Sed0018500 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCGAACAACAAAATTTTCCATCACTTTCCCGAGAAAATCTTCACATGAAAAATGTCTTCCACCGGAATCAATAATTCCAACAGCATCCGCCGCATCGTCAGCCTCCGCCAGATGCTCCGGCGATGGCGGAAGAAAGCTCGCGTCGCCGCCTCCTCTCGCGGCGGCGCCGCCGCCGCTCCGTCGGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCAATTCTAAACGGTTCATCGTCCGGGCCACTTACTTGAACCACCCGGTCTTCCAGAACCTTCTTCAGAAAGCCGAAGAGGAGTACGGTTTTGCGAACCACGGTCCACTTGCCATTCCTTGCGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCCGGTCGGTTTTATCGCCTCTGCCACGTGGACTCCCGGAGTTGTGTTTTACGTGAATCTCGGCCGTTGCTTTTTGATTTGGCCGATAAGTCCGTTTGTTAGATGGAAACTCTTGTTAGAATTTTTTTTTTTTAAGCACAAAATTAATATTTGATTATTAAATTCTGCTATTTTAGGTGGAAAAAATACACATGCC CTCCGAACAACAAAATTTTCCATCACTTTCCCGAGAAAATCTTCACATGAAAAATGTCTTCCACCGGAATCAATAATTCCAACAGCATCCGCCGCATCGTCAGCCTCCGCCAGATGCTCCGGCGATGGCGGAAGAAAGCTCGCGTCGCCGCCTCCTCTCGCGGCGGCGCCGCCGCCGCTCCGTCGGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCAATTCTAAACGGTTCATCGTCCGGGCCACTTACTTGAACCACCCGGTCTTCCAGAACCTTCTTCAGAAAGCCGAAGAGGAGTACGGTTTTGCGAACCACGGTCCACTTGCCATTCCTTGCGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCCGGTCGGTTTTATCGCCTCTGCCACGTGGACTCCCGGAGTTGTGTTTTACGTGAATCTCGGCCGTTGCTTTTTGATTTGGCCGATAAGTCCGTTTGTTAGATGGAAACTCTTGTTAGAATTTTTTTTTTTTAAGCACAAAATTAATATTTGATTATTAAATTCTGCTATTTTAGGTGGAAAAAATACACATGCC ATGTCTTCCACCGGAATCAATAATTCCAACAGCATCCGCCGCATCGTCAGCCTCCGCCAGATGCTCCGGCGATGGCGGAAGAAAGCTCGCGTCGCCGCCTCCTCTCGCGGCGGCGCCGCCGCCGCTCCGTCGGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCAATTCTAAACGGTTCATCGTCCGGGCCACTTACTTGAACCACCCGGTCTTCCAGAACCTTCTTCAGAAAGCCGAAGAGGAGTACGGTTTTGCGAACCACGGTCCACTTGCCATTCCTTGCGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCCGGTCGGTTTTATCGCCTCTGCCACGTGGACTCCCGGAGTTGTGTTTTACGTGAATCTCGGCCGTTGCTTTTTGATTTGGCCGATAAGTCCGTTTGTTAG MSSTGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRLCHVDSRSCVLRESRPLLFDLADKSVC Homology
BLAST of Sed0018500 vs. NCBI nr
Match: XP_038888410.1 (indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]) HSP 1 Score: 223.0 bits (567), Expect = 1.7e-54 Identity = 115/151 (76.16%), Postives = 127/151 (84.11%), Query Frame = 0
BLAST of Sed0018500 vs. NCBI nr
Match: KAG6572078.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011742.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.9 bits (564), Expect = 3.7e-54 Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of Sed0018500 vs. NCBI nr
Match: XP_023554734.1 (auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54 Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of Sed0018500 vs. NCBI nr
Match: XP_022969444.1 (auxin-induced protein 6B-like [Cucurbita maxima] >XP_022975447.1 auxin-induced protein 6B-like [Cucurbita maxima]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 114/150 (76.00%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of Sed0018500 vs. NCBI nr
Match: XP_022952621.1 (auxin-induced protein 6B-like [Cucurbita moschata]) HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53 Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12 Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.2e-12 Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A6J1I2L6 (auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.2e-54 Identity = 114/150 (76.00%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A6J1GKR4 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.9e-54 Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A0A0K0H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53 Identity = 114/149 (76.51%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A5D3CM24 (Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001330 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52 Identity = 112/149 (75.17%), Postives = 127/149 (85.23%), Query Frame = 0
BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A1S3BJN8 (auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.4e-52 Identity = 111/149 (74.50%), Postives = 127/149 (85.23%), Query Frame = 0
BLAST of Sed0018500 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38 Identity = 82/148 (55.41%), Postives = 105/148 (70.95%), Query Frame = 0
BLAST of Sed0018500 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36 Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 0
BLAST of Sed0018500 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 144.4 bits (363), Expect = 7.0e-35 Identity = 77/147 (52.38%), Postives = 103/147 (70.07%), Query Frame = 0
BLAST of Sed0018500 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 134.4 bits (337), Expect = 7.3e-32 Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Sed0018500 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 134.4 bits (337), Expect = 7.3e-32 Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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