           +R LR RY  +I+++ E R +L  ++++           L   V  P E   DA  L   
Sbjct: 6   KRDLRKRYRNLINKVQESRLELVDEENNNLYETITTANDLFSSVDAPTEATLDALLLTKT 65

Query: 128 ANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEEN----DMVSISWKDIGLSVS 187
            +  +  IK++      P   +    +         TS  N      +  +W  +G   S
Sbjct: 66  VD--LASIKARQLHIGRPKFNIELFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRLGKLAS 125

Query: 188 SIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPE-SSKPAQV-DGNGSEEKTDTDKNM 247
           +  K       M+GP+S + K+R      +  K P   ++P  + + N + ++ +T KN+
Sbjct: 126 NCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENNTTKNV 185

Query: 248 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDG 293
             +  +L+ ++ V     + N +S+ QTVENLF +SFL K+G+A +  ++ G
Sbjct: 186 LHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESG 235

[Close]

BLAST of Sed0018661 vs. ExPASy TrEMBL
Match: A0A6J1HSJ2 (Non-structural maintenance of chromosomes element 4 OS=Cucurbita maxima OX=3661 GN=LOC111467024 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 9.1e-114
Identity = 232/296 (78.38%), Postives = 254/296 (85.81%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN G+ N AE EE   
Sbjct: 1   MRPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGDGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEND +SISWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENDPISISWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGC TMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSEEKTDTDKNM
Sbjct: 181 VSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEEKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. ExPASy TrEMBL
Match: A0A6J1F5E6 (Non-structural maintenance of chromosomes element 4 OS=Cucurbita moschata OX=3662 GN=LOC111441004 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112
Identity = 230/296 (77.70%), Postives = 253/296 (85.47%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN GE N AE EE   
Sbjct: 1   MRPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGEGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEN+ +S+SWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENNPISLSWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGC TMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSE KTDTDKNM
Sbjct: 181 VSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEAKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. ExPASy TrEMBL
Match: A0A6J1F0F0 (Non-structural maintenance of chromosomes element 4 OS=Cucurbita moschata OX=3662 GN=LOC111441004 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112
Identity = 230/296 (77.70%), Postives = 253/296 (85.47%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREPAA+ SRSN    G    A  AA+LRDVKR RVARE+EN GE N AE EE   
Sbjct: 1   MRPVKREPAAS-SRSNQSKGG---DAVDAANLRDVKRARVAREKENIGEGNMAEAEE--- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+ L+KRR LRSRYLAVIHEI ERREDL+KDSDKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQGLTKRRVLRSRYLAVIHEISERREDLTKDSDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T IKSQSN+GVTPSDFVSCLL+EFA   GGITSEEN+ +S+SWKDIGLS
Sbjct: 121 EALQDIANSLVTSIKSQSNEGVTPSDFVSCLLKEFADIEGGITSEENNPISLSWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNM 240
           VSSIF NGHGC TMLGPMSTQLKQRKTNI+RKRS+  ESS+PA+VD +GSE KTDTDKNM
Sbjct: 181 VSSIFMNGHGCRTMLGPMSTQLKQRKTNIARKRSRPTESSRPAEVDEDGSEAKTDTDKNM 240

Query: 241 RIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
            IMFGILRRNK V+LEHL+LNR SFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 SIMFGILRRNKTVRLEHLILNRNSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 289

[Close]

BLAST of Sed0018661 vs. ExPASy TrEMBL
Match: A0A1S3BQS4 (Non-structural maintenance of chromosomes element 4 OS=Cucumis melo OX=3656 GN=LOC103492497 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.6e-110
Identity = 223/297 (75.08%), Postives = 246/297 (82.83%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRERVARERENSGEENAAEEEEEEG 60
           MRPVKREP  +     ++      GA   ASLRD KRERVARERENSGEEN +EE     
Sbjct: 1   MRPVKREPTVSTRSKRNRGGDGGGGAVDGASLRDSKRERVARERENSGEENMSEEV---- 60

Query: 61  QQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIADA 120
            Q+DL+KRR LRSRYLAVIHEI ERREDLSKD DKF+VI  EVEKLHEQVQ PREQ+ADA
Sbjct: 61  GQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADA 120

Query: 121 EALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLS 180
           EAL DIANSL+T I+SQSN+GVTPSDFVSCLLREFA   G I SEE ++VS++WKDIGLS
Sbjct: 121 EALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINGSINSEEQELVSVNWKDIGLS 180

Query: 181 VSSIFKNGHGCCTMLGPMSTQLKQRKT-NISRKRSKLPESSKPAQVDGNGSEEKTDTDKN 240
           VSSIF NG+GC TMLGPMS QLKQRKT N+ RKRSK  ESS+PA+V+ NGSE KTDTDKN
Sbjct: 181 VSSIFMNGYGCRTMLGPMSNQLKQRKTNNVPRKRSKPTESSRPAEVEDNGSEPKTDTDKN 240

Query: 241 MRIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
           M IMFGILRRNK VKLEHL+LNRKSFAQTVENLFALSFL KDGRAEIT+DK+G HFV
Sbjct: 241 MGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFV 293

[Close]

BLAST of Sed0018661 vs. ExPASy TrEMBL
Match: A0A6J1HBJ2 (Non-structural maintenance of chromosomes element 4 OS=Cucurbita moschata OX=3662 GN=LOC111461359 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.7e-110
Identity = 234/298 (78.52%), Postives = 253/298 (84.90%), Query Frame = 0


Query: 1   MRPVKREPAATISRSNDQSSGASAGAAGAASLRDVKRER-VARERENSGEENAAEEEEEE 60
           MRPVKREPAA+ SRSN    GA   A  AASLRDVKRE+ V+RERE SG +N    EEEE
Sbjct: 1   MRPVKREPAAS-SRSNRSRGGAV--AFDAASLRDVKREKVVSREREKSGVDNTT--EEEE 60

Query: 61  GQQEDLSKRRFLRSRYLAVIHEIGERREDLSKDSDKFDVIFKEVEKLHEQVQNPREQIAD 120
           GQQE LSKRR LRSRYLAVIHEI ERREDLSKD DKF+VI  EVEKLHEQVQ PREQ+AD
Sbjct: 61  GQQE-LSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVAD 120

Query: 121 AEALHDIANSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGL 180
           AEAL DIA+SL+T I+SQSN+GVTPS+FVSCLLREFA   G ITSEEND+VS+SWKDIGL
Sbjct: 121 AEALQDIASSLVTSIRSQSNEGVTPSNFVSCLLREFADINGNITSEENDLVSVSWKDIGL 180

Query: 181 SVSSIFKNGHGCCTMLGPMSTQLKQRK-TNISRKRSKLPESSKPAQVDGNGSEEKTDTDK 240
            VSSIF NGHGC TMLGPMS QLKQRK TNISRKRS+  ES +PA+V  NGSEEKTDTDK
Sbjct: 181 GVSSIFMNGHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPAEVGDNGSEEKTDTDK 240

Query: 241 NMRIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHFV 297
           NM IMFGILRRNK VKLEHL+LNRKSFAQTVENLFALSFL KDGRA IT+DK+G HFV
Sbjct: 241 NMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDKNGSHFV 292

[Close]

BLAST of Sed0018661 vs. TAIR 10
Match: AT1G51130.1 (Nse4, component of Smc5/6 DNA repair complex )

HSP 1 Score: 257.3 bits (656), Expect = 1.5e-68
Identity = 153/288 (53.12%), Postives = 197/288 (68.40%), Query Frame = 0


Query: 11  TISRSNDQSSGASAGAAGAASLRDVKRERVARERENS--GEENAAEEEEEEGQQEDLSKR 70
           T+ R ++ + G          LR VK+E+  +   +S   +E    +EEE+G    +S R
Sbjct: 4   TVKRESEATGGKREADDEPEKLRSVKKEKQRKTEADSVRPDEPPPPQEEEQG----ISDR 63

Query: 71  RFLRSRYLAVIHEIGERREDLSK-DSDKFDVIFKEVEKLHEQVQNPREQIADAEALHDIA 130
           R LRS+YL++ +EI + ++DL K DSDKF  I   VE LH+QV+ PREQIADAEAL DIA
Sbjct: 64  RILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIA 123

Query: 131 NSLMTCIKSQSNDGVTPSDFVSCLLREFAIEGGGITSEENDMVSISWKDIGLSVSSIFKN 190
           N+LM+ +KSQS  GV+P++FV+ L+  F     GI ++E   VS+ WKD+G +V S    
Sbjct: 124 NTLMSSVKSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGFAVCSTVLV 183

Query: 191 GHGCCTMLGPMSTQLKQRKTNISRKRSKLPESSKPAQVDGNGSEEKTDTDKNMRIMFGIL 250
             GC TMLGPM T+LKQRK   +RKR+K  E  +P +VD + SEEKTDTDKNM IMF IL
Sbjct: 184 SCGCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNIL 243

Query: 251 RRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDKDGYHF 296
            + K V+LE+LVLNR+SFAQTVENLFALSFLAKDGR EI VDK G HF
Sbjct: 244 GKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHF 287

[Close]

BLAST of Sed0018661 vs. TAIR 10
Match: AT3G20760.1 (Nse4, component of Smc5/6 DNA repair complex )

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-64
Identity = 132/246 (53.66%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 54  EEEEEEGQQEDLSKRRFLRSRYLAVIHEIGERREDLSK-DSDKFDVIFKEVEKLHEQVQN 113
           +EEEE+G    ++ RR +RS+YLA+ H+I + ++DL+K DS+KF+ I  EVE LH++V+ 
Sbjct: 52  QEEEEQG----IADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRK 111

Query: 114 PREQIADAEALHDIANSLMTCIKSQS-NDGVTPSDFVSCLLREFAIEGGGITSEENDMVS 173
           PREQIADAEAL D+ NS+++ +KSQS + GV+P++FV+ L+  F      I ++EN  VS
Sbjct: 112 PREQIADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVS 171

Query: 174 ISWKDIGLSVSSIFKNGHGCCTMLGPMSTQLKQRKTNI-SRKRSKLPESSKPAQVDGNGS 233
           + WKD+G +V S      GC TM+GPM +++KQRK+ + +RKR+K     KP +VD   +
Sbjct: 172 MKWKDLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEA 231

Query: 234 EEKTDTDKNMRIMFGILRRNKAVKLEHLVLNRKSFAQTVENLFALSFLAKDGRAEITVDK 293
           E+K+DTD NM +MF ILR+NK VK+E+LVLNRKSFAQT EN+FALSFL KDGR EITVD 
Sbjct: 232 EKKSDTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDN 291

Query: 294 DGYHFV 297
           +G HFV
Sbjct: 292 NGSHFV 293

The following BLAST results are available for this feature:

BLAST of Sed0018661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022067.1	1.0e-114	78.38	Non-structural maintenance of chromosomes element 4-like A [Cucurbita argyrosper...	[more]
KAG6588168.1	1.7e-114	78.38	Non-structural maintenance of chromosomes element 4-like A, partial [Cucurbita a...	[more]
XP_022967561.1	1.9e-113	78.38	non-structural maintenance of chromosomes element 4 homolog A [Cucurbita maxima]	[more]
XP_022933648.1	2.7e-112	77.70	non-structural maintenance of chromosomes element 4 homolog A-like isoform X2 [C...	[more]
XP_022933647.1	2.7e-112	77.70	non-structural maintenance of chromosomes element 4 homolog A-like isoform X1 [C...	[more]

BLAST of Sed0018661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C689	2.1e-67	53.13	Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis tha...	[more]
F4JET1	1.9e-63	53.66	Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis tha...	[more]
Q2TBI1	1.2e-09	26.97	Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus OX=9...	[more]
Q9NXX6	1.0e-08	26.23	Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens OX...	[more]
Q6BDR8	3.8e-08	24.57	Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe ...	[more]

BLAST of Sed0018661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSJ2	9.1e-114	78.38	Non-structural maintenance of chromosomes element 4 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1F5E6	1.3e-112	77.70	Non-structural maintenance of chromosomes element 4 OS=Cucurbita moschata OX=366...	[more]
A0A6J1F0F0	1.3e-112	77.70	Non-structural maintenance of chromosomes element 4 OS=Cucurbita moschata OX=366...	[more]
A0A1S3BQS4	1.6e-110	75.08	Non-structural maintenance of chromosomes element 4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1HBJ2	4.7e-110	78.52	Non-structural maintenance of chromosomes element 4 OS=Cucurbita moschata OX=366...	[more]

BLAST of Sed0018661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51130.1	1.5e-68	53.13	Nse4, component of Smc5/6 DNA repair complex	[more]
AT3G20760.1	1.3e-64	53.66	Nse4, component of Smc5/6 DNA repair complex	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
IPR014854	Non-structural maintenance of chromosome element 4, C-terminal	PFAM	PF08743	Nse4_C	coord: 253..293 e-value: 4.9E-14 score: 52.4
IPR027786	Nse4/EID family	PANTHER	PTHR16140	UNCHARACTERIZED	coord: 27..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018661.1	Sed0018661.1	mRNA
Sed0018661.2	Sed0018661.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex