Sed0018425 (gene) Chayote v1

Overview


Name	Sed0018425
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA damage-repair/toleration protein DRT102
Location	LG06: 6156757 .. 6158242 (-)
RNA-Seq Expression	Sed0018425
Synteny	Sed0018425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTAACAAAAAAACGATAAAAGAAAACGGTGCCGTTTTGTGTCGTAAGAAGCTAATGATGACGCAAAAGCAAAATGATAAAGATAAAAGCTGCGACACAGGACGATTGATCACAACCTTATCGTTTTCTAATCCTCTTTTTCTCCGATCAAAATCTCGCCGCCGATCATGGCAAACCCAGACCCACCTCTCAAAATCATCGCCGGCGCAGACCCCAACGGCAGCGCCCTCAAGGACGCCCTCCTCTCCCACCTCCGCTCCCTCCACATCGCCGTCGAAGACCTCGGCGTCGCCCCCTACTACTCTATCGCCGCCGACGTCGGCCGCCGCATCTCCTCAGCCGCCTCCGCCGACACCCGCGGCCTCGTCGTCTGCGGCACCGGCGTCGGCGTCTCCATCTTCGCCAACAAATTCCCCTCCGTCACCGCAGCCACCTGCCTCACCCAAGACGACGCCCTGAACTCCCGCTCCATCAACAACTCCAACGTCCTCGCCCTCTCCGGCGCCGCCACCTCGCCGGAATCGGCCGTGGAAATCCTCGACACCTGGCTGAAAACCCCCTTCAAATCCCCTTGCCCCGCTTCCAATTTCAAGGCCTGGCCGGACGAAATCGAGTCCTTCCTCGATCAATCCCTAACCGAGATCTCGAAAATCGGGGCGGTTTCGGCTTCGGCTCCGGCTTCGGGGGATAGTTGTTCGATCTGCTGCCTGGTGAAGAACAGGGAGCTGCGTCCGGTGGAGATGATCCCGGGGGGGTCGATGAAGATCCTAAGGGAGACACCGACATCGGCCGTGGTTCGGTTCGAGGCGGGGAGCGTGGAGCCAGCTCATCACCATACATTTGGGCATGACATATTGGTGATGAAAGGGAGGAAGAGTGTTTGGAATTTGAGTAAGGAGGAGAGGTTTGATTTGGGGGTTGGGGATTACTTGTTTACTCCTGGTGGGGATGTTCACAGGGTTAAGTATTATGAAGAGACTGAGTTTTTTATCAAGTGGGATGGGGCTTGGGATATGTTCTTTGATGAAGATCTTCAAGTTGCTAAGAACGCCATTGATGAGGAGCTCCAGAAAGACAAGCTTTCTTCATGATAACAGATGGTTTCTGCATATTTATGAATTACGTAATGATCTTGGGTGATTTGGGTGTTGTGAGTTGTGTTTCATTCATGTGATTTCTTTTTTGTGGAAGTTGCAAGTTAATAGCCTCAATTTAATTTTGGTCTGTCAATTTAGTTTCATGACTTGATTTACTGCAATTTACCTTGCCATCGGAGAGGAATAGGATCAAGGGATTTCTATCAAATCCCTTATCAAAGACAGCATCTATCCTCCTATTCATGCATGAATCTGTTAGGGTGTGTTTGCGCCCTCGTTTATGTAAACAGTTGGGTTGGTTATAATAACTCAACCGATGCTTGCTCCATCGTTTATTATAAACCGTGATTACCTAAACCTACGTGTTCGTTTATCTAAACTTACGTG

mRNA sequence

CCTCTAACAAAAAAACGATAAAAGAAAACGGTGCCGTTTTGTGTCGTAAGAAGCTAATGATGACGCAAAAGCAAAATGATAAAGATAAAAGCTGCGACACAGGACGATTGATCACAACCTTATCGTTTTCTAATCCTCTTTTTCTCCGATCAAAATCTCGCCGCCGATCATGGCAAACCCAGACCCACCTCTCAAAATCATCGCCGGCGCAGACCCCAACGGCAGCGCCCTCAAGGACGCCCTCCTCTCCCACCTCCGCTCCCTCCACATCGCCGTCGAAGACCTCGGCGTCGCCCCCTACTACTCTATCGCCGCCGACGTCGGCCGCCGCATCTCCTCAGCCGCCTCCGCCGACACCCGCGGCCTCGTCGTCTGCGGCACCGGCGTCGGCGTCTCCATCTTCGCCAACAAATTCCCCTCCGTCACCGCAGCCACCTGCCTCACCCAAGACGACGCCCTGAACTCCCGCTCCATCAACAACTCCAACGTCCTCGCCCTCTCCGGCGCCGCCACCTCGCCGGAATCGGCCGTGGAAATCCTCGACACCTGGCTGAAAACCCCCTTCAAATCCCCTTGCCCCGCTTCCAATTTCAAGGCCTGGCCGGACGAAATCGAGTCCTTCCTCGATCAATCCCTAACCGAGATCTCGAAAATCGGGGCGGTTTCGGCTTCGGCTCCGGCTTCGGGGGATAGTTGTTCGATCTGCTGCCTGGTGAAGAACAGGGAGCTGCGTCCGGTGGAGATGATCCCGGGGGGGTCGATGAAGATCCTAAGGGAGACACCGACATCGGCCGTGGTTCGGTTCGAGGCGGGGAGCGTGGAGCCAGCTCATCACCATACATTTGGGCATGACATATTGGTGATGAAAGGGAGGAAGAGTGTTTGGAATTTGAGTAAGGAGGAGAGGTTTGATTTGGGGGTTGGGGATTACTTGTTTACTCCTGGTGGGGATGTTCACAGGGTTAAGTATTATGAAGAGACTGAGTTTTTTATCAAGTGGGATGGGGCTTGGGATATGTTCTTTGATGAAGATCTTCAAGTTGCTAAGAACGCCATTGATGAGGAGCTCCAGAAAGACAAGCTTTCTTCATGATAACAGATGGTTTCTGCATATTTATGAATTACGTAATGATCTTGGGTGATTTGGGTGTTGTGAGTTGTGTTTCATTCATGTGATTTCTTTTTTGTGGAAGTTGCAAGTTAATAGCCTCAATTTAATTTTGGTCTGTCAATTTAGTTTCATGACTTGATTTACTGCAATTTACCTTGCCATCGGAGAGGAATAGGATCAAGGGATTTCTATCAAATCCCTTATCAAAGACAGCATCTATCCTCCTATTCATGCATGAATCTGTTAGGGTGTGTTTGCGCCCTCGTTTATGTAAACAGTTGGGTTGGTTATAATAACTCAACCGATGCTTGCTCCATCGTTTATTATAAACCGTGATTACCTAAACCTACGTGTTCGTTTATCTAAACTTACGTG

Coding sequence (CDS)

ATGGCAAACCCAGACCCACCTCTCAAAATCATCGCCGGCGCAGACCCCAACGGCAGCGCCCTCAAGGACGCCCTCCTCTCCCACCTCCGCTCCCTCCACATCGCCGTCGAAGACCTCGGCGTCGCCCCCTACTACTCTATCGCCGCCGACGTCGGCCGCCGCATCTCCTCAGCCGCCTCCGCCGACACCCGCGGCCTCGTCGTCTGCGGCACCGGCGTCGGCGTCTCCATCTTCGCCAACAAATTCCCCTCCGTCACCGCAGCCACCTGCCTCACCCAAGACGACGCCCTGAACTCCCGCTCCATCAACAACTCCAACGTCCTCGCCCTCTCCGGCGCCGCCACCTCGCCGGAATCGGCCGTGGAAATCCTCGACACCTGGCTGAAAACCCCCTTCAAATCCCCTTGCCCCGCTTCCAATTTCAAGGCCTGGCCGGACGAAATCGAGTCCTTCCTCGATCAATCCCTAACCGAGATCTCGAAAATCGGGGCGGTTTCGGCTTCGGCTCCGGCTTCGGGGGATAGTTGTTCGATCTGCTGCCTGGTGAAGAACAGGGAGCTGCGTCCGGTGGAGATGATCCCGGGGGGGTCGATGAAGATCCTAAGGGAGACACCGACATCGGCCGTGGTTCGGTTCGAGGCGGGGAGCGTGGAGCCAGCTCATCACCATACATTTGGGCATGACATATTGGTGATGAAAGGGAGGAAGAGTGTTTGGAATTTGAGTAAGGAGGAGAGGTTTGATTTGGGGGTTGGGGATTACTTGTTTACTCCTGGTGGGGATGTTCACAGGGTTAAGTATTATGAAGAGACTGAGTTTTTTATCAAGTGGGATGGGGCTTGGGATATGTTCTTTGATGAAGATCTTCAAGTTGCTAAGAACGCCATTGATGAGGAGCTCCAGAAAGACAAGCTTTCTTCATGA

Protein sequence

MANPDPPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAASADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSICCLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVWNLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEELQKDKLSS

Homology

[Close]

BLAST of Sed0018425 vs. NCBI nr
Match: XP_023529962.1 (DNA damage-repair/toleration protein DRT102 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.3 bits (1266), Expect = 3.1e-135
Identity = 244/303 (80.53%), Postives = 269/303 (88.78%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPLKIIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLKIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTPNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFLD SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLDNSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           CLVKNREL P EMIPGGSMKILRETPTSAVVRFEAGS+EPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CLVKNRELNPFEMIPGGSMKILRETPTSAVVRFEAGSMEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLFTPAGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. NCBI nr
Match: KAG7022206.1 (DNA damage-repair/toleration protein DRT-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.5 bits (1264), Expect = 5.3e-135
Identity = 244/303 (80.53%), Postives = 269/303 (88.78%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPLKIIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLKIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTHNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFLD SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLDNSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           CLVKNREL PVEMIPGGSMKILRE PTSAVV+FEAGSVEPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CLVKNRELNPVEMIPGGSMKILREMPTSAVVQFEAGSVEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLFTPAGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. NCBI nr
Match: XP_023001932.1 (DNA damage-repair/toleration protein DRT102 [Cucurbita maxima])

HSP 1 Score: 490.7 bits (1262), Expect = 9.0e-135
Identity = 243/303 (80.20%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPL IIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLNIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTPNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFLD SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLDNSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           CLVKNREL PVEMIPGGSMKILRETPTSAVVRFE GSVEPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CLVKNRELNPVEMIPGGSMKILRETPTSAVVRFETGSVEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYL+TP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLYTPAGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. NCBI nr
Match: KAG6588354.1 (DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.3 bits (1261), Expect = 1.2e-134
Identity = 244/303 (80.53%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPLKIIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLKIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTHNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFLD SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLDNSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           CLVKNREL PVEMIPGGSMKILRE PTSAVVRFEAGSVEPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CLVKNRELNPVEMIPGGSMKILREMPTSAVVRFEAGSVEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFF EDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLFTPAGDVHRVKYYEDTEFFIKWDGHWDMFFGEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. NCBI nr
Match: XP_022933745.1 (DNA damage-repair/toleration protein DRT102 [Cucurbita moschata])

HSP 1 Score: 488.8 bits (1257), Expect = 3.4e-134
Identity = 243/303 (80.20%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPLKIIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLKIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTPNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFL+ SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLENSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           C VKNREL PVEMIPG SMKILRETPTSAVVRFEAGSVEPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CPVKNRELNPVEMIPGASMKILRETPTSAVVRFEAGSVEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLFTPAGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. ExPASy Swiss-Prot
Match: Q05212 (DNA damage-repair/toleration protein DRT102 OS=Arabidopsis thaliana OX=3702 GN=DRT102 PE=1 SV=2)

HSP 1 Score: 413.7 bits (1062), Expect = 1.8e-114
Identity = 199/301 (66.11%), Postives = 245/301 (81.40%), Query Frame = 0


Query: 5   DPPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAASADTR 64
           D PLKII GAD  G++LKDA+++HLRSL I VED GV+ YYS  ++VGRR+S+++S++ R
Sbjct: 9   DQPLKIITGADDFGASLKDAMVTHLRSLGIDVEDTGVSSYYSAGSEVGRRVSASSSSEVR 68

Query: 65  GLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVEIL 124
           GLV CGTGVGV++FANKFP V AATCL+ +DA+N+RSI+N NVLA SG  TSPE+A+EI 
Sbjct: 69  GLVCCGTGVGVAMFANKFPGVYAATCLSVEDAVNARSISNCNVLAFSGIKTSPETALEIF 128

Query: 125 DTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGD------SCSI 184
           D W+KTPFKSPCPAS  + W   I SFLD SL+E+S+IG  +A    +        SC I
Sbjct: 129 DAWIKTPFKSPCPASGSEPWSSVISSFLDNSLSEMSQIGKSTAGDSTTKKIDETTASCVI 188

Query: 185 CCLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSV 244
           CCL KNRE  PV+++PGGSMKI+RETPTSA+VRF+AGSVEPAHHHTFGHD++V+KG+KSV
Sbjct: 189 CCLAKNREFTPVDIMPGGSMKIVRETPTSAIVRFKAGSVEPAHHHTFGHDLVVIKGKKSV 248

Query: 245 WNLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDE 300
           WNLSK+ER DL  GDYLFTP GDVHRVKY+E+TEFFI WDG WD+F DEDL+ AK AI+E
Sbjct: 249 WNLSKKERADLVDGDYLFTPAGDVHRVKYHEDTEFFITWDGHWDIFLDEDLETAKKAIEE 308

[Close]

BLAST of Sed0018425 vs. ExPASy Swiss-Prot
Match: Q92EU5 (Ribose-5-P isomerase B OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=rpiB PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.5e-11
Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 0


Query: 8   LKIIAGADPNGSALKDALLSHLRSLHIAVEDLG-----VAPYYSIAADVGRRISSAASAD 67
           +KI  G D  G  LK  L++ L+  +I   D G        Y SIA  V   + +  +  
Sbjct: 1   MKIAIGCDEMGYELKQTLITRLKEKNIEFTDFGSFENEKVLYPSIAEKVALEVKN--NDY 60

Query: 68  TRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVE 127
            RG+++CGTG+G++I ANK   + AA       A  +R  N+++++ +      P  AV 
Sbjct: 61  DRGILICGTGIGMAITANKIHGIRAAQIHDSYSAERARKSNDAHIMTMGALVIGPSLAVS 120

Query: 128 ILDTWLKTPF 133
           +LDTWL + F
Sbjct: 121 LLDTWLDSDF 128

[Close]

BLAST of Sed0018425 vs. ExPASy Swiss-Prot
Match: Q6D8V9 (D-erythrulose-4-phosphate isomerase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=derI PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-10
Identity = 43/132 (32.58%), Postives = 61/132 (46.21%), Query Frame = 0


Query: 8   LKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAP------YYSIAADVGRRISSAASA 67
           L I  GAD     LK+ +  +L+   + V D    P      Y  +A  +   I      
Sbjct: 2   LSIAIGADSAAIDLKNTITDYLQQKGLTVTDYSYDPTGENPIYPDVAYTLAHAIKD--GK 61

Query: 68  DTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAV 127
             RG+++CGTG+G+ I ANK   + AA C     A  +R  NN+ V+AL      PE A 
Sbjct: 62  HQRGILLCGTGIGMCIVANKVNGIRAAQCHDTYSAQRARKSNNAQVIALGARVIGPELAK 121

Query: 128 EILDTWLKTPFK 134
           EI+  WL   F+
Sbjct: 122 EIIGAWLDAEFE 131

[Close]

BLAST of Sed0018425 vs. ExPASy Swiss-Prot
Match: P37351 (Ribose-5-phosphate isomerase B OS=Escherichia coli (strain K12) OX=83333 GN=rpiB PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-09
Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 9   KIIAGADPNGSALKDALLSHLRSLHIAVEDLGV-----APYYSIAADVGRRISSAASADT 68
           KI  G D  G  LK  +++HL    + V D G        Y   A+ V   ++ A     
Sbjct: 3   KIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVA--LAVAGGEVD 62

Query: 69  RGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVEI 128
            G+++CGTGVG+SI ANKF  + A  C     A  SR  N++NVLA        E A  I
Sbjct: 63  GGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMI 122

Query: 129 LDTWLKTPFK 134
           +D WL   ++
Sbjct: 123 VDAWLGAQYE 130

[Close]

BLAST of Sed0018425 vs. ExPASy Swiss-Prot
Match: P47636 (Probable ribose-5-phosphate isomerase B OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=rpiB PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-09
Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 10  IIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAAD--------VGRRISSAASA 69
           I   +D  G  LK  +  HL++    V DLG  P Y  A D        V  ++   +  
Sbjct: 5   IFIASDHTGLTLKKIISEHLKTKQFNVVDLG--PNYFDANDDYPDFAFLVADKVKKNSDK 64

Query: 70  DTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAV 129
           D  G+++CGTGVGV + ANK   V AA  +++  A  +R  +N+NVL LS    +    +
Sbjct: 65  DL-GILICGTGVGVCMAANKVKGVLAALVVSEKTAALARQHDNANVLCLSSRFVTDSENI 124

Query: 130 EILDTWLKTPFK 134
           +I+D +LK  F+
Sbjct: 125 KIVDDFLKANFE 133

[Close]

BLAST of Sed0018425 vs. ExPASy TrEMBL
Match: A0A6J1KI10 (DNA damage-repair/toleration protein DRT102 OS=Cucurbita maxima OX=3661 GN=LOC111495958 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 4.4e-135
Identity = 243/303 (80.20%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPL IIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLNIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTPNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFLD SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLDNSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           CLVKNREL PVEMIPGGSMKILRETPTSAVVRFE GSVEPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CLVKNRELNPVEMIPGGSMKILRETPTSAVVRFETGSVEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYL+TP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLYTPAGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. ExPASy TrEMBL
Match: A0A6J1F5P5 (DNA damage-repair/toleration protein DRT102 OS=Cucurbita moschata OX=3662 GN=LOC111441070 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.7e-134
Identity = 243/303 (80.20%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 6   PPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAA------ 65
           PPLKIIAGAD  G +LKD LLSHLRSL+I VEDLGV+ YYSIAA+VGRR+S+AA      
Sbjct: 4   PPLKIIAGADSFGCSLKDTLLSHLRSLNIPVEDLGVSSYYSIAAEVGRRVSAAATTPNSQ 63

Query: 66  SADTRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPES 125
           S + RGL+ CGTGVGVSIFANKFP+VTAATCLT+DDALNSRSINNSNVL+LSG ATSP+S
Sbjct: 64  SPEIRGLLACGTGVGVSIFANKFPAVTAATCLTKDDALNSRSINNSNVLSLSGIATSPDS 123

Query: 126 AVEILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSIC 185
           AVEIL+TWL+TPFK+PCPAS F  WP EI+SFL+ SLTEI KIGAV A      D+CSIC
Sbjct: 124 AVEILNTWLQTPFKAPCPASQFNPWPTEIQSFLENSLTEIPKIGAVGAVT----DTCSIC 183

Query: 186 CLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVW 245
           C VKNREL PVEMIPG SMKILRETPTSAVVRFEAGSVEPAHHHTFGHD++VMKG+KSVW
Sbjct: 184 CPVKNRELNPVEMIPGASMKILRETPTSAVVRFEAGSVEPAHHHTFGHDLVVMKGKKSVW 243

Query: 246 NLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEE 303
           NLSK+ERFDLGVGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AKNAIDEE
Sbjct: 244 NLSKKERFDLGVGDYLFTPAGDVHRVKYYEDTEFFIKWDGHWDMFFDEDLEAAKNAIDEE 302

[Close]

BLAST of Sed0018425 vs. ExPASy TrEMBL
Match: A0A2I4GPL8 (DNA damage-repair/toleration protein DRT102-like OS=Juglans regia OX=51240 GN=LOC109009710 PE=4 SV=2)

HSP 1 Score: 461.8 bits (1187), Expect = 2.2e-126
Identity = 219/294 (74.49%), Postives = 260/294 (88.44%), Query Frame = 0


Query: 7   PLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAASADTRGL 66
           P KIIAGAD  G ALKD L+SHLRSL+I VEDLG + YYSIAA+VGRR+SS  S+DTRGL
Sbjct: 14  PHKIIAGADSFGCALKDTLVSHLRSLNIDVEDLGTSSYYSIAAEVGRRVSSEKSSDTRGL 73

Query: 67  VVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVEILDT 126
           V CGTGVGVSIFANKFP V AATCLT D+ALN+RSINNSNVLA+SG +TSP+SA+EIL++
Sbjct: 74  VACGTGVGVSIFANKFPGVFAATCLTPDEALNARSINNSNVLAVSGMSTSPDSAIEILNS 133

Query: 127 WLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSICCLVKNRE 186
           WL TPFK+PCPAS  K WP++I+SFLD SL+EI KIG+ S S P S  +C+ICCLVKNRE
Sbjct: 134 WLDTPFKAPCPASGSKPWPEDIQSFLDNSLSEIPKIGSESQSDPDSTATCAICCLVKNRE 193

Query: 187 LRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVWNLSKEER 246
           L P+++IPGGSMKILRE+PTSA+VRF+AGSVEPAHHHTFGHD++V++G+KSVWNL+K+E+
Sbjct: 194 LNPIDLIPGGSMKILRESPTSAIVRFKAGSVEPAHHHTFGHDLVVLEGKKSVWNLTKKEK 253

Query: 247 FDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEEL 301
           +DL VGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL  AK A+++EL
Sbjct: 254 YDLVVGDYLFTPAGDVHRVKYYEDTEFFIKWDGKWDMFFDEDLAAAKTAVEKEL 307

[Close]

BLAST of Sed0018425 vs. ExPASy TrEMBL
Match: A0A1Q3CLQ6 (LacAB_rpiB domain-containing protein/Cupin_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24639 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 7.0e-125
Identity = 220/302 (72.85%), Postives = 258/302 (85.43%), Query Frame = 0


Query: 4   PDPPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAASADT 63
           P  PLKIIAGAD  G+ALKD L++HLRSL+I V+DLG + YYSIAA+VGRR+SSA+SAD 
Sbjct: 12  PPRPLKIIAGADGFGAALKDTLVAHLRSLNIEVDDLGTSSYYSIAAEVGRRVSSASSADI 71

Query: 64  RGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVEI 123
           RGLV CGTGVGVSIFANKFP V AATCL+ DDA NSRSINN NVLA+SG +TS +S +EI
Sbjct: 72  RGLVACGTGVGVSIFANKFPGVFAATCLSPDDAKNSRSINNCNVLAVSGKSTSEDSGIEI 131

Query: 124 LDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASA--PASGDSCSICCL 183
           LDTWL TPFK+PCPAS FK W +EI  FLD SLTE+  IG ++++    +S DSC+ICCL
Sbjct: 132 LDTWLNTPFKAPCPASGFKPWDEEISCFLDSSLTEMPNIGNINSNVDNESSSDSCAICCL 191

Query: 184 VKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVWNL 243
           VK+REL P+EMIPGGSMKI+RE+PTSA+VRF+AGSVEPAHHHTFGHD++VM+G+KSVWNL
Sbjct: 192 VKDRELNPIEMIPGGSMKIVRESPTSAIVRFKAGSVEPAHHHTFGHDLVVMQGKKSVWNL 251

Query: 244 SKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEELQ 303
           SK+ R+DL VGDYLFTP GDVHRVKY+E+TEFFIKWDG WDMFFDED   A  AI+EEL 
Sbjct: 252 SKKHRYDLVVGDYLFTPAGDVHRVKYHEDTEFFIKWDGHWDMFFDEDFDTANKAIEEELV 311

[Close]

BLAST of Sed0018425 vs. ExPASy TrEMBL
Match: A0A2P6R658 (Putative ribose-5-phosphate isomerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0451931 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.5e-124
Identity = 219/301 (72.76%), Postives = 259/301 (86.05%), Query Frame = 0


Query: 7   PLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAASA----D 66
           PLKIIAGAD  G +LKDAL+SHLRSL+I VEDLG + YYSIAADVGRR+SS++SA    +
Sbjct: 12  PLKIIAGADSFGCSLKDALVSHLRSLNIDVEDLGTSSYYSIAADVGRRVSSSSSAAADTE 71

Query: 67  TRGLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVE 126
           TRGLV CGTGVGV+IFANKFP V AATCL+  DALN+RSINNSNVLA+SG +T+PESA+E
Sbjct: 72  TRGLVACGTGVGVAIFANKFPGVFAATCLSPSDALNARSINNSNVLAVSGKSTAPESAIE 131

Query: 127 ILDTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGDSCSICCLV 186
           ILDTWL TPFK+PCPAS  K WP+EI SFLD S+ ++ +IG   A +     SCSICCLV
Sbjct: 132 ILDTWLNTPFKAPCPASESKPWPEEISSFLDNSMNDMPQIG---ADSDLKESSCSICCLV 191

Query: 187 KNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSVWNLS 246
           KNR L P+++IPGGSMKILRE+PTSA+VRF+AGSVEPAHHHTFGHD++VM+G+KSVWNL+
Sbjct: 192 KNRNLNPIDIIPGGSMKILRESPTSAIVRFKAGSVEPAHHHTFGHDLVVMEGKKSVWNLT 251

Query: 247 KEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDEELQK 304
           K+ERFDL VGDYLFTP GDVHRVKYYE+TEFFIKWDG WDMFFDEDL+ AK A+D+ L+ 
Sbjct: 252 KKERFDLVVGDYLFTPAGDVHRVKYYEDTEFFIKWDGKWDMFFDEDLETAKKAVDQALEN 309

[Close]

BLAST of Sed0018425 vs. TAIR 10
Match: AT3G04880.1 (DNA-damage-repair/toleration protein (DRT102) )

HSP 1 Score: 413.7 bits (1062), Expect = 1.3e-115
Identity = 199/301 (66.11%), Postives = 245/301 (81.40%), Query Frame = 0


Query: 5   DPPLKIIAGADPNGSALKDALLSHLRSLHIAVEDLGVAPYYSIAADVGRRISSAASADTR 64
           D PLKII GAD  G++LKDA+++HLRSL I VED GV+ YYS  ++VGRR+S+++S++ R
Sbjct: 9   DQPLKIITGADDFGASLKDAMVTHLRSLGIDVEDTGVSSYYSAGSEVGRRVSASSSSEVR 68

Query: 65  GLVVCGTGVGVSIFANKFPSVTAATCLTQDDALNSRSINNSNVLALSGAATSPESAVEIL 124
           GLV CGTGVGV++FANKFP V AATCL+ +DA+N+RSI+N NVLA SG  TSPE+A+EI 
Sbjct: 69  GLVCCGTGVGVAMFANKFPGVYAATCLSVEDAVNARSISNCNVLAFSGIKTSPETALEIF 128

Query: 125 DTWLKTPFKSPCPASNFKAWPDEIESFLDQSLTEISKIGAVSASAPASGD------SCSI 184
           D W+KTPFKSPCPAS  + W   I SFLD SL+E+S+IG  +A    +        SC I
Sbjct: 129 DAWIKTPFKSPCPASGSEPWSSVISSFLDNSLSEMSQIGKSTAGDSTTKKIDETTASCVI 188

Query: 185 CCLVKNRELRPVEMIPGGSMKILRETPTSAVVRFEAGSVEPAHHHTFGHDILVMKGRKSV 244
           CCL KNRE  PV+++PGGSMKI+RETPTSA+VRF+AGSVEPAHHHTFGHD++V+KG+KSV
Sbjct: 189 CCLAKNREFTPVDIMPGGSMKIVRETPTSAIVRFKAGSVEPAHHHTFGHDLVVIKGKKSV 248

Query: 245 WNLSKEERFDLGVGDYLFTPGGDVHRVKYYEETEFFIKWDGAWDMFFDEDLQVAKNAIDE 300
           WNLSK+ER DL  GDYLFTP GDVHRVKY+E+TEFFI WDG WD+F DEDL+ AK AI+E
Sbjct: 249 WNLSKKERADLVDGDYLFTPAGDVHRVKYHEDTEFFITWDGHWDIFLDEDLETAKKAIEE 308

The following BLAST results are available for this feature:

BLAST of Sed0018425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529962.1	3.1e-135	80.53	DNA damage-repair/toleration protein DRT102 [Cucurbita pepo subsp. pepo]	[more]
KAG7022206.1	5.3e-135	80.53	DNA damage-repair/toleration protein DRT-like protein, partial [Cucurbita argyro...	[more]
XP_023001932.1	9.0e-135	80.20	DNA damage-repair/toleration protein DRT102 [Cucurbita maxima]	[more]
KAG6588354.1	1.2e-134	80.53	DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022933745.1	3.4e-134	80.20	DNA damage-repair/toleration protein DRT102 [Cucurbita moschata]	[more]

BLAST of Sed0018425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05212	1.8e-114	66.11	DNA damage-repair/toleration protein DRT102 OS=Arabidopsis thaliana OX=3702 GN=D...	[more]
Q92EU5	8.5e-11	32.31	Ribose-5-P isomerase B OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLI...	[more]
Q6D8V9	3.2e-10	32.58	D-erythrulose-4-phosphate isomerase OS=Pectobacterium atrosepticum (strain SCRI ...	[more]
P37351	2.1e-09	34.62	Ribose-5-phosphate isomerase B OS=Escherichia coli (strain K12) OX=83333 GN=rpiB...	[more]
P47636	7.9e-09	33.33	Probable ribose-5-phosphate isomerase B OS=Mycoplasma genitalium (strain ATCC 33...	[more]

BLAST of Sed0018425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI10	4.4e-135	80.20	DNA damage-repair/toleration protein DRT102 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F5P5	1.7e-134	80.20	DNA damage-repair/toleration protein DRT102 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A2I4GPL8	2.2e-126	74.49	DNA damage-repair/toleration protein DRT102-like OS=Juglans regia OX=51240 GN=LO...	[more]
A0A1Q3CLQ6	7.0e-125	72.85	LacAB_rpiB domain-containing protein/Cupin_2 domain-containing protein OS=Cephal...	[more]
A0A2P6R658	3.5e-124	72.76	Putative ribose-5-phosphate isomerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr...	[more]

BLAST of Sed0018425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04880.1	1.3e-115	66.11	DNA-damage-repair/toleration protein (DRT102)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012100	DNA-damage-repair/toleration protein, DRT102	PIRSF	PIRSF011609	DRT102	coord: 1..300 e-value: 1.5E-145 score: 482.2
IPR003500	Sugar-phosphate isomerase, RpiB/LacA/LacB family	PFAM	PF02502	LacAB_rpiB	coord: 10..133 e-value: 2.4E-28 score: 98.9
IPR003500	Sugar-phosphate isomerase, RpiB/LacA/LacB family	PANTHER	PTHR30345	RIBOSE-5-PHOSPHATE ISOMERASE B	coord: 3..299
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 191..304 e-value: 2.4E-15 score: 58.2
IPR036569	Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily	GENE3D	3.40.1400.10		coord: 4..143 e-value: 6.6E-37 score: 128.3
IPR036569	Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily	SUPERFAMILY	89623	Ribose/Galactose isomerase RpiB/AlsB	coord: 6..141
IPR025979	ChrR-like cupin domain	PFAM	PF12973	Cupin_7	coord: 204..276 e-value: 7.9E-7 score: 28.9
None	No IPR available	PANTHER	PTHR30345:SF0	DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT102	coord: 3..299
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 124..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018425.1	Sed0018425.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0016853	isomerase activity