Sed0018500 (gene) Chayote v1

Overview


Name	Sed0018500
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein SAUR36-like
Location	LG04: 47093519 .. 47094106 (-)
RNA-Seq Expression	Sed0018500
Synteny	Sed0018500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCGAACAACAAAATTTTCCATCACTTTCCCGAGAAAATCTTCACATGAAAAATGTCTTCCACCGGAATCAATAATTCCAACAGCATCCGCCGCATCGTCAGCCTCCGCCAGATGCTCCGGCGATGGCGGAAGAAAGCTCGCGTCGCCGCCTCCTCTCGCGGCGGCGCCGCCGCCGCTCCGTCGGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCAATTCTAAACGGTTCATCGTCCGGGCCACTTACTTGAACCACCCGGTCTTCCAGAACCTTCTTCAGAAAGCCGAAGAGGAGTACGGTTTTGCGAACCACGGTCCACTTGCCATTCCTTGCGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCCGGTCGGTTTTATCGCCTCTGCCACGTGGACTCCCGGAGTTGTGTTTTACGTGAATCTCGGCCGTTGCTTTTTGATTTGGCCGATAAGTCCGTTTGTTAGATGGAAACTCTTGTTAGAATTTTTTTTTTTTAAGCACAAAATTAATATTTGATTATTAAATTCTGCTATTTTAGGTGGAAAAAATACACATGCC

mRNA sequence

CTCCGAACAACAAAATTTTCCATCACTTTCCCGAGAAAATCTTCACATGAAAAATGTCTTCCACCGGAATCAATAATTCCAACAGCATCCGCCGCATCGTCAGCCTCCGCCAGATGCTCCGGCGATGGCGGAAGAAAGCTCGCGTCGCCGCCTCCTCTCGCGGCGGCGCCGCCGCCGCTCCGTCGGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCAATTCTAAACGGTTCATCGTCCGGGCCACTTACTTGAACCACCCGGTCTTCCAGAACCTTCTTCAGAAAGCCGAAGAGGAGTACGGTTTTGCGAACCACGGTCCACTTGCCATTCCTTGCGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCCGGTCGGTTTTATCGCCTCTGCCACGTGGACTCCCGGAGTTGTGTTTTACGTGAATCTCGGCCGTTGCTTTTTGATTTGGCCGATAAGTCCGTTTGTTAGATGGAAACTCTTGTTAGAATTTTTTTTTTTTAAGCACAAAATTAATATTTGATTATTAAATTCTGCTATTTTAGGTGGAAAAAATACACATGCC

Coding sequence (CDS)

ATGTCTTCCACCGGAATCAATAATTCCAACAGCATCCGCCGCATCGTCAGCCTCCGCCAGATGCTCCGGCGATGGCGGAAGAAAGCTCGCGTCGCCGCCTCCTCTCGCGGCGGCGCCGCCGCCGCTCCGTCGGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCAATTCTAAACGGTTCATCGTCCGGGCCACTTACTTGAACCACCCGGTCTTCCAGAACCTTCTTCAGAAAGCCGAAGAGGAGTACGGTTTTGCGAACCACGGTCCACTTGCCATTCCTTGCGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGAATCCGGTCGGTTTTATCGCCTCTGCCACGTGGACTCCCGGAGTTGTGTTTTACGTGAATCTCGGCCGTTGCTTTTTGATTTGGCCGATAAGTCCGTTTGTTAG

Protein sequence

MSSTGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRLCHVDSRSCVLRESRPLLFDLADKSVC

Homology

[Close]

BLAST of Sed0018500 vs. NCBI nr
Match: XP_038888410.1 (indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-54
Identity = 115/151 (76.16%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASS-RGGAAAAPSDVPAGHVAVCVGTNSKR 62
           STGI  SN+IRRIVS+RQML+RWRKKARV ASS R G   APSDVPAGHVA+CVG++ +R
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRSGTGDAPSDVPAGHVAICVGSSCRR 61

Query: 63  FIVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFY--- 122
           F+VRATYLNHP+FQ LL +AEEEYGF N GPLAIPCDESVFEEVLRTVSRS+SGRF    
Sbjct: 62  FVVRATYLNHPIFQKLLLQAEEEYGFTNQGPLAIPCDESVFEEVLRTVSRSDSGRFLNFQ 121

Query: 123 ---RLCHVDSRSCVLRESRPLLFDLADKSVC 147
              R CHVDS S +LRESRPLLFD ADKSVC
Sbjct: 122 DFRRRCHVDSPSSLLRESRPLLFDFADKSVC 152

[Close]

BLAST of Sed0018500 vs. NCBI nr
Match: KAG6572078.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011742.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.9 bits (564), Expect = 3.7e-54
Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWR+KARV ASSR  A   PSDVPAGHVAVCVG++ +RF
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR-SAGDTPSDVPAGHVAVCVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+F+ LL +AEEEYGFAN GPLAIPCDESVFEEVLRTVSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSVC 147
               CHVDS S +LRESRPLLFD ADKSVC
Sbjct: 122 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 150

[Close]

BLAST of Sed0018500 vs. NCBI nr
Match: XP_023554734.1 (auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54
Identity = 115/150 (76.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWR+KARV ASSR  A   PSDVPAGHVAVCVG++ +RF
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR-CAGDTPSDVPAGHVAVCVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+F+ LL +AEEEYGFAN GPLAIPCDESVFEEVLRTVSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSVC 147
               CHVDS S +LRESRPLLFD ADKSVC
Sbjct: 122 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 150

[Close]

BLAST of Sed0018500 vs. NCBI nr
Match: XP_022969444.1 (auxin-induced protein 6B-like [Cucurbita maxima] >XP_022975447.1 auxin-induced protein 6B-like [Cucurbita maxima])

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53
Identity = 114/150 (76.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWR+KARV ASSR  A   PSDVPAGHVAVCVG++ +RF
Sbjct: 2   STGIVKSNNIRRIVSIRQMLQRWRRKARVTASSR-SAGDTPSDVPAGHVAVCVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+F+ LL +AEEEYGFAN GPLAIPCDESVFEEVLRTVSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSVC 147
               CHVDS + +LRESRPLLFD ADKSVC
Sbjct: 122 FCRRCHVDSPTSLLRESRPLLFDFADKSVC 150

[Close]

BLAST of Sed0018500 vs. NCBI nr
Match: XP_022952621.1 (auxin-induced protein 6B-like [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 1.8e-53
Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWR+KARV ASSR  A   PSDVPAGHVAVCVG++ +RF
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR-SAGDTPSDVPAGHVAVCVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+F+ LL +AEEEYGFAN GPLAIPCDESVFEEVLR VSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRIVSRSESGRFLNLPD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSVC 147
               CHVDS S +LRESRPLLFD ADKSVC
Sbjct: 122 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 150

[Close]

BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 21  MLRRWRKKARVAASSRGGA---AAAPSDVPAGHVAVCVGTNSKRFIVRATYLNHPVFQNL 80
           ML++  K+        GG       P DVP GH  V VG N  R+IV  ++L HP FQ+L
Sbjct: 15  MLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSL 74

Query: 81  LQKAEEEYGFANHGPLAIPCDESVFE 104
           LQ+AEEE+GF +   L IPCDE VF+
Sbjct: 75  LQRAEEEFGFDHDMGLTIPCDELVFQ 100

[Close]

BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 40  AAAPSDVPAGHVAVCVGTNSKRFIVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDE 99
           A   S VP+GHV V VG + +RF+V A  LNHPVF  LL ++ +EYG+   G L IPC+ 
Sbjct: 42  ATVASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNV 101

Query: 100 SVFEEVLRTV 110
            VFE+V+ ++
Sbjct: 102 FVFEQVVESL 111

[Close]

BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 46  VPAGHVAVCVGTNSKRFIVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEV 105
           VPAGHV V VG   +RF+V A  +NHP+F  LL ++ +EYG+A  G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 106 LRTV 110
           + T+
Sbjct: 114 VETL 117

[Close]

BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-12
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 30  RVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIVRATYLNHPVFQNLLQKAEEEYGFAN 89
           R   S+R  A++   D P G++AV VG N KRF++  ++LN P+FQ+LL +AEEE+G+ +
Sbjct: 9   RKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDH 68

Query: 90  -HGPLAIPCDESVFEEVLRTVS 111
             G L IPC E +F+ +   +S
Sbjct: 69  PMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of Sed0018500 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 44  SDVPAGHVAVCVGTNSKRFIVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFE 103
           S VP GHV V VG   +RF+V A  LNHPVF  LL ++ +EYG+   G L IPC   VFE
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 104 EVLRTV 110
            ++ ++
Sbjct: 108 RIMESL 113

[Close]

BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A6J1I2L6 (auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.2e-54
Identity = 114/150 (76.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWR+KARV ASSR  A   PSDVPAGHVAVCVG++ +RF
Sbjct: 2   STGIVKSNNIRRIVSIRQMLQRWRRKARVTASSR-SAGDTPSDVPAGHVAVCVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+F+ LL +AEEEYGFAN GPLAIPCDESVFEEVLRTVSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSVC 147
               CHVDS + +LRESRPLLFD ADKSVC
Sbjct: 122 FCRRCHVDSPTSLLRESRPLLFDFADKSVC 150

[Close]

BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A6J1GKR4 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.9e-54
Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWR+KARV ASSR  A   PSDVPAGHVAVCVG++ +RF
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR-SAGDTPSDVPAGHVAVCVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+F+ LL +AEEEYGFAN GPLAIPCDESVFEEVLR VSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRIVSRSESGRFLNLPD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSVC 147
               CHVDS S +LRESRPLLFD ADKSVC
Sbjct: 122 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 150

[Close]

BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A0A0K0H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 114/149 (76.51%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWRKKARV ASSR  A  APSDVPAGHVA+CVG++ +RF
Sbjct: 2   STGIGKSNNIRRIVSIRQMLQRWRKKARVTASSR-RAGDAPSDVPAGHVAICVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+FQ LL +AEEEYGF N GPLAIPC+ESVFEEVLRTVSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSV 146
               CHVDS S +LRESRPLLFD ADKSV
Sbjct: 122 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

[Close]

BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A5D3CM24 (Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001330 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52
Identity = 112/149 (75.17%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWRKKARV ASSR  A+ AP+DVPAGHVA+CVG++ +RF
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRKKARVTASSR-RASDAPTDVPAGHVAICVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRATYLNHP+FQ LL +AEEEYGF N GPLAIPC+ESVFEEVLR+VSRSESGRF  L  
Sbjct: 62  VVRATYLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSV 146
               CHVDS S +LRESRPLLFD ADKSV
Sbjct: 122 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

[Close]

BLAST of Sed0018500 vs. ExPASy TrEMBL
Match: A0A1S3BJN8 (auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.4e-52
Identity = 111/149 (74.50%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 3   STGINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRF 62
           STGI  SN+IRRIVS+RQML+RWRKKARV ASSR  A+ AP+DVPAGHVA+CVG++ +RF
Sbjct: 2   STGIAKSNNIRRIVSIRQMLQRWRKKARVTASSR-RASDAPTDVPAGHVAICVGSSCRRF 61

Query: 63  IVRATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-- 122
           +VRAT+LNHP+FQ LL +AEEEYGF N GPLAIPC+ESVFEEVLR+VSRSESGRF  L  
Sbjct: 62  VVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 121

Query: 123 ----CHVDSRSCVLRESRPLLFDLADKSV 146
               CHVDS S +LRESRPLLFD ADKSV
Sbjct: 122 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

[Close]

BLAST of Sed0018500 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38
Identity = 82/148 (55.41%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 10  NSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIVRATYL 69
           + IR IV LRQMLRRWR KAR+++ SR      PSDVP+GHVAVCVG+  +RF+VRA+YL
Sbjct: 9   SKIRHIVRLRQMLRRWRNKARLSSVSR----CVPSDVPSGHVAVCVGSGCRRFVVRASYL 68

Query: 70  NHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGRFYRL-CHVDSRSC 129
           NHP+  NLL +AEEE+GFAN GPL IPC+ESVFEE +R +SRS+S R  R  C  D + C
Sbjct: 69  NHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDDLQKC 128

Query: 130 -----------VLRESRPLLFDLADKSV 146
                      ++ ESRPLL  +A+K++
Sbjct: 129 NGGIKIKSKLDLMIESRPLLHGVAEKAI 152

[Close]

BLAST of Sed0018500 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 5   GINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIV 64
           G+   + IR IV LRQMLRRWR +AR+++S    +   PSDVP+GHVAV VG++ +RF+V
Sbjct: 4   GLGKCSKIRHIVRLRQMLRRWRDQARMSSSF---SRCVPSDVPSGHVAVYVGSSCRRFVV 63

Query: 65  RATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRSESGR-------- 124
           RATYLNHPV +NLL +AEEE+GF N GPL IPC+ESVFEE +R +SRS+S R        
Sbjct: 64  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 123

Query: 125 -FYRLCHV---DSRSCVLRESRPLLFDLADKSV 146
            F + CHV    S+  +  ESRPLL  + +K+V
Sbjct: 124 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAV 153

[Close]

BLAST of Sed0018500 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-35
Identity = 77/147 (52.38%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 5   GINNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIV 64
           GI   + IR IV LRQMLR+WR KAR+++  R    + PSDVP+GHVAV VG + +RF+V
Sbjct: 4   GIGKCSKIRHIVKLRQMLRQWRNKARMSSVRR----SVPSDVPSGHVAVYVGRSCRRFVV 63

Query: 65  RATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSRS------ESGRFY 124
            ATYLNHP+  NLL KAEEE+GFAN GPL IPC+ESVFEE +R ++RS      +  +  
Sbjct: 64  LATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITRSSRFTCTDDLKKN 123

Query: 125 RLCHVDSRSCVLRESRPLLFDLADKSV 146
           R   + S+  +L ESRPLL  +++K++
Sbjct: 124 RHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of Sed0018500 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.4 bits (337), Expect = 7.3e-32
Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 6   INNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIVR 65
           +  +N I  +V +RQML++W+KKA + +S+        SDVP GHVAV VG N +R++VR
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPV----SDVPPGHVAVSVGENRRRYVVR 60

Query: 66  ATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSR----SESGR----- 125
           A +LNHP+F+ LL +AEEEYGFAN GPLAIPCDES+FE+++  V+R    S SGR     
Sbjct: 61  AKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPA 120

Query: 126 -----FYRLCHVDSRSCVLRESRPLLFDLADKSVC 147
                  R  HV      + ESRPLL  +A+KSVC
Sbjct: 121 ATLEDLRRCSHVGLAKNNV-ESRPLLPGIAEKSVC 150

[Close]

BLAST of Sed0018500 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.4 bits (337), Expect = 7.3e-32
Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0


Query: 6   INNSNSIRRIVSLRQMLRRWRKKARVAASSRGGAAAAPSDVPAGHVAVCVGTNSKRFIVR 65
           +  +N I  +V +RQML++W+KKA + +S+        SDVP GHVAV VG N +R++VR
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPV----SDVPPGHVAVSVGENRRRYVVR 60

Query: 66  ATYLNHPVFQNLLQKAEEEYGFANHGPLAIPCDESVFEEVLRTVSR----SESGR----- 125
           A +LNHP+F+ LL +AEEEYGFAN GPLAIPCDES+FE+++  V+R    S SGR     
Sbjct: 61  AKHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPA 120

Query: 126 -----FYRLCHVDSRSCVLRESRPLLFDLADKSVC 147
                  R  HV      + ESRPLL  +A+KSVC
Sbjct: 121 ATLEDLRRCSHVGLAKNNV-ESRPLLPGIAEKSVC 150

The following BLAST results are available for this feature:

BLAST of Sed0018500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888410.1	1.7e-54	76.16	indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]	[more]
KAG6572078.1	3.7e-54	76.67	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_023554734.1	8.3e-54	76.67	auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969444.1	1.1e-53	76.00	auxin-induced protein 6B-like [Cucurbita maxima] >XP_022975447.1 auxin-induced p...	[more]
XP_022952621.1	1.8e-53	76.00	auxin-induced protein 6B-like [Cucurbita moschata]	[more]

BLAST of Sed0018500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.3e-12	46.51	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
O64538	1.6e-12	48.57	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
Q9SA49	2.8e-12	51.56	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
P32295	6.2e-12	42.68	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9LTV3	1.8e-11	48.48	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]

BLAST of Sed0018500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2L6	5.2e-54	76.00	auxin-induced protein 6B-like OS=Cucurbita maxima OX=3661 GN=LOC111468443 PE=3 S...	[more]
A0A6J1GKR4	8.9e-54	76.00	auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111455254 PE=3...	[more]
A0A0A0K0H1	1.5e-53	76.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=3 SV=1	[more]
A0A5D3CM24	2.2e-52	75.17	Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BJN8	6.4e-52	74.50	auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=...	[more]

BLAST of Sed0018500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19840.1	1.4e-38	55.41	SAUR-like auxin-responsive protein family	[more]
AT1G75590.1	1.3e-36	53.59	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	7.0e-35	52.38	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	7.3e-32	49.03	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	7.3e-32	49.03	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 18..108 e-value: 7.3E-31 score: 106.2
None	No IPR available	PANTHER	PTHR31374:SF180	SMALL AUXIN-UP RNA-RELATED	coord: 8..139
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 8..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018500.1	Sed0018500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin