Sed0018642 (gene) Chayote v1

Overview


Name	Sed0018642
Type	gene
Organism	Sechium edule (Chayote v1)
Description	calmodulin-like protein 1
Location	LG10: 36877534 .. 36878857 (+)
RNA-Seq Expression	Sed0018642
Synteny	Sed0018642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACAACCACAAGTTTTCAACCAATCAAAACCCATTCTCCCAACCTTCTTTTTTCACTATTTAAACCCTTCAAATTCATCTGCCTACATATTAAACTTCAAAACCAACCCTCCCTATTTCCACAACAAAAAACAGGAGCAACCCAATTAAGTCAAAAATGCCCATAAACCCGAATTTTCTAGACCTACAATACAACATCTCAAAGAAAAAGTTCCTTCGAGAGCCCTCTCGGCTGTTCTCATTCAAGGACCGACAGAGCTCGGGGCTACGACGGGCATTGCAGCCGAGCGAGGAGGAGATAAAGTGGATCTTCAACAAGTTCGACAGGAACCGAGATGGGAGGATCTCGAAGCATGAATACAGGGGAATTTTGAAGGCATTGGGGCGAGAGAACTTGATGGAAGAGGTGCATAAGATATTCAGGGCAGTGGACGGGGACGGAGACGGGTATATAAACTTACATGAGTTCATGGAGGCTCACCGGAGCAGTGGGGGAGTTGAGATGAGGGAGGTGGAGTTTGCTTTCAAAACGTTTGATTTGAATGGGGATAGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAGGAGATTGGGGGAGAAGTGTAGCATTGAGGACTGCCGCCAGATGGTGAGGGCAGTCGACCGCGACGGCGACGACATGGTCGACATTCATGAGTTTATGAACATGATGACTCATTCTGCCAAGTAACGTTTTTAAAAGGGATGTGTGTTTTGAACTTTGAAGCCTCTTTCTTTAATGGAAGTGTAAATTTGAAGCGTTGTGTTATTTTACAATTACTTGCAACAATGGTTCGATGAAAGACTAATACAATAGTCAATATAGATGATAAAAAAAAGTATCATACCAATTGTTAGTAAGTAACTATTTGTAAGTGGGTAGTCATTGTCTCAATCATTACTCCTCAACATAAATCAACAGCTATAAGTATGAAGTAAGCCCAGTTCAATTGCTCATTAGCATGTACTTGGACCAAAAGATCAAATTTGAACTTTGAAGTACAAATACAATCTCTACTCTTACATATTATTGATCTAACAATTATTTAGGGCGATTGGATTTGGGAGCTATGAAAAGAGAAGAGATGAAATGGAAGAGAAAGAGAAAGTAGAGACCGAATGGATCAGTGACGCAATTGTTTCATTGTTTGGTTGTGAACTAGTTCAACACTAGCGTCACAGGTTCGATCCCGAGAATCGGTATTTGTTCCCCTCCTCCAATATGTACTAAAAAAAAGAAAAAAGAGAAAGTAGACTGATTTGGAAGGATGAAATATTAATTTGGAAATTAGTGGTTTGGAG

mRNA sequence

CAAACAACCACAAGTTTTCAACCAATCAAAACCCATTCTCCCAACCTTCTTTTTTCACTATTTAAACCCTTCAAATTCATCTGCCTACATATTAAACTTCAAAACCAACCCTCCCTATTTCCACAACAAAAAACAGGAGCAACCCAATTAAGTCAAAAATGCCCATAAACCCGAATTTTCTAGACCTACAATACAACATCTCAAAGAAAAAGTTCCTTCGAGAGCCCTCTCGGCTGTTCTCATTCAAGGACCGACAGAGCTCGGGGCTACGACGGGCATTGCAGCCGAGCGAGGAGGAGATAAAGTGGATCTTCAACAAGTTCGACAGGAACCGAGATGGGAGGATCTCGAAGCATGAATACAGGGGAATTTTGAAGGCATTGGGGCGAGAGAACTTGATGGAAGAGGTGCATAAGATATTCAGGGCAGTGGACGGGGACGGAGACGGGTATATAAACTTACATGAGTTCATGGAGGCTCACCGGAGCAGTGGGGGAGTTGAGATGAGGGAGGTGGAGTTTGCTTTCAAAACGTTTGATTTGAATGGGGATAGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAGGAGATTGGGGGAGAAGTGTAGCATTGAGGACTGCCGCCAGATGGTGAGGGCAGTCGACCGCGACGGCGACGACATGGTCGACATTCATGAGTTTATGAACATGATGACTCATTCTGCCAAGTAACGTTTTTAAAAGGGATGTGTGTTTTGAACTTTGAAGCCTCTTTCTTTAATGGAAGTGTAAATTTGAAGCGTTGTGTTATTTTACAATTACTTGCAACAATGGTTCGATGAAAGACTAATACAATAGTCAATATAGATGATAAAAAAAAGTATCATACCAATTGTTAGTAAGTAACTATTTGTAAGTGGGTAGTCATTGTCTCAATCATTACTCCTCAACATAAATCAACAGCTATAAGTATGAAGTAAGCCCAGTTCAATTGCTCATTAGCATGTACTTGGACCAAAAGATCAAATTTGAACTTTGAAGTACAAATACAATCTCTACTCTTACATATTATTGATCTAACAATTATTTAGGGCGATTGGATTTGGGAGCTATGAAAAGAGAAGAGATGAAATGGAAGAGAAAGAGAAAGTAGAGACCGAATGGATCAGTGACGCAATTGTTTCATTGTTTGGTTGTGAACTAGTTCAACACTAGCGTCACAGGTTCGATCCCGAGAATCGGTATTTGTTCCCCTCCTCCAATATGTACTAAAAAAAAGAAAAAAGAGAAAGTAGACTGATTTGGAAGGATGAAATATTAATTTGGAAATTAGTGGTTTGGAG

Coding sequence (CDS)

ATGCCCATAAACCCGAATTTTCTAGACCTACAATACAACATCTCAAAGAAAAAGTTCCTTCGAGAGCCCTCTCGGCTGTTCTCATTCAAGGACCGACAGAGCTCGGGGCTACGACGGGCATTGCAGCCGAGCGAGGAGGAGATAAAGTGGATCTTCAACAAGTTCGACAGGAACCGAGATGGGAGGATCTCGAAGCATGAATACAGGGGAATTTTGAAGGCATTGGGGCGAGAGAACTTGATGGAAGAGGTGCATAAGATATTCAGGGCAGTGGACGGGGACGGAGACGGGTATATAAACTTACATGAGTTCATGGAGGCTCACCGGAGCAGTGGGGGAGTTGAGATGAGGGAGGTGGAGTTTGCTTTCAAAACGTTTGATTTGAATGGGGATAGGAAGATTAGTGCAGAGGAAGTGATGAGAGTGTTGAGGAGATTGGGGGAGAAGTGTAGCATTGAGGACTGCCGCCAGATGGTGAGGGCAGTCGACCGCGACGGCGACGACATGGTCGACATTCATGAGTTTATGAACATGATGACTCATTCTGCCAAGTAA

Protein sequence

MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMTHSAK

Homology

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BLAST of Sed0018642 vs. NCBI nr
Match: XP_038888181.1 (calmodulin-like protein 30 [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MPINPN LDLQYN+SKKKFLREPSRLFSFKDRQSSGLRRALQPS EEIK IFNKFDRNRD
Sbjct: 1   MPINPNLLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSTEEIKQIFNKFDRNRD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISK+EYRGILKALGREN MEEV  IFRAVD DGDGYINL+EFME HRS GGV+ RE+E
Sbjct: 61  GRISKNEYRGILKALGRENSMEEVQNIFRAVDADGDGYINLNEFMEVHRSGGGVQAREIE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEEVMRVLR LGEKCSIEDCR+MVRAVD DGD MVDI+EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLRGLGEKCSIEDCRRMVRAVDNDGDGMVDINEFMTMMT 180

Query: 181 HSAK 185
            SAK
Sbjct: 181 RSAK 184

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BLAST of Sed0018642 vs. NCBI nr
Match: XP_004137114.2 (calmodulin-like protein 30 [Cucumis sativus] >KGN43936.1 hypothetical protein Csa_017094 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 9.7e-84
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MPINPNFL+LQYN+SKKKFLREPSRLFSFKDRQSSGLRRALQPS EEIK IFNKFD N+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRGILKALGR N MEEV KIFRAVD DGDGYINL+EFME HRS GGV+ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEEVMRVL+ LGEKCSIEDCR+MVRAVD DGD MVDI+EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 HSAK 185
            SAK
Sbjct: 181 RSAK 184

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BLAST of Sed0018642 vs. NCBI nr
Match: XP_008454944.1 (PREDICTED: calmodulin-like protein 1 [Cucumis melo] >KAA0031292.1 calmodulin-like protein 1 [Cucumis melo var. makuwa] >TYK06744.1 calmodulin-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.8e-83
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MPINPNFLDLQYN+SKKKFLREPSRLFSFKDRQSSGLRRALQPS EEIK IFNKFD N+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRGILKALGR + MEEV KIFRAVD DGDGYINL+EFME HRS GGV+ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEEVMRVL+ LGEKCSIEDCR+MVRAVD DGD MVDI+EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 HSAK 185
            SAK
Sbjct: 181 RSAK 184

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BLAST of Sed0018642 vs. NCBI nr
Match: XP_022988967.1 (calmodulin-like protein 1 [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 155/182 (85.16%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MP+NPN LDLQY +SKKKFLREPSRLFSFKDRQSSG+RRALQPS EEIK IFNKFD NRD
Sbjct: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRG+LKALGR N MEEV KIFRAVD DGDGYINL+EFME HRS  GV+ REVE
Sbjct: 61  GRISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQAREVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEE+MRVLR LGEKCSIEDCR+MVRAVD DGD MVDI EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180

Query: 181 HS 183
            S
Sbjct: 181 RS 182

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BLAST of Sed0018642 vs. NCBI nr
Match: KAG6588656.1 (Calmodulin-like protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013282.1 Calmodulin-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.1 bits (788), Expect = 5.0e-80
Identity = 154/182 (84.62%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MP+NPN LDLQY +SKKKFLREPSRLFSFKDRQSSG+RRALQPS EEIK IFNKFD NRD
Sbjct: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRG+LKALGR N MEEV KIFRAVD DGDGYINL+EFME HRS  GV+ R+VE
Sbjct: 61  GRISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEE+MRVLR LGEKCSIEDCR+MVRAVD DGD MVDI EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180

Query: 181 HS 183
            S
Sbjct: 181 RS 182

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BLAST of Sed0018642 vs. ExPASy Swiss-Prot
Match: Q9ZQE6 (Calmodulin-like protein 30 OS=Arabidopsis thaliana OX=3702 GN=CML30 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.3e-50
Identity = 100/182 (54.95%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 4   NPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRA-----LQPSEEEIKWIFNKFDRN 63
           N +FL+LQY +SK K LR+PSR+FS +DRQSSGL         QPS  E++ +F++FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMRE 123
           +DG+IS+ EY+ +L+ALG+E  +E+V KIF+AVD DGDG+I+  EF++A++ SGG+   +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNM 181
           +  +F TFDLNGD KISAEEVM VL +LGE+CS+EDC +MVRAVD DGD +V++ EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]

BLAST of Sed0018642 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25
Identity = 61/142 (42.96%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 47  EIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFME 106
           E++ +F KFD N DG+IS  E   I+ +LG E   EE+ K    +D  GDGYIN  EF+E
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 107 AHRSSGGVEMREV----EFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAV 166
              ++ G++  +V    + AF  +D++G+  ISAEE+  VLR LG++CSI +CR+M+  V
Sbjct: 97  L--NTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGV 156

Query: 167 DRDGDDMVDIHEFMNMMTHSAK 185
           D+DGD  +D  EF  MMT  ++
Sbjct: 157 DKDGDGTIDFEEFKIMMTMGSR 176

[Close]

BLAST of Sed0018642 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 46  EEIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFM 105
           EE+K +F++FD N DG+IS  E  G+ KA+G      E++++   VD D DGYINL EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EAHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRD 165
              RSS      E+  AF  +D + +  ISA E+ +VL RLG  CS+EDC +M+  VD D
Sbjct: 82  TLCRSSSSA--AEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 141

Query: 166 GDDMVDIHEFMNMMTHSA 184
           GD  V+  EF  MMT S+
Sbjct: 142 GDGNVNFEEFQKMMTSSS 157

[Close]

BLAST of Sed0018642 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24
Identity = 60/150 (40.00%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 34  SSGLRRALQPSEEEIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDG 93
           S  + R    S E+IK +F +FD+N DG+IS  E + ++ AL      EE   + +  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYINLHEFME----AHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEK 153
           DG+G+I+L EF+     + +SS    +R+++ AF  +DL+ + +ISA E+  V++ LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRQMVRAVDRDGDDMVDIHEFMNMM 180
           CSI+DC++M+  VD DGD  VD  EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

[Close]

BLAST of Sed0018642 vs. ExPASy Swiss-Prot
Match: Q9M7R0 (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.6e-23
Identity = 58/144 (40.28%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 47  EIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEF-- 106
           E++ +FN+FD N DG+IS  E  G+LKALG     EE+ +I   +D D DG+IN+ EF  
Sbjct: 20  EVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAA 79

Query: 107 -----MEAHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMV 166
                 + + SSGG    E++ AF+ +D + +  IS+ E+ ++L RLGE+ +  DC +M+
Sbjct: 80  FVKAETDPYPSSGG--ENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMI 139

Query: 167 RAVDRDGDDMVDIHEFMNMMTHSA 184
           ++VD DGD  V   EF  MMT+ +
Sbjct: 140 KSVDSDGDGYVSFEEFKKMMTNKS 161

[Close]

BLAST of Sed0018642 vs. ExPASy TrEMBL
Match: A0A0A0K804 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073720 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.7e-84
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MPINPNFL+LQYN+SKKKFLREPSRLFSFKDRQSSGLRRALQPS EEIK IFNKFD N+D
Sbjct: 1   MPINPNFLELQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSSEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRGILKALGR N MEEV KIFRAVD DGDGYINL+EFME HRS GGV+ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGNSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEEVMRVL+ LGEKCSIEDCR+MVRAVD DGD MVDI+EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 HSAK 185
            SAK
Sbjct: 181 RSAK 184

[Close]

BLAST of Sed0018642 vs. ExPASy TrEMBL
Match: A0A5D3C643 (Calmodulin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00450 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MPINPNFLDLQYN+SKKKFLREPSRLFSFKDRQSSGLRRALQPS EEIK IFNKFD N+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRGILKALGR + MEEV KIFRAVD DGDGYINL+EFME HRS GGV+ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEEVMRVL+ LGEKCSIEDCR+MVRAVD DGD MVDI+EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 HSAK 185
            SAK
Sbjct: 181 RSAK 184

[Close]

BLAST of Sed0018642 vs. ExPASy TrEMBL
Match: A0A1S3C0X9 (calmodulin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495233 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MPINPNFLDLQYN+SKKKFLREPSRLFSFKDRQSSGLRRALQPS EEIK IFNKFD N+D
Sbjct: 1   MPINPNFLDLQYNVSKKKFLREPSRLFSFKDRQSSGLRRALQPSLEEIKQIFNKFDTNKD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRGILKALGR + MEEV KIFRAVD DGDGYINL+EFME HRS GGV+ +EVE
Sbjct: 61  GRISKHEYRGILKALGRGSSMEEVQKIFRAVDSDGDGYINLNEFMEVHRSGGGVQAKEVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEEVMRVL+ LGEKCSIEDCR+MVRAVD DGD MVDI+EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEVMRVLKGLGEKCSIEDCRRMVRAVDSDGDGMVDINEFMTMMT 180

Query: 181 HSAK 185
            SAK
Sbjct: 181 RSAK 184

[Close]

BLAST of Sed0018642 vs. ExPASy TrEMBL
Match: A0A6J1JEH1 (calmodulin-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111486169 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 155/182 (85.16%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MP+NPN LDLQY +SKKKFLREPSRLFSFKDRQSSG+RRALQPS EEIK IFNKFD NRD
Sbjct: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           GRISKHEYRG+LKALGR N MEEV KIFRAVD DGDGYINL+EFME HRS  GV+ REVE
Sbjct: 61  GRISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQAREVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEE+MRVLR LGEKCSIEDCR+MVRAVD DGD MVDI EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180

Query: 181 HS 183
            S
Sbjct: 181 RS 182

[Close]

BLAST of Sed0018642 vs. ExPASy TrEMBL
Match: A0A6J1ELL0 (calmodulin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434472 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.6e-79
Identity = 153/182 (84.07%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MPINPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRALQPSEEEIKWIFNKFDRNRD 60
           MP+NPN LDLQY +SKKKFLREPSRLFSFKDRQSSG+RRALQPS EEIK IFNKFD NRD
Sbjct: 1   MPMNPNLLDLQYRVSKKKFLREPSRLFSFKDRQSSGVRRALQPSTEEIKQIFNKFDTNRD 60

Query: 61  GRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMREVE 120
           G ISKHEYRG+LKALGR N MEEV KIFRAVD DGDGYINL+EFME HRS  GV+ R+VE
Sbjct: 61  GLISKHEYRGVLKALGRGNSMEEVQKIFRAVDTDGDGYINLNEFMEVHRSGDGVQARDVE 120

Query: 121 FAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNMMT 180
           FAFKTFDLNGDRKISAEE+MRVLR LGEKCSIEDCR+MVRAVD DGD MVDI EFM MMT
Sbjct: 121 FAFKTFDLNGDRKISAEEIMRVLRGLGEKCSIEDCRRMVRAVDSDGDGMVDIDEFMTMMT 180

Query: 181 HS 183
            S
Sbjct: 181 RS 182

[Close]

BLAST of Sed0018642 vs. TAIR 10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-51
Identity = 100/182 (54.95%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 4   NPNFLDLQYNISKKKFLREPSRLFSFKDRQSSGLRRA-----LQPSEEEIKWIFNKFDRN 63
           N +FL+LQY +SK K LR+PSR+FS +DRQSSGL         QPS  E++ +F++FD +
Sbjct: 3   NVSFLELQYKLSKNKMLRKPSRMFS-RDRQSSGLSSPGPGGFSQPSVNEMRRVFSRFDLD 62

Query: 64  RDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFMEAHRSSGGVEMRE 123
           +DG+IS+ EY+ +L+ALG+E  +E+V KIF+AVD DGDG+I+  EF++A++ SGG+   +
Sbjct: 63  KDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSD 122

Query: 124 VEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRDGDDMVDIHEFMNM 181
           +  +F TFDLNGD KISAEEVM VL +LGE+CS+EDC +MVRAVD DGD +V++ EF+ M
Sbjct: 123 IRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKM 182

[Close]

BLAST of Sed0018642 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26
Identity = 61/142 (42.96%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 47  EIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFME 106
           E++ +F KFD N DG+IS  E   I+ +LG E   EE+ K    +D  GDGYIN  EF+E
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 107 AHRSSGGVEMREV----EFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAV 166
              ++ G++  +V    + AF  +D++G+  ISAEE+  VLR LG++CSI +CR+M+  V
Sbjct: 97  L--NTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGV 156

Query: 167 DRDGDDMVDIHEFMNMMTHSAK 185
           D+DGD  +D  EF  MMT  ++
Sbjct: 157 DKDGDGTIDFEEFKIMMTMGSR 176

[Close]

BLAST of Sed0018642 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 114.4 bits (285), Expect = 9.8e-26
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 46  EEIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFM 105
           EE+K +F++FD N DG+IS  E  G+ KA+G      E++++   VD D DGYINL EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EAHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRD 165
              RSS      E+  AF  +D + +  ISA E+ +VL RLG  CS+EDC +M+  VD D
Sbjct: 82  TLCRSSSSA--AEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 141

Query: 166 GDDMVDIHEFMNMMTHSA 184
           GD  V+  EF  MMT S+
Sbjct: 142 GDGNVNFEEFQKMMTSSS 157

[Close]

BLAST of Sed0018642 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 114.4 bits (285), Expect = 9.8e-26
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 46  EEIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDGDGDGYINLHEFM 105
           EE+K +F++FD N DG+IS  E  G+ KA+G      E++++   VD D DGYINL EF 
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 106 EAHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEKCSIEDCRQMVRAVDRD 165
              RSS      E+  AF  +D + +  ISA E+ +VL RLG  CS+EDC +M+  VD D
Sbjct: 82  TLCRSSSSA--AEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMIGPVDAD 141

Query: 166 GDDMVDIHEFMNMMTHSA 184
           GD  V+  EF  MMT S+
Sbjct: 142 GDGNVNFEEFQKMMTSSS 157

[Close]

