Homology
BLAST of Sed0018552 vs. NCBI nr
Match:
KAG7023735.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 902.5 bits (2331), Expect = 1.8e-258
Identity = 454/547 (83.00%), Postives = 491/547 (89.76%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNKPTIF------TSILSNCCDPRHIYQIHGFMLQTALDQDNLLLG 60
MR S LC SS S + TIF TS+LSNC DPRHIYQIHGFML ALDQDNLLL
Sbjct: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRP 120
RFI ACSSLGL YA+SVFSNK HPDLRL N A+KALSQ SSP++AISLYS I IEGLRP
Sbjct: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLF 180
DSY+IPFVLKAVV+L+A+ VGRQIH Q VSS LD DVNVATS IQMYSSCG VSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVA 240
D V F+DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFR MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLA 360
KSGNI RALEVF+NMKHKSVITWSTMIA +ALHG GG+AIDMF +ME+ARVRPNEVTF+A
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQKL QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHR+A+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQ 540
KVMRNAGVKKAPGGSFIEINN V+EFLAGD+SDS+LH IYPVLC ++ QL M GS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLDYD 542
SKFL+YD
Sbjct: 541 SKFLNYD 547
BLAST of Sed0018552 vs. NCBI nr
Match:
XP_022987264.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima])
HSP 1 Score: 902.5 bits (2331), Expect = 1.8e-258
Identity = 454/547 (83.00%), Postives = 490/547 (89.58%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNKPTIF------TSILSNCCDPRHIYQIHGFMLQTALDQDNLLLG 60
MR SL LC SS SF + TIF TS+LSNC D RHIYQIHGFML ALDQDNLLL
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRP 120
RFI ACSSLGL YA+SVFSNK HPDLRL N A+KALSQ SSP++AISLYS I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLF 180
DSY+IPFVLKAVV+L+ + VGRQIH Q VSS LD DVNV TS IQMYSSCG VSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVA 240
D V ++DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFR MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLA 360
KSGNI RALEVF+NMKHKSVITWSTMIA +ALHG GG+AIDMF +ME+ARVRPNEVTF+A
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQKL QDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHR+A+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQ 540
KVMRNAGVKKAPGGSFIEINN VYEFLAGD+SDS+LH IYPVLC ++ QL M GS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540
Query: 541 SKFLDYD 542
SKFL+YD
Sbjct: 541 SKFLNYD 547
BLAST of Sed0018552 vs. NCBI nr
Match:
XP_023515616.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 899.4 bits (2323), Expect = 1.5e-257
Identity = 453/547 (82.82%), Postives = 491/547 (89.76%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNKPTIF------TSILSNCCDPRHIYQIHGFMLQTALDQDNLLLG 60
MR SL LC SS SF + TIF TS+LSNC D RHIYQIHGFML ALDQDNLLL
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRP 120
RFI ACSSLGL YA+SVFSNK HPDLRL N A+KALSQ SSP++AISLYS I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLF 180
DSY+IPFVLKAVV+L+A+ VGRQIH Q VSS LD DVNVATS IQMYS CG VSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSFCGCVSDARKLF 180
Query: 181 DFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVA 240
D V F+DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFR MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLA 360
KSGNI RALEVF+NMKHKSVITWSTMIA +ALHG GG+AIDMF +ME+ARVRPNEVTF+A
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQ+L QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQELFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHR+AELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQ 540
KVMRNAGVKKAPGGSFIEINN V+EFLAGD+S+S+LH IYPVLC ++ QL M GS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLDYD 542
SKFL+YD
Sbjct: 541 SKFLNYD 547
BLAST of Sed0018552 vs. NCBI nr
Match:
XP_022960640.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata])
HSP 1 Score: 897.9 bits (2319), Expect = 4.3e-257
Identity = 450/544 (82.72%), Postives = 489/544 (89.89%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNK---PTIFTSILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFI 60
MR SL LC SS SF + P+ TS+LSNC DPRHIYQIHGFML ALDQDNLLL RFI
Sbjct: 1 MRWSLFRLCKSSSSFVESFAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFI 60
Query: 61 GACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSY 120
ACSSLGL YA SVFSNK HPDLRL N A+KALSQ SSP++AISLYS I IEGLRPDSY
Sbjct: 61 DACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSY 120
Query: 121 SIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFV 180
+IPFVLKA+V+L+A+ VGRQIH Q VSS LD DVNV TS IQMYSSCG VSDARKLFD V
