Sed0018450 (gene) Chayote v1

Overview


Name	Sed0018450
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Stress-induced protein KIN2-like
Location	LG01: 64792025 .. 64792666 (-)
RNA-Seq Expression	Sed0018450
Synteny	Sed0018450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAATTCTCAAAATTTGAGCTTTCAAGCTGGAGAAACCAAAGGCCAAGCACAGGTTCAATTCTAATCTTTGCCATCTTTATATTTATGTTTAGCTCATGACATTATTTTATGTAATTATTTCATACTTTTTTTTTTTTTTGAGATTACAACAATTAGGGGTGGGGGAGACTCGAACCTAAGACCTCTTGGTCGTTAGATGTACACTGGTGCCGTTTGAGCTACAGCTCGATTGGCAATTATTTCATACTTTGGCTTATCATATATAAGTAGTATATTTATCTTAATATTATCTTTCATGAGTGAATATCTACCTTCTTAATCATCATCGAGTGACTCAATTGATCAATGAGCGTTTTATGGTGTTTAAAGTGATGAGTTCAATCCATGATAGTCACGTACCTAGAAATCATTTCCTACGAATTTTCTTCGCATCCAAATATTGTGGAGTCTGACGGTATATTCCGTGTAACAAATTAAATGCTTTATATAGGAGAAGGCGAGCAATATGATGGACAAAGTAAATAATGCAGCCCAATCAGCCAAAGAATCAATGCAAGAGGCCGGACAACAAATGCAAGCCAAAGCACAGGGTGCGGCTGATAGTGTCAAAGACGCCACTGGCATGAACAAATAA

mRNA sequence

ATGGCAGACAATTCTCAAAATTTGAGCTTTCAAGCTGGAGAAACCAAAGGCCAAGCACAGGAGAAGGCGAGCAATATGATGGACAAAGTAAATAATGCAGCCCAATCAGCCAAAGAATCAATGCAAGAGGCCGGACAACAAATGCAAGCCAAAGCACAGGGTGCGGCTGATAGTGTCAAAGACGCCACTGGCATGAACAAATAA

Coding sequence (CDS)

ATGGCAGACAATTCTCAAAATTTGAGCTTTCAAGCTGGAGAAACCAAAGGCCAAGCACAGGAGAAGGCGAGCAATATGATGGACAAAGTAAATAATGCAGCCCAATCAGCCAAAGAATCAATGCAAGAGGCCGGACAACAAATGCAAGCCAAAGCACAGGGTGCGGCTGATAGTGTCAAAGACGCCACTGGCATGAACAAATAA

Protein sequence

MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVKDATGMNK

Homology

[Close]

BLAST of Sed0018450 vs. NCBI nr
Match: XP_021680025.1 (stress-induced protein KIN2-like [Hevea brasiliensis])

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQ +S+ AGE KGQAQEKASNM+D+ +NAAQSAKES+QEAGQQMQAKAQGAAD+VK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMVDRASNAAQSAKESVQEAGQQMQAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. NCBI nr
Match: XP_008341834.1 (stress-induced protein KIN2-like [Malus domestica] >XP_008341836.1 stress-induced protein KIN2-like [Malus domestica] >XP_009373725.1 PREDICTED: stress-induced protein KIN2-like [Pyrus x bretschneideri] >XP_009373726.1 PREDICTED: stress-induced protein KIN2-like [Pyrus x bretschneideri] >KAB2610412.1 stress-induced protein KIN2-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQ +S+QAGE KGQAQEKAS MMDK NNAAQSAKE+MQ+AGQ MQAKAQGAAD+VK
Sbjct: 1  MADNSQKMSYQAGEAKGQAQEKASGMMDKANNAAQSAKETMQDAGQNMQAKAQGAADAVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Sed0018450 vs. NCBI nr
Match: XP_042977360.1 (stress-induced protein KIN2-like [Carya illinoinensis] >KAG2710003.1 hypothetical protein I3760_04G005400 [Carya illinoinensis] >KAG6656200.1 hypothetical protein CIPAW_04G005500 [Carya illinoinensis] >KAG6715658.1 hypothetical protein I3842_04G005500 [Carya illinoinensis] >KAG7981621.1 hypothetical protein I3843_04G005300 [Carya illinoinensis])

HSP 1 Score: 101.3 bits (251), Expect = 3.4e-18
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQNLSFQAGETKGQAQEKASNM+DK  +AAQS KES+QE G QM+AKAQGAA SVK
Sbjct: 1  MADNSQNLSFQAGETKGQAQEKASNMLDKAADAAQSTKESIQETGSQMKAKAQGAAGSVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. NCBI nr
Match: XP_042977361.1 (stress-induced protein KIN2-like [Carya illinoinensis] >KAG2710002.1 hypothetical protein I3760_04G005300 [Carya illinoinensis] >KAG6656199.1 hypothetical protein CIPAW_04G005400 [Carya illinoinensis] >KAG6715657.1 hypothetical protein I3842_04G005400 [Carya illinoinensis] >KAG7981620.1 hypothetical protein I3843_04G005200 [Carya illinoinensis])

HSP 1 Score: 101.3 bits (251), Expect = 3.4e-18
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQNLSFQAGETKGQAQEKAS+MMDK  +AAQS KES+QE G QM+AKAQGAA SVK
Sbjct: 1  MADNSQNLSFQAGETKGQAQEKASSMMDKATDAAQSTKESIQETGSQMKAKAQGAAGSVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 3.4e-18
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQN+S+Q GE KGQAQEKASNMM+K ++AAQSAKES+QE GQQM+AKAQGAAD+VK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. ExPASy Swiss-Prot
Match: P18612 (Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.7e-04
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          M++ ++N +FQAG+T G+A+EK++ ++DK  +AA  A    Q+AG+ +   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVK 60

Query: 61 DATGMNK 68
          D TG+NK
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of Sed0018450 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-04
Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          M++ ++N +FQAG+  G+A+EK++ ++DK  +AA +A  S Q+AG+ +   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVK 60

Query: 61 DATGMNK 68
          D TG+NK
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of Sed0018450 vs. ExPASy TrEMBL
Match: A0A5N5GAF4 (Stress-induced protein KIN2-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_018444 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.3e-19
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQ +S+QAGE KGQAQEKAS MMDK NNAAQSAKE+MQ+AGQ MQAKAQGAAD+VK
Sbjct: 1  MADNSQKMSYQAGEAKGQAQEKASGMMDKANNAAQSAKETMQDAGQNMQAKAQGAADAVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Sed0018450 vs. ExPASy TrEMBL
Match: A0A0A0KPD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQN+S+Q GE KGQAQEKASNMM+K ++AAQSAKES+QE GQQM+AKAQGAAD+VK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. ExPASy TrEMBL
Match: A0A498HEG5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_028409 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18
Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
           MADNSQ +S+ AGE KGQAQEKAS MMDK NNAAQSAKE+MQ+AGQ MQAKAQGAAD+VK
Sbjct: 61  MADNSQKMSYHAGEAKGQAQEKASGMMDKANNAAQSAKETMQDAGQNMQAKAQGAADAVK 120

Query: 61  DATGMNK 68
           +ATGMNK
Sbjct: 121 NATGMNK 127

[Close]

BLAST of Sed0018450 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18
Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQ +S+  GE KGQAQEKASNMMDK ++ AQSAKESMQEAGQQM+AKAQGAAD+VK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          MADNSQ +S+ AGE KGQAQEKASNMMDK ++AAQSAKES+QEAGQQ++AKAQGAAD+VK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Sed0018450 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 90.9 bits (224), Expect = 4.2e-19
Identity = 49/67 (73.13%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          M+ NSQN+SFQAG+ KGQ QEKAS MMDK +NAAQSAKES++E GQQ++ KAQGA +SVK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Sed0018450 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16
Identity = 42/67 (62.69%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          M++NSQ++SF AG+ KGQ QEKASN++DK +NAAQSAKES+QE GQQ++ KAQGA++++K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of Sed0018450 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 6.3e-15
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 3  DNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVKDA 62
          DN QN S+QAG+  GQ +EKA  MMDK  +AA SA++S+Q+ GQQM+ KAQGAAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of Sed0018450 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 46.2 bits (108), Expect = 1.2e-05
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          M++ ++N +FQAG+T G+A+EK++ ++DK  +AA  A    Q+AG+ +   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVK 60

Query: 61 DATGMNK 68
          D TG+NK
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of Sed0018450 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 45.8 bits (107), Expect = 1.6e-05
Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MADNSQNLSFQAGETKGQAQEKASNMMDKVNNAAQSAKESMQEAGQQMQAKAQGAADSVK 60
          M++ ++N +FQAG+  G+A+EK++ ++DK  +AA +A  S Q+AG+ +   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVK 60

Query: 61 DATGMNK 68
          D TG+NK
Sbjct: 61 DKTGLNK 66

The following BLAST results are available for this feature:

BLAST of Sed0018450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_021680025.1	1.2e-18	83.58	stress-induced protein KIN2-like [Hevea brasiliensis]	[more]
XP_008341834.1	1.5e-18	83.58	stress-induced protein KIN2-like [Malus domestica] >XP_008341836.1 stress-induce...	[more]
XP_042977360.1	3.4e-18	85.07	stress-induced protein KIN2-like [Carya illinoinensis] >KAG2710003.1 hypothetica...	[more]
XP_042977361.1	3.4e-18	85.07	stress-induced protein KIN2-like [Carya illinoinensis] >KAG2710002.1 hypothetica...	[more]
XP_004152386.1	3.4e-18	82.09	stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C...	[more]

BLAST of Sed0018450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P18612	1.7e-04	41.79	Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1	[more]
P31169	2.2e-04	41.79	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]

BLAST of Sed0018450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N5GAF4	7.3e-19	83.58	Stress-induced protein KIN2-like OS=Pyrus ussuriensis x Pyrus communis OX=244845...	[more]
A0A0A0KPD4	1.6e-18	82.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1	[more]
A0A498HEG5	2.8e-18	82.09	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_028409 PE=4 SV=1	[more]
A0A5A7TJP0	2.8e-18	82.09	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A6J1E4Q8	2.8e-18	82.09	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]

BLAST of Sed0018450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	4.2e-19	73.13	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	1.5e-16	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	6.3e-15	64.62	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15960.1	1.2e-05	41.79	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]
AT5G15970.1	1.6e-05	41.79	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 2..65 e-value: 4.2E-5 score: 25.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018450.1	Sed0018450.1	mRNA