Sed0018413 (gene) Chayote v1

Overview
NameSed0018413
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPre-mRNA-splicing factor SLU7
LocationLG14: 20391276 .. 20392264 (-)
RNA-Seq ExpressionSed0018413
SyntenySed0018413
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGCTCTGTGATTTGTACTCCAAGCGTTGGTTCAAGATAACATATGGCTACTAGATCTAAATCTAAGCTGCATGAGGAAGCCATAAACCCTAACATTCCAAGTTATATTACTTCAACGCCTTGGTATCTCCATGCGAAGGGATCCGTAACGACGAAGGGACCAGTGCGGAGTTTGAAACATCAAAGAAACTGGAAGAAAGCACTTGCAAGTACTCCCTATGATGCAAAAAGGGATCGCTGGAGTGGTTATGATTCTGAAAATTATGCTTGTGATGTGGTCTCGAGATATGAGGCTCGAGATGAAGCAAGAAGCAATTTCTTAAAACAACAAAATCTTCAGAGTCGTGATCATGAAAAAGATGACTTCAAGCTGCTGGTTGGAGCGACGACCCAAACATCAACATTGACGACGGCGACGGCAACAACTTCTTCTCGTGCTCGAAAAGACACACCAACATATCTTTTGAACTTGACGAATTTAAAATCTGCCTATTATAATTCCATATCCAATCCTCCTCCTCCTCCTCTTCCAAACACTCAGAAAAGAATTAGTGGGCCTCAAACACAAGCTGAGTTTCTCAATATGAACTATAAAATTAGTAAAGACATGTTGAAGTCACAAGCCAAGAGTACTACCGATGCTGCTGAGGATATGGTTGTTGTTCCGAAAAGTAAATTCGAGGAGGATGTTTTCGTATATAACCACAGTAGCGTTTGGGGGTCATGGTGGAAAGGCAATCAATGGGGCTACAAGTGCTGTAAACAAACTATACGAAACAGCAACTGCACTGCCGAGCCTGAAATTAAGCCTGTTGAGGAACTCATTTGAGAACACAAAAAGCTGCCTACTCTTAATTTTAGAATTACTATGTAAACTCACTTTTAGATCATAAGCCACATTGCATTTGTTTTATCTTTTTTATTCCATATTAGTTATAGGATTCATTTAACATTCTATGTATGTTGTCTCCATTCTTTTTTGTCAAAC

mRNA sequence

TAAGCTCTGTGATTTGTACTCCAAGCGTTGGTTCAAGATAACATATGGCTACTAGATCTAAATCTAAGCTGCATGAGGAAGCCATAAACCCTAACATTCCAAGTTATATTACTTCAACGCCTTGGTATCTCCATGCGAAGGGATCCGTAACGACGAAGGGACCAGTGCGGAGTTTGAAACATCAAAGAAACTGGAAGAAAGCACTTGCAAGTACTCCCTATGATGCAAAAAGGGATCGCTGGAGTGGTTATGATTCTGAAAATTATGCTTGTGATGTGGTCTCGAGATATGAGGCTCGAGATGAAGCAAGAAGCAATTTCTTAAAACAACAAAATCTTCAGAGTCGTGATCATGAAAAAGATGACTTCAAGCTGCTGGTTGGAGCGACGACCCAAACATCAACATTGACGACGGCGACGGCAACAACTTCTTCTCGTGCTCGAAAAGACACACCAACATATCTTTTGAACTTGACGAATTTAAAATCTGCCTATTATAATTCCATATCCAATCCTCCTCCTCCTCCTCTTCCAAACACTCAGAAAAGAATTAGTGGGCCTCAAACACAAGCTGAGTTTCTCAATATGAACTATAAAATTAGTAAAGACATGTTGAAGTCACAAGCCAAGAGTACTACCGATGCTGCTGAGGATATGGTTGTTGTTCCGAAAAGTAAATTCGAGGAGGATGTTTTCGTATATAACCACAGTAGCGTTTGGGGGTCATGGTGGAAAGGCAATCAATGGGGCTACAAGTGCTGTAAACAAACTATACGAAACAGCAACTGCACTGCCGAGCCTGAAATTAAGCCTGTTGAGGAACTCATTTGAGAACACAAAAAGCTGCCTACTCTTAATTTTAGAATTACTATGTAAACTCACTTTTAGATCATAAGCCACATTGCATTTGTTTTATCTTTTTTATTCCATATTAGTTATAGGATTCATTTAACATTCTATGTATGTTGTCTCCATTCTTTTTTGTCAAAC

Coding sequence (CDS)

ATGGCTACTAGATCTAAATCTAAGCTGCATGAGGAAGCCATAAACCCTAACATTCCAAGTTATATTACTTCAACGCCTTGGTATCTCCATGCGAAGGGATCCGTAACGACGAAGGGACCAGTGCGGAGTTTGAAACATCAAAGAAACTGGAAGAAAGCACTTGCAAGTACTCCCTATGATGCAAAAAGGGATCGCTGGAGTGGTTATGATTCTGAAAATTATGCTTGTGATGTGGTCTCGAGATATGAGGCTCGAGATGAAGCAAGAAGCAATTTCTTAAAACAACAAAATCTTCAGAGTCGTGATCATGAAAAAGATGACTTCAAGCTGCTGGTTGGAGCGACGACCCAAACATCAACATTGACGACGGCGACGGCAACAACTTCTTCTCGTGCTCGAAAAGACACACCAACATATCTTTTGAACTTGACGAATTTAAAATCTGCCTATTATAATTCCATATCCAATCCTCCTCCTCCTCCTCTTCCAAACACTCAGAAAAGAATTAGTGGGCCTCAAACACAAGCTGAGTTTCTCAATATGAACTATAAAATTAGTAAAGACATGTTGAAGTCACAAGCCAAGAGTACTACCGATGCTGCTGAGGATATGGTTGTTGTTCCGAAAAGTAAATTCGAGGAGGATGTTTTCGTATATAACCACAGTAGCGTTTGGGGGTCATGGTGGAAAGGCAATCAATGGGGCTACAAGTGCTGTAAACAAACTATACGAAACAGCAACTGCACTGCCGAGCCTGAAATTAAGCCTGTTGAGGAACTCATTTGA

Protein sequence

MATRSKSKLHEEAINPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWKKALASTPYDAKRDRWSGYDSENYACDVVSRYEARDEARSNFLKQQNLQSRDHEKDDFKLLVGATTQTSTLTTATATTSSRARKDTPTYLLNLTNLKSAYYNSISNPPPPPLPNTQKRISGPQTQAEFLNMNYKISKDMLKSQAKSTTDAAEDMVVVPKSKFEEDVFVYNHSSVWGSWWKGNQWGYKCCKQTIRNSNCTAEPEIKPVEELI
Homology
[Close]
BLAST of Sed0018413 vs. NCBI nr
Match: PPD79477.1 (hypothetical protein GOBAR_DD23591 [Gossypium barbadense])

HSP 1 Score: 155.6 bits (392), Expect = 5.8e-34
Identity = 128/384 (33.33%), Postives = 166/384 (43.23%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K+    P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACENCGAMTHDAKSCMERPRKKGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDAS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTS 193
            YA  V+ RYEARDEAR  +LK+Q    L+ ++ + D+ K +  A  +    TT   +T 
Sbjct: 160 TYA-RVIERYEARDEARRKYLKEQQLKKLEEKNTKVDESKQMDFAKVEKRVRTTGGGSTG 219

Query: 194 S----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG-- 253
           +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG  
Sbjct: 220 TVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDPLPDADPNEKFYEGDNQYRMSGQA 279

Query: 254 ------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA 259
                                     +QAE L  NYK+ K+ LKS+ K T        A 
Sbjct: 280 LEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSKTKDTIMEKYGNAAT 339

[Close]
BLAST of Sed0018413 vs. NCBI nr
Match: PPR84315.1 (hypothetical protein GOBAR_AA36398 [Gossypium barbadense])

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-33
Identity = 127/384 (33.07%), Postives = 166/384 (43.23%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K+    P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACENCGAMTHDAKSCMERPRKKGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDAS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTS 193
            YA  V+ RYEARDEAR  +LK+Q    L+ ++ + D+ K +  A  +    TT   +T 
Sbjct: 160 TYA-RVIERYEARDEARRKYLKEQQLKKLEEKNTKVDESKQMDFAKVEKRVRTTGGGSTG 219

Query: 194 S----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG-- 253
           +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG  
Sbjct: 220 TVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDPLPDADPNEKFYEGDNQYRMSGQA 279

Query: 254 ------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA 259
                                     +QAE L  NYK+ K+ LKS+ K T        A 
Sbjct: 280 LEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSKTKDTIMEKYGNAAT 339

[Close]
BLAST of Sed0018413 vs. NCBI nr
Match: XP_020411368.1 (pre-mRNA-splicing factor SLU7 isoform X4 [Prunus persica])

HSP 1 Score: 151.8 bits (382), Expect = 8.4e-33
Identity = 125/388 (32.22%), Postives = 166/388 (42.78%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK-----------------KALAS 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                 K+   
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSCCGAMTHSAKSCME 99

Query: 74  TP------------------------YDAKRDRWSGYDSENYACDVVSRYEARDEARSNF 133
            P                        YD KRDRW+G+D+  YA  V+ RYEARDEAR  +
Sbjct: 100 RPRKKGAKWTNFHIAPDEKIEMFELDYDGKRDRWNGFDAATYA-RVIERYEARDEARRKY 159

Query: 134 LKQQNLQSRDHEK--------------------------DDFKLLVGATTQTSTLTTATA 193
           LK+Q L+  + +                           D+ K +  A  +    TT   
Sbjct: 160 LKEQQLKKLEEKNNKQNVEEEVSDDDEDNDALKVDEAKVDESKQMDFAKVEKRVRTTGGG 219

Query: 194 TTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRIS 253
           +T +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+S
Sbjct: 220 STGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQYRVS 279

Query: 254 G--------------------------PQTQAEFLNMNYKISKDMLKSQAKST------T 260
           G                            +QAE L  N+K+ KD LKS+ K         
Sbjct: 280 GQALEFKKLNIHAWEAFEKGQDIHMQAAPSQAELLYKNFKVIKDKLKSRMKDAIMEKYGN 339

[Close]
BLAST of Sed0018413 vs. NCBI nr
Match: XP_018434399.1 (PREDICTED: pre-mRNA-splicing factor SLU7-like isoform X1 [Raphanus sativus] >XP_018434586.1 PREDICTED: pre-mRNA-splicing factor SLU7-like isoform X1 [Raphanus sativus])

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-32
Identity = 127/408 (31.13%), Postives = 169/408 (41.42%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A        PV+SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNA------DKPVKSLKHQRKWKVDPNYTKSWYDRGAKTFKADKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K     P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACENCGAMTHKTKLCTERPRKMGAKWTNKNIAPDEKIETFDLDYDGKRDRWNGYDTA 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK------------------------DDF 193
            Y+ +V+ RYEARDEAR NFLK+Q L+  D ++                        D+ 
Sbjct: 160 KYS-EVIKRYEARDEARRNFLKEQQLKKLDKKRDNKIDEEECSDEEEEALKHDEAKADES 219

Query: 194 KLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYN-SISNPPPPPLP 253
           K +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+    +    PLP
Sbjct: 220 KQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDPLP 279

Query: 254 NT-----------QKRISG---------------------------PQTQAEFLNMNYKI 260
           NT           Q R+SG                             +QAE L   YK 
Sbjct: 280 NTDPNEKFYAGDNQYRMSGEALEFKKLNIHALQLSEKGQEEVNMQAAPSQAELLFKKYKD 339

[Close]
BLAST of Sed0018413 vs. NCBI nr
Match: XP_022974492.1 (pre-mRNA-splicing factor SLU7 isoform X1 [Cucurbita maxima] >XP_022974493.1 pre-mRNA-splicing factor SLU7 isoform X2 [Cucurbita maxima] >XP_022974494.1 pre-mRNA-splicing factor SLU7 isoform X3 [Cucurbita maxima] >XP_022974495.1 pre-mRNA-splicing factor SLU7 isoform X4 [Cucurbita maxima] >XP_022975066.1 pre-mRNA-splicing factor SLU7 [Cucurbita maxima])

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-32
Identity = 130/407 (31.94%), Postives = 167/407 (41.03%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIHQADKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K+    P                        YD KRDRW+GYD  
Sbjct: 100 RKGACENCGALTHDAKSCMERPRKIGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDPA 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL------ 193
            YA  V+ RYEARDEAR NFLK+Q L+                  D ++DD K+      
Sbjct: 160 TYA-RVIERYEARDEARRNFLKEQQLKKLEEKNNKQNEDAEISDEDEDEDDLKVDEAKVD 219

Query: 194 ----LVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NP 253
               +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+  +     +P
Sbjct: 220 ESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDP 279

Query: 254 PPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK 259
            P   PN        Q R+SG                            +QAE L  NYK
Sbjct: 280 LPDADPNEKFYVGDNQNRVSGQALDFKQLNVHAWEAFDKGQDIHLQAAPSQAELLYKNYK 339

[Close]
BLAST of Sed0018413 vs. ExPASy Swiss-Prot
Match: A2YQU8 (Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27673 PE=3 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 6.3e-31
Identity = 124/407 (30.47%), Postives = 164/407 (40.29%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNW----------------------- 73
           INP+IP Y++S PWYL+A           SLKHQRNW                       
Sbjct: 40  INPHIPQYMSSAPWYLNADKP--------SLKHQRNWKSDPNYTKSWYDRGAKLFQANKY 99

Query: 74  --------------KKALASTP------------------------YDAKRDRWSGYDSE 133
                         KK+    P                        YD KRDRW+GYD  
Sbjct: 100 RKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVESFELDYDGKRDRWNGYDPS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL------ 193
            Y   V++ YEAR+EAR  +LK+Q L+                  + E+D  K+      
Sbjct: 160 TYT-RVIADYEAREEARKKYLKEQQLKKLEEKDGEEGDENVASEEEDEEDGLKIDEAKVD 219

Query: 194 ----LVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NP 253
               +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+  +     +P
Sbjct: 220 ESAQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDP 279

Query: 254 PPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK 259
            P   PN        Q R+SG                            +QAE L  ++K
Sbjct: 280 LPDADPNDKFYVGDNQNRLSGQALEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFKSFK 339

[Close]
BLAST of Sed0018413 vs. ExPASy Swiss-Prot
Match: Q6ZK48 (Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0127700 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.3e-31
Identity = 124/407 (30.47%), Postives = 164/407 (40.29%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNW----------------------- 73
           INP+IP Y++S PWYL+A           SLKHQRNW                       
Sbjct: 40  INPHIPQYMSSAPWYLNADKP--------SLKHQRNWKSDPNYTKSWYDRGAKLFQANKY 99

Query: 74  --------------KKALASTP------------------------YDAKRDRWSGYDSE 133
                         KK+    P                        YD KRDRW+GYD  
Sbjct: 100 RKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVESFELDYDGKRDRWNGYDPS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL------ 193
            Y   V++ YEAR+EAR  +LK+Q L+                  + E+D  K+      
Sbjct: 160 TYT-RVIADYEAREEARKKYLKEQQLKKLEEKDGEEGDENVASEEEDEEDGLKIDEAKVD 219

Query: 194 ----LVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NP 253
               +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+  +     +P
Sbjct: 220 ESAQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDP 279

Query: 254 PPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK 259
            P   PN        Q R+SG                            +QAE L  ++K
Sbjct: 280 LPDADPNDKFYVGDNQNRLSGQALEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFKSFK 339

[Close]
BLAST of Sed0018413 vs. ExPASy Swiss-Prot
Match: O23174 (Pre-mRNA-splicing factor SLU7-B OS=Arabidopsis thaliana OX=3702 GN=At4g37120 PE=2 SV=3)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30
Identity = 121/410 (29.51%), Postives = 163/410 (39.76%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++  PWYL        K    SLKHQ+NWK                      
Sbjct: 40  INPHIPEYMSKAPWYL--------KSEQPSLKHQKNWKIEPEPKKIWYDRGKKIYQAEQY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          KA    P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACINCGAMTHSSKACMDRPRKIGAKYTNMNIAADEKIESFELDYDGKRDRWNGYDTS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------D 193
            Y   VV RY+A++EAR  +LK+Q L+  + +                           D
Sbjct: 160 TYR-HVVDRYDAKEEARKKYLKEQQLKKLEEKNNNENGDDATSDGEEDLDDLRVDEAKVD 219

Query: 194 DFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPP 253
           + + +  A  +    TT   +T +    R R+DT  YLLNL ++ SA+Y+    S+   P
Sbjct: 220 ESRQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAHYDPKTRSMREDP 279

Query: 254 PPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK 262
            P         L + Q R SG                            +QAE L  N+K
Sbjct: 280 LPDADPNEKFYLGDNQYRNSGQALEFKQINIHSCEAFDKGHDMHMQAAPSQAELLYKNFK 339

[Close]
BLAST of Sed0018413 vs. ExPASy Swiss-Prot
Match: Q9SHY8 (Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana OX=3702 GN=At1g65660 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 120/407 (29.48%), Postives = 162/407 (39.80%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+++          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNSEKP--------SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          KA    P                        YD KRDRW+GYD  
Sbjct: 100 RKGACQNCGAMTHTAKACMDRPRKIGAKYTNMNIAPDEKIESFELDYDGKRDRWNGYDPS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQ--------------SRDHEKDDFKLLVG----- 193
            Y   V+  YEA+++AR  +LK+Q L+              + D E+D+  L V      
Sbjct: 160 TYH-RVIDLYEAKEDARKKYLKEQQLKKLEEKNNNEKGDDANSDGEEDEDDLRVDEAKVD 219

Query: 194 -------ATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPP 253
                  A  +    TT   +T +    R R+DT  YLLNL ++ SA+Y+    S+   P
Sbjct: 220 ESRQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAHYDPKTRSMREDP 279

Query: 254 PPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK 259
            P         L + Q R SG                            +QAE L  +++
Sbjct: 280 LPDADPNDKFYLGDNQYRNSGQALEFKQLNIHSWEAFDKGQDMHMQAAPSQAELLYKSFQ 339

[Close]
BLAST of Sed0018413 vs. ExPASy Swiss-Prot
Match: Q4WWR2 (Pre-mRNA-splicing factor slu7 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=slu7 PE=3 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 5.0e-12
Identity = 79/279 (28.32%), Postives = 110/279 (39.43%), Query Frame = 0 

Query: 59  YDAKRDRWSGYDSENYACDVVSRYEARDEARSNFL--KQQNLQSRDHEKDDFKLLVG--- 118
           +DAKRDRW+GYD   Y   V+  YE  ++ + N     Q   +  D E DD +  +    
Sbjct: 114 WDAKRDRWNGYDPSEYR-QVIEEYEELEKLKRNTKPGAQDGKKIMDGELDDEEAAIEEAR 173

Query: 119 -ATTQTSTLTTATATTSSRARKDTPTYLLNLTNLKSAYYN---------SISNPPPPPLP 178
            A         +TAT + R R+DT  YLLNL +L SA Y+            +     L 
Sbjct: 174 YAEESDMGRQQSTATRNLRIREDTAKYLLNL-DLDSAKYDPKTRRMVDMGAQDDQAAALV 233

Query: 179 NTQKRISGPQTQAEF-------------------LNMNYKISKDMLKSQAKSTTDA---- 238
             +  +      AEF                   L  N   S ++L+ + ++ T+A    
Sbjct: 234 AEENFVRASGDAAEFERAQRYAWESQERGDKKIHLQAN-PTSGEILRKKEQAETEAKRQA 293

Query: 239 --------------------AEDMVV--------------------VPKSKFEEDVFVYN 260
                                E MV+                      KSK+ EDV V N
Sbjct: 294 QRKALLEKYGGEEYLKPTPLRETMVIENERFVEYDESGAIKGAPKNAVKSKYPEDVLVNN 353

[Close]
BLAST of Sed0018413 vs. ExPASy TrEMBL
Match: A0A2P5VZT4 (Pre-mRNA-splicing factor SLU7 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36398 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.2e-34
Identity = 127/384 (33.07%), Postives = 166/384 (43.23%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K+    P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACENCGAMTHDAKSCMERPRKKGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDAS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQ---NLQSRDHEKDDFKLLVGATTQTSTLTTATATTS 193
            YA  V+ RYEARDEAR  +LK+Q    L+ ++ + D+ K +  A  +    TT   +T 
Sbjct: 160 TYA-RVIERYEARDEARRKYLKEQQLKKLEEKNTKVDESKQMDFAKVEKRVRTTGGGSTG 219

Query: 194 S----RARKDTPTYLLNLTNLKSAYYNSIS-----NPPPPPLPN-------TQKRISG-- 253
           +    R R+DT  YLLNL ++ SAYY+  +     +P P   PN        Q R+SG  
Sbjct: 220 TVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDPLPDADPNEKFYEGDNQYRMSGQA 279

Query: 254 ------------------------PQTQAEFLNMNYKISKDMLKSQAKST------TDAA 259
                                     +QAE L  NYK+ K+ LKS+ K T        A 
Sbjct: 280 LEFKQLNIHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSKTKDTIMEKYGNAAT 339

[Close]
BLAST of Sed0018413 vs. ExPASy TrEMBL
Match: A0A6J1IHR4 (Pre-mRNA-splicing factor SLU7 OS=Cucurbita maxima OX=3661 GN=LOC111473171 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.1e-33
Identity = 130/407 (31.94%), Postives = 167/407 (41.03%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIHQADKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K+    P                        YD KRDRW+GYD  
Sbjct: 100 RKGACENCGALTHDAKSCMERPRKIGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDPA 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQ----------------SRDHEKDDFKL------ 193
            YA  V+ RYEARDEAR NFLK+Q L+                  D ++DD K+      
Sbjct: 160 TYA-RVIERYEARDEARRNFLKEQQLKKLEEKNNKQNEDAEISDEDEDEDDLKVDEAKVD 219

Query: 194 ----LVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NP 253
               +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+  +     +P
Sbjct: 220 ESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDP 279

Query: 254 PPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK 259
            P   PN        Q R+SG                            +QAE L  NYK
Sbjct: 280 LPDADPNEKFYVGDNQNRVSGQALDFKQLNVHAWEAFDKGQDIHLQAAPSQAELLYKNYK 339

[Close]
BLAST of Sed0018413 vs. ExPASy TrEMBL
Match: A0A6J0JHS2 (Pre-mRNA-splicing factor SLU7 OS=Raphanus sativus OX=3726 GN=LOC108806716 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.1e-33
Identity = 127/408 (31.13%), Postives = 169/408 (41.42%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A        PV+SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNA------DKPVKSLKHQRKWKVDPNYTKSWYDRGAKTFKADKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K     P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACENCGAMTHKTKLCTERPRKMGAKWTNKNIAPDEKIETFDLDYDGKRDRWNGYDTA 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK------------------------DDF 193
            Y+ +V+ RYEARDEAR NFLK+Q L+  D ++                        D+ 
Sbjct: 160 KYS-EVIKRYEARDEARRNFLKEQQLKKLDKKRDNKIDEEECSDEEEEALKHDEAKADES 219

Query: 194 KLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYN-SISNPPPPPLP 253
           K +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+    +    PLP
Sbjct: 220 KQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDPLP 279

Query: 254 NT-----------QKRISG---------------------------PQTQAEFLNMNYKI 260
           NT           Q R+SG                             +QAE L   YK 
Sbjct: 280 NTDPNEKFYAGDNQYRMSGEALEFKKLNIHALQLSEKGQEEVNMQAAPSQAELLFKKYKD 339

[Close]
BLAST of Sed0018413 vs. ExPASy TrEMBL
Match: A0A6J1AVA1 (Pre-mRNA-splicing factor SLU7 OS=Herrania umbratica OX=108875 GN=LOC110421167 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32
Identity = 132/407 (32.43%), Postives = 166/407 (40.79%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIFQADKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          KA    P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACENCGAMTHNLKACMERPRKKGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDAS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQS--------------RDHEKDDFKLLVG----- 193
            YA  V+ RYEARDEAR  +LK+Q L+                D E DD  L V      
Sbjct: 160 TYA-RVIERYEARDEARRKYLKEQQLKKLEEKNSKTNGEEEVSDEEDDDDALKVDEAKVD 219

Query: 194 -------ATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NP 253
                  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+  +     +P
Sbjct: 220 ESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDP 279

Query: 254 PPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK 259
            P   PN        Q R+SG                            +QAE L  NYK
Sbjct: 280 LPDADPNEKFYGGDNQYRMSGQALEFKQLNIHSWEAFDKGQDIHMQAAPSQAELLFRNYK 339

[Close]
BLAST of Sed0018413 vs. ExPