Sed0018462 (gene) Chayote v1

Overview


Name	Sed0018462
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RNA-binding protein NOB1-like
Location	LG05: 6316088 .. 6320114 (+)
RNA-Seq Expression	Sed0018462
Synteny	Sed0018462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTATTCATTGCTCCAAGCTCTTCCGTTCATTCTGCCTCTTACTTTTTGCAGCCATGGAAAACCCTTCACCAGCTTCACAGTGGAGCAATGTCGTCAAATTTCAACCACCTCCAAAACCTCCGATTCAAACTCCGACCTCCGACGTCCAAGTATTCGCCGATAGCTGCAAGTCCAGCAAAGGCGTCGCCGTTGCCGTCATCGACGCCAACGCCATCATCCAAGGCGGAGACAAGCTCTCCACCTGCGCGGATAAGTTCGTTTCCGTTCCTGAGGTTTTGGATGAGATTCGCGATCCCGTGTCTCGCCACAGACTCGCCTTCGTTCCTTTCACGCTTGAAGCCATGGATCCTTCCCCTGAAGCTCTCAGTAAAGGTATTTTTTTGAATTCTAGGAATCTTATGTTTTTTTACGTGTTTATGTTTGTTTGATGGTGAAACGGTTGTTGTTCTGGGATGAATTTGAGACCAGTGTTTTATTGTTTCCCTTTTAACCAAACAGGCTTCACCCATGGATTTCTATGTTTGAAGCTAATCAAGATCCTTCTATGTGATTATAATGTTTTTTTGAAAGAAGGGTAACCACGCCCGTCTCTAGGCCAGACACCGGGAGACATCGAAAGAGTAATGTCACAGCTGAGGCTCTAACCTGGCTCCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAACCACCAGAGCCATCTCTTGGGGAACTATTTTGTCTTTATTGTTGCTTTCAAACCTTTGGTTCTCTTAATTTTAGATATTTTTTTCCTTTGTAAAATTCACCCACCCGGAGTGTAAGTATTAAGTTATCTTAATCATCGTGGGTTGGCTAAGTGGTTAAGAGGCTCTCAAGGAACCAAAACATAATGGGCTCAATCCATGACATAGTCGAGATGAGTCTAATAAGAATAGACTTTGTGCATCTAATAAGAATAGTCGAGGGGTGTCTATACTGGCTCAGACACACACGGATTCAAAAAGAAGTTCTCAACTTATGGCTTGCCCAAGTCCCTAGGGGGTGATAAGTGGTTGAAGACTTGAGCTTTGAAGGTATGCTCCCTTCAAAGTCTCGGGTTCGAGACTCACCTGCGACATCTCTTTTGATGTCTCCGGTGCCTGGCCTAGGGATGGGCATGCTTACTTTTGTTTAAGAAAAAAACTTATGGCTTGCCTAGGGCATTGGAGAGTACCCCCAAATTTATTTAGCTTTTACTACCAGGTACCCCTTGAATGAGAAATGTAACGCTTCAGGGGTACTTGTAAGTTGTAACTATGGGCCTATGGCCTTATTGGAAAGAGATGTGAGACATGAAAATTATAGTCTAGATGGTAACTTATTTAATTGGTTTTTAGTTTTTACCTAGTCGAGTACTATGACTCACCTATTATCGTTGGTGTTACTGTTGCATTTCTTGGCTTTCTTATGCATTTTCTGTCGAATCTTACAGTAATCAAGTTTGCAAAGGCAACCGGTGACTTACAGACTCTCTCAGATGTTGACATTAAACTTATTGCCCTCACTTATACGTTGGAGACTCAGATCCATGGGACCAAACATCTCCGCGAGTGTCCTCCCCCTGTCCACACGGTTAATGCAAAGAGGTTACCTGAGAAAGACATGCCTGGATGGGGCTCTAACGTTCCCAATCTGGAAGAATGGGAAGCATTAGAGCAAGATACCGATGTTCCGTCCAATTCCACTTCAAAGATCCTTCCTTTGCAGGATTTAAACCTGAACATCATCCCTTCAGATGGTCAATCTGAAGATCTTTCATTGGACCACAAGGATGAGAATAACTCTGAGCATCAAGATGAAATTGAGAGTAATTCAAGAAGAACAAGGAGATATCCTCCAAAGAAAAAGGAAATTAACCTCGAAGGGAAAGTGGTTGCTGAAGGAATTGATGCATCCCAGGGACAATATGATGATAATGAGGGTGACTGGACACCTGCTGTCAGTCGAAGTACTCAGAGAAGATATCTTCGGAGAAAATCCAGACGTGAATATTATGAGTCCTTAGCTGAAAAGGATAGTCAGCTAGATGTTAAAACCACAGATGGTGATATCCAAGTAGAAACTAACAGATCAGGTCAATCACAGGATCACGACAGTCAGATAGCGGAAGGGACCAACAACGAAAACCTCTCTGAAACTTTGAAGCACATGAGGCTGGAAGAAGATTCATTAAATGCTCTTCACACGGAAACGCTTGATGCCTCGACAAAAGAAGAGTCTGACAAAAGTGATGGAGAGGATGTTGTAGCTGTGGAGGGTATGAACGATACGGCAAAGGATGAGTTGGAACATTTAGAATACTCAAGTCAGACTAATGAAAGTGTAGACACATCAAATATAGATGATGTTAGTAGTGATCAGAGTTGGATGCTGAGATCATTGTCTGAATCAAGCGTAGCTTGTGTAACTGGCGACTTTGCAATGCAGAATGTTCTTTTGCAAATGGGATTACGTTTGTTGGCACCAGGAGGAATGCAGATCCGGCAACTACATAGGTATGTATATTTAGTTTTTGTTGTTTTTAATCAAATACCTTAGTAGTTTGTTTGAGATGAAAGCCATCAAGTAATGCAATTAATGTATCTCTCAGGTGGATTTTGAAATGTCATGCCTGCTACAACGTCACAGCTGAAACTGGAAAGATCTTTTGTCCAAAGTGTGGAAATGGCGGAACTTTGCGCAAGGTAGCTGTTACCGTTGGTGAGAATGGAGTCGTGTTATCTGCCCGTAAGCCAAGGATTATTCTGCGAGGCACAAAAGTGAGTATCTCTCCTCAAGTTGTTCATCAGAACAATACCCAATTTCATTATCTCTTTTATTTGTCTTTCTCAATGGTCATTTAGTTTGGGGATACTAACTTCAATATTTACTCTAAACACCATGTTAATCAGTGTCTTGTATTTTCCCAGCATGTTTGTATCAACTTCTTTTTAAACTTCTACATGTCTTAGCTAACCATCTTGAAATGCGCCTTTTCCTTTTCTTTTATGTATAGTTTTCACTTCCTATGCCGCAAGGTGGAAGGGATGCCATTACCAAGAATCTTGTTTTACGTGAAGATCAACTACCACAGAAGTTTCTTCATCCCAAGACCAAGAAGAAAGTCAATAAACAGGTTATTTTCAATTAAAATTGCATTGCTTTGTTTATCTTTATTCCAGTCCGTTCCTTTGGTATATTTGTAATTAGAATTGTGAAGACCTCATTTGATAACTATTTGTTTTTTGGTTTTCGAAATTTAAGCTTAGTTTTATTCAAATTTCCTACTTTGGTTTTTTGTTTTTGGTTTTTGAAATTTAAGCTTAATTTTATTCAAATTTCCTACTTTGGATTTTTGTTTTTGGTTTTTAAAATTTAAGCTTAATTTTATTCAAATTTCCTATCAAGTGTTCCATATTTTCTTAAGAAAGTATATAAATGTTAACCAAATTTCAAAAACCAAAACAAGCTTTTGAAAGGTACTTTTTTTTCCTCCAAAATTTTGTTTGATTTTTAAAAACATAGATAAGATGTAGATATCCAAGGAAGAACAAACATATAGTGAAATAATTGTTGTAGGCTTAAATTTTAAAAGCAAAAAACTAATAACAAAGTGGTTATCAAATCGGGTCCAAGTTATCACCTGAACTTGACGATGACCAAGCAAGTAATTTCCATTTTTCATGTTCAGGGAGATGAGTTCTTTGCAGTGGATGATTTCTTCGGCCACCATAATACTGATAAGAGAGCTCCTTTGCAGCCTCCTGTAAGGCAGGCTTTGGCAGTTTTCAGCGGCAAGAGAAATCCAAACGATAACCATTACTCCCGAGCCAAGCATTAGTAAACACAATGTTATTCTTTATGGAATTGATTTTCATTACTGTTTTCAGAGTTGCAAATTTTGATGAATATCTTATGTGGTGGATGAGTTAATGTATTCAATTATAAATTTCAGCTTACATGAGTGCAATTTTGTCCTTTATTATTTTCTTCAAATACTTGTTTGGTCTGCGTTTTATTCAC

mRNA sequence

TCAGTATTCATTGCTCCAAGCTCTTCCGTTCATTCTGCCTCTTACTTTTTGCAGCCATGGAAAACCCTTCACCAGCTTCACAGTGGAGCAATGTCGTCAAATTTCAACCACCTCCAAAACCTCCGATTCAAACTCCGACCTCCGACGTCCAAGTATTCGCCGATAGCTGCAAGTCCAGCAAAGGCGTCGCCGTTGCCGTCATCGACGCCAACGCCATCATCCAAGGCGGAGACAAGCTCTCCACCTGCGCGGATAAGTTCGTTTCCGTTCCTGAGGTTTTGGATGAGATTCGCGATCCCGTGTCTCGCCACAGACTCGCCTTCGTTCCTTTCACGCTTGAAGCCATGGATCCTTCCCCTGAAGCTCTCAGTAAAGTAATCAAGTTTGCAAAGGCAACCGGTGACTTACAGACTCTCTCAGATGTTGACATTAAACTTATTGCCCTCACTTATACGTTGGAGACTCAGATCCATGGGACCAAACATCTCCGCGAGTGTCCTCCCCCTGTCCACACGGTTAATGCAAAGAGGTTACCTGAGAAAGACATGCCTGGATGGGGCTCTAACGTTCCCAATCTGGAAGAATGGGAAGCATTAGAGCAAGATACCGATGTTCCGTCCAATTCCACTTCAAAGATCCTTCCTTTGCAGGATTTAAACCTGAACATCATCCCTTCAGATGGTCAATCTGAAGATCTTTCATTGGACCACAAGGATGAGAATAACTCTGAGCATCAAGATGAAATTGAGAGTAATTCAAGAAGAACAAGGAGATATCCTCCAAAGAAAAAGGAAATTAACCTCGAAGGGAAAGTGGTTGCTGAAGGAATTGATGCATCCCAGGGACAATATGATGATAATGAGGGTGACTGGACACCTGCTGTCAGTCGAAGTACTCAGAGAAGATATCTTCGGAGAAAATCCAGACGTGAATATTATGAGTCCTTAGCTGAAAAGGATAGTCAGCTAGATGTTAAAACCACAGATGGTGATATCCAAGTAGAAACTAACAGATCAGGTCAATCACAGGATCACGACAGTCAGATAGCGGAAGGGACCAACAACGAAAACCTCTCTGAAACTTTGAAGCACATGAGGCTGGAAGAAGATTCATTAAATGCTCTTCACACGGAAACGCTTGATGCCTCGACAAAAGAAGAGTCTGACAAAAGTGATGGAGAGGATGTTGTAGCTGTGGAGGGTATGAACGATACGGCAAAGGATGAGTTGGAACATTTAGAATACTCAAGTCAGACTAATGAAAGTGTAGACACATCAAATATAGATGATGTTAGTAGTGATCAGAGTTGGATGCTGAGATCATTGTCTGAATCAAGCGTAGCTTGTGTAACTGGCGACTTTGCAATGCAGAATGTTCTTTTGCAAATGGGATTACGTTTGTTGGCACCAGGAGGAATGCAGATCCGGCAACTACATAGGTGGATTTTGAAATGTCATGCCTGCTACAACGTCACAGCTGAAACTGGAAAGATCTTTTGTCCAAAGTGTGGAAATGGCGGAACTTTGCGCAAGGTAGCTGTTACCGTTGGTGAGAATGGAGTCGTGTTATCTGCCCGTAAGCCAAGGATTATTCTGCGAGGCACAAAATTTTCACTTCCTATGCCGCAAGGTGGAAGGGATGCCATTACCAAGAATCTTGTTTTACGTGAAGATCAACTACCACAGAAGTTTCTTCATCCCAAGACCAAGAAGAAAGTCAATAAACAGGGAGATGAGTTCTTTGCAGTGGATGATTTCTTCGGCCACCATAATACTGATAAGAGAGCTCCTTTGCAGCCTCCTGTAAGGCAGGCTTTGGCAGTTTTCAGCGGCAAGAGAAATCCAAACGATAACCATTACTCCCGAGCCAAGCATTAGTAAACACAATGTTATTCTTTATGGAATTGATTTTCATTACTGTTTTCAGAGTTGCAAATTTTGATGAATATCTTATGTGGTGGATGAGTTAATGTATTCAATTATAAATTTCAGCTTACATGAGTGCAATTTTGTCCTTTATTATTTTCTTCAAATACTTGTTTGGTCTGCGTTTTATTCAC

Coding sequence (CDS)

ATGGAAAACCCTTCACCAGCTTCACAGTGGAGCAATGTCGTCAAATTTCAACCACCTCCAAAACCTCCGATTCAAACTCCGACCTCCGACGTCCAAGTATTCGCCGATAGCTGCAAGTCCAGCAAAGGCGTCGCCGTTGCCGTCATCGACGCCAACGCCATCATCCAAGGCGGAGACAAGCTCTCCACCTGCGCGGATAAGTTCGTTTCCGTTCCTGAGGTTTTGGATGAGATTCGCGATCCCGTGTCTCGCCACAGACTCGCCTTCGTTCCTTTCACGCTTGAAGCCATGGATCCTTCCCCTGAAGCTCTCAGTAAAGTAATCAAGTTTGCAAAGGCAACCGGTGACTTACAGACTCTCTCAGATGTTGACATTAAACTTATTGCCCTCACTTATACGTTGGAGACTCAGATCCATGGGACCAAACATCTCCGCGAGTGTCCTCCCCCTGTCCACACGGTTAATGCAAAGAGGTTACCTGAGAAAGACATGCCTGGATGGGGCTCTAACGTTCCCAATCTGGAAGAATGGGAAGCATTAGAGCAAGATACCGATGTTCCGTCCAATTCCACTTCAAAGATCCTTCCTTTGCAGGATTTAAACCTGAACATCATCCCTTCAGATGGTCAATCTGAAGATCTTTCATTGGACCACAAGGATGAGAATAACTCTGAGCATCAAGATGAAATTGAGAGTAATTCAAGAAGAACAAGGAGATATCCTCCAAAGAAAAAGGAAATTAACCTCGAAGGGAAAGTGGTTGCTGAAGGAATTGATGCATCCCAGGGACAATATGATGATAATGAGGGTGACTGGACACCTGCTGTCAGTCGAAGTACTCAGAGAAGATATCTTCGGAGAAAATCCAGACGTGAATATTATGAGTCCTTAGCTGAAAAGGATAGTCAGCTAGATGTTAAAACCACAGATGGTGATATCCAAGTAGAAACTAACAGATCAGGTCAATCACAGGATCACGACAGTCAGATAGCGGAAGGGACCAACAACGAAAACCTCTCTGAAACTTTGAAGCACATGAGGCTGGAAGAAGATTCATTAAATGCTCTTCACACGGAAACGCTTGATGCCTCGACAAAAGAAGAGTCTGACAAAAGTGATGGAGAGGATGTTGTAGCTGTGGAGGGTATGAACGATACGGCAAAGGATGAGTTGGAACATTTAGAATACTCAAGTCAGACTAATGAAAGTGTAGACACATCAAATATAGATGATGTTAGTAGTGATCAGAGTTGGATGCTGAGATCATTGTCTGAATCAAGCGTAGCTTGTGTAACTGGCGACTTTGCAATGCAGAATGTTCTTTTGCAAATGGGATTACGTTTGTTGGCACCAGGAGGAATGCAGATCCGGCAACTACATAGGTGGATTTTGAAATGTCATGCCTGCTACAACGTCACAGCTGAAACTGGAAAGATCTTTTGTCCAAAGTGTGGAAATGGCGGAACTTTGCGCAAGGTAGCTGTTACCGTTGGTGAGAATGGAGTCGTGTTATCTGCCCGTAAGCCAAGGATTATTCTGCGAGGCACAAAATTTTCACTTCCTATGCCGCAAGGTGGAAGGGATGCCATTACCAAGAATCTTGTTTTACGTGAAGATCAACTACCACAGAAGTTTCTTCATCCCAAGACCAAGAAGAAAGTCAATAAACAGGGAGATGAGTTCTTTGCAGTGGATGATTTCTTCGGCCACCATAATACTGATAAGAGAGCTCCTTTGCAGCCTCCTGTAAGGCAGGCTTTGGCAGTTTTCAGCGGCAAGAGAAATCCAAACGATAACCATTACTCCCGAGCCAAGCATTAG

Protein sequence

MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDKLSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEALEQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRYPPKKKEINLEGKVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAEKDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTNNENLSETLKHMRLEEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSNIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALAVFSGKRNPNDNHYSRAKH

Homology

[Close]

BLAST of Sed0018462 vs. NCBI nr
Match: XP_023533425.1 (RNA-binding protein NOB1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533427.1 RNA-binding protein NOB1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1059.3 bits (2738), Expect = 1.3e-305
Identity = 542/618 (87.70%), Postives = 575/618 (93.04%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+PSPAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D P ++TSKILPLQDLNLNI+PSDGQSEDLSL+HKDE+NSEHQDE ES SRR+R+Y
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHQDETESGSRRSRKY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
           KDSQ DV+TTDGD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 301 KDSQQDVETTDGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 360

Query: 361 EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
           EEDSLNA H E LDAS KEE D S+ E++VAVEGMNDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 361 EEDSLNAFHMEGLDASKKEELDISEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDTSN 420

Query: 421 IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
           IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 421 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480

Query: 481 CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
           CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 481 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 540

Query: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
           AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALA 600

Query: 601 VFSGKRNPNDNHYSRAKH 607
           VFSGKRNPNDNHYSR+ H
Sbjct: 601 VFSGKRNPNDNHYSRSHH 618

[Close]

BLAST of Sed0018462 vs. NCBI nr
Match: XP_022957812.1 (RNA-binding protein NOB1-like [Cucurbita moschata])

HSP 1 Score: 1051.6 bits (2718), Expect = 2.6e-303
Identity = 538/618 (87.06%), Postives = 572/618 (92.56%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+P PAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPYPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D P ++TSKILPLQDLNLNI+PSDGQSEDLSL+HKDE+NSEH DE ES SRR+RRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHPDETESGSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
           KDSQ DV+TTDGD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 301 KDSQQDVETTDGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 360

Query: 361 EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
           EEDSLNA H E LDAS KEE D S+ E++VA EG+NDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 361 EEDSLNAFHMEGLDASKKEELDISEVENIVAAEGINDTAKDEMEHLEYSSQTNESVDTSN 420

Query: 421 IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
           IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 421 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480

Query: 481 CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
           CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 481 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 540

Query: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
           AITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQALA 600

Query: 601 VFSGKRNPNDNHYSRAKH 607
           VFSGKRNPNDNHYSR+ H
Sbjct: 601 VFSGKRNPNDNHYSRSHH 618

[Close]

BLAST of Sed0018462 vs. NCBI nr
Match: KAG6606105.1 (Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1051.6 bits (2718), Expect = 2.6e-303
Identity = 538/618 (87.06%), Postives = 572/618 (92.56%), Query Frame = 0


Query: 1    MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
            ME+P PAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 917  MESPYPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 976

Query: 61   LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
            LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 977  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 1036

Query: 121  SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
            SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 1037 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 1096

Query: 181  EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
            EQD D P ++TSKILPLQDLNLNI+PSDGQSEDLSL+HKDE+NSEH DE ES SRR+RRY
Sbjct: 1097 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHPDETESGSRRSRRY 1156

Query: 241  PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
            PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 1157 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 1216

Query: 301  KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
            KDSQ DV+TTDGD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 1217 KDSQQDVETTDGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 1276

Query: 361  EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
            EEDSLNA H E LDAS KEE D S+ E++VA EG+NDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 1277 EEDSLNAFHMEGLDASKKEELDISEVENIVAAEGINDTAKDEMEHLEYSSQTNESVDTSN 1336

Query: 421  IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
            IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 1337 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 1396

Query: 481  CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
            CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 1397 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 1456

Query: 541  AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
            AITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 1457 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQALA 1516

Query: 601  VFSGKRNPNDNHYSRAKH 607
            VFSGKRNPNDNHYSR+ H
Sbjct: 1517 VFSGKRNPNDNHYSRSHH 1534

[Close]

BLAST of Sed0018462 vs. NCBI nr
Match: KAG7036051.1 (Oxalate--CoA ligase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1050.4 bits (2715), Expect = 5.8e-303
Identity = 538/618 (87.06%), Postives = 572/618 (92.56%), Query Frame = 0


Query: 1    MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
            ME+PSPAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 849  MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 908

Query: 61   LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
            LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 909  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 968

Query: 121  SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
            SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 969  SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 1028

Query: 181  EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
            EQD D P ++TSKILPLQDLNLNI+PSDGQSEDLSL+HKDE+NSEHQDE ES SRR+RRY
Sbjct: 1029 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHQDETESGSRRSRRY 1088

Query: 241  PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
            PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 1089 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 1148

Query: 301  KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
            KDSQ DV+TTDGD+ VE NRSGQSQ+          +D QIAEGT NNENLSE L  MRL
Sbjct: 1149 KDSQQDVETTDGDVLVENNRSGQSQEQISEPISGNGNDGQIAEGTNNNENLSEILNQMRL 1208

Query: 361  EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
            EEDSLNA H E LDA  KEE D S+ E+ VA EG+NDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 1209 EEDSLNAFHMEGLDALKKEELDISEVENNVAAEGINDTAKDEMEHLEYSSQTNESVDTSN 1268

Query: 421  IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
            IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 1269 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 1328

Query: 481  CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
            CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 1329 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 1388

Query: 541  AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
            AITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 1389 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQALA 1448

Query: 601  VFSGKRNPNDNHYSRAKH 607
            VFSGKRNPNDNHYSR+ H
Sbjct: 1449 VFSGKRNPNDNHYSRSHH 1466

[Close]

BLAST of Sed0018462 vs. NCBI nr
Match: XP_022995199.1 (RNA-binding protein NOB1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1049.3 bits (2712), Expect = 1.3e-302
Identity = 537/618 (86.89%), Postives = 572/618 (92.56%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+PSPAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D P ++TSKILPLQDLNLNI+PS GQSEDLSL+HKDE+NSEHQDE ES SRR+RRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSGGQSEDLSLEHKDEHNSEHQDETESGSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
           KDSQ DV+TT+GD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 301 KDSQQDVETTEGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 360

Query: 361 EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
           EEDSLNA H E L A  KEE D S+ E++VAVEGMNDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 361 EEDSLNAFHMEGLGALKKEELDTSEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDTSN 420

Query: 421 IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
           IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 421 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480

Query: 481 CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
           CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 481 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 540

Query: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
           AITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQALA 600

Query: 601 VFSGKRNPNDNHYSRAKH 607
           VFSGKRNPNDNH+SR+ H
Sbjct: 601 VFSGKRNPNDNHFSRSHH 618

[Close]

BLAST of Sed0018462 vs. ExPASy Swiss-Prot
Match: Q9FLL1 (RNA-binding NOB1-like protein OS=Arabidopsis thaliana OX=3702 GN=NOB1 PE=1 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 1.1e-206
Identity = 377/614 (61.40%), Postives = 475/614 (77.36%), Query Frame = 0


Query: 3   NPSPASQWSNVVKFQPPPKPPIQT-PTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDKL 62
           +P P S WS++VK  PP KPP+     + +     +CKS+KG+++AV+DANAII+G   L
Sbjct: 2   DPKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSL 61

Query: 63  STCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTLS 122
           +  ADKFV+VPEVL EIRDP SR RLAF+PFT++ M+PSPE+LSKVIKFA+ATGDLQ+LS
Sbjct: 62  TNFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLS 121

Query: 123 DVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEALE 182
           DVD+KLIAL+YTLE Q++GTK+LR+ PPP+ TV  KRLPEKD+PGWGSNV NLEEWEALE
Sbjct: 122 DVDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALE 181

Query: 183 QDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRYP 242
            +T+  SN+ SKILPL+DLN+NII SD  SE  S+    EN   H+++++   ++ RRYP
Sbjct: 182 NETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTEN---HEEDVQEGGKKHRRYP 241

Query: 243 PKKKEINLEGKVVAEGIDASQGQYDDNE--GDWTPAVSRSTQRRYLRRKSRREYYESLAE 302
           PKK EI LEGK+V EG+DASQGQYDD++   DW PAVSRST  +YLRRK+R E+Y +LAE
Sbjct: 242 PKKTEIKLEGKMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAE 301

Query: 303 KDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTNNENLSETLKHMRLEEDSLNALHTE 362
           ++ Q   K  + D    T  + ++   DS    G N E++S  LK MRLEE+SL AL  E
Sbjct: 302 QEIQ---KDQEADKARHTKEANETHAKDS----GKNGEDISSILKDMRLEEESLRALQEE 361

Query: 363 TLDASTKEESDKSDGED------VVAVEGMNDTAKDELEHLEYSSQTNESVDTSNI-DDV 422
           T    T  E+   +GED       V  EG+ D A   LE+LE +S+  ++ + S+I DD 
Sbjct: 362 T--EETNAEATLINGEDDIDHDIEVEAEGI-DVANQALENLEIASEAEDTFEASSIGDDG 421

Query: 423 SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACYNV 482
           SS+QSW LR+LSESSVAC+TGD+AMQNV+LQMGLRLLAPGGMQIRQLHRWILKCHACY V
Sbjct: 422 SSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTV 481

Query: 483 TAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRDAITK 542
           T E G+IFCPKCGNGGTLRKVAVT+G NG +++A KPRI LRGT++S+PMP+GGR+AITK
Sbjct: 482 TPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIPMPKGGREAITK 541

Query: 543 NLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALAVFSG 602
           NL+LREDQLPQK LHP+TKKK +K GDE+F  DD F +H++D++APLQPPVR+A++VFS 
Sbjct: 542 NLILREDQLPQKLLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQPPVRKAMSVFSQ 601

Query: 603 KRNPNDNHYSRAKH 607
           KRNPNDNHYSR+ H
Sbjct: 602 KRNPNDNHYSRSMH 602

[Close]

BLAST of Sed0018462 vs. ExPASy Swiss-Prot
Match: Q6VEU1 (RNA-binding protein NOB1 OS=Rattus norvegicus OX=10116 GN=Nob1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-30
Identity = 139/558 (24.91%), Postives = 223/558 (39.96%), Query Frame = 0


Query: 48  VIDANAIIQGGDKLSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLRDA-PLQDIGKNIYTIREVVREIRDKATRRRLAVLPYELRFKEPFPEYVRLV 67

Query: 108 IKFAKATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGW 167
            +F+K TGD  +LS  DI+++ALTY LE +  G  HL++ P  V   ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKKEPEKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDTD-VPSNSTSKILPLQDLNL--NIIPS-DGQSEDLSLDHKDENN 227
           G ++P+  + +AL++  D  P    S+ L         N +P+ D + + L +D ++E  
Sbjct: 128 GFHLPS--KSKALQETVDHGPPADGSENLEFSSFMFWRNPLPNIDHELQQLLIDGREEEE 187

Query: 228 SEHQDEIESNSRRTRRYPPKKKEINLEGKVVAEGIDASQGQYDDNEGDW-TPAVSRSTQR 287
            E ++E              ++E  LE               DD+ G W TP+  +  Q 
Sbjct: 188 EEEEEE--------------EEEDELEDS-------------DDDGGGWITPSNIKQIQ- 247

Query: 288 RYLRRKSRREYYESLAEKDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTNNENLSET 347
                                                      H+S+             
Sbjct: 248 -------------------------------------------HESE------------- 307

Query: 348 LKHMRLEEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNE 407
                                                     D  KD             
Sbjct: 308 ----------------------------------------QCDIPKD------------- 367

Query: 408 SVDTSNIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRW 467
                                    V CVT DFAMQNVLLQMGL +LA  GM +R+   +
Sbjct: 368 -----------------------VQVGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARSY 400

Query: 468 ILKCHACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLS--ARKPRII-LRGTKFS 527
           IL+CH C+  T++  ++FC  CGN  TL+KV+VT+ ++G +    +R P+++  RG ++S
Sbjct: 428 ILRCHGCFKTTSDMNRVFCGHCGN-KTLKKVSVTINDDGTLHMHFSRNPKVLNPRGLRYS 400

Query: 528 LPMPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPL 587
           LP P+GG+ A+  +L   + + PQ  L  K ++K N    ++ A    F  ++   R+ +
Sbjct: 488 LPTPKGGKYAVNPHLT-EDQRFPQLRLSHKARQKTNVFAPDYIAGVSPFAENDISSRSAI 400

Query: 588 QPPVRQALAVFSGKRNPN 598
                  L     + NPN
Sbjct: 548 LQVRDSMLGAGRRRLNPN 400

[Close]

BLAST of Sed0018462 vs. ExPASy Swiss-Prot
Match: Q4R537 (RNA-binding protein NOB1 OS=Macaca fascicularis OX=9541 GN=NOB1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 7.2e-30
Identity = 137/559 (24.51%), Postives = 225/559 (40.25%), Query Frame = 0


Query: 48  VIDANAIIQGGDKLSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P P+ +  V
Sbjct: 8   VADAGAFLRDA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPQYVRLV 67

Query: 108 IKFAKATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGW 167
            +F+K TGD  +LS  DI+++ALTY LE +  G  HL++ P  V   ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDTDVPSNSTSKILPLQDLNL--NIIPS-DGQSEDLSLDHKDENNS 227
           G ++P+  +    E +   P+      L         N +PS D + ++L +D  ++  S
Sbjct: 128 GFHLPSKPK-SPQEAEKGHPACEPEN-LEFSSFMFWRNPLPSIDHELQELLIDRSEDVPS 187

Query: 228 EHQDEIESNSRRTRRYPPKKKEINLEGKVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRY 287
           + ++E E+                        G +  +   DD+ G W            
Sbjct: 188 KEEEEAEN------------------------GFEDRKDDSDDDGGGW------------ 247

Query: 288 LRRKSRREYYESLAEKDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTNNENLSETLK 347
           +   + ++  + L + D   DV+                                     
Sbjct: 248 ITPNNIKQIQQELEQCDVPKDVR------------------------------------- 307

Query: 348 HMRLEEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESV 407
                                                                       
Sbjct: 308 ------------------------------------------------------------ 367

Query: 408 DTSNIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWIL 467
                                  V CVT DFAMQNVLLQMGL +LA  GM IR+   +IL
Sbjct: 368 -----------------------VGCVTTDFAMQNVLLQMGLHVLAVNGMLIREARSYIL 402

Query: 468 KCHACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLS--ARKPRII-LRGTKFSLP 527
           +CH C+  T++  ++FC  CGN  TL+KV+VTV ++G +    +R P+++  RG ++SLP
Sbjct: 428 RCHGCFKTTSDMSRVFCAHCGN-KTLKKVSVTVSDDGALHMHFSRNPKVLNPRGLRYSLP 402

Query: 528 MPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFA-VDDFFGHHNTDKRAPLQ 587
            P+GG+ A+  +L   + + PQ  L  K ++K N    ++ A V  F  +  + + A LQ
Sbjct: 488 TPKGGKYAVNPHLT-EDQRFPQLRLSRKARQKTNVFAPDYIAGVSPFVENDVSSRSATLQ 402

Query: 588 PPVRQALAVFSGKRNPNDN 600
             VR +  + +G+R  N N
Sbjct: 548 --VRDS-TLGAGRRRLNPN 402

[Close]

BLAST of Sed0018462 vs. ExPASy Swiss-Prot
Match: Q9ULX3 (RNA-binding protein NOB1 OS=Homo sapiens OX=9606 GN=NOB1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 9.4e-30
Identity = 140/561 (24.96%), Postives = 226/561 (40.29%), Query Frame = 0


Query: 48  VIDANAIIQGGDKLSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLRHA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLV 67

Query: 108 IKFAKATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGW 167
            +F+K TGD  +LS  DI+++ALTY LE +  G  HL++ P  V   ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNL----EEWEALEQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENN 227
           G ++P      +E E      +  +   S  +  ++   NI   D + ++L +D  ++  
Sbjct: 128 GFHLPYKPKPPQETEKGHSACEPENLEFSSFMFWRNPLPNI---DHELQELLIDRGEDVP 187

Query: 228 SEHQDEIESNSRRTRRYPPKKKEINLEGKVVAEGIDASQGQYDDNEGDW-TPAVSRSTQR 287
           SE ++E E+                        G +  +   DD+ G W TP        
Sbjct: 188 SEEEEEEEN------------------------GFEDRKDDSDDDGGGWITP-------- 247

Query: 288 RYLRRKSRREYYESLAEKDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTNNENLSET 347
                                                              +N + + + 
Sbjct: 248 ---------------------------------------------------SNIKQIQQE 307

Query: 348 LKHMRLEEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNE 407
           L+   + ED                                                   
Sbjct: 308 LEQCDVPED--------------------------------------------------- 367

Query: 408 SVDTSNIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRW 467
                                    V C+T DFAMQNVLLQMGL +LA  GM IR+   +
Sbjct: 368 -----------------------VRVGCLTTDFAMQNVLLQMGLHVLAVNGMLIREARSY 402

Query: 468 ILKCHACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLS--ARKPRII-LRGTKFS 527
           IL+CH C+  T++  ++FC  CGN  TL+KV+VTV ++G +    +R P+++  RG ++S
Sbjct: 428 ILRCHGCFKTTSDMSRVFCSHCGN-KTLKKVSVTVSDDGTLHMHFSRNPKVLNPRGLRYS 402

Query: 528 LPMPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFA-VDDFFGHHNTDKRAP 587
           LP P+GG+ AI  +L   + + PQ  L  K ++K N    ++ A V  F  +  + + A 
Sbjct: 488 LPTPKGGKYAINPHLT-EDQRFPQLRLSQKARQKTNVFAPDYIAGVSPFVENDISSRSAT 402

Query: 588 LQPPVRQALAVFSGKRNPNDN 600
           LQ  VR +  + +G+R  N N
Sbjct: 548 LQ--VRDS-TLGAGRRRLNPN 402

[Close]

BLAST of Sed0018462 vs. ExPASy Swiss-Prot
Match: Q5RBB3 (RNA-binding protein NOB1 OS=Pongo abelii OX=9601 GN=NOB1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-29
Identity = 142/568 (25.00%), Postives = 227/568 (39.96%), Query Frame = 0


Query: 48  VIDANAIIQGGDKLSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKV 107
           V DA A ++    L        ++ EV+ EIRD  +R RLA +P+ L   +P PE +  V
Sbjct: 8   VADAGAFLRDA-ALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLV 67

Query: 108 IKFAKATGDLQTLSDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGW 167
            +F+K TGD  +LS  DI+++ALTY LE +  G  HL++ P  V   ++ + PE  +   
Sbjct: 68  TEFSKKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHIS 127

Query: 168 GSNVPNLEEWEALEQDTDVPSNSTSKILP-LQDLNL---------NIIPS-DGQSEDLSL 227
           G ++P+  +          P   T K  P  +  NL         N +P+ D + ++L +
Sbjct: 128 GFHLPSKPK----------PPQETEKGHPACEPENLEFSSFMFWRNPLPNIDHELQELLI 187

Query: 228 DHKDENNSEHQDEIESNSRRTRRYPPKKKEINLEGKVVAEGIDASQGQYDDNEGDW-TPA 287
           D  ++  S+ ++E                           G +  +   DD+ G W TP 
Sbjct: 188 DRGEDIPSDEEEE-------------------------ENGFEDRRDDSDDDGGGWITP- 247

Query: 288 VSRSTQRRYLRRKSRREYYESLAEKDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTN 347
                                                                     +N
Sbjct: 248 ----------------------------------------------------------SN 307

Query: 348 NENLSETLKHMRLEEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLE 407
            + + + L+   + ED                                            
Sbjct: 308 IKQIQQELEQCDVPED-------------------------------------------- 367

Query: 408 YSSQTNESVDTSNIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQ 467
                                           V CVT DFAMQNVLLQMGL +LA  GM 
Sbjct: 368 ------------------------------VRVGCVTTDFAMQNVLLQMGLHVLAVNGML 401

Query: 468 IRQLHRWILKCHACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLS--ARKPRII- 527
           IR+   +IL+CH C+  T++  ++FC  CGN  TL+KV+VTV ++G +    +R P+++ 
Sbjct: 428 IREARSYILRCHGCFKTTSDMSRVFCSHCGN-KTLKKVSVTVSDDGTLHMHFSRNPKVLN 401

Query: 528 LRGTKFSLPMPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFA-VDDFFGHH 587
            RG ++SLP P+GG+ AI  +L   + + PQ  L  K ++K N    ++ A V  F  + 
Sbjct: 488 PRGLRYSLPTPKGGKYAINPHLT-EDQRFPQLRLSRKARQKTNVFAPDYVAGVSPFVEND 401

Query: 588 NTDKRAPLQPPVRQALAVFSGKRNPNDN 600
            + + A LQ  VR + ++ +G+R  N N
Sbjct: 548 ISSRSATLQ--VRDS-SLGAGRRRLNPN 401

[Close]

BLAST of Sed0018462 vs. ExPASy TrEMBL
Match: A0A6J1H071 (RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111459243 PE=3 SV=1)

HSP 1 Score: 1051.6 bits (2718), Expect = 1.3e-303
Identity = 538/618 (87.06%), Postives = 572/618 (92.56%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+P PAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPYPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D P ++TSKILPLQDLNLNI+PSDGQSEDLSL+HKDE+NSEH DE ES SRR+RRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSDGQSEDLSLEHKDEHNSEHPDETESGSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
           KDSQ DV+TTDGD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 301 KDSQQDVETTDGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 360

Query: 361 EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
           EEDSLNA H E LDAS KEE D S+ E++VA EG+NDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 361 EEDSLNAFHMEGLDASKKEELDISEVENIVAAEGINDTAKDEMEHLEYSSQTNESVDTSN 420

Query: 421 IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
           IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 421 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480

Query: 481 CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
           CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 481 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 540

Query: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
           AITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQALA 600

Query: 601 VFSGKRNPNDNHYSRAKH 607
           VFSGKRNPNDNHYSR+ H
Sbjct: 601 VFSGKRNPNDNHYSRSHH 618

[Close]

BLAST of Sed0018462 vs. ExPASy TrEMBL
Match: A0A6J1K514 (RNA-binding protein NOB1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490817 PE=3 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 6.3e-303
Identity = 537/618 (86.89%), Postives = 572/618 (92.56%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+PSPAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D P ++TSKILPLQDLNLNI+PS GQSEDLSL+HKDE+NSEHQDE ES SRR+RRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSGGQSEDLSLEHKDEHNSEHQDETESGSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
           KDSQ DV+TT+GD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 301 KDSQQDVETTEGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 360

Query: 361 EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
           EEDSLNA H E L A  KEE D S+ E++VAVEGMNDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 361 EEDSLNAFHMEGLGALKKEELDTSEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDTSN 420

Query: 421 IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
           IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 421 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480

Query: 481 CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRD 540
           CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTKFSLP+PQGGRD
Sbjct: 481 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKFSLPLPQGGRD 540

Query: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALA 600
           AITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FFAVDDFF HHNTDKRAPLQPPVRQALA
Sbjct: 541 AITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFFAVDDFFSHHNTDKRAPLQPPVRQALA 600

Query: 601 VFSGKRNPNDNHYSRAKH 607
           VFSGKRNPNDNH+SR+ H
Sbjct: 601 VFSGKRNPNDNHFSRSHH 618

[Close]

BLAST of Sed0018462 vs. ExPASy TrEMBL
Match: A0A6J1K778 (RNA-binding protein NOB1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490817 PE=4 SV=1)

HSP 1 Score: 1035.0 bits (2675), Expect = 1.2e-298
Identity = 537/644 (83.39%), Postives = 572/644 (88.82%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+PSPAS WSNVVK QP PKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPAPKPQHQTPTSTVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPFTLE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFTLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKD+PGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDLPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D P ++TSKILPLQDLNLNI+PS GQSEDLSL+HKDE+NSEHQDE ES SRR+RRY
Sbjct: 181 EQDADAPLDTTSKILPLQDLNLNIVPSGGQSEDLSLEHKDEHNSEHQDETESGSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRYLRRK+RREYYE+LAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKARREYYEALAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD----------HDSQIAEGT-NNENLSETLKHMRL 360
           KDSQ DV+TT+GD+ VE NRSGQSQD          +D QIAEGT NNENLSE L  MRL
Sbjct: 301 KDSQQDVETTEGDVLVENNRSGQSQDQISEPITGNGNDCQIAEGTNNNENLSEILNQMRL 360

Query: 361 EEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTSN 420
           EEDSLNA H E L A  KEE D S+ E++VAVEGMNDTAKDE+EHLEYSSQTNESVDTSN
Sbjct: 361 EEDSLNAFHMEGLGALKKEELDTSEVENIVAVEGMNDTAKDEMEHLEYSSQTNESVDTSN 420

Query: 421 IDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480
           IDD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA
Sbjct: 421 IDDISSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHA 480

Query: 481 CYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTK----------- 540
           CYNVTAE GKIFCPKCGNGGTLRKVAVTVGENGVVL++RKPRI LRGTK           
Sbjct: 481 CYNVTAEIGKIFCPKCGNGGTLRKVAVTVGENGVVLASRKPRITLRGTKVVSLIVLSSRR 540

Query: 541 ---------------FSLPMPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFF 600
                          FSLP+PQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGD+FF
Sbjct: 541 ITNFVFKCAFSFYVQFSLPLPQGGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFF 600

Query: 601 AVDDFFGHHNTDKRAPLQPPVRQALAVFSGKRNPNDNHYSRAKH 607
           AVDDFF HHNTDKRAPLQPPVRQALAVFSGKRNPNDNH+SR+ H
Sbjct: 601 AVDDFFSHHNTDKRAPLQPPVRQALAVFSGKRNPNDNHFSRSHH 644

[Close]

BLAST of Sed0018462 vs. ExPASy TrEMBL
Match: A0A0A0KML5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154760 PE=3 SV=1)

HSP 1 Score: 1026.9 bits (2654), Expect = 3.3e-296
Identity = 531/619 (85.78%), Postives = 566/619 (91.44%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME PSPAS WSNVVK QP PKP  QTP+S VQVFADSCKSSKGVAVAV+DANAIIQGGDK
Sbjct: 1   METPSPASCWSNVVKTQPAPKPQHQTPSSSVQVFADSCKSSKGVAVAVVDANAIIQGGDK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LS+ ADKFVSVPEVLDEIRDPVSRHRLAFVPFTLE+MDPSP+AL+KVIKFA+ATGDLQTL
Sbjct: 61  LSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D PS  TSKILPLQDLNLNIIPSDGQSEDLSL+HKD++N EH DE ES+SRR+RRY
Sbjct: 181 EQDADDPSRLTSKILPLQDLNLNIIPSDGQSEDLSLEHKDDDNLEHLDETESDSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKKKEIN+EG K+VA+GIDASQGQYDDNEGDWTPAVSRSTQRRY RRK+RREYYESLAE
Sbjct: 241 PPKKKEINIEGKKMVADGIDASQGQYDDNEGDWTPAVSRSTQRRYHRRKARREYYESLAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD-----------HDSQIAEGT-NNENLSETLKHMR 360
           KDSQ DV+TT+GDI VE N SGQS+D           ++SQI EGT NNEN+SE LK MR
Sbjct: 301 KDSQQDVETTNGDIHVEFNGSGQSEDKISELPNTGNGNESQIGEGTNNNENISEILKQMR 360

Query: 361 LEEDSLNALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDTS 420
           LEEDSLNALH   + ASTKE SD+S+GE+ VAVEG  D  KDE+EH+E +SQTNESVD S
Sbjct: 361 LEEDSLNALH---MSASTKEGSDESEGENAVAVEGTKDAEKDEMEHMEDASQTNESVDMS 420

Query: 421 NIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480
           N+DDVSSDQSWMLRSLSESSVACVTGD+AMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH
Sbjct: 421 NVDDVSSDQSWMLRSLSESSVACVTGDYAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCH 480

Query: 481 ACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGR 540
           ACYNVTAE G+IFCPKCGNGGTLRKVAVTVGENGVVL+ARKPRI LRGTKFSLP+PQGGR
Sbjct: 481 ACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGR 540

Query: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQAL 600
           DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFF HHNTDKRAPLQPPVRQAL
Sbjct: 541 DAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQAL 600

Query: 601 AVFSGKRNPNDNHYSRAKH 607
           AVFSGKRNPNDNHYSR+KH
Sbjct: 601 AVFSGKRNPNDNHYSRSKH 616

[Close]

BLAST of Sed0018462 vs. ExPASy TrEMBL
Match: A0A6J1I202 (RNA-binding protein NOB1-like OS=Cucurbita maxima OX=3661 GN=LOC111469120 PE=3 SV=1)

HSP 1 Score: 1015.4 bits (2624), Expect = 1.0e-292
Identity = 525/620 (84.68%), Postives = 563/620 (90.81%), Query Frame = 0


Query: 1   MENPSPASQWSNVVKFQPPPKPPIQTPTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDK 60
           ME+PSPAS WSNVVK QPPPKP  QTPTS VQVFADSCKSS+GVAVAV+DANAIIQGG+K
Sbjct: 1   MESPSPASCWSNVVKSQPPPKPQHQTPTSSVQVFADSCKSSQGVAVAVVDANAIIQGGEK 60

Query: 61  LSTCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTL 120
           LSTCADKFVSVPEVLDE+RDPVSRHRLAFVPF+LE+MDPSPEAL+KVIKFA+ATGDLQTL
Sbjct: 61  LSTCADKFVSVPEVLDEVRDPVSRHRLAFVPFSLESMDPSPEALNKVIKFARATGDLQTL 120

Query: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEAL 180
           SDVDIKLIALTYTLETQIHGTKHLRECPPPVH VN KRLPEKDMPGWGSNVPNLEEWEAL
Sbjct: 121 SDVDIKLIALTYTLETQIHGTKHLRECPPPVHMVNTKRLPEKDMPGWGSNVPNLEEWEAL 180

Query: 181 EQDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRY 240
           EQD D PSNSTSKILPLQDLNLNIIPSDGQSEDLSL+  D N  EHQDE ES SRR+RRY
Sbjct: 181 EQDADAPSNSTSKILPLQDLNLNIIPSDGQSEDLSLEPNDGNYLEHQDETESGSRRSRRY 240

Query: 241 PPKKKEINLEG-KVVAEGIDASQGQYDDNEGDWTPAVSRSTQRRYLRRKSRREYYESLAE 300
           PPKK+EIN+ G K+VA+GIDASQGQ DDNEG+WTPAVSRSTQRRY+RRK+RREYYESLAE
Sbjct: 241 PPKKQEINIVGKKMVADGIDASQGQCDDNEGEWTPAVSRSTQRRYIRRKARREYYESLAE 300

Query: 301 KDSQLDVKTTDGDIQVETNRSGQSQD-----------HDSQIAEGT-NNENLSETLKHMR 360
           KD   DV+TTD DIQVE   SGQSQD           ++SQI EGT NNENLS+ LK MR
Sbjct: 301 KDGLQDVETTDADIQVEPKSSGQSQDKISELPNSGNWNESQIEEGTNNNENLSQILKQMR 360

Query: 361 LEEDSLN-ALHTETLDASTKEESDKSDGEDVVAVEGMNDTAKDELEHLEYSSQTNESVDT 420
           LEEDS+N ALH E L  STKEESD+ + ED VAVEG + T KDE+EH+E SSQTNESVDT
Sbjct: 361 LEEDSVNDALHVEGLGTSTKEESDEIEVEDAVAVEGTDYTVKDEMEHIEDSSQTNESVDT 420

Query: 421 SNIDDVSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480
           SN+DD+SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC
Sbjct: 421 SNVDDLSSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKC 480

Query: 481 HACYNVTAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGG 540
           HACYNVTAE G+IFCPKCGNGGTLRKVAVTVGENGVVL+ARKPRI LRGTKFSLP+PQGG
Sbjct: 481 HACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGG 540

Query: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQA 600
           RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGD+F+ VD+FF HHNTDKRAPLQPPVRQA
Sbjct: 541 RDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDDFYPVDNFFSHHNTDKRAPLQPPVRQA 600

Query: 601 LAVFSGKRNPNDNHYSRAKH 607
           LAVF+GKRNPNDNHYSR+KH
Sbjct: 601 LAVFNGKRNPNDNHYSRSKH 620

[Close]

BLAST of Sed0018462 vs. TAIR 10
Match: AT5G41190.1 (CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 721.1 bits (1860), Expect = 7.5e-208
Identity = 377/614 (61.40%), Postives = 475/614 (77.36%), Query Frame = 0


Query: 3   NPSPASQWSNVVKFQPPPKPPIQT-PTSDVQVFADSCKSSKGVAVAVIDANAIIQGGDKL 62
           +P P S WS++VK  PP KPP+     + +     +CKS+KG+++AV+DANAII+G   L
Sbjct: 2   DPKPTSMWSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSL 61

Query: 63  STCADKFVSVPEVLDEIRDPVSRHRLAFVPFTLEAMDPSPEALSKVIKFAKATGDLQTLS 122
           +  ADKFV+VPEVL EIRDP SR RLAF+PFT++ M+PSPE+LSKVIKFA+ATGDLQ+LS
Sbjct: 62  TNFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLS 121

Query: 123 DVDIKLIALTYTLETQIHGTKHLRECPPPVHTVNAKRLPEKDMPGWGSNVPNLEEWEALE 182
           DVD+KLIAL+YTLE Q++GTK+LR+ PPP+ TV  KRLPEKD+PGWGSNV NLEEWEALE
Sbjct: 122 DVDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALE 181

Query: 183 QDTDVPSNSTSKILPLQDLNLNIIPSDGQSEDLSLDHKDENNSEHQDEIESNSRRTRRYP 242
            +T+  SN+ SKILPL+DLN+NII SD  SE  S+    EN   H+++++   ++ RRYP
Sbjct: 182 NETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVSHTEN---HEEDVQEGGKKHRRYP 241

Query: 243 PKKKEINLEGKVVAEGIDASQGQYDDNE--GDWTPAVSRSTQRRYLRRKSRREYYESLAE 302
           PKK EI LEGK+V EG+DASQGQYDD++   DW PAVSRST  +YLRRK+R E+Y +LAE
Sbjct: 242 PKKTEIKLEGKMVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNALAE 301

Query: 303 KDSQLDVKTTDGDIQVETNRSGQSQDHDSQIAEGTNNENLSETLKHMRLEEDSLNALHTE 362
           ++ Q   K  + D    T  + ++   DS    G N E++S  LK MRLEE+SL AL  E
Sbjct: 302 QEIQ---KDQEADKARHTKEANETHAKDS----GKNGEDISSILKDMRLEEESLRALQEE 361

Query: 363 TLDASTKEESDKSDGED------VVAVEGMNDTAKDELEHLEYSSQTNESVDTSNI-DDV 422
           T    T  E+   +GED       V  EG+ D A   LE+LE +S+  ++ + S+I DD 
Sbjct: 362 T--EETNAEATLINGEDDIDHDIEVEAEGI-DVANQALENLEIASEAEDTFEASSIGDDG 421

Query: 423 SSDQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHRWILKCHACYNV 482
           SS+QSW LR+LSESSVAC+TGD+AMQNV+LQMGLRLLAPGGMQIRQLHRWILKCHACY V
Sbjct: 422 SSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTV 481

Query: 483 TAETGKIFCPKCGNGGTLRKVAVTVGENGVVLSARKPRIILRGTKFSLPMPQGGRDAITK 542
           T E G+IFCPKCGNGGTLRKVAVT+G NG +++A KPRI LRGT++S+PMP+GGR+AITK
Sbjct: 482 TPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRITLRGTQYSIPMPKGGREAITK 541

Query: 543 NLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFGHHNTDKRAPLQPPVRQALAVFSG 602
           NL+LREDQLPQK LHP+TKKK +K GDE+F  DD F +H++D++APLQPPVR+A++VFS 
Sbjct: 542 NLILREDQLPQKLLHPRTKKKASKPGDEYFVSDDVFLNHHSDRKAPLQPPVRKAMSVFSQ 601

Query: 603 KRNPNDNHYSRAKH 607
           KRNPNDNHYSR+ H
Sbjct: 602 KRNPNDNHYSRSMH 602

The following BLAST results are available for this feature:

BLAST of Sed0018462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533425.1	1.3e-305	87.70	RNA-binding protein NOB1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533...	[more]
XP_022957812.1	2.6e-303	87.06	RNA-binding protein NOB1-like [Cucurbita moschata]	[more]
KAG6606105.1	2.6e-303	87.06	Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036051.1	5.8e-303	87.06	Oxalate--CoA ligase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995199.1	1.3e-302	86.89	RNA-binding protein NOB1-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0018462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLL1	1.1e-206	61.40	RNA-binding NOB1-like protein OS=Arabidopsis thaliana OX=3702 GN=NOB1 PE=1 SV=1	[more]
Q6VEU1	1.5e-30	24.91	RNA-binding protein NOB1 OS=Rattus norvegicus OX=10116 GN=Nob1 PE=2 SV=1	[more]
Q4R537	7.2e-30	24.51	RNA-binding protein NOB1 OS=Macaca fascicularis OX=9541 GN=NOB1 PE=2 SV=1	[more]
Q9ULX3	9.4e-30	24.96	RNA-binding protein NOB1 OS=Homo sapiens OX=9606 GN=NOB1 PE=1 SV=1	[more]
Q5RBB3	1.6e-29	25.00	RNA-binding protein NOB1 OS=Pongo abelii OX=9601 GN=NOB1 PE=2 SV=1	[more]

BLAST of Sed0018462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H071	1.3e-303	87.06	RNA-binding protein NOB1-like OS=Cucurbita moschata OX=3662 GN=LOC111459243 PE=3...	[more]
A0A6J1K514	6.3e-303	86.89	RNA-binding protein NOB1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1K778	1.2e-298	83.39	RNA-binding protein NOB1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0KML5	3.3e-296	85.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154760 PE=3 SV=1	[more]
A0A6J1I202	1.0e-292	84.68	RNA-binding protein NOB1-like OS=Cucurbita maxima OX=3661 GN=LOC111469120 PE=3 S...	[more]

BLAST of Sed0018462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41190.1	7.5e-208	61.40	CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR0...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1010		coord: 5..55 e-value: 3.0E-9 score: 38.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..148
None	No IPR available	PANTHER	PTHR12814:SF3	SUBFAMILY NOT NAMED	coord: 8..508
IPR014881	Nin one binding (NOB1) Zn-ribbon-like	PFAM	PF08772	NOB1_Zn_bind	coord: 358..428 e-value: 3.4E-23 score: 81.6
IPR036283	NOB1 zinc finger-like superfamily	GENE3D	6.20.210.10		coord: 352..427 e-value: 4.7E-22 score: 79.6
IPR036283	NOB1 zinc finger-like superfamily	SUPERFAMILY	144206	NOB1 zinc finger-like	coord: 358..421
IPR017117	Ribonuclease Nob1, eukaryote	PIRSF	PIRSF037125	Nob1	coord: 6..508 e-value: 4.6E-103 score: 343.5
IPR033411	Ribonuclease, PIN domain	PFAM	PF17146	PIN_6	coord: 8..36 e-value: 1.9E-7 score: 31.4
IPR039907	RNA-binding protein NOB1	PANTHER	PTHR12814	RNA-BINDING PROTEIN NOB1	coord: 8..508

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018462.1	Sed0018462.1	mRNA
Sed0018462.2	Sed0018462.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0009553	embryo sac development
biological_process	GO:0030490	maturation of SSU-rRNA
biological_process	GO:0009555	pollen development
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0042274	ribosomal small subunit biogenesis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030688	preribosome, small subunit precursor
molecular_function	GO:0004521	endoribonuclease activity
molecular_function	GO:0046872	metal ion binding