Sbjct: 121 TIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLFDLV 180
Query: 181 AFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFR 240
F+DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+ LFR
Sbjct: 181 DFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFR 240
Query: 241 MMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG 300
MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYAKSG
Sbjct: 241 KMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSG 300
Query: 301 NIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLAILS 360
NI RALEVF+NMKHK+VITWSTMIA +ALHG GG+A DMF +ME+ARVRPNEVTF+AILS
Sbjct: 301 NIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIAILS 360
Query: 361 ACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFEANA 420
ACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQKL QDMP+EANA
Sbjct: 361 ACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANA 420
Query: 421 AIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 480
AIWGSLLAASNTHR+A+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM
Sbjct: 421 AIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 480
Query: 481 RNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQSKF 540
RNAGVKKAPGGSFIEINN V+EFLAGD+SDS+LH IYPVLC ++ QL M GS EE SKF
Sbjct: 481 RNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEWSKF 540
Query: 541 LDYD 542
L+YD
Sbjct: 541 LNYD 544
BLAST of Sed0018552 vs. NCBI nr
Match:
KAG6590068.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 891.0 bits (2301), Expect = 5.3e-255
Identity = 448/547 (81.90%), Postives = 489/547 (89.40%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNKPTIF------TSILSNCCDPRHIYQIHGFMLQTALDQDNLLLG 60
MR SL L SS S + TIF TS+LSNC DPRHIYQIHGFML ALDQDNLLL
Sbjct: 1 MRWSLSSLYKSSSSLVESTIFAATFSLTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRP 120
RFI ACSSLGL YA+SVFSNK HPDLRL N A+KALSQ SSP++A+SLYS I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINALSLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLF 180
DSY+IP VLKAVV+L+A+ VGRQIH Q VSS LD DVNVATS IQMYSSCG VSDARKLF
Sbjct: 121 DSYTIPSVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVA 240
D V F+DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFR MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLA 360
KSGNI RALEVF+NMKHK+VITWSTMIA +ALHG GG+A DMF +ME+ARVRPNEVTF+A
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQKL QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHR+A+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQ 540
KVMRNAGVKKAPGGSFIEINN V+EFLAGD+S+S++H IYPVLC ++ QL M GS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQIHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLDYD 542
SKFL+YD
Sbjct: 541 SKFLNYD 547
BLAST of Sed0018552 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 520.0 bits (1338), Expect = 3.2e-146
Identity = 260/494 (52.63%), Postives = 356/494 (72.06%), Query Frame = 0
Query: 36 QIHGFMLQTALDQDNLLLGRFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQAS 95
Q H +M+ T L++DNL + +FI ACS+ G YAYSVF+++P P+ L N I+ALS
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLD 92
Query: 96 SPVS---AISLYSTIRIEGLRPDSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVN 155
P + AI++Y + +PD+++ PFVLK V+++ + GRQIH Q V D V+
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 156 VATSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMP--Q 215
V T IQMY SCG + DARK+FD + +DV +WNA++AGY K E+ AR + + MP
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 216 RNVISWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWI 275
RN +SWT +I+GYA++ R +A+ +F+ M +E VEPDE+ +LAVLSACADLG+LELGE I
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 276 HNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHG 335
+Y++ G+ R V L NA+IDMYAKSGNI +AL+VF+ + ++V+TW+T+IAGLA HGHG
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 336 GEAIDMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGC 395
EA+ MF +M +A VRPN+VTF+AILSACSHVG VD+G+ F+ M S Y I P IEHYGC
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 396 MIDLLARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPEN 455
MIDLL RAG L++A ++++ MPF+ANAAIWGSLLAASN H + EL E+AL L KLEP N
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 456 SGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKL 515
SGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ N VY+F++GD + ++
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQV 512
Query: 516 HEIYPVLCKMVAQL 525
I+ +L +M Q+
Sbjct: 513 ERIHEILQEMDLQI 526