BLAST of Sed0018642 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-25
Identity = 60/150 (40.00%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 34  SSGLRRALQPSEEEIKWIFNKFDRNRDGRISKHEYRGILKALGRENLMEEVHKIFRAVDG 93
           S  + R    S E+IK +F +FD+N DG+IS  E + ++ AL      EE   + +  D 
Sbjct: 2   SKNVSRNCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDL 61

Query: 94  DGDGYINLHEFME----AHRSSGGVEMREVEFAFKTFDLNGDRKISAEEVMRVLRRLGEK 153
           DG+G+I+L EF+     + +SS    +R+++ AF  +DL+ + +ISA E+  V++ LGEK
Sbjct: 62  DGNGFIDLDEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEK 121

Query: 154 CSIEDCRQMVRAVDRDGDDMVDIHEFMNMM 180
           CSI+DC++M+  VD DGD  VD  EF  MM
Sbjct: 122 CSIQDCQRMINKVDSDGDGCVDFEEFKKMM 151

The following BLAST results are available for this feature:

BLAST of Sed0018642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888181.1	1.5e-84	88.04	calmodulin-like protein 30 [Benincasa hispida]	[more]
XP_004137114.2	9.7e-84	86.96	calmodulin-like protein 30 [Cucumis sativus] >KGN43936.1 hypothetical protein Cs...	[more]
XP_008454944.1	2.8e-83	86.96	PREDICTED: calmodulin-like protein 1 [Cucumis melo] >KAA0031292.1 calmodulin-lik...	[more]
XP_022988967.1	2.2e-80	85.16	calmodulin-like protein 1 [Cucurbita maxima]	[more]
KAG6588656.1	5.0e-80	84.62	Calmodulin-like protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of Sed0018642 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQE6	4.3e-50	54.95	Calmodulin-like protein 30 OS=Arabidopsis thaliana OX=3702 GN=CML30 PE=2 SV=1	[more]
Q9FYK2	3.6e-25	42.96	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ...	[more]
Q9LE22	1.4e-24	44.93	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ...	[more]
Q9C8Y1	3.1e-24	40.00	Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ...	[more]
Q9M7R0	7.6e-23	40.28	Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of Sed0018642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K804	4.7e-84	86.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073720 PE=4 SV=1	[more]
A0A5D3C643	1.4e-83	86.96	Calmodulin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C0X9	1.4e-83	86.96	calmodulin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495233 PE=4 SV=1	[more]
A0A6J1JEH1	1.1e-80	85.16	calmodulin-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111486169 PE=4 SV=1	[more]
A0A6J1ELL0	1.6e-79	84.07	calmodulin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434472 PE=4 SV=...	[more]

BLAST of Sed0018642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15680.1	3.0e-51	54.95	Calcium-binding EF-hand family protein	[more]
AT1G24620.1	2.6e-26	42.96	EF hand calcium-binding protein family	[more]
AT1G18210.1	9.8e-26	44.93	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	9.8e-26	44.93	Calcium-binding EF-hand family protein	[more]
AT1G66400.1	2.2e-25	40.00	calmodulin like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 154..182 e-value: 0.51 score: 19.4 coord: 83..111 e-value: 2.0E-4 score: 30.7 coord: 47..75 e-value: 4.8E-7 score: 39.4 coord: 118..146 e-value: 1.9E-4 score: 30.7
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 82..139 e-value: 7.0E-13 score: 48.8
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 47..75 e-value: 1.3E-7 score: 30.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 114..149 score: 14.150764
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 150..184 score: 10.217514
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 79..113 score: 11.444912
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 43..78 score: 16.298712
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 118..180 e-value: 7.60115E-16 score: 66.4173
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 47..109 e-value: 1.35107E-17 score: 71.0397
None	No IPR available	GENE3D	1.10.238.10		coord: 115..184 e-value: 6.0E-20 score: 73.0
None	No IPR available	GENE3D	1.10.238.10		coord: 7..114 e-value: 5.3E-22 score: 80.6
None	No IPR available	PANTHER	PTHR10891:SF685	CALCIUM-BINDING PROTEIN CML34-RELATED	coord: 6..183
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 6..183
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 127..139
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 56..68
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 163..175
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 44..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018642.1	Sed0018642.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005509	calcium ion binding