
Sed0018471 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTCTTGGCGAAGCTTTTCACAGCACTTCTTTTCGTCTCTCTTATTTCCAAAGGTATAAATAAATATAAAATTTCAACTCTGTTTTGTCTTTTTCTTCTATTATCAGTTATCATTAGACTTTTCTCTACCAAGTAGTTGATTAGTATACTCTTTTTTTATTTTTTATTCAACTTCCCTTTTAGACTGGTCTCAACTCTTATCTAATCTAACAGCATAGTTCCTTATCAACAATAAACTTTTGACTATTTTCAAAAAGGAAAAAAAAAACAATAAACTTTTGACTAAATATAAGTCTTTTTTTTAAAAAAATTAAATAGTTTCTTTTTATTGTATTTAAAGTCATAACCTCAGGATCATTTAGTATATATTGATATGCTGGAGTTATTGCTCCATTTGACATCTCAATTTATATTTTCATCACTTTGTAAATATTTTTTATGATAAAATTACGTGAGAGTTTAATATATTCCTACTATATCAAAGAAAAATTGTCCTTTTAAAAAAGATCAAAATTATCAACAAGAAGAAATAAATCAATTACCAAAAATGCATCCATGAATAAAAGGTCATAGATTCATCGTAGCCCTATATTTTTCTAAAAATATGTGAGGGTTCAATTTTAGTTTGAGATTTATATCCATCATTGACCAACATAATTGAACATGGTAGACAGTTCAAACTTTAAAATCATTTTTGGTGCTAACCTCTAAGAGATTATAAGTTTGAATTTTTCCCGAAACTAAAAAAGATATTGTTTTTTGGGGGTGAAGTAATTGAGTAATTTATCCTTATTATTTCAGGAAATTGTCAACCATGTTCTCTTCACAACTTAACACTCAACCAAAGAATGACAGGGTTTCAAATTCATGGAATGACTGAATGGAATGTGACAATTAGCAACAATTGCATTTGTTATCAATCAAAAGTAAAACTTGATTGCACAGGATTTCAAACTACAGAAAGTATTGACCCTTCCATCTTAGCCATTTCTGGAACCCAATGTTTGGTCAATGATGGGCTCCCAATTTTCAATTCCAAACCCATTACCTTCACTTATGCACAAGACCCTCAATTTAATTTCGAGCCAATTTTTTCCCAAATTGTTTGTTCTTAA ATGGCTCTCTTGGCGAAGCTTTTCACAGCACTTCTTTTCGTCTCTCTTATTTCCAAAGGAAATTGTCAACCATGTTCTCTTCACAACTTAACACTCAACCAAAGAATGACAGGGTTTCAAATTCATGGAATGACTGAATGGAATGTGACAATTAGCAACAATTGCATTTGTTATCAATCAAAAGTAAAACTTGATTGCACAGGATTTCAAACTACAGAAAGTATTGACCCTTCCATCTTAGCCATTTCTGGAACCCAATGTTTGGTCAATGATGGGCTCCCAATTTTCAATTCCAAACCCATTACCTTCACTTATGCACAAGACCCTCAATTTAATTTCGAGCCAATTTTTTCCCAAATTGTTTGTTCTTAA ATGGCTCTCTTGGCGAAGCTTTTCACAGCACTTCTTTTCGTCTCTCTTATTTCCAAAGGAAATTGTCAACCATGTTCTCTTCACAACTTAACACTCAACCAAAGAATGACAGGGTTTCAAATTCATGGAATGACTGAATGGAATGTGACAATTAGCAACAATTGCATTTGTTATCAATCAAAAGTAAAACTTGATTGCACAGGATTTCAAACTACAGAAAGTATTGACCCTTCCATCTTAGCCATTTCTGGAACCCAATGTTTGGTCAATGATGGGCTCCCAATTTTCAATTCCAAACCCATTACCTTCACTTATGCACAAGACCCTCAATTTAATTTCGAGCCAATTTTTTCCCAAATTGTTTGTTCTTAA MALLAKLFTALLFVSLISKGNCQPCSLHNLTLNQRMTGFQIHGMTEWNVTISNNCICYQSKVKLDCTGFQTTESIDPSILAISGTQCLVNDGLPIFNSKPITFTYAQDPQFNFEPIFSQIVCS Homology
BLAST of Sed0018471 vs. NCBI nr
Match: XP_038881121.1 (uncharacterized protein At1g05835-like [Benincasa hispida]) HSP 1 Score: 194.9 bits (494), Expect = 4.1e-46 Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 0
BLAST of Sed0018471 vs. NCBI nr
Match: XP_022962948.1 (uncharacterized protein At1g05835-like [Cucurbita moschata]) HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44 Identity = 92/123 (74.80%), Postives = 104/123 (84.55%), Query Frame = 0
BLAST of Sed0018471 vs. NCBI nr
Match: KAG7026827.1 (hypothetical protein SDJN02_10834, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.1 bits (466), Expect = 7.2e-43 Identity = 90/123 (73.17%), Postives = 102/123 (82.93%), Query Frame = 0
BLAST of Sed0018471 vs. NCBI nr
Match: KAG7026828.1 (Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.1 bits (466), Expect = 7.2e-43 Identity = 87/123 (70.73%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Sed0018471 vs. NCBI nr
Match: XP_008440637.1 (PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo] >KAA0036281.1 protein TAPETUM DETERMINANT 1-like [Cucumis melo var. makuwa] >TYK12675.1 protein TAPETUM DETERMINANT 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 87/123 (70.73%), Postives = 102/123 (82.93%), Query Frame = 0
BLAST of Sed0018471 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 25/81 (30.86%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of Sed0018471 vs. ExPASy TrEMBL
Match: A0A6J1HGA0 (uncharacterized protein At1g05835-like OS=Cucurbita moschata OX=3662 GN=LOC111463301 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 92/123 (74.80%), Postives = 104/123 (84.55%), Query Frame = 0
BLAST of Sed0018471 vs. ExPASy TrEMBL
Match: A0A5D3CMA8 (Protein TAPETUM DETERMINANT 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002630 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.6e-42 Identity = 87/123 (70.73%), Postives = 102/123 (82.93%), Query Frame = 0
BLAST of Sed0018471 vs. ExPASy TrEMBL
Match: A0A1S3B1L8 (protein TAPETUM DETERMINANT 1-like OS=Cucumis melo OX=3656 GN=LOC103484995 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.6e-42 Identity = 87/123 (70.73%), Postives = 102/123 (82.93%), Query Frame = 0
BLAST of Sed0018471 vs. ExPASy TrEMBL
Match: A0A0A0KLZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.5e-41 Identity = 85/123 (69.11%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Sed0018471 vs. ExPASy TrEMBL
Match: A0A6J1KP98 (protein TAPETUM DETERMINANT 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497464 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.8e-40 Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 0
BLAST of Sed0018471 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14 Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 0
BLAST of Sed0018471 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein ) HSP 1 Score: 47.4 bits (111), Expect = 9.8e-06 Identity = 25/81 (30.86%), Postives = 43/81 (53.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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