BLAST of Sed0018552 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 399.4 bits (1025), Expect = 6.4e-110
Identity = 198/483 (40.99%), Postives = 305/483 (63.15%), Query Frame = 0
Query: 36 QIHGFMLQTALDQDNLLLGRFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQAS 95
+I+ ++ L Q + ++ + + C + YA +F+ +P++ L N+ I+A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 96 SPVSAISLYSTIRIEGLR-PDSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVA 155
I +Y + + PD ++ PF+ K+ L + +G+Q+H V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 156 TSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVI 215
+ I MY + DA K+FD + RDV WN++++GY + ++ A+ +F M + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 216 SWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYI 275
SWTA+I+GY +A+ FR MQ+ +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 276 EKHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAI 335
E+ G + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+G A HG+ AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 336 DMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDL 395
+ F +M+RA+V+PN +TFL +LSACSHVGM G YFD M Y+I+PKIEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 396 LARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNY 455
LARAG L++A ++ + MP + ++ IWGSLL++ T N ++A A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 456 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIY 515
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S EI
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEIS 507
Query: 516 PVL 518
VL
Sbjct: 508 IVL 510
BLAST of Sed0018552 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 390.6 bits (1002), Expect = 3.0e-107
Identity = 207/520 (39.81%), Postives = 298/520 (57.31%), Query Frame = 0
Query: 23 SILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFIGACSSLGLSS---YAYSVFSNKPHP 82
S L C + QIH ML+T L QD+ + +F+ C S S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 83 DLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSYSIPFVLKAVVKLAAIRVGRQIH 142
D L N I+ S + P ++ LY + ++Y+ P +LKA L+A QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 143 AQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELS 202
AQ + DV S I Y+ G A LFD + D WN+++ GYVKA ++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 203 NARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDEIAMLAVLSACA 262
A +F +M ++N ISWT +I+GY Q + ++A+ LF MQ VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 263 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWST 322
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 323 MIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVY 382
+I+G A HGHG EAI F +M++ ++PN +TF A+L+ACS+ G+V+ G+ F ME Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 383 KIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQA 442
+KP IEHYGC++DLL RAG L +A++ +Q+MP + NA IWG+LL A H+N EL E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 443 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYE 502
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + T +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 503 FLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQSKFLD 540
FLAGD+S ++ +I M +L G + E + LD
Sbjct: 499 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLD 538
BLAST of Sed0018552 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 5.6e-106
Identity = 222/620 (35.81%), Postives = 320/620 (51.61%), Query Frame = 0
Query: 16 NKPTIFTSILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFIGAC----SSLGLSSYAYS 75
N P++ S+L NC + + IH M++ L N L + I C GL YA S
Sbjct: 33 NHPSL--SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL-PYAIS 92
Query: 76 VFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSYSIPFVLKAVVKLAA 135
VF P+L + N + + +S PVSA+ LY + GL P+SY+ PFVLK+ K A
Sbjct: 93 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 152
Query: 136 IRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAG 195
+ G+QIH + DLD+ V TS I MY G + DA K+FD RDV + A++ G
Sbjct: 153 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 212
Query: 196 YVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDE--- 255
Y + NA+K+FDE+P ++V+SW A+I+GYA+T ++A+ LF+ M V PDE
Sbjct: 213 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 272
Query: 256 ------------------------------------------------------------ 315
Sbjct: 273 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 332
Query: 316 --------------------------------------IAMLAVLSACADLGALELGEWI 375
+ ML++L ACA LGA+++G WI
Sbjct: 333 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 392
Query: 376 HNYIEKH--GLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHG 435
H YI+K G+ L +LIDMYAK G+I A +VF+++ HKS+ +W+ MI G A+HG
Sbjct: 393 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 452
Query: 436 HGGEAIDMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHY 495
+ D+F +M + ++P+++TF+ +LSACSH GM+D+GR+ F M YK+ PK+EHY
Sbjct: 453 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 512
Query: 496 GCMIDLLARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEP 529
GCMIDLL +G ++A++++ M E + IW SLL A H N EL E +L K+EP
Sbjct: 513 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 572
BLAST of Sed0018552 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 384.0 bits (985), Expect = 2.8e-105
Identity = 187/493 (37.93%), Postives = 301/493 (61.05%), Query Frame = 0
Query: 37 IHGFMLQTALDQDNLLLGRFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASS 96
+HG +++A+ D + I S G A VF+ D+ N+ I Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 97 PVSAISLYSTIRIEGLRPDSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATS 156
P A+ L+ + E ++ ++ VL A K+ + GRQ+ + + +++++ +A +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 157 FIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISW 216
+ MY+ CG + DA++LFD + +D W M+ GY + + AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 217 TALIAGYAQTNRPEDAVALFRMMQIEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 276
ALI+ Y Q +P +A+ +F +Q++K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 277 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAID 336
KHG+ + +ALI MY+K G++ ++ EVF++++ + V WS MI GLA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 337 MFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLL 396
MF +M+ A V+PN VTF + ACSH G+VD F +MES Y I P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 397 ARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYT 456
R+GYL++A K ++ MP + ++WG+LL A H N LAE A L +LEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 457 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYP 516
LLSN YA LG+W +RK MR G+KK PG S IEI+ ++EFL+GD + ++Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 517 VLCKMVAQLNMVG 529
L +++ +L G
Sbjct: 633 KLHEVMEKLKSNG 645
BLAST of Sed0018552 vs. ExPASy TrEMBL
Match:
A0A6J1JID8 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=3661 GN=LOC111484870 PE=4 SV=1)
HSP 1 Score: 902.5 bits (2331), Expect = 8.5e-259
Identity = 454/547 (83.00%), Postives = 490/547 (89.58%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNKPTIF------TSILSNCCDPRHIYQIHGFMLQTALDQDNLLLG 60
MR SL LC SS SF + TIF TS+LSNC D RHIYQIHGFML ALDQDNLLL
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRP 120
RFI ACSSLGL YA+SVFSNK HPDLRL N A+KALSQ SSP++AISLYS I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLF 180
DSY+IPFVLKAVV+L+ + VGRQIH Q VSS LD DVNV TS IQMYSSCG VSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVA 240
D V ++DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFR MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLA 360
KSGNI RALEVF+NMKHKSVITWSTMIA +ALHG GG+AIDMF +ME+ARVRPNEVTF+A
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQKL QDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHR+A+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQ 540
KVMRNAGVKKAPGGSFIEINN VYEFLAGD+SDS+LH IYPVLC ++ QL M GS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540
Query: 541 SKFLDYD 542
SKFL+YD
Sbjct: 541 SKFLNYD 547
BLAST of Sed0018552 vs. ExPASy TrEMBL
Match:
A0A6J1H9N0 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3662 GN=LOC111461370 PE=4 SV=1)
HSP 1 Score: 897.9 bits (2319), Expect = 2.1e-257
Identity = 450/544 (82.72%), Postives = 489/544 (89.89%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNK---PTIFTSILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFI 60
MR SL LC SS SF + P+ TS+LSNC DPRHIYQIHGFML ALDQDNLLL RFI
Sbjct: 1 MRWSLFRLCKSSSSFVESFAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFI 60
Query: 61 GACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSY 120
ACSSLGL YA SVFSNK HPDLRL N A+KALSQ SSP++AISLYS I IEGLRPDSY
Sbjct: 61 DACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSY 120
Query: 121 SIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFV 180
+IPFVLKA+V+L+A+ VGRQIH Q VSS LD DVNV TS IQMYSSCG VSDARKLFD V
Sbjct: 121 TIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLFDLV 180
Query: 181 AFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFR 240
F+DVALWNAMVAGYVK AEL++ARKVFD+MPQRNVISWTALIAGYAQTNRP+ A+ LFR
Sbjct: 181 DFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFR 240
Query: 241 MMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG 300
MQ+EKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYAKSG
Sbjct: 241 KMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSG 300
Query: 301 NIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLAILS 360
NI RALEVF+NMKHK+VITWSTMIA +ALHG GG+A DMF +ME+ARVRPNEVTF+AILS
Sbjct: 301 NIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIAILS 360
Query: 361 ACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFEANA 420
ACSHVGMVDVGRYYF+RM+SVYKI+P+IEHYGCMIDLLARAGYLQ+AQKL QDMP+EANA
Sbjct: 361 ACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANA 420
Query: 421 AIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 480
AIWGSLLAASNTHR+A+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM
Sbjct: 421 AIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 480
Query: 481 RNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQSKF 540
RNAGVKKAPGGSFIEINN V+EFLAGD+SDS+LH IYPVLC ++ QL M GS EE SKF
Sbjct: 481 RNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEWSKF 540
Query: 541 LDYD 542
L+YD
Sbjct: 541 LNYD 544
BLAST of Sed0018552 vs. ExPASy TrEMBL
Match:
A0A6J1D0Q9 (pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=3673 GN=LOC111016516 PE=4 SV=1)
HSP 1 Score: 887.5 bits (2292), Expect = 2.8e-254
Identity = 440/547 (80.44%), Postives = 493/547 (90.13%), Query Frame = 0
Query: 1 MRPSLRLLCTSSPSFNKPTIFT------SILSNCCDPRHIYQIHGFMLQTALDQDNLLLG 60
MR SL +LC SSP F + TIFT S+LS+CCDPRH+ QIHGFM+ ALDQDNL+L
Sbjct: 1 MRWSLSILCKSSPFFIQRTIFTAPHAFNSLLSSCCDPRHVPQIHGFMVPRALDQDNLILS 60
Query: 61 RFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRP 120
RFI ACSSL L +YAYSVFS+K +PDLRL N IKALSQ SSP+ AISL+S IR EGL+P
Sbjct: 61 RFIDACSSLRLYTYAYSVFSSKTNPDLRLYNTTIKALSQTSSPIHAISLFSRIRSEGLQP 120
Query: 121 DSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLF 180
DSYSIPFVLKAVVK++ ++VGRQIH Q V SALD DVNV TS IQMYSSCG VSDARKLF
Sbjct: 121 DSYSIPFVLKAVVKISTLQVGRQIHTQTVFSALDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVA 240
DFV +RDVALWN+MVAGYVK A+L++ARK+FDEMPQRNVI+WTALIAGYAQ NRP++A+A
Sbjct: 181 DFVPYRDVALWNSMVAGYVKVAKLNSARKLFDEMPQRNVITWTALIAGYAQNNRPDEAIA 240
Query: 241 LFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFR MQ+++VEPDEIAMLAVLSACADLGALELGEWIHNYI KHGLCRIVPLYNALIDMY+
Sbjct: 241 LFRKMQLQEVEPDEIAMLAVLSACADLGALELGEWIHNYIVKHGLCRIVPLYNALIDMYS 300
Query: 301 KSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLA 360
KSGNIRRALE+F+NMK KSVITWSTMIA LALHG GGEAID+F +ME+ARVRPNE+TF+A
Sbjct: 301 KSGNIRRALEIFENMKQKSVITWSTMIAALALHGRGGEAIDIFLRMEKARVRPNEITFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFE 420
ILSACSHVGMVD+GRYYFDRM+S YKIKP+IEHYGCMIDLLARAG+LQ+AQK+L+DMPFE
Sbjct: 361 ILSACSHVGMVDMGRYYFDRMQSTYKIKPQIEHYGCMIDLLARAGHLQEAQKVLKDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASN HR+AELAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNIHRDAELAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQ 540
KVMRNAGVKKAPGGSFIEINN VYEFLAGDKSDS+LHEI+ VLCK + QL M G L++E
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNKVYEFLAGDKSDSQLHEIFHVLCKTIVQLKMAGLLQDEW 540
Query: 541 SKFLDYD 542
SKFLD+D
Sbjct: 541 SKFLDFD 547
BLAST of Sed0018552 vs. ExPASy TrEMBL
Match:
A0A5D3CFJ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001140 PE=4 SV=1)
HSP 1 Score: 874.4 bits (2258), Expect = 2.5e-250
Identity = 437/544 (80.33%), Postives = 483/544 (88.79%), Query Frame = 0
Query: 4 SLRLLCTSSPSFNKPTI------FTSILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFI 63
S LL SS SF +P+I FTS+LSNC H+YQ+HGFML ALDQDNL L +FI
Sbjct: 4 SFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLSQFI 63
Query: 64 GACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSY 123
AC+SLGLSSYA+S+FSNK HPDLRL N AIKALS+ SSP++AI LY+ I+I+GLRPDSY
Sbjct: 64 DACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRPDSY 123
Query: 124 SIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFV 183
SIPFVLKAVVKL+A+ VGRQIHAQ VSSALD+DVNVATS IQMYSSCGFVSDARK FDFV
Sbjct: 124 SIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQFDFV 183
Query: 184 AFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFR 243
F+DVALWNAMVAGYVK EL NARKVF+EMPQRNVISWT LIAGYAQTNRP +A+ LFR
Sbjct: 184 DFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFR 243
Query: 244 MMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG 303
MQ+E+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG
Sbjct: 244 KMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG 303
Query: 304 NIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLAILS 363
NIRRALEVF+NMK KSVITWST+IA LALHG G EAIDMF +ME+ +VRPNEVTF AILS
Sbjct: 304 NIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTAILS 363
Query: 364 ACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFEANA 423
ACSHVGMVDVGRYYFD+M+S+Y+I+P+IEHYGCMIDLLARAGYLQ+A KLL DMPFEANA
Sbjct: 364 ACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFEANA 423
Query: 424 AIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 483
IWGSLLAASNTH++A LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VRK+M
Sbjct: 424 MIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVRKLM 483
Query: 484 RNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQSKF 542
RNAGVKKAPGGS IEINN VYEFLAGDKSDS +HEIY VLCK++ QL M GS +EE SKF
Sbjct: 484 RNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEWSKF 543
BLAST of Sed0018552 vs. ExPASy TrEMBL
Match:
A0A5A7UQ55 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001200 PE=4 SV=1)
HSP 1 Score: 872.5 bits (2253), Expect = 9.5e-250
Identity = 435/544 (79.96%), Postives = 481/544 (88.42%), Query Frame = 0
Query: 4 SLRLLCTSSPSFNKPTI------FTSILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFI 63
S LL SS SF +P+I FTS+LSNC H+YQ+HGFML ALDQDNL L +FI
Sbjct: 4 SFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLSQFI 63
Query: 64 GACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSY 123
AC+SLGLSSYA+S+FSNK HPDLRL N AIKALS+ SSP+ AI LY+ I+I+GLRPDSY
Sbjct: 64 DACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRPDSY 123
Query: 124 SIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFV 183
SIPFVLKAVVKL+A+ VGRQIHAQ VSSALD+DVNVATS IQMYSSCGFVSDARK FDFV
Sbjct: 124 SIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQFDFV 183
Query: 184 AFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFR 243
F+DVALWNAMVAGYVK EL NARKVF+EMPQRNVISWT LIAGYAQTNRP +A+ LFR
Sbjct: 184 GFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFR 243
Query: 244 MMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG 303
MQ+E+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG
Sbjct: 244 KMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSG 303
Query: 304 NIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLAILS 363
NIRRALEVF+NMK KSVITWST+IA LALHG G EAIDMF +ME+ +VRPNEVTF AILS
Sbjct: 304 NIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTAILS 363
Query: 364 ACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFEANA 423
ACSHVGMVDVGRYYFD+M+S+Y+I+P+IEHYGCMIDLLARAGYLQ+A KLL DMPFEANA
Sbjct: 364 ACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFEANA 423
Query: 424 AIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVM 483
IWGSLLAASNTH++A LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VRK+M
Sbjct: 424 MIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVRKLM 483
Query: 484 RNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQSKF 542
RNAGVKKAPGGS IEINN VYEFLAGDKSDS +HE+Y VLCK++ QL M GS +EE KF
Sbjct: 484 RNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEWCKF 543
BLAST of Sed0018552 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 520.0 bits (1338), Expect = 2.3e-147
Identity = 260/494 (52.63%), Postives = 356/494 (72.06%), Query Frame = 0
Query: 36 QIHGFMLQTALDQDNLLLGRFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQAS 95
Q H +M+ T L++DNL + +FI ACS+ G YAYSVF+++P P+ L N I+ALS
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLD 92
Query: 96 SPVS---AISLYSTIRIEGLRPDSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVN 155
P + AI++Y + +PD+++ PFVLK V+++ + GRQIH Q V D V+
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 156 VATSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMP--Q 215
V T IQMY SCG + DARK+FD + +DV +WNA++AGY K E+ AR + + MP
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 216 RNVISWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWI 275
RN +SWT +I+GYA++ R +A+ +F+ M +E VEPDE+ +LAVLSACADLG+LELGE I
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 276 HNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHG 335
+Y++ G+ R V L NA+IDMYAKSGNI +AL+VF+ + ++V+TW+T+IAGLA HGHG
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 336 GEAIDMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGC 395
EA+ MF +M +A VRPN+VTF+AILSACSHVG VD+G+ F+ M S Y I P IEHYGC
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 396 MIDLLARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPEN 455
MIDLL RAG L++A ++++ MPF+ANAAIWGSLLAASN H + EL E+AL L KLEP N
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 456 SGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKL 515
SGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ N VY+F++GD + ++
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQV 512
Query: 516 HEIYPVLCKMVAQL 525
I+ +L +M Q+
Sbjct: 513 ERIHEILQEMDLQI 526
BLAST of Sed0018552 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 399.4 bits (1025), Expect = 4.5e-111
Identity = 198/483 (40.99%), Postives = 305/483 (63.15%), Query Frame = 0
Query: 36 QIHGFMLQTALDQDNLLLGRFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQAS 95
+I+ ++ L Q + ++ + + C + YA +F+ +P++ L N+ I+A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 96 SPVSAISLYSTIRIEGLR-PDSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVA 155
I +Y + + PD ++ PF+ K+ L + +G+Q+H V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 156 TSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVI 215
+ I MY + DA K+FD + RDV WN++++GY + ++ A+ +F M + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 216 SWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDEIAMLAVLSACADLGALELGEWIHNYI 275
SWTA+I+GY +A+ FR MQ+ +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 276 EKHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAI 335
E+ G + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+G A HG+ AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 336 DMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDL 395
+ F +M+RA+V+PN +TFL +LSACSHVGM G YFD M Y+I+PKIEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 396 LARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNY 455
LARAG L++A ++ + MP + ++ IWGSLL++ T N ++A A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 456 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIY 515
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S EI
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEIS 507
Query: 516 PVL 518
VL
Sbjct: 508 IVL 510
BLAST of Sed0018552 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 390.6 bits (1002), Expect = 2.1e-108
Identity = 207/520 (39.81%), Postives = 298/520 (57.31%), Query Frame = 0
Query: 23 SILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFIGACSSLGLSS---YAYSVFSNKPHP 82
S L C + QIH ML+T L QD+ + +F+ C S S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 83 DLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSYSIPFVLKAVVKLAAIRVGRQIH 142
D L N I+ S + P ++ LY + ++Y+ P +LKA L+A QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 143 AQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELS 202
AQ + DV S I Y+ G A LFD + D WN+++ GYVKA ++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 203 NARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDEIAMLAVLSACA 262
A +F +M ++N ISWT +I+GY Q + ++A+ LF MQ VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 263 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWST 322
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 323 MIAGLALHGHGGEAIDMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVY 382
+I+G A HGHG EAI F +M++ ++PN +TF A+L+ACS+ G+V+ G+ F ME Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 383 KIKPKIEHYGCMIDLLARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQA 442
+KP IEHYGC++DLL RAG L +A++ +Q+MP + NA IWG+LL A H+N EL E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 443 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYE 502
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + T +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 503 FLAGDKSDSKLHEIYPVLCKMVAQLNMVGSLKEEQSKFLD 540
FLAGD+S ++ +I M +L G + E + LD
Sbjct: 499 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLD 538
BLAST of Sed0018552 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 386.3 bits (991), Expect = 4.0e-107
Identity = 222/620 (35.81%), Postives = 320/620 (51.61%), Query Frame = 0
Query: 16 NKPTIFTSILSNCCDPRHIYQIHGFMLQTALDQDNLLLGRFIGAC----SSLGLSSYAYS 75
N P++ S+L NC + + IH M++ L N L + I C GL YA S
Sbjct: 33 NHPSL--SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGL-PYAIS 92
Query: 76 VFSNKPHPDLRLCNAAIKALSQASSPVSAISLYSTIRIEGLRPDSYSIPFVLKAVVKLAA 135
VF P+L + N + + +S PVSA+ LY + GL P+SY+ PFVLK+ K A
Sbjct: 93 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 152
Query: 136 IRVGRQIHAQAVSSALDLDVNVATSFIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAG 195
+ G+QIH + DLD+ V TS I MY G + DA K+FD RDV + A++ G
Sbjct: 153 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 212
Query: 196 YVKAAELSNARKVFDEMPQRNVISWTALIAGYAQTNRPEDAVALFRMMQIEKVEPDE--- 255
Y + NA+K+FDE+P ++V+SW A+I+GYA+T ++A+ LF+ M V PDE
Sbjct: 213 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 272
Query: 256 ------------------------------------------------------------ 315
Sbjct: 273 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 332
Query: 316 --------------------------------------IAMLAVLSACADLGALELGEWI 375
+ ML++L ACA LGA+++G WI
Sbjct: 333 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 392
Query: 376 HNYIEKH--GLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHG 435
H YI+K G+ L +LIDMYAK G+I A +VF+++ HKS+ +W+ MI G A+HG
Sbjct: 393 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 452
Query: 436 HGGEAIDMFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHY 495
+ D+F +M + ++P+++TF+ +LSACSH GM+D+GR+ F M YK+ PK+EHY
Sbjct: 453 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 512
Query: 496 GCMIDLLARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEP 529
GCMIDLL +G ++A++++ M E + IW SLL A H N EL E +L K+EP
Sbjct: 513 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 572
BLAST of Sed0018552 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 384.0 bits (985), Expect = 2.0e-106
Identity = 187/493 (37.93%), Postives = 301/493 (61.05%), Query Frame = 0
Query: 37 IHGFMLQTALDQDNLLLGRFIGACSSLGLSSYAYSVFSNKPHPDLRLCNAAIKALSQASS 96
+HG +++A+ D + I S G A VF+ D+ N+ I Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 97 PVSAISLYSTIRIEGLRPDSYSIPFVLKAVVKLAAIRVGRQIHAQAVSSALDLDVNVATS 156
P A+ L+ + E ++ ++ VL A K+ + GRQ+ + + +++++ +A +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 157 FIQMYSSCGFVSDARKLFDFVAFRDVALWNAMVAGYVKAAELSNARKVFDEMPQRNVISW 216
+ MY+ CG + DA++LFD + +D W M+ GY + + AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 217 TALIAGYAQTNRPEDAVALFRMMQIEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 276
ALI+ Y Q +P +A+ +F +Q++K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 277 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFDNMKHKSVITWSTMIAGLALHGHGGEAID 336
KHG+ + +ALI MY+K G++ ++ EVF++++ + V WS MI GLA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 337 MFRQMERARVRPNEVTFLAILSACSHVGMVDVGRYYFDRMESVYKIKPKIEHYGCMIDLL 396
MF +M+ A V+PN VTF + ACSH G+VD F +MES Y I P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 397 ARAGYLQQAQKLLQDMPFEANAAIWGSLLAASNTHRNAELAEQALRHLAKLEPENSGNYT 456
R+GYL++A K ++ MP + ++WG+LL A H N LAE A L +LEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 457 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNTVYEFLAGDKSDSKLHEIYP 516
LLSN YA LG+W +RK MR G+KK PG S IEI+ ++EFL+GD + ++Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 517 VLCKMVAQLNMVG 529
L +++ +L G
Sbjct: 633 KLHEVMEKLKSNG 645
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7023735.1 | 1.8e-258 | 83.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022987264.1 | 1.8e-258 | 83.00 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima] | [more] |
XP_023515616.1 | 1.5e-257 | 82.82 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pep... | [more] |
XP_022960640.1 | 4.3e-257 | 82.72 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata] | [more] |
KAG6590068.1 | 5.3e-255 | 81.90 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q9FMA1 | 3.2e-146 | 52.63 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 6.4e-110 | 40.99 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 3.0e-107 | 39.81 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 5.6e-106 | 35.81 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 2.8e-105 | 37.93 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JID8 | 8.5e-259 | 83.00 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1H9N0 | 2.1e-257 | 82.72 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1D0Q9 | 2.8e-254 | 80.44 | pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=... | [more] |
A0A5D3CFJ6 | 2.5e-250 | 80.33 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7UQ55 | 9.5e-250 | 79.96 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56310.1 | 2.3e-147 | 52.63 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G20540.1 | 4.5e-111 | 40.99 | mitochondrial editing factor 21 | [more] |
AT5G66520.1 | 2.1e-108 | 39.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 4.0e-107 | 35.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 2.0e-106 | 37.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |