Sed0018525 (gene) Chayote v1

Overview


Name	Sed0018525
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein At1g10780-like
Location	LG10: 32101008 .. 32103520 (-)
RNA-Seq Expression	Sed0018525
Synteny	Sed0018525

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCACTCCCTGATGCTATAGTTGAGTACATCTTGTCACTTATAAGCAATGCCCGGGACGTGGCGGTCTGCAACTGCGTATCCAAGCGATGGAAAGACTCCATGGCCTACATTCGAAGTCTCCATTTTCCCCGCAATTCGTTCGACAATCATACAGGCGGGTTGAGTCCCGACACCATCGTTTCGAGGTTAATTTCATCCATTGTTCACTTGGAGGAGCTTGTTGTTTATACCCCATTTTCAAGTACTGGCCTCTCGTTGTGGCTGTCTAGTGTCGGCCCCTCGCTTCGACGTCTCGAGCTACGGATGGACACTTTGGCTGATCCACCGGCTTCTCGACAAAGGACTTGCAAGCTGGAATGCCTTAACTCTGCACCAAATTTGGAATCACTTAAATTATGGGGTGTGTTAATGACACGTAAATTTAGTTGGAATGTGTTTCAAAAGATGAAAAGCCTTGAGATTGTTGGTGCCATGTTAGTGAGTTCTTCATTGGAAACTGTTCTTCGGGCTTGTCCGAATCTGTCGAACTTATTGATCTATAGCTGTGAAGGGTTAACTTCAGTTGCAATTAAGATGGAACACTTGGAGCAGTGTAAGCTGGACTTTTATAGCTTTGTGAACTGCACGCTTCTGATCCATTGCCCTAAAATTCATCTCCTTGAAGTTCAAGGTTGTGGTTGGATTGAAGTTCGTGGGACAAGTTCGTTGAGAAGTCTTTCGATTTCGAGTAATAGAGGTATTCATCATGATCTTCTAAAGCCAAGTTTGGTATGATTGTTGGAAGTGTGAAAATTGCTTTCTGTCAATTAATGATATTGAATGCTTTGTTCATAGTATACATATATGTGCTTTAAACACTCAATAGAAGTAACCACTAACCACTTCATTGGTGTTTCATCCACAAGTTATTAAGTTGTACATTCAAAAGTCAATACAAATGTTCTAATTAAAACACTACACTCAAAAGTCATTCCAAACTCTTTGTAGGACCTTTGTGATATTAAAGGGGTGTTTGGAGCAAGGAAGATGTGACTGATTATGGGGATGATGAGAATTAGAGAGAGAATACGGACAAGATATTGTCTATGTTTGGGGTGAAGAGAATGATTATAGAAAGAACTGTTTCTTGTGTTTGAGCTGAAAGAGAATAATTGTGGGCAGAACAAAAAGTAGTTACGAAGATAATATAAATTGGTATGAGGAAATGTGATTACGGAGGGACTGATTCTAGTGGCCCAAATGTACATAGGAGGATCACTCTTCCCTTAAACACTCTCATTCTCTTTGCCCTAAACACACCCAAAATGTAGACACGATACATGAATATTTGTTTCTTGTGTGATGGATCCCACATTGGAAAAGTGGAGAGATCTCATGACCTTTATTAGATCATAGGCAACTCCTCTCATTATCAATTAGTTTTGAAATAAGACGGTATGTTATCTAATACGATATTACAGCACATTAAATTCAAGTGGGCATTCGGTCCAAAAATTAGATACAACCTTAGAATTGTAAACCCAAAAAGGTATCATCTTGAAAGGACACGTTGAGGATCACACATTGTAAAGGTAAAGGTAAGGAAGCCTCACTCTTTATAAGATCATAAATTACTGCTCTTATGCATATGTTATCTATTATCTTGTTTGGAAACCTTTAATAGTAAGAGTCTAACAAGGTGTAAGTTTGCAAATGTTTTACTTTAAAAGTACTACATTTGAATGTCAATCCAAACTAACTTTAAGACCCTTGAGATTTGGGCTTCCAAATTTATCTTTATGGTTTACATGATACAAGAGATAACTTTGTGATATTAATTGTCTTATTATGTATCTTTACAGTTTGCAAAGTACAAGATAATAACTATGTTTTGTTTTTGTGTGGAAACCTTTGATAGGAACAATGTACATGGTGGATTTTGAGAAGCTTGTTTCATTGGAGTATCTATCCTTGAGAGGAGTTCAATGGTGTTGGGATGCAATAAGCAAAATTCTTGAATGTGGAAGTGAGGTGAAACATCTTTACATGAAAATTGAGTTCACTGGAGACTCTGATGCACTTGAACCTTTCCCACAAATTGACTTTGTTGACTTTTTCAACAACCATCCAAACTTGCAAAAGTTTGACATTCATGGAGGAATGTTTTCAGCACTTTCCCAGAAGAACAGCCTTAAAAATGTAAGTATAGAATCATTGCCAAACAAGAGATGAAACTTGTTCTTGAGATGAAATTTTCATGGCTTAGAAGTTGCTTTGTTTTGTTGCCTCAGGTGCATCCAGACTTTGTAATCTCGAGTTTAGAGGAAGTATCGGTTACGATTCGATCGCCGTTGAATCCCGAACATAAGATGAATACTCTCGAGTCGTTTTTAAAGTATGGGCCGAATTTGAAGACAATGGTGATCAATATTCTTAAGATAAATGCCAGCTATGGCAGTATGAATGATTTCTTTGATGAGATTTGCAAGTTGAGATATTTGAACAGTAAGATTGTTTGCATTGAATAA

mRNA sequence

ATGGACTCACTCCCTGATGCTATAGTTGAGTACATCTTGTCACTTATAAGCAATGCCCGGGACGTGGCGGTCTGCAACTGCGTATCCAAGCGATGGAAAGACTCCATGGCCTACATTCGAAGTCTCCATTTTCCCCGCAATTCGTTCGACAATCATACAGGCGGGTTGAGTCCCGACACCATCGTTTCGAGGTTAATTTCATCCATTGTTCACTTGGAGGAGCTTGTTGTTTATACCCCATTTTCAAGTACTGGCCTCTCGTTGTGGCTGTCTAGTGTCGGCCCCTCGCTTCGACGTCTCGAGCTACGGATGGACACTTTGGCTGATCCACCGGCTTCTCGACAAAGGACTTGCAAGCTGGAATGCCTTAACTCTGCACCAAATTTGGAATCACTTAAATTATGGGGTGTGTTAATGACACGTAAATTTAGTTGGAATGTGTTTCAAAAGATGAAAAGCCTTGAGATTGTTGGTGCCATGTTAGTGAGTTCTTCATTGGAAACTGTTCTTCGGGCTTGTCCGAATCTGTCGAACTTATTGATCTATAGCTGTGAAGGGTTAACTTCAGTTGCAATTAAGATGGAACACTTGGAGCAGTGTAAGCTGGACTTTTATAGCTTTGTGAACTGCACGCTTCTGATCCATTGCCCTAAAATTCATCTCCTTGAAGTTCAAGGTTGTGGTTGGATTGAAGTTCGTGGGACAAGTTCGTTGAGAAGTCTTTCGATTTCGAGTAATAGAGGAACAATGTACATGGTGGATTTTGAGAAGCTTGTTTCATTGGAGTATCTATCCTTGAGAGGAGTTCAATGGTGTTGGGATGCAATAAGCAAAATTCTTGAATGTGGAAGTGAGGTGAAACATCTTTACATGAAAATTGAGTTCACTGGAGACTCTGATGCACTTGAACCTTTCCCACAAATTGACTTTGTTGACTTTTTCAACAACCATCCAAACTTGCAAAAGTTTGACATTCATGGAGGAATGTTTTCAGCACTTTCCCAGAAGAACAGCCTTAAAAATGTGCATCCAGACTTTGTAATCTCGAGTTTAGAGGAAGTATCGGTTACGATTCGATCGCCGTTGAATCCCGAACATAAGATGAATACTCTCGAGTCGTTTTTAAAGTATGGGCCGAATTTGAAGACAATGGTGATCAATATTCTTAAGATAAATGCCAGCTATGGCAGTATGAATGATTTCTTTGATGAGATTTGCAAGTTGAGATATTTGAACAGTAAGATTGTTTGCATTGAATAA

Coding sequence (CDS)

ATGGACTCACTCCCTGATGCTATAGTTGAGTACATCTTGTCACTTATAAGCAATGCCCGGGACGTGGCGGTCTGCAACTGCGTATCCAAGCGATGGAAAGACTCCATGGCCTACATTCGAAGTCTCCATTTTCCCCGCAATTCGTTCGACAATCATACAGGCGGGTTGAGTCCCGACACCATCGTTTCGAGGTTAATTTCATCCATTGTTCACTTGGAGGAGCTTGTTGTTTATACCCCATTTTCAAGTACTGGCCTCTCGTTGTGGCTGTCTAGTGTCGGCCCCTCGCTTCGACGTCTCGAGCTACGGATGGACACTTTGGCTGATCCACCGGCTTCTCGACAAAGGACTTGCAAGCTGGAATGCCTTAACTCTGCACCAAATTTGGAATCACTTAAATTATGGGGTGTGTTAATGACACGTAAATTTAGTTGGAATGTGTTTCAAAAGATGAAAAGCCTTGAGATTGTTGGTGCCATGTTAGTGAGTTCTTCATTGGAAACTGTTCTTCGGGCTTGTCCGAATCTGTCGAACTTATTGATCTATAGCTGTGAAGGGTTAACTTCAGTTGCAATTAAGATGGAACACTTGGAGCAGTGTAAGCTGGACTTTTATAGCTTTGTGAACTGCACGCTTCTGATCCATTGCCCTAAAATTCATCTCCTTGAAGTTCAAGGTTGTGGTTGGATTGAAGTTCGTGGGACAAGTTCGTTGAGAAGTCTTTCGATTTCGAGTAATAGAGGAACAATGTACATGGTGGATTTTGAGAAGCTTGTTTCATTGGAGTATCTATCCTTGAGAGGAGTTCAATGGTGTTGGGATGCAATAAGCAAAATTCTTGAATGTGGAAGTGAGGTGAAACATCTTTACATGAAAATTGAGTTCACTGGAGACTCTGATGCACTTGAACCTTTCCCACAAATTGACTTTGTTGACTTTTTCAACAACCATCCAAACTTGCAAAAGTTTGACATTCATGGAGGAATGTTTTCAGCACTTTCCCAGAAGAACAGCCTTAAAAATGTGCATCCAGACTTTGTAATCTCGAGTTTAGAGGAAGTATCGGTTACGATTCGATCGCCGTTGAATCCCGAACATAAGATGAATACTCTCGAGTCGTTTTTAAAGTATGGGCCGAATTTGAAGACAATGGTGATCAATATTCTTAAGATAAATGCCAGCTATGGCAGTATGAATGATTTCTTTGATGAGATTTGCAAGTTGAGATATTTGAACAGTAAGATTGTTTGCATTGAATAA

Protein sequence

MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDTIVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKLECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLLIYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRSLSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSDALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRSPLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE

Homology

[Close]

BLAST of Sed0018525 vs. NCBI nr
Match: XP_023554775.1 (F-box protein At1g10780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636.0 bits (1639), Expect = 2.4e-178
Identity = 314/419 (74.94%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +YILS +SNARDVAVCNCVSKRWK S  YIRSL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. NCBI nr
Match: XP_022967595.1 (F-box protein At1g10780-like [Cucurbita maxima] >XP_022967596.1 F-box protein At1g10780-like [Cucurbita maxima])

HSP 1 Score: 634.8 bits (1636), Expect = 5.3e-178
Identity = 313/419 (74.70%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +YILS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 241 LSISNNTGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. NCBI nr
Match: KAG7011446.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634.8 bits (1636), Expect = 5.3e-178
Identity = 313/419 (74.70%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +YILS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. NCBI nr
Match: KAG6571722.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 634.8 bits (1636), Expect = 5.3e-178
Identity = 313/419 (74.70%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +YILS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 22  MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 81

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 82  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 141

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 142 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 201

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 202 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 261

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 262 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 321

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 322 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 381

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 382 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 440

[Close]

BLAST of Sed0018525 vs. NCBI nr
Match: XP_022963854.1 (F-box protein At1g10780-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 6.9e-178
Identity = 312/419 (74.46%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +Y+LS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. ExPASy Swiss-Prot
Match: Q9SAC4 (F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.2e-132
Identity = 239/419 (57.04%), Postives = 306/419 (73.03%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI++YILS +++ARDVA CNCVSKRWK+S   ++S+ F RNSF++       D+
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           IV ++ISS   LEELVVY+PF+S+GL+ W+  V  SLR LELRMD LA      +   KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           +C+  A NLE LKLWGVLM     W++F  ++SLEIVGA +  SSL   LRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           + +CEG+ S++I + +LE CKLDFY   N  L++   ++  L+VQGC WI V  T  L++
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSISS  G +YMVDF  L SLE LS+RGVQWCWDAI  IL+   +VKHL+MK+EFTG ++
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTG-NE 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           AL+PFP+IDFV+FFNNHP LQ FDIHG MF+AL QKNSLK +   F I  LEEV +T+RS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KY   LK MVI IL++ +++ S +DF D+ICK R++N  +V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of Sed0018525 vs. ExPASy TrEMBL
Match: A0A6J1HSM0 (F-box protein At1g10780-like OS=Cucurbita maxima OX=3661 GN=LOC111467046 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.6e-178
Identity = 313/419 (74.70%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +YILS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 241 LSISNNTGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. ExPASy TrEMBL
Match: A0A6J1HJ43 (F-box protein At1g10780-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464040 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.3e-178
Identity = 312/419 (74.46%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +Y+LS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 22  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 81

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 82  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 141

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 142 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 201

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 202 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 261

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 262 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 321

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 322 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 381

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 382 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 440

[Close]

BLAST of Sed0018525 vs. ExPASy TrEMBL
Match: A0A6J1HLE6 (F-box protein At1g10780-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464040 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 3.3e-178
Identity = 312/419 (74.46%), Postives = 354/419 (84.49%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI +Y+LS +SNARDVAVCNCVSKRWK S  YI+SL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PFS  GL+ WLSSVGPSLRRLELRMD L D  A +    KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLESLKLWGVLMT    W+VFQK+++LEIVGA L   +L T LRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           +  CEGLTSV+I+++HLEQCKLDFY   NC+L+I+ P I LLEVQGC WI   GTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSIS+N G +YMVDF++LVSLE LS+RGVQWCWDAISK+LE GSEVKHLYMK+EFTGD D
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSLKNV PDFVIS LEEVSV++RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KYG NLKTMVI IL++ +S+ S +DFFDEICK RY N KIV IE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. ExPASy TrEMBL
Match: A0A6J1DL82 (F-box protein At1g10780 OS=Momordica charantia OX=3673 GN=LOC111022152 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 5.3e-176
Identity = 305/419 (72.79%), Postives = 353/419 (84.25%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAIV+YILS +SNARDVAVCNCVSKRWKDS  YIRSL+FPRNSFDNH+GG+SPD 
Sbjct: 1   MDSLPDAIVQYILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGVSPDA 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           ++ +++SSIVHLEELVVY+PFS  GLS WLS+VGPSLRRLELRMD L D  A ++   KL
Sbjct: 61  VIWKILSSIVHLEELVVYSPFSGAGLSSWLSTVGPSLRRLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           EC+  A NLESLKLWGVLMT    W+VF K+K+LEIVGA L   +L T LR CPNLS LL
Sbjct: 121 ECIKCAANLESLKLWGVLMTHSPKWDVFHKLKNLEIVGAKLEDPALNTALRECPNLSKLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           + +CEGLTSV+I +++LE+CKLDFY   NC+L+I+ PKI LLEVQGC WI   GTSSLRS
Sbjct: 181 LLACEGLTSVSIDLKYLEECKLDFYGLGNCSLMINSPKIQLLEVQGCSWIRAHGTSSLRS 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSI++N G +YMV F+KLVSLE LSLRGVQWCWDAISK+LE GS+VKHLYMK+EFTGD D
Sbjct: 241 LSIANNAGRVYMVSFDKLVSLESLSLRGVQWCWDAISKMLEWGSQVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QKNSL+NV PDFVIS LEEVSV +RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLQNVDPDFVISCLEEVSVLVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KM+TLES +KYG NL+TMVI ILK+ +S+ S +DFFDEICK RYLN KIV IE
Sbjct: 361 PLNAEQKMSTLESLIKYGKNLRTMVIKILKMKSSHSSADDFFDEICKFRYLNRKIVRIE 419

[Close]

BLAST of Sed0018525 vs. ExPASy TrEMBL
Match: A0A5D3CQW5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00320 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.5e-175
Identity = 304/419 (72.55%), Postives = 353/419 (84.25%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAIV+ ILS +SNARDVAVCNCVSKRWKDS  YIRSL+FPRNSFDNH+GGLSPD 
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDN 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           I+ R+ISSIVHLEELVVY+PF+  GLS WLSSVGPSLR LELRMD L D  A ++   KL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLSSWLSSVGPSLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           ECL SA NLE+LKLWGVLMT    W+VFQK+K+LEIVGA     +L T L ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           + +CEGL+SV+I+++ LEQCKLDFY   NC+LLI+ PK+ LLEVQGC WI  RGT+SLR+
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTTSLRN 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSI++N G +YMVDF+KLVSLE LSLRG+QWCW AIS+ILECGSEVKHLYMK+EFTGD D
Sbjct: 241 LSIANNHGRVYMVDFDKLVSLETLSLRGIQWCWSAISRILECGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           ALEPFP+IDFV+FFNNHP LQKFDIHG MF+AL QK+SLK+V PDF IS LEEV VT+RS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLESF KY  NLK +VINIL++ +S+GS +DFFD+ICK R+ + KIV IE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFRHCHPKIVRIE 419

[Close]

BLAST of Sed0018525 vs. TAIR 10
Match: AT1G10780.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 474.6 bits (1220), Expect = 8.5e-134
Identity = 239/419 (57.04%), Postives = 306/419 (73.03%), Query Frame = 0


Query: 1   MDSLPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDT 60
           MDSLPDAI++YILS +++ARDVA CNCVSKRWK+S   ++S+ F RNSF++       D+
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IVSRLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKL 120
           IV ++ISS   LEELVVY+PF+S+GL+ W+  V  SLR LELRMD LA      +   KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLNSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSSSLETVLRACPNLSNLL 180
           +C+  A NLE LKLWGVLM     W++F  ++SLEIVGA +  SSL   LRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 IYSCEGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSLRS 240
           + +CEG+ S++I + +LE CKLDFY   N  L++   ++  L+VQGC WI V  T  L++
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSISSNRGTMYMVDFEKLVSLEYLSLRGVQWCWDAISKILECGSEVKHLYMKIEFTGDSD 300
           LSISS  G +YMVDF  L SLE LS+RGVQWCWDAI  IL+   +VKHL+MK+EFTG ++
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTG-NE 300

Query: 301 ALEPFPQIDFVDFFNNHPNLQKFDIHGGMFSALSQKNSLKNVHPDFVISSLEEVSVTIRS 360
           AL+PFP+IDFV+FFNNHP LQ FDIHG MF+AL QKNSLK +   F I  LEEV +T+RS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNPEHKMNTLESFLKYGPNLKTMVINILKINASYGSMNDFFDEICKLRYLNSKIVCIE 420
           PLN E KMNTLES +KY   LK MVI IL++ +++ S +DF D+ICK R++N  +V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of Sed0018525 vs. TAIR 10
Match: AT4G15475.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 6.3e-04
Identity = 60/248 (24.19%), Postives = 110/248 (44.35%), Query Frame = 0


Query: 4   LPDAIVEYILSLISNARDVAVCNCVSKRWKDSMAYIRSLHFPRNSFDNHTGGLSPDTIVS 63
           LP+ ++  I   + +  +   C+ V KRW     + R+      SF       SPD  +S
Sbjct: 11  LPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASF-------SPDDFIS 70

Query: 64  RLISSIVHLEELVVYTPFSSTGLSLWLSSVGPSLRRLELRMDTLADPPASRQRTCKLECL 123
            L    +++  + V        +S+ L S+ PS +R   R    + P +S+++    +  
Sbjct: 71  LLSRRFLYITSIHV-----DERISVSLPSLSPSPKRKRGR--DSSSPSSSKRKKLTDKTH 130

Query: 124 NSAPNLESLKLWGVLMTRKFSWNVFQKMKSLEIVGAMLVSS-SLETVLRACPNLSNLLIY 183
           + A N+ES  L    +T     N F ++++L ++    VSS  L ++ + C +L +L + 
Sbjct: 131 SGAENVESSSLTDTGLTALA--NGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQ 190

Query: 184 SC----EGLTSVAIKMEHLEQCKLDFYSFVNCTLLIHCPKIHLLEVQGCGWIEVRGTSSL 243
            C    +GL +V    + LE+  L F     C  L     I L  V GC       + SL
Sbjct: 191 GCYVGDQGLAAVGKFCKQLEELNLRF-----CEGLTDVGVIDL--VVGC-------SKSL 228

Query: 244 RSLSISSN 247
           +S+ ++++
Sbjct: 251 KSIGVAAS 228

The following BLAST results are available for this feature:

BLAST of Sed0018525 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554775.1	2.4e-178	74.94	F-box protein At1g10780-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967595.1	5.3e-178	74.70	F-box protein At1g10780-like [Cucurbita maxima] >XP_022967596.1 F-box protein At...	[more]
KAG7011446.1	5.3e-178	74.70	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571722.1	5.3e-178	74.70	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022963854.1	6.9e-178	74.46	F-box protein At1g10780-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Sed0018525 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAC4	1.2e-132	57.04	F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1	[more]

BLAST of Sed0018525 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSM0	2.6e-178	74.70	F-box protein At1g10780-like OS=Cucurbita maxima OX=3661 GN=LOC111467046 PE=4 SV...	[more]
A0A6J1HJ43	3.3e-178	74.46	F-box protein At1g10780-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HLE6	3.3e-178	74.46	F-box protein At1g10780-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DL82	5.3e-176	72.79	F-box protein At1g10780 OS=Momordica charantia OX=3673 GN=LOC111022152 PE=4 SV=1	[more]
A0A5D3CQW5	4.5e-175	72.55	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00320 ...	[more]

BLAST of Sed0018525 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10780.1	8.5e-134	57.04	F-box/RNI-like superfamily protein	[more]
AT4G15475.1	6.3e-04	24.19	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 2..303 e-value: 2.6E-15 score: 57.7
None	No IPR available	PANTHER	PTHR31639	F-BOX PROTEIN-LIKE	coord: 1..412
None	No IPR available	PANTHER	PTHR31639:SF162	OS11G0130500 PROTEIN	coord: 1..412
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 64..333
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018525.1	Sed0018525.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding