Sed0018460 (gene) Chayote v1

Overview


Name	Sed0018460
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CDT1-like protein b
Location	LG01: 71286979 .. 71291240 (+)
RNA-Seq Expression	Sed0018460
Synteny	Sed0018460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGCCCACGTTCTCCGAGATCAAACGGAATCTCATCTAGCATACCGAAGGGCTAGGCAAATTCAGTTTTCCAAACAAAGGCAAAAGAAATTTGGCGGGAACCAACGCTCAACTCATGCAATAGCAGATAAACCAGCTACCCTAATCCAGTTCCCAAACAATCCAGTACATTTTTCGCGGGAAGAAACGTACTGTTTTGGCGGGAGTACACGTGGCAGGCTGATACAGCAGCTCTAGCTCTCATTCCCGCCAAAATGCATTCCATATATAAACCCTAAGATTTCATACCCTAAAATCAGCAATTCTTCTGCGTCCGACGTTTCCCCTTTCTTCAATCGGAGATCTCTTACAATCGGCAACGATGGACGTTTCAGAGAAGACGAATTCTTCATCTTTTCCTTTCAGATCGAAGAAAACCTTGCGCTCCAACTCTAAATCCTTACCTGAGGATCAGCCAGTACAGCCATTATCCTCCAAGACGCCGGAGAAGGCCGCGGCGCTACCTACTAAAGCTCGGGGCCGGAAGGTTGTGCATTCGATCAAAGGCGTTCGGCGAGCTGCCGAGAGCGTTCATGGATCTAATCGGCAGCAGCAGCAGCTTCTTGATCGGACTACTGAACGGAGTAGATCGGTTAGAAGGAAGTTAGATTCGTTGCAGAATACAAGTTCATCTAGTAGATCTAAGCCTTCCGTTGATAATTCTAAGATTTTGTCTGAGAAGTACGACTTTTTGTTCTTGATCTTGAATTTGGCTAATTGATTCATGGCTGTCTTTAGATCTACTTTGAATACTTTGAATGTTTGGTGGATGAGTGCTGTTGCTTTGGTGTTTGCAGATTTGAGATTCTGAGCAAGTTTTTTGATAGCTTGGACTCTGCTATGCGGTTGTTACGATTTAAAGGCGTGGCTTCTAATTTTTCTAATGTATGCCCCAAGATCGAAGTGCTCACTGATAGGTACTTGTTTTATTTATTGCCTCTTGCATTCATCAATTTATGTTTTGATACTGCTTATTAATGTAGTATTGTGAGAAGTACCTTGAATTATGAGTTCCGTTATTGTCTCAAGTTTTATAAAACTGCAAGTTTGTGATGATAGTTAGTTAAGAACAACATAGAATATGTACCTTGGTCTAAATGCATGCTGTTTTGTGTAGTGAAATTATGTTTATCCTAATGTAGGATGTTGAGCACCATTATAATGAGTACTTTTGTTGGCTGTTTTTAGATCCTTCCAGTTTTACTTTAATCTATTGGCATTTACTAAGTGGAGCATCTTTAGACTTTTTGTTTGTGTTTTGTAATTCTGGATATAATGTCTATGGGTGCAGGAGGTTTTCATATGGTCATTTGGCCCAATTGAAGTTTATTTTACCTGAAGCAATTGAGCTTAAGAAGGTTCATATAGTTGATGAACGAACCAGTTGCTCGAAGCCAGATCTTCACATATCTTTCAATTTTAGCGTTCTAGATAATCAAGATGACCTTGATTTAGGGGACCGGAATATGCAATTGAGGAAGTTGTTTAAGGCACGACTCTTAGAATTTGTCAATTCACATCCAGAGGTATGGATTTTTCTTTAGTGAATTGTAGGTGTAGAATTTATTCGTATGAAATTTTTCTTTCGTGAATTGTAGATGTAGAATTTATTTGTATTTGTGGCCATGAATCTTAGAATGTTGACCCTCTTCATATAGACACTAGTCTTAAATTTGATAACTCAGGGGCCCTTTTTATTATTACTACTAGCTCTTCGAGTTGGTATAGAATGGCTTTAAACAAGATGCATAGTTGGAGTTAGTCTTAAATTTTATTTTCTCTTTTAATTTGGAAGTCTTGTATTTTTAGTAGCATTTGTGTACCGTTCTTTCACACCTTTTGTGATCTAAGACATGTTTCTGTATTTAGATTGATGACGTTCCAAAAGATTTGTTGCCGAAGCCATTCAATTTCCCAAGCCAAGACAATATTGTACAAACCAACACTCCGGCAATATCATCAACAACAAACGTTATAGAAGAAATTCCCTTTAACCATCATCCGGAAGAAAGTCAAGGCTTCCGTATAGTTAAATCTATGGTACCGATGATGGCTACTAGCTCGAGTATACAGAAGGAATTTATAGGGGCATCCCATTTTTCACAATCTCTTAGCCGGCGTTTCTCTCGAAAAGTAGTTAACAGAGAAACTGAGAGTACTGACCTAGCCACAAAGCTGTGTGTCCAAAGTTCATCTCATTCTGATGTTGAGACAATTATTGATACAAACATTTATAATGCAGTATCTTCATCCAAGCTTTTCTCCCCAGTTAAACTCCCTTCCAACCCAACCTACAATTCAAGTTGTTTGGACAACTATGCTTCTCCAATTCGTTCTTCATCACTGCCACTTCCCACAACTCCCAGTAATATGGCTGATAGAGTAACCATGACAAAGGAGGGAGATGTAGTATCTGCAAAAACTAGCGATATTAATTCCACTCCAGCGAAACTGGTTTCAACTCCGGCTAGGCTAATGGCTTCGACGCCTGCAATGCGTCCACCGAAAAGAAGTTCAATGAGTCCCGAAGAAGATTCATCTTTCTCTACTAACAAGTTGATTAGGCGACCGCCTCGCTCTCGATCACTTGTATTTGACACTCCCACGAAGGAAGATAAAAATGAGGATGAAATAGATGGTACAAGTAGGGCATCATTTGGAGATGATCTTTTAGGTGTGCTACCTCTGAGCCTTCTGCAATCGGTAAGACCATTTTCTGCTTTATATGCAACTCCCTTTCATTGTTCTGTTTTAAGAAAACACTGAACTGTAATACATTTTCTGAATTTCTCATGTTCTCAATTTGCAGATTAGAGAGAAAGAAATTAAGGCGAAAGAAGAGCAATCGCCAGCAATATCACAAGCTAAGAGACGAAAGAAGATGATTTCCAATCTGCCGAAACTCTTCGATGCTATATTTTTCTTGTTCCACAAGCGTACAGTTATCACAAAGGAGGAGCTAATATACAAATTAGTAGTTGGCAATGCGGAAATTGTTGACAAAAGTAAGTTAATAACGCCGCACATATTATGAATAGATTCAAATTTGTTGTAGCTTGTCTGTAGCTGATTCATTTCTTTTGGTACACTTGTGTAGGAGAAATTGAAGAGCAGCTAGATTTGTTGCAAGAATTAGTCCCTGAGTGGATTTCTGAGAAGTTGGCATCCAGTGATGATGTGCTTGTATGGTGAGCATTTCTAACAACTCTTATTCTAAATATATAGTTCTAGAAAGCCACCCATTTGATATAACTGTTTCAAAATAACATCCGCTTATACCCAAACATATTAAATTTCCTGAGAAGGCTTAATTCAAATCCTATTTGTTTTCTGCAGCATTGAGAAATTGTCAAGTGCCTCAACGGTACGTGCTCGGCTTGAAGAAGCCAAGTGAAGAACAGTTCATAGTTATAGAAGAACTCGTTTACGCCCGTGAATGGGTCCACCTTTTTTCTCAGCATCTAATCTCGTCATAGTGGTCACAATCCTAATGGGCAAGCTCGAAGTCTCTGTAATGTAAATTAACATAAATGAAGAATACCAAAGCCCTAATTGAATGAGAGCATTTTTTCTGTTTCAGGTAAATATTAAGTTACATCTCTTGTATCACGATTGATTCACTGCCCTTATTCCTTAGTGTCACCTTATTCTGTCAATGTCTCAGTGGATATATAATAGATATTAACCAAAATTCCTTCCACAGTTAATATCATTGTCTTTCTTATTATGTTTAATCATCTGGAGCATTATAATTCAAATAAACAAATCAAATTTGTAGTTCGACTCTTCTGTGTATTGAAAACGTTTTGAGAATTTTGTATGTCGAACCCCAACCCCAAAACCAAGACAAGATTATAATGTTGTTCATTGCAACAATTTGAAGTTATGAGACGTAGATGCAAAAACTACTTGTAATCATCGCTTTCTTTTGGCTCATTAGTTTTGTAGCAAAGCAAACAAATATCCATATGATTAAACTATAAGAACAATTGGATGAAATTTATTAGAGTTTCTTAAATGGATTCGTACAAAATTGGCGCAGTCATTGTATATCTCCAATGAATTACTATATGGTGTTTAAATCAACATATATTAACGACTAATTTATACCAATCTGAAATGTAGCTATCAATCTCTCTCGGTCACAGCTCATGAAGAATCCTATGAAGTTTTGGAAGTTTACTCCAATTGATATGAACAAGAAGATAAGACAGGTAAAAAAA

mRNA sequence

CTGGCCCACGTTCTCCGAGATCAAACGGAATCTCATCTAGCATACCGAAGGGCTAGGCAAATTCAGTTTTCCAAACAAAGGCAAAAGAAATTTGGCGGGAACCAACGCTCAACTCATGCAATAGCAGATAAACCAGCTACCCTAATCCAGTTCCCAAACAATCCAGTACATTTTTCGCGGGAAGAAACGTACTGTTTTGGCGGGAGTACACGTGGCAGGCTGATACAGCAGCTCTAGCTCTCATTCCCGCCAAAATGCATTCCATATATAAACCCTAAGATTTCATACCCTAAAATCAGCAATTCTTCTGCGTCCGACGTTTCCCCTTTCTTCAATCGGAGATCTCTTACAATCGGCAACGATGGACGTTTCAGAGAAGACGAATTCTTCATCTTTTCCTTTCAGATCGAAGAAAACCTTGCGCTCCAACTCTAAATCCTTACCTGAGGATCAGCCAGTACAGCCATTATCCTCCAAGACGCCGGAGAAGGCCGCGGCGCTACCTACTAAAGCTCGGGGCCGGAAGGTTGTGCATTCGATCAAAGGCGTTCGGCGAGCTGCCGAGAGCGTTCATGGATCTAATCGGCAGCAGCAGCAGCTTCTTGATCGGACTACTGAACGGAGTAGATCGGTTAGAAGGAAGTTAGATTCGTTGCAGAATACAAGTTCATCTAGTAGATCTAAGCCTTCCGTTGATAATTCTAAGATTTTGTCTGAGAAATTTGAGATTCTGAGCAAGTTTTTTGATAGCTTGGACTCTGCTATGCGGTTGTTACGATTTAAAGGCGTGGCTTCTAATTTTTCTAATGTATGCCCCAAGATCGAAGTGCTCACTGATAGGAGGTTTTCATATGGTCATTTGGCCCAATTGAAGTTTATTTTACCTGAAGCAATTGAGCTTAAGAAGGTTCATATAGTTGATGAACGAACCAGTTGCTCGAAGCCAGATCTTCACATATCTTTCAATTTTAGCGTTCTAGATAATCAAGATGACCTTGATTTAGGGGACCGGAATATGCAATTGAGGAAGTTGTTTAAGGCACGACTCTTAGAATTTGTCAATTCACATCCAGAGATTGATGACGTTCCAAAAGATTTGTTGCCGAAGCCATTCAATTTCCCAAGCCAAGACAATATTGTACAAACCAACACTCCGGCAATATCATCAACAACAAACGTTATAGAAGAAATTCCCTTTAACCATCATCCGGAAGAAAGTCAAGGCTTCCGTATAGTTAAATCTATGGTACCGATGATGGCTACTAGCTCGAGTATACAGAAGGAATTTATAGGGGCATCCCATTTTTCACAATCTCTTAGCCGGCGTTTCTCTCGAAAAGTAGTTAACAGAGAAACTGAGAGTACTGACCTAGCCACAAAGCTGTGTGTCCAAAGTTCATCTCATTCTGATGTTGAGACAATTATTGATACAAACATTTATAATGCAGTATCTTCATCCAAGCTTTTCTCCCCAGTTAAACTCCCTTCCAACCCAACCTACAATTCAAGTTGTTTGGACAACTATGCTTCTCCAATTCGTTCTTCATCACTGCCACTTCCCACAACTCCCAGTAATATGGCTGATAGAGTAACCATGACAAAGGAGGGAGATGTAGTATCTGCAAAAACTAGCGATATTAATTCCACTCCAGCGAAACTGGTTTCAACTCCGGCTAGGCTAATGGCTTCGACGCCTGCAATGCGTCCACCGAAAAGAAGTTCAATGAGTCCCGAAGAAGATTCATCTTTCTCTACTAACAAGTTGATTAGGCGACCGCCTCGCTCTCGATCACTTGTATTTGACACTCCCACGAAGGAAGATAAAAATGAGGATGAAATAGATGGTACAAGTAGGGCATCATTTGGAGATGATCTTTTAGGTGTGCTACCTCTGAGCCTTCTGCAATCGATTAGAGAGAAAGAAATTAAGGCGAAAGAAGAGCAATCGCCAGCAATATCACAAGCTAAGAGACGAAAGAAGATGATTTCCAATCTGCCGAAACTCTTCGATGCTATATTTTTCTTGTTCCACAAGCGTACAGTTATCACAAAGGAGGAGCTAATATACAAATTAGTAGTTGGCAATGCGGAAATTGTTGACAAAAGAGAAATTGAAGAGCAGCTAGATTTGTTGCAAGAATTAGTCCCTGAGTGGATTTCTGAGAAGTTGGCATCCAGTGATGATGTGCTTGTATGCATTGAGAAATTGTCAAGTGCCTCAACGGTACGTGCTCGGCTTGAAGAAGCCAAGTGAAGAACAGTTCATAGTTATAGAAGAACTCGTTTACGCCCGTGAATGGGTCCACCTTTTTTCTCAGCATCTAATCTCGTCATAGTGGTCACAATCCTAATGGGCAAGCTCGAAGTCTCTGTAATGTAAATTAACATAAATGAAGAATACCAAAGCCCTAATTGAATGAGAGCATTTTTTCTGTTTCAGCTATCAATCTCTCTCGGTCACAGCTCATGAAGAATCCTATGAAGTTTTGGAAGTTTACTCCAATTGATATGAACAAGAAGATAAGACAGGTAAAAAAA

Coding sequence (CDS)

ATGGACGTTTCAGAGAAGACGAATTCTTCATCTTTTCCTTTCAGATCGAAGAAAACCTTGCGCTCCAACTCTAAATCCTTACCTGAGGATCAGCCAGTACAGCCATTATCCTCCAAGACGCCGGAGAAGGCCGCGGCGCTACCTACTAAAGCTCGGGGCCGGAAGGTTGTGCATTCGATCAAAGGCGTTCGGCGAGCTGCCGAGAGCGTTCATGGATCTAATCGGCAGCAGCAGCAGCTTCTTGATCGGACTACTGAACGGAGTAGATCGGTTAGAAGGAAGTTAGATTCGTTGCAGAATACAAGTTCATCTAGTAGATCTAAGCCTTCCGTTGATAATTCTAAGATTTTGTCTGAGAAATTTGAGATTCTGAGCAAGTTTTTTGATAGCTTGGACTCTGCTATGCGGTTGTTACGATTTAAAGGCGTGGCTTCTAATTTTTCTAATGTATGCCCCAAGATCGAAGTGCTCACTGATAGGAGGTTTTCATATGGTCATTTGGCCCAATTGAAGTTTATTTTACCTGAAGCAATTGAGCTTAAGAAGGTTCATATAGTTGATGAACGAACCAGTTGCTCGAAGCCAGATCTTCACATATCTTTCAATTTTAGCGTTCTAGATAATCAAGATGACCTTGATTTAGGGGACCGGAATATGCAATTGAGGAAGTTGTTTAAGGCACGACTCTTAGAATTTGTCAATTCACATCCAGAGATTGATGACGTTCCAAAAGATTTGTTGCCGAAGCCATTCAATTTCCCAAGCCAAGACAATATTGTACAAACCAACACTCCGGCAATATCATCAACAACAAACGTTATAGAAGAAATTCCCTTTAACCATCATCCGGAAGAAAGTCAAGGCTTCCGTATAGTTAAATCTATGGTACCGATGATGGCTACTAGCTCGAGTATACAGAAGGAATTTATAGGGGCATCCCATTTTTCACAATCTCTTAGCCGGCGTTTCTCTCGAAAAGTAGTTAACAGAGAAACTGAGAGTACTGACCTAGCCACAAAGCTGTGTGTCCAAAGTTCATCTCATTCTGATGTTGAGACAATTATTGATACAAACATTTATAATGCAGTATCTTCATCCAAGCTTTTCTCCCCAGTTAAACTCCCTTCCAACCCAACCTACAATTCAAGTTGTTTGGACAACTATGCTTCTCCAATTCGTTCTTCATCACTGCCACTTCCCACAACTCCCAGTAATATGGCTGATAGAGTAACCATGACAAAGGAGGGAGATGTAGTATCTGCAAAAACTAGCGATATTAATTCCACTCCAGCGAAACTGGTTTCAACTCCGGCTAGGCTAATGGCTTCGACGCCTGCAATGCGTCCACCGAAAAGAAGTTCAATGAGTCCCGAAGAAGATTCATCTTTCTCTACTAACAAGTTGATTAGGCGACCGCCTCGCTCTCGATCACTTGTATTTGACACTCCCACGAAGGAAGATAAAAATGAGGATGAAATAGATGGTACAAGTAGGGCATCATTTGGAGATGATCTTTTAGGTGTGCTACCTCTGAGCCTTCTGCAATCGATTAGAGAGAAAGAAATTAAGGCGAAAGAAGAGCAATCGCCAGCAATATCACAAGCTAAGAGACGAAAGAAGATGATTTCCAATCTGCCGAAACTCTTCGATGCTATATTTTTCTTGTTCCACAAGCGTACAGTTATCACAAAGGAGGAGCTAATATACAAATTAGTAGTTGGCAATGCGGAAATTGTTGACAAAAGAGAAATTGAAGAGCAGCTAGATTTGTTGCAAGAATTAGTCCCTGAGTGGATTTCTGAGAAGTTGGCATCCAGTGATGATGTGCTTGTATGCATTGAGAAATTGTCAAGTGCCTCAACGGTACGTGCTCGGCTTGAAGAAGCCAAGTGA

Protein sequence

MDVSEKTNSSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVHSIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILSEKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAIELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPEIDDVPKDLLPKPFNFPSQDNIVQTNTPAISSTTNVIEEIPFNHHPEESQGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSPEEDSSFSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKREIEEQLDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK

Homology

[Close]

BLAST of Sed0018460 vs. NCBI nr
Match: XP_023553630.1 (CDT1-like protein b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 763.5 bits (1970), Expect = 1.5e-216
Identity = 454/643 (70.61%), Postives = 508/643 (79.00%), Query Frame = 0


Query: 1   MDVSEKTN--SSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVH 60
           MD SEK +  SSS PF+SKKTLRSNSKSL +DQ  Q LSSKTPEK A L T+ R RKVV 
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQ--QSLSSKTPEKPAELTTRTRSRKVVL 60

Query: 61  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 120
           SIK VRRAAESV  SNRQ  +  D TTE S+SVRR++DS  N S SSR K SVD SK L 
Sbjct: 61  SIKEVRRAAESVRESNRQLPR--DLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKSKKLP 120

Query: 121 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 180
           EKFE LSKFFDSLDS MRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQ+KFI+PEAI
Sbjct: 121 EKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIVPEAI 180

Query: 181 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 240
           ELKKV I DERTSC KPDLHISFNFSVLD +DDL+ G++ MQLRKLFKARL EF +SHPE
Sbjct: 181 ELKKVMIFDERTSCMKPDLHISFNFSVLDYKDDLETGNQYMQLRKLFKARLSEFASSHPE 240

Query: 241 IDDVPKDLLPKPFNFPSQDNIVQTNTPAISSTTNVIEEIPFNH----------HPEESQG 300
           IDDVPKDLLPKPFN  SQD   +TN   +SS    IE++              H  E+QG
Sbjct: 241 IDDVPKDLLPKPFNCSSQDLFPKTN--FLSSVKAPIEQLAAEQPAISSSVAEDHSNENQG 300

Query: 301 FRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSH 360
           FRI+KS   M  T  S QKE IG SHFS S +RRFS+K VNRETE T  A K   Q    
Sbjct: 301 FRIIKS--TMTVTGPSKQKELIGLSHFSPSFTRRFSQK-VNRETEKTGQAAKRSDQIPFC 360

Query: 361 SDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMAD 420
           SD ET ++T      SSS  FSPVKLPSN T NS+C +NYASP+RSS+LPLPTTPSNMA 
Sbjct: 361 SDAETKVETE-----SSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTPSNMAA 420

Query: 421 RVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSP-EEDSSFSTNK 480
           RV +T E D  +AKTSDI STPAKLVSTPARLMASTPAM PPKRSSMSP ++DSS S NK
Sbjct: 421 RVALTNEDD-PTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSSRSANK 480

Query: 481 LIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEIKAKEE 540
           L+RRPPRSRSLVFDTPTKEDKN+D+ D T  AS  DD+L +LP SL+QSIREKE K KEE
Sbjct: 481 LVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKERKIKEE 540

Query: 541 QSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKREIEEQ 600
           Q PAISQAKRR+KMI++LPKLF+AIFFLFHKRTVIT+EELIYK++VGN +IVDK+EIEEQ
Sbjct: 541 QMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKKEIEEQ 600

Query: 601 LDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           ++LL ELVP+WISEKLASS DVL+CI++LSSA TVRARL EAK
Sbjct: 601 INLLLELVPDWISEKLASSGDVLLCIDRLSSAETVRARLAEAK 628

[Close]

BLAST of Sed0018460 vs. NCBI nr
Match: XP_022963958.1 (CDT1-like protein b [Cucurbita moschata])

HSP 1 Score: 760.0 bits (1961), Expect = 1.6e-215
Identity = 455/648 (70.22%), Postives = 510/648 (78.70%), Query Frame = 0


Query: 1   MDVSEKTN--SSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVH 60
           MD SEK +  SSS PF+SKKTLRSNSKSL +DQ  Q LSSKTPEK+A L T+ R RKV  
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQ--QSLSSKTPEKSAELTTRTRSRKVAL 60

Query: 61  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 120
           SIK VRRAAESV  SNRQ  +  D TTE S+SVRR++DS  N   SSR K SVD SK L+
Sbjct: 61  SIKEVRRAAESVRESNRQLPR--DLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLT 120

Query: 121 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 180
           EKFEILSKFFDSLDS MRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQ+KFI+PEAI
Sbjct: 121 EKFEILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIVPEAI 180

Query: 181 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 240
           ELKKV I DERTSC KPDLHISFNFSVLDN+D+L+ G++ MQLRKLFKARL EF +SHPE
Sbjct: 181 ELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPE 240

Query: 241 IDDVPKDLLPKPFNFPSQDNIVQTN---------------TPAISSTTNVIEEIPFNHHP 300
           IDDVPKDLLPKPFN  SQD   +TN                PAISS T+V E+     H 
Sbjct: 241 IDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-TSVAED-----HS 300

Query: 301 EESQGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCV 360
            E+QGFRI+KS   M  +  S QKE IG SHFS S +R FS+K VNRE E T  A K   
Sbjct: 301 NENQGFRIIKS--TMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQAAKRSD 360

Query: 361 QSSSHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTP 420
           Q    SD ET I+T      SSS  FSPVKLPS  T NS+C +NYASP+RSS+LPLPTTP
Sbjct: 361 QIPFCSDAETKIETE-----SSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTP 420

Query: 421 SNMADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSP-EEDSS 480
           SNMA RV +T E D  +AKTSDI STPAKLVSTPARLMASTPAM PPKRSSMSP E+DSS
Sbjct: 421 SNMAARVALTNEDD-PTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDEDDSS 480

Query: 481 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEI 540
            S NKL+RRPPRSRSLVFDTPTKEDKN+D+ D T  AS  DD+L +LP SL+QSIREKE 
Sbjct: 481 RSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKER 540

Query: 541 KAKEEQSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKR 600
           K KEEQ PAISQAKRR+KMI++LPKLF+AIFFLFHKRTVIT+EELIYK++VGN +IVDK+
Sbjct: 541 KIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKK 600

Query: 601 EIEEQLDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EIEEQ++LL ELVP+WISEKLASS DVL+CI+KLSSA T+RARL EAK
Sbjct: 601 EIEEQINLLLELVPDWISEKLASSGDVLLCIDKLSSAETIRARLAEAK 629

[Close]

BLAST of Sed0018460 vs. NCBI nr
Match: XP_022146049.1 (CDT1-like protein b [Momordica charantia])

HSP 1 Score: 759.6 bits (1960), Expect = 2.1e-215
Identity = 442/641 (68.95%), Postives = 501/641 (78.16%), Query Frame = 0


Query: 1   MDVSEKTNSSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVHSI 60
           MD SE T+SSS  FRSKKT  SNSKSL  DQ  Q +SS TPEK A L T+ R RKV  SI
Sbjct: 1   MDASETTSSSSIRFRSKKTFHSNSKSLLPDQ--QSVSSMTPEKPAELSTRTRNRKVALSI 60

Query: 61  KGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILSEK 120
           K VR+AAESV  SN+QQ    DRT  R +SVRR++DS  + + ++RSK ++D    + EK
Sbjct: 61  KEVRKAAESVRESNKQQPP--DRTGMR-KSVRRQIDSWPDVTPANRSKSAIDKPMEIPEK 120

Query: 121 FEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAIEL 180
           F+ILS FFDSLD AMRLLR +G+ASNFSN+CPKIE LTDRRFSYGHLAQLKFILPEAIEL
Sbjct: 121 FQILSLFFDSLDRAMRLLRLRGLASNFSNICPKIEYLTDRRFSYGHLAQLKFILPEAIEL 180

Query: 181 KKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPEID 240
           KKVH+ DERTSC KPDLHISFN  VLDNQ+ L+ G +N+ LRKLF  RL EFV+SHPEID
Sbjct: 181 KKVHVFDERTSCMKPDLHISFNLGVLDNQESLETGSQNLNLRKLFCTRLSEFVSSHPEID 240

Query: 241 DVPKDLLPKPFNFPSQDNIVQTNT----------PAISSTTNVIEEIPFNHHPEESQGFR 300
           +VPK LLP+PFN  SQD   +TN+          PAISS TN  E IPFN H EES GFR
Sbjct: 241 EVPKGLLPEPFNRSSQDLFRKTNSLSPVETAPEQPAISS-TNDAEGIPFN-HSEESLGFR 300

Query: 301 IVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSD 360
           IVKS VP      S QK  IGASHFSQS SRRFS+KVV+RE E TD AT+ C Q+ SHSD
Sbjct: 301 IVKSTVPRTVVDPSKQKNLIGASHFSQSFSRRFSQKVVSREVEKTDQATRPCAQNPSHSD 360

Query: 361 VETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRV 420
            ET I T   NAV SSK  SPVKLPSN T +S+  +NYASPIR S+ PLP+TP +MA R 
Sbjct: 361 AETNIKTEFCNAVPSSKPLSPVKLPSNSTCDSNYFENYASPIRVSAPPLPSTPIDMAVRG 420

Query: 421 TMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSPEEDSSFSTNKLIR 480
           T T E D  SAKT+DI+STPAKLVSTP RLMA TPAM PPKRSS SP +DSS+S NKLIR
Sbjct: 421 TSTNE-DYPSAKTNDIDSTPAKLVSTPVRLMAITPAMPPPKRSSRSPHDDSSWSANKLIR 480

Query: 481 RPPRSRSLVFDTPTKEDKNEDEI-DGTSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQS 540
           RPPRSRSL+FDTPTKEDKNEDEI DGTS  S  DD+L +LP SLLQSIREKE K KEEQ+
Sbjct: 481 RPPRSRSLIFDTPTKEDKNEDEIDDGTSSTSLDDDILDILPQSLLQSIREKERKVKEEQT 540

Query: 541 PAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKREIEEQLD 600
           PAISQAKRR+KMI+NLPKLF+AI+FLFHKRTVITKEELI+K++ GN +IVD+REIEEQL 
Sbjct: 541 PAISQAKRRRKMIANLPKLFNAIYFLFHKRTVITKEELIFKIISGNVDIVDRREIEEQLA 600

Query: 601 LLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           LL ELVPEWISEKLASS D L+CI++LSSA  VRARLEEAK
Sbjct: 601 LLLELVPEWISEKLASSGDSLLCIDRLSSAEMVRARLEEAK 633

[Close]

BLAST of Sed0018460 vs. NCBI nr
Match: KAG6571515.1 (CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 758.8 bits (1958), Expect = 3.6e-215
Identity = 454/648 (70.06%), Postives = 508/648 (78.40%), Query Frame = 0


Query: 1   MDVSEKTN--SSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVH 60
           MD SEK +  SSS PF+SKKTLRSNSKSL +DQ  Q LSSKTPEK A L T+ R RKV  
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQ--QSLSSKTPEKPAELTTRTRSRKVAL 60

Query: 61  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 120
           SIK VRRAAESV  SNRQ  +  D TTE S+SVRR++DS  N   SSR K SVD SK L 
Sbjct: 61  SIKEVRRAAESVRESNRQLPR--DLTTEGSKSVRRQIDSWSNKCPSSRFKTSVDKSKKLP 120

Query: 121 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 180
           EKFE LSKFFDSLDS MRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQ+KFI+PEAI
Sbjct: 121 EKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIVPEAI 180

Query: 181 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 240
           ELKKV I DERTSC KPDLHISFNFSVLDN+D+L+ G++ MQLRKLFKARL EF +SHPE
Sbjct: 181 ELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPE 240

Query: 241 IDDVPKDLLPKPFNFPSQDNIVQTN---------------TPAISSTTNVIEEIPFNHHP 300
           IDDVPKDLLPKPFN  SQD   +TN                PAISS T+V E+     H 
Sbjct: 241 IDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-TSVAED-----HS 300

Query: 301 EESQGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCV 360
            E+QGFRI+KS   M  +  S QKE IG SHFS S +R FS+K VNRE E T  A K   
Sbjct: 301 NENQGFRIIKS--TMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQAAKRSD 360

Query: 361 QSSSHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTP 420
           Q    SD ET I+T      SSS  FSPVKLPSN T NS+C +NYASP+RSS+LPLPTTP
Sbjct: 361 QIPFCSDAETKIETE-----SSSMPFSPVKLPSNSTCNSNCPENYASPLRSSALPLPTTP 420

Query: 421 SNMADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSP-EEDSS 480
           SNMA RV +T E D  +AKTSDI STPAKLVSTPARLMASTPAM PPKRSSMSP ++DSS
Sbjct: 421 SNMAARVALTNEDD-PTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSS 480

Query: 481 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEI 540
            S NKL+RRPPRSRSLVFDTPTKEDKN+D+ D T  AS  DD+L +LP SL+QSIREKE 
Sbjct: 481 RSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKER 540

Query: 541 KAKEEQSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKR 600
           K KEEQ PAISQAKRR+KMI++LPKLF+AIFFLFHKRTVIT+EELIYK++VGN +IVDK+
Sbjct: 541 KIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKK 600

Query: 601 EIEEQLDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EIEEQ++LL ELVP+WISEKLASS DVL+CI+KLSSA T+RARL EAK
Sbjct: 601 EIEEQINLLLELVPDWISEKLASSGDVLLCIDKLSSAETIRARLAEAK 629

[Close]

BLAST of Sed0018460 vs. NCBI nr
Match: XP_022967387.1 (CDT1-like protein b [Cucurbita maxima])

HSP 1 Score: 755.7 bits (1950), Expect = 3.1e-214
Identity = 452/648 (69.75%), Postives = 509/648 (78.55%), Query Frame = 0


Query: 1   MDVSEKTN--SSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVH 60
           MD SEK +  SSS PF+SKKTLRSNSKSL +DQ  Q LSSKTPEK+A L T+ R RKV  
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQ--QSLSSKTPEKSAELSTRTRSRKVAL 60

Query: 61  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 120
           SIK VRRAAESV  SNRQ  +  D TTE S+SVRR++DS  N S SSR K SVD  K L 
Sbjct: 61  SIKEVRRAAESVRESNRQLPR--DLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKYKKLP 120

Query: 121 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 180
           EKFE LSKFFDSLDS MRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQ+KFI+PEAI
Sbjct: 121 EKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIVPEAI 180

Query: 181 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 240
           ELKKV I DERTSC KPDLHISFNF VLDN+DD++ G++ MQLRKLFKARL EF +SHPE
Sbjct: 181 ELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFKARLSEFASSHPE 240

Query: 241 IDDVPKDLLPKPFNFPSQDNIVQTN---------------TPAISSTTNVIEEIPFNHHP 300
           IDDVPKDLLPKPFN  SQD   +TN                PAISS T+V E+     H 
Sbjct: 241 IDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-TSVAED-----HS 300

Query: 301 EESQGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCV 360
            E+QGFRI+KS   M  T  S QKE +G SHFS S +RRFS+K  +RE E T  A+K   
Sbjct: 301 NENQGFRIIKS--TMTVTGPSKQKELMGLSHFSPSFTRRFSQK-GSREMEKTGQASKRSD 360

Query: 361 QSSSHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTP 420
           Q    SD ET I+T      SSS LFSPVKLPSN T NS+C +NYASP+RSS+ PLPTTP
Sbjct: 361 QIPFGSDAETKIETE-----SSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTP 420

Query: 421 SNMADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSP-EEDSS 480
           SNMA RV +T E D  +AKTSDI STPAKLVSTPARLMASTPAM PPKRSSMSP ++DSS
Sbjct: 421 SNMAARVAITNE-DEPTAKTSDIESTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSS 480

Query: 481 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEI 540
            S NKL+RRPPRSRSLVFDTPTKEDKN+D+ D T  AS  DD+L +LP SL+QSIREKE 
Sbjct: 481 RSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKER 540

Query: 541 KAKEEQSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKR 600
           K KEEQ PAISQAKRR+KMI++LPKLF+AIFFLFHKRTVIT+EELIYK++VGN +IVDK+
Sbjct: 541 KIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKK 600

Query: 601 EIEEQLDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EIEEQ++LL ELVPEWISEKLASS DVL+CI+KLSSA T+RARL EA+
Sbjct: 601 EIEEQINLLLELVPEWISEKLASSGDVLLCIDKLSSAETIRARLAEAE 629

[Close]

BLAST of Sed0018460 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-78
Identity = 234/641 (36.51%), Postives = 347/641 (54.13%), Query Frame = 0


Query: 3   VSEKTNSSSFPFRSKKTL---RSNSKSLPEDQPVQPLSSKTPEKAAA-LPTKARGRKVVH 62
           +S   +S S PF+SKK L     +SKS   +     ++  TPEK    + +++R R V  
Sbjct: 1   MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60

Query: 63  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 122
           S+K +R+AA    GS R+ +   D     ++S R   DS  ++ S  +S       + L 
Sbjct: 61  SVKEIRQAA----GSRRRSE---DPVASSAKS-RLFFDSSSSSPSKRKSSNKNAEKEKLP 120

Query: 123 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 182
           EK+E L KFF++LD++M L + +G    FSN+  +IE LT+RRF Y HLAQ+K ILPEAI
Sbjct: 121 EKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAI 180

Query: 183 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 242
           E+K+V I DE T C KPDLH++ N   ++  D      + + LRK+F+ARL +FV +HP+
Sbjct: 181 EIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQ 240

Query: 243 IDDVPKDLLPKPFNFPSQDNIVQTNTPAISSTTNVIEEIPFNHHPEESQGFRIVKSMVPM 302
            D+VP++ LP+PFN            P  +S   V                + V S++  
Sbjct: 241 GDEVPEEPLPEPFN---------RRKPVENSNVEV----------------KRVSSLMEE 300

Query: 303 MATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSDVETIIDTN 362
           MA               S   S+ FS  + +   ++T   + L   +SS  ++       
Sbjct: 301 MA---------------SIPASKLFSSPITSTPVKTT---SSLAKPTSSQINIAP----- 360

Query: 363 IYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRVTMTKEGDV 422
                      +P K  S P   +    N         LP P  P +   +   T     
Sbjct: 361 -----------TPTKPTSTPAKQTLSEINI--------LPTPVKPVSTLAKFPST---PA 420

Query: 423 VSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSS--MSPEEDSSFSTNKLIRRPPRSR 482
           +   T  I +TP +  STPARLM+++ A RP KRS+   +P++ S+    KL+R   RS 
Sbjct: 421 IIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDDISADPPTKLVR---RSL 480

Query: 483 SLVFDTPTKEDKNEDEIDG-------TSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQS 542
           SL FD+  ++++  D  D            S  D++L +LP  L  +I+E+E KA E+Q+
Sbjct: 481 SLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLRHAIKEQERKAIEDQN 540

Query: 543 PAISQAKRRKKMISNLPKLFDAIFFLFH--KRTVITKEELIYKLVVGNAEIVDKREIEEQ 602
           PAIS AKRR+KMI+ LPKLF+ I +L    +R VITKEEL++K++ G+++I D++E+EEQ
Sbjct: 541 PAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQ 560

Query: 603 LDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEE 629
           L LLQE+VPEW+SEK +SS DVLVCI KL+S  T+R+RLEE
Sbjct: 601 LILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLEE 560

[Close]

BLAST of Sed0018460 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.0e-55
Identity = 188/562 (33.45%), Postives = 271/562 (48.22%), Query Frame = 0


Query: 107 SKPSVDNSKILSEKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGH 166
           S P  ++   L E+FEIL +FF+ LD+A+RLL+ KG ++ ++N+CPKIE LT+R FSY H
Sbjct: 36  SSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSYDH 95

Query: 167 LAQLKFILPEAIELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFK 226
           LAQ+K I PEAIELK+V    E T C KP LHI  N   +  +D +  G + M+LRK+F 
Sbjct: 96  LAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFH 155

Query: 227 ARLLEFVNSHPEIDDVPKDLLPKPFNFPSQDNIVQTNTPAISSTTNVIEEIPFNHHPEES 286
           ++L++F  +HP+ D++PK+LLP+PFN P +D+   +   ++      +E   F+ H EE 
Sbjct: 156 SKLVDFRKAHPK-DEIPKELLPEPFNSPQRDS--YSGIVSVGLGEPKLEVGGFDVHMEE- 215

Query: 287 QGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSS 346
                             I++E                                      
Sbjct: 216 ------------------IEQE-------------------------------------- 275

Query: 347 SHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNM 406
              DV  +I  +  + + S  + +PVK                                 
Sbjct: 276 -EQDVNKVIPDSTLSHIESRIVETPVK--------------------------------- 335

Query: 407 ADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRS-SMSPE---EDSS 466
                             D+ STP+K +STP RLM++TP ++  KR   ++PE   ++S 
Sbjct: 336 ------------------DL-STPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSL 395

Query: 467 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIR---- 526
            STN L R P  SRSL FDT  ++   +D+I   S     D  +      LLQS++    
Sbjct: 396 RSTNSLARGP--SRSLNFDTFEEDAIEKDDIGNES----DDKGINYEEDGLLQSVKGPSR 455

Query: 527 -------EKEIKAKEEQSPAISQAKRR-------------KKMIS---------NLPKLF 586
                  E+E   K++ S      K               + MI          NLP+L 
Sbjct: 456 SLNFDTLEEETIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLV 477

Query: 587 DAIFFLFH--KRTVITKEELIYKLVVGNAEIVDKREIEEQLDLLQELVPEWISEKLASSD 630
           + I  +FH   RTVITKEEL+YK++     I D+RE+EEQL L+ +LVP+WISE  ASS 
Sbjct: 516 NLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISETKASSG 477

[Close]

BLAST of Sed0018460 vs. ExPASy TrEMBL
Match: A0A6J1HJE5 (CDT1-like protein b OS=Cucurbita moschata OX=3662 GN=LOC111464103 PE=3 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 7.9e-216
Identity = 455/648 (70.22%), Postives = 510/648 (78.70%), Query Frame = 0


Query: 1   MDVSEKTN--SSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVH 60
           MD SEK +  SSS PF+SKKTLRSNSKSL +DQ  Q LSSKTPEK+A L T+ R RKV  
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQ--QSLSSKTPEKSAELTTRTRSRKVAL 60

Query: 61  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 120
           SIK VRRAAESV  SNRQ  +  D TTE S+SVRR++DS  N   SSR K SVD SK L+
Sbjct: 61  SIKEVRRAAESVRESNRQLPR--DLTTEGSKSVRRQIDSWSNECPSSRFKTSVDKSKKLT 120

Query: 121 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 180
           EKFEILSKFFDSLDS MRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQ+KFI+PEAI
Sbjct: 121 EKFEILSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIVPEAI 180

Query: 181 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 240
           ELKKV I DERTSC KPDLHISFNFSVLDN+D+L+ G++ MQLRKLFKARL EF +SHPE
Sbjct: 181 ELKKVMIFDERTSCMKPDLHISFNFSVLDNKDNLETGNQYMQLRKLFKARLSEFASSHPE 240

Query: 241 IDDVPKDLLPKPFNFPSQDNIVQTN---------------TPAISSTTNVIEEIPFNHHP 300
           IDDVPKDLLPKPFN  SQD   +TN                PAISS T+V E+     H 
Sbjct: 241 IDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-TSVAED-----HS 300

Query: 301 EESQGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCV 360
            E+QGFRI+KS   M  +  S QKE IG SHFS S +R FS+K VNRE E T  A K   
Sbjct: 301 NENQGFRIIKS--TMTVSGPSKQKELIGLSHFSPSFTRHFSQK-VNREMEKTGQAAKRSD 360

Query: 361 QSSSHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTP 420
           Q    SD ET I+T      SSS  FSPVKLPS  T NS+C +NYASP+RSS+LPLPTTP
Sbjct: 361 QIPFCSDAETKIETE-----SSSMPFSPVKLPSYSTCNSNCPENYASPLRSSALPLPTTP 420

Query: 421 SNMADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSP-EEDSS 480
           SNMA RV +T E D  +AKTSDI STPAKLVSTPARLMASTPAM PPKRSSMSP E+DSS
Sbjct: 421 SNMAARVALTNEDD-PTAKTSDIKSTPAKLVSTPARLMASTPAMAPPKRSSMSPDEDDSS 480

Query: 481 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEI 540
            S NKL+RRPPRSRSLVFDTPTKEDKN+D+ D T  AS  DD+L +LP SL+QSIREKE 
Sbjct: 481 RSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKER 540

Query: 541 KAKEEQSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKR 600
           K KEEQ PAISQAKRR+KMI++LPKLF+AIFFLFHKRTVIT+EELIYK++VGN +IVDK+
Sbjct: 541 KIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNVDIVDKK 600

Query: 601 EIEEQLDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EIEEQ++LL ELVP+WISEKLASS DVL+CI+KLSSA T+RARL EAK
Sbjct: 601 EIEEQINLLLELVPDWISEKLASSGDVLLCIDKLSSAETIRARLAEAK 629

[Close]

BLAST of Sed0018460 vs. ExPASy TrEMBL
Match: A0A6J1CX08 (CDT1-like protein b OS=Momordica charantia OX=3673 GN=LOC111015352 PE=3 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 1.0e-215
Identity = 442/641 (68.95%), Postives = 501/641 (78.16%), Query Frame = 0


Query: 1   MDVSEKTNSSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVHSI 60
           MD SE T+SSS  FRSKKT  SNSKSL  DQ  Q +SS TPEK A L T+ R RKV  SI
Sbjct: 1   MDASETTSSSSIRFRSKKTFHSNSKSLLPDQ--QSVSSMTPEKPAELSTRTRNRKVALSI 60

Query: 61  KGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILSEK 120
           K VR+AAESV  SN+QQ    DRT  R +SVRR++DS  + + ++RSK ++D    + EK
Sbjct: 61  KEVRKAAESVRESNKQQPP--DRTGMR-KSVRRQIDSWPDVTPANRSKSAIDKPMEIPEK 120

Query: 121 FEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAIEL 180
           F+ILS FFDSLD AMRLLR +G+ASNFSN+CPKIE LTDRRFSYGHLAQLKFILPEAIEL
Sbjct: 121 FQILSLFFDSLDRAMRLLRLRGLASNFSNICPKIEYLTDRRFSYGHLAQLKFILPEAIEL 180

Query: 181 KKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPEID 240
           KKVH+ DERTSC KPDLHISFN  VLDNQ+ L+ G +N+ LRKLF  RL EFV+SHPEID
Sbjct: 181 KKVHVFDERTSCMKPDLHISFNLGVLDNQESLETGSQNLNLRKLFCTRLSEFVSSHPEID 240

Query: 241 DVPKDLLPKPFNFPSQDNIVQTNT----------PAISSTTNVIEEIPFNHHPEESQGFR 300
           +VPK LLP+PFN  SQD   +TN+          PAISS TN  E IPFN H EES GFR
Sbjct: 241 EVPKGLLPEPFNRSSQDLFRKTNSLSPVETAPEQPAISS-TNDAEGIPFN-HSEESLGFR 300

Query: 301 IVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSD 360
           IVKS VP      S QK  IGASHFSQS SRRFS+KVV+RE E TD AT+ C Q+ SHSD
Sbjct: 301 IVKSTVPRTVVDPSKQKNLIGASHFSQSFSRRFSQKVVSREVEKTDQATRPCAQNPSHSD 360

Query: 361 VETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRV 420
            ET I T   NAV SSK  SPVKLPSN T +S+  +NYASPIR S+ PLP+TP +MA R 
Sbjct: 361 AETNIKTEFCNAVPSSKPLSPVKLPSNSTCDSNYFENYASPIRVSAPPLPSTPIDMAVRG 420

Query: 421 TMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSPEEDSSFSTNKLIR 480
           T T E D  SAKT+DI+STPAKLVSTP RLMA TPAM PPKRSS SP +DSS+S NKLIR
Sbjct: 421 TSTNE-DYPSAKTNDIDSTPAKLVSTPVRLMAITPAMPPPKRSSRSPHDDSSWSANKLIR 480

Query: 481 RPPRSRSLVFDTPTKEDKNEDEI-DGTSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQS 540
           RPPRSRSL+FDTPTKEDKNEDEI DGTS  S  DD+L +LP SLLQSIREKE K KEEQ+
Sbjct: 481 RPPRSRSLIFDTPTKEDKNEDEIDDGTSSTSLDDDILDILPQSLLQSIREKERKVKEEQT 540

Query: 541 PAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKREIEEQLD 600
           PAISQAKRR+KMI+NLPKLF+AI+FLFHKRTVITKEELI+K++ GN +IVD+REIEEQL 
Sbjct: 541 PAISQAKRRRKMIANLPKLFNAIYFLFHKRTVITKEELIFKIISGNVDIVDRREIEEQLA 600

Query: 601 LLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           LL ELVPEWISEKLASS D L+CI++LSSA  VRARLEEAK
Sbjct: 601 LLLELVPEWISEKLASSGDSLLCIDRLSSAEMVRARLEEAK 633

[Close]

BLAST of Sed0018460 vs. ExPASy TrEMBL
Match: A0A6J1HQP8 (CDT1-like protein b OS=Cucurbita maxima OX=3661 GN=LOC111466932 PE=3 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.5e-214
Identity = 452/648 (69.75%), Postives = 509/648 (78.55%), Query Frame = 0


Query: 1   MDVSEKTN--SSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVH 60
           MD SEK +  SSS PF+SKKTLRSNSKSL +DQ  Q LSSKTPEK+A L T+ R RKV  
Sbjct: 1   MDASEKISSPSSSLPFKSKKTLRSNSKSLLQDQ--QSLSSKTPEKSAELSTRTRSRKVAL 60

Query: 61  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 120
           SIK VRRAAESV  SNRQ  +  D TTE S+SVRR++DS  N S SSR K SVD  K L 
Sbjct: 61  SIKEVRRAAESVRESNRQLPR--DLTTEGSKSVRRQIDSWSNESPSSRFKTSVDKYKKLP 120

Query: 121 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 180
           EKFE LSKFFDSLDS MRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQ+KFI+PEAI
Sbjct: 121 EKFEFLSKFFDSLDSVMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQMKFIVPEAI 180

Query: 181 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 240
           ELKKV I DERTSC KPDLHISFNF VLDN+DD++ G++ MQLRKLFKARL EF +SHPE
Sbjct: 181 ELKKVLIFDERTSCMKPDLHISFNFGVLDNKDDVETGNQYMQLRKLFKARLSEFASSHPE 240

Query: 241 IDDVPKDLLPKPFNFPSQDNIVQTN---------------TPAISSTTNVIEEIPFNHHP 300
           IDDVPKDLLPKPFN  SQD   +TN                PAISS T+V E+     H 
Sbjct: 241 IDDVPKDLLPKPFNCSSQDLFPKTNFLSSVKAPIEQLAAEQPAISS-TSVAED-----HS 300

Query: 301 EESQGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCV 360
            E+QGFRI+KS   M  T  S QKE +G SHFS S +RRFS+K  +RE E T  A+K   
Sbjct: 301 NENQGFRIIKS--TMTVTGPSKQKELMGLSHFSPSFTRRFSQK-GSREMEKTGQASKRSD 360

Query: 361 QSSSHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTP 420
           Q    SD ET I+T      SSS LFSPVKLPSN T NS+C +NYASP+RSS+ PLPTTP
Sbjct: 361 QIPFGSDAETKIETE-----SSSMLFSPVKLPSNSTCNSNCPENYASPLRSSAFPLPTTP 420

Query: 421 SNMADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSP-EEDSS 480
           SNMA RV +T E D  +AKTSDI STPAKLVSTPARLMASTPAM PPKRSSMSP ++DSS
Sbjct: 421 SNMAARVAITNE-DEPTAKTSDIESTPAKLVSTPARLMASTPAMAPPKRSSMSPDDDDSS 480

Query: 481 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEI 540
            S NKL+RRPPRSRSLVFDTPTKEDKN+D+ D T  AS  DD+L +LP SL+QSIREKE 
Sbjct: 481 RSANKLVRRPPRSRSLVFDTPTKEDKNDDQKDLTRCASPDDDILDILPQSLVQSIREKER 540

Query: 541 KAKEEQSPAISQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKR 600
           K KEEQ PAISQAKRR+KMI++LPKLF+AIFFLFHKRTVIT+EELIYK++VGN +IVDK+
Sbjct: 541 KIKEEQMPAISQAKRRQKMIASLPKLFNAIFFLFHKRTVITREELIYKIIVGNMDIVDKK 600

Query: 601 EIEEQLDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EIEEQ++LL ELVPEWISEKLASS DVL+CI+KLSSA T+RARL EA+
Sbjct: 601 EIEEQINLLLELVPEWISEKLASSGDVLLCIDKLSSAETIRARLAEAE 629

[Close]

BLAST of Sed0018460 vs. ExPASy TrEMBL
Match: A0A5D3DKW1 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00410 PE=3 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.7e-189
Identity = 406/638 (63.64%), Postives = 470/638 (73.67%), Query Frame = 0


Query: 4   SEKTNSSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVHSIKGV 63
           S  ++SS+ PF+SKK LRSNSKSL ED   Q LSSKTPEK A L T+ R RKV  SIK V
Sbjct: 12  SSSSSSSTLPFKSKKPLRSNSKSLLEDP--QSLSSKTPEKPAELSTRTRNRKVALSIKEV 71

Query: 64  RRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDN-SKILSEKFE 123
           +RAA SV  SNRQ    L    E S+SVRR++D   N S       SVDN SK   EKFE
Sbjct: 72  KRAALSVTQSNRQLP--LHLAIEESKSVRRQIDLWSNESQ------SVDNKSKKFPEKFE 131

Query: 124 ILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAIELKK 183
           +L KFF SLDSAMRLLRFKGVASNFSNVCPKIE LTDRRF+YGHLAQ KFIL EAI LKK
Sbjct: 132 MLCKFFYSLDSAMRLLRFKGVASNFSNVCPKIEALTDRRFTYGHLAQFKFILREAIVLKK 191

Query: 184 VHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPEIDDV 243
           V + DERT C KPDLHISFNF V +NQ+     D+ MQLRKLF+ARL EFV+S+PE DDV
Sbjct: 192 VLVYDERTCCMKPDLHISFNFGVPENQE-----DQYMQLRKLFRARLSEFVSSYPETDDV 251

Query: 244 PKDLLPKPFNFPSQDNIVQTNTPAISSTT----------NVIEEIPFNHHPEESQGFRIV 303
           PKDLLP PFNF SQD + ++N+ +   T+            IE I FNHH EE QGFR+V
Sbjct: 252 PKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSIEGISFNHHSEEHQGFRMV 311

Query: 304 KSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSDVE 363
           KS +P+  T  S QKEFIG SHFS S SRRFS+KVV+RE  + D  TK   Q SS++DVE
Sbjct: 312 KSTMPV--TDPSKQKEFIGLSHFSPSFSRRFSQKVVDREIANNDQVTKPSNQVSSYTDVE 371

Query: 364 TIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRVTM 423
           T ID       SS++ FSP+KLPSN T N +C  NYASPIR S+L LPTTPSN   RVTM
Sbjct: 372 TNIDMESSVVASSTEPFSPIKLPSNSTCNVNCHKNYASPIRCSALALPTTPSNTVGRVTM 431

Query: 424 TKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSPEEDSSFSTNKLIRRP 483
             E D  SAK +DI+STP KL+STP +LM +TPAM PPKRSSM+P++DSSFSTNKL+RRP
Sbjct: 432 MVECD-QSAKANDIDSTPGKLLSTPTQLMTNTPAMPPPKRSSMTPDDDSSFSTNKLVRRP 491

Query: 484 PRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQSPAI 543
           PRSRSLVFDTPTKEDKN DE D     S  DD+L VL  SL+QSI+EKE K KEEQ PAI
Sbjct: 492 PRSRSLVFDTPTKEDKNNDETD----VSLEDDILDVLSSSLVQSIKEKERKVKEEQMPAI 551

Query: 544 SQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKREIEEQLDLLQ 603
           +QAKRR+KMI+NLPKLF+AIFFL+HKRTVI K++L+ +++ G+    DKREIEEQLDLL 
Sbjct: 552 TQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGS----DKREIEEQLDLLF 611

Query: 604 ELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EL PEWI  KL S  DVLVCI KL++  +VR RLEEAK
Sbjct: 612 ELAPEWIYPKLTSGGDVLVCINKLANVESVRVRLEEAK 623

[Close]

BLAST of Sed0018460 vs. ExPASy TrEMBL
Match: A0A1S3C211 (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=3 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.7e-189
Identity = 406/638 (63.64%), Postives = 470/638 (73.67%), Query Frame = 0


Query: 4   SEKTNSSSFPFRSKKTLRSNSKSLPEDQPVQPLSSKTPEKAAALPTKARGRKVVHSIKGV 63
           S  ++SS+ PF+SKK LRSNSKSL ED   Q LSSKTPEK A L T+ R RKV  SIK V
Sbjct: 12  SSSSSSSTLPFKSKKPLRSNSKSLLEDP--QSLSSKTPEKPAELSTRTRNRKVALSIKEV 71

Query: 64  RRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDN-SKILSEKFE 123
           +RAA SV  SNRQ    L    E S+SVRR++D   N S       SVDN SK   EKFE
Sbjct: 72  KRAALSVTQSNRQLP--LHLAIEESKSVRRQIDLWSNESQ------SVDNKSKKFPEKFE 131

Query: 124 ILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAIELKK 183
           +L KFF SLDSAMRLLRFKGVASNFSNVCPKIE LTDRRF+YGHLAQ KFIL EAI LKK
Sbjct: 132 MLCKFFYSLDSAMRLLRFKGVASNFSNVCPKIEALTDRRFTYGHLAQFKFILREAIVLKK 191

Query: 184 VHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPEIDDV 243
           V + DERT C KPDLHISFNF V +NQ+     D+ MQLRKLF+ARL EFV+S+PE DDV
Sbjct: 192 VLVYDERTCCMKPDLHISFNFGVPENQE-----DQYMQLRKLFRARLSEFVSSYPETDDV 251

Query: 244 PKDLLPKPFNFPSQDNIVQTNTPAISSTT----------NVIEEIPFNHHPEESQGFRIV 303
           PKDLLP PFNF SQD + ++N+ +   T+            IE I FNHH EE QGFR+V
Sbjct: 252 PKDLLPNPFNFRSQDLVAKSNSLSSIKTSIEQLAPEQPMPSIEGISFNHHSEEHQGFRMV 311

Query: 304 KSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSDVE 363
           KS +P+  T  S QKEFIG SHFS S SRRFS+KVV+RE  + D  TK   Q SS++DVE
Sbjct: 312 KSTMPV--TDPSKQKEFIGLSHFSPSFSRRFSQKVVDREIANNDQVTKPSNQVSSYTDVE 371

Query: 364 TIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRVTM 423
           T ID       SS++ FSP+KLPSN T N +C  NYASPIR S+L LPTTPSN   RVTM
Sbjct: 372 TNIDMESSVVASSTEPFSPIKLPSNSTCNVNCHKNYASPIRCSALALPTTPSNTVGRVTM 431

Query: 424 TKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSSMSPEEDSSFSTNKLIRRP 483
             E D  SAK +DI+STP KL+STP +LM +TPAM PPKRSSM+P++DSSFSTNKL+RRP
Sbjct: 432 MVECD-QSAKANDIDSTPGKLLSTPTQLMTNTPAMPPPKRSSMTPDDDSSFSTNKLVRRP 491

Query: 484 PRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQSPAI 543
           PRSRSLVFDTPTKEDKN DE D     S  DD+L VL  SL+QSI+EKE K KEEQ PAI
Sbjct: 492 PRSRSLVFDTPTKEDKNNDETD----VSLEDDILDVLSSSLVQSIKEKERKVKEEQMPAI 551

Query: 544 SQAKRRKKMISNLPKLFDAIFFLFHKRTVITKEELIYKLVVGNAEIVDKREIEEQLDLLQ 603
           +QAKRR+KMI+NLPKLF+AIFFL+HKRTVI K++L+ +++ G+    DKREIEEQLDLL 
Sbjct: 552 TQAKRRQKMIANLPKLFNAIFFLYHKRTVIRKQKLLNEIIAGS----DKREIEEQLDLLF 611

Query: 604 ELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEEAK 631
           EL PEWI  KL S  DVLVCI KL++  +VR RLEEAK
Sbjct: 612 ELAPEWIYPKLTSGGDVLVCINKLANVESVRVRLEEAK 623

[Close]

BLAST of Sed0018460 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A )

HSP 1 Score: 294.3 bits (752), Expect = 2.4e-79
Identity = 234/641 (36.51%), Postives = 347/641 (54.13%), Query Frame = 0


Query: 3   VSEKTNSSSFPFRSKKTL---RSNSKSLPEDQPVQPLSSKTPEKAAA-LPTKARGRKVVH 62
           +S   +S S PF+SKK L     +SKS   +     ++  TPEK    + +++R R V  
Sbjct: 1   MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60

Query: 63  SIKGVRRAAESVHGSNRQQQQLLDRTTERSRSVRRKLDSLQNTSSSSRSKPSVDNSKILS 122
           S+K +R+AA    GS R+ +   D     ++S R   DS  ++ S  +S       + L 
Sbjct: 61  SVKEIRQAA----GSRRRSE---DPVASSAKS-RLFFDSSSSSPSKRKSSNKNAEKEKLP 120

Query: 123 EKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGHLAQLKFILPEAI 182
           EK+E L KFF++LD++M L + +G    FSN+  +IE LT+RRF Y HLAQ+K ILPEAI
Sbjct: 121 EKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAI 180

Query: 183 ELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFKARLLEFVNSHPE 242
           E+K+V I DE T C KPDLH++ N   ++  D      + + LRK+F+ARL +FV +HP+
Sbjct: 181 EIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQ 240

Query: 243 IDDVPKDLLPKPFNFPSQDNIVQTNTPAISSTTNVIEEIPFNHHPEESQGFRIVKSMVPM 302
            D+VP++ LP+PFN            P  +S   V                + V S++  
Sbjct: 241 GDEVPEEPLPEPFN---------RRKPVENSNVEV----------------KRVSSLMEE 300

Query: 303 MATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSSSHSDVETIIDTN 362
           MA               S   S+ FS  + +   ++T   + L   +SS  ++       
Sbjct: 301 MA---------------SIPASKLFSSPITSTPVKTT---SSLAKPTSSQINIAP----- 360

Query: 363 IYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNMADRVTMTKEGDV 422
                      +P K  S P   +    N         LP P  P +   +   T     
Sbjct: 361 -----------TPTKPTSTPAKQTLSEINI--------LPTPVKPVSTLAKFPST---PA 420

Query: 423 VSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRSS--MSPEEDSSFSTNKLIRRPPRSR 482
           +   T  I +TP +  STPARLM+++ A RP KRS+   +P++ S+    KL+R   RS 
Sbjct: 421 IIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDDISADPPTKLVR---RSL 480

Query: 483 SLVFDTPTKEDKNEDEIDG-------TSRASFGDDLLGVLPLSLLQSIREKEIKAKEEQS 542
           SL FD+  ++++  D  D            S  D++L +LP  L  +I+E+E KA E+Q+
Sbjct: 481 SLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLRHAIKEQERKAIEDQN 540

Query: 543 PAISQAKRRKKMISNLPKLFDAIFFLFH--KRTVITKEELIYKLVVGNAEIVDKREIEEQ 602
           PAIS AKRR+KMI+ LPKLF+ I +L    +R VITKEEL++K++ G+++I D++E+EEQ
Sbjct: 541 PAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQ 560

Query: 603 LDLLQELVPEWISEKLASSDDVLVCIEKLSSASTVRARLEE 629
           L LLQE+VPEW+SEK +SS DVLVCI KL+S  T+R+RLEE
Sbjct: 601 LILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLEE 560

[Close]

BLAST of Sed0018460 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B )

HSP 1 Score: 217.6 bits (553), Expect = 2.8e-56
Identity = 188/562 (33.45%), Postives = 271/562 (48.22%), Query Frame = 0


Query: 107 SKPSVDNSKILSEKFEILSKFFDSLDSAMRLLRFKGVASNFSNVCPKIEVLTDRRFSYGH 166
           S P  ++   L E+FEIL +FF+ LD+A+RLL+ KG ++ ++N+CPKIE LT+R FSY H
Sbjct: 36  SSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSYDH 95

Query: 167 LAQLKFILPEAIELKKVHIVDERTSCSKPDLHISFNFSVLDNQDDLDLGDRNMQLRKLFK 226
           LAQ+K I PEAIELK+V    E T C KP LHI  N   +  +D +  G + M+LRK+F 
Sbjct: 96  LAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTI-CGTKYMELRKVFH 155

Query: 227 ARLLEFVNSHPEIDDVPKDLLPKPFNFPSQDNIVQTNTPAISSTTNVIEEIPFNHHPEES 286
           ++L++F  +HP+ D++PK+LLP+PFN P +D+   +   ++      +E   F+ H EE 
Sbjct: 156 SKLVDFRKAHPK-DEIPKELLPEPFNSPQRDS--YSGIVSVGLGEPKLEVGGFDVHMEE- 215

Query: 287 QGFRIVKSMVPMMATSSSIQKEFIGASHFSQSLSRRFSRKVVNRETESTDLATKLCVQSS 346
                             I++E                                      
Sbjct: 216 ------------------IEQE-------------------------------------- 275

Query: 347 SHSDVETIIDTNIYNAVSSSKLFSPVKLPSNPTYNSSCLDNYASPIRSSSLPLPTTPSNM 406
              DV  +I  +  + + S  + +PVK                                 
Sbjct: 276 -EQDVNKVIPDSTLSHIESRIVETPVK--------------------------------- 335

Query: 407 ADRVTMTKEGDVVSAKTSDINSTPAKLVSTPARLMASTPAMRPPKRS-SMSPE---EDSS 466
                             D+ STP+K +STP RLM++TP ++  KR   ++PE   ++S 
Sbjct: 336 ------------------DL-STPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSL 395

Query: 467 FSTNKLIRRPPRSRSLVFDTPTKEDKNEDEIDGTSRASFGDDLLGVLPLSLLQSIR---- 526
            STN L R P  SRSL FDT  ++   +D+I   S     D  +      LLQS++    
Sbjct: 396 RSTNSLARGP--SRSLNFDTFEEDAIEKDDIGNES----DDKGINYEEDGLLQSVKGPSR 455

Query: 527 -------EKEIKAKEEQSPAISQAKRR-------------KKMIS---------NLPKLF 586
                  E+E   K++ S      K               + MI          NLP+L 
Sbjct: 456 SLNFDTLEEETIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLV 477

Query: 587 DAIFFLFH--KRTVITKEELIYKLVVGNAEIVDKREIEEQLDLLQELVPEWISEKLASSD 630
           + I  +FH   RTVITKEEL+YK++     I D+RE+EEQL L+ +LVP+WISE  ASS 
Sbjct: 516 NLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISETKASSG 477

The following BLAST results are available for this feature:

BLAST of Sed0018460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553630.1	1.5e-216	70.61	CDT1-like protein b [Cucurbita pepo subsp. pepo]	[more]
XP_022963958.1	1.6e-215	70.22	CDT1-like protein b [Cucurbita moschata]	[more]
XP_022146049.1	2.1e-215	68.95	CDT1-like protein b [Momordica charantia]	[more]
KAG6571515.1	3.6e-215	70.06	CDT1-like protein a, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022967387.1	3.1e-214	69.75	CDT1-like protein b [Cucurbita maxima]	[more]

BLAST of Sed0018460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJW9	3.3e-78	36.51	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1...	[more]
Q9M1S9	4.0e-55	33.45	CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1	[more]

BLAST of Sed0018460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJE5	7.9e-216	70.22	CDT1-like protein b OS=Cucurbita moschata OX=3662 GN=LOC111464103 PE=3 SV=1	[more]
A0A6J1CX08	1.0e-215	68.95	CDT1-like protein b OS=Momordica charantia OX=3673 GN=LOC111015352 PE=3 SV=1	[more]
A0A6J1HQP8	1.5e-214	69.75	CDT1-like protein b OS=Cucurbita maxima OX=3661 GN=LOC111466932 PE=3 SV=1	[more]
A0A5D3DKW1	1.7e-189	63.64	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G0...	[more]
A0A1S3C211	1.7e-189	63.64	CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=3 SV=1	[more]

BLAST of Sed0018460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31270.1	2.4e-79	36.51	homolog of yeast CDT1 A	[more]
AT3G54710.1	2.8e-56	33.45	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 581..601
None	No IPR available	COILS	Coil	Coil	coord: 81..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..497
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 480..497
None	No IPR available	PANTHER	PTHR28637	DNA REPLICATION FACTOR CDT1	coord: 25..611
None	No IPR available	CDD	cd08767	Cdt1_c	coord: 515..611 e-value: 6.05281E-28 score: 106.598
None	No IPR available	CDD	cd08674	Cdt1_m	coord: 117..250 e-value: 1.30414E-36 score: 133.204
IPR014939	CDT1 Geminin-binding domain-like	SMART	SM01075	CDT1_2	coord: 117..249 e-value: 4.7E-21 score: 85.9
IPR014939	CDT1 Geminin-binding domain-like	PFAM	PF08839	CDT1	coord: 120..236 e-value: 1.1E-10 score: 42.2
IPR038090	DNA replication factor Cdt1, C-terminal WH domain superfamily	GENE3D	1.10.10.1420		coord: 503..612 e-value: 2.1E-26 score: 94.2
IPR032054	DNA replication factor Cdt1, C-terminal	PFAM	PF16679	CDT1_C	coord: 512..602 e-value: 5.3E-18 score: 65.3
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 113..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018460.1	Sed0018460.1	mRNA
Sed0018460.2	Sed0018460.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000076	DNA replication checkpoint signaling
biological_process	GO:0071163	DNA replication preinitiation complex assembly
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0070182	DNA polymerase binding