Sed0018526 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCGCATCCACGCCGCCGTTGTTGCCGGACGTTCATCATTCTCCGGCGGGCGGCGGAGCCTGGAGGTCTTCCGGTTCGATCGGGCCGTTCTTGGCGGTGATCTCTGTTTTAACTCTGCTTTCGGTTCTGTCTTGCTTTTTGGGAAGAATTTGCAGTCGCGGATATGAAGATCAAACGCCATTACGGAGTGGAAATTATTTGAGTTTTTTGAAGAGGAAGTTGCAGAAGCCATGTGTTCAAGACGTTGAGTTCAGTGATTGCAAGCTTAACAAAAATGGCAACCTTCAAAACTCTTCCTCTTAG ATGGCCACCGCATCCACGCCGCCGTTGTTGCCGGACGTTCATCATTCTCCGGCGGGCGGCGGAGCCTGGAGGTCTTCCGGTTCGATCGGGCCGTTCTTGGCGGTGATCTCTGTTTTAACTCTGCTTTCGGTTCTGTCTTGCTTTTTGGGAAGAATTTGCAGTCGCGGATATGAAGATCAAACGCCATTACGGAGTGGAAATTATTTGAGTTTTTTGAAGAGGAAGTTGCAGAAGCCATGTGTTCAAGACGTTGAGTTCAGTGATTGCAAGCTTAACAAAAATGGCAACCTTCAAAACTCTTCCTCTTAG ATGGCCACCGCATCCACGCCGCCGTTGTTGCCGGACGTTCATCATTCTCCGGCGGGCGGCGGAGCCTGGAGGTCTTCCGGTTCGATCGGGCCGTTCTTGGCGGTGATCTCTGTTTTAACTCTGCTTTCGGTTCTGTCTTGCTTTTTGGGAAGAATTTGCAGTCGCGGATATGAAGATCAAACGCCATTACGGAGTGGAAATTATTTGAGTTTTTTGAAGAGGAAGTTGCAGAAGCCATGTGTTCAAGACGTTGAGTTCAGTGATTGCAAGCTTAACAAAAATGGCAACCTTCAAAACTCTTCCTCTTAG MATASTPPLLPDVHHSPAGGGAWRSSGSIGPFLAVISVLTLLSVLSCFLGRICSRGYEDQTPLRSGNYLSFLKRKLQKPCVQDVEFSDCKLNKNGNLQNSSS Homology
BLAST of Sed0018526 vs. NCBI nr
Match: XP_022137289.1 (uncharacterized protein LOC111008787 [Momordica charantia]) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-21 Identity = 69/117 (58.97%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Sed0018526 vs. NCBI nr
Match: OVA07645.1 (hypothetical protein BVC80_7393g5 [Macleaya cordata]) HSP 1 Score: 70.5 bits (171), Expect = 9.6e-09 Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Sed0018526 vs. NCBI nr
Match: KAB1212726.1 (hypothetical protein CJ030_MR5G009768 [Morella rubra]) HSP 1 Score: 67.8 bits (164), Expect = 6.3e-08 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Sed0018526 vs. NCBI nr
Match: XP_030940931.1 (uncharacterized protein LOC115965771 [Quercus lobata]) HSP 1 Score: 66.2 bits (160), Expect = 1.8e-07 Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Sed0018526 vs. NCBI nr
Match: XP_006390472.1 (uncharacterized protein LOC18008564 [Eutrema salsugineum] >ESQ27758.1 hypothetical protein EUTSA_v10019432mg [Eutrema salsugineum]) HSP 1 Score: 65.9 bits (159), Expect = 2.4e-07 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Sed0018526 vs. ExPASy TrEMBL
Match: A0A6J1C6U1 (uncharacterized protein LOC111008787 OS=Momordica charantia OX=3673 GN=LOC111008787 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.2e-22 Identity = 69/117 (58.97%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Sed0018526 vs. ExPASy TrEMBL
Match: A0A200QB10 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_7393g5 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09 Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Sed0018526 vs. ExPASy TrEMBL
Match: A0A2N9HK44 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39992 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08 Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of Sed0018526 vs. ExPASy TrEMBL
Match: A0A6A1VLI4 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009768 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.0e-08 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Sed0018526 vs. ExPASy TrEMBL
Match: A0A7N2MQY5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.8e-08 Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Sed0018526 vs. TAIR 10
Match: AT1G74055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 9.3e-10 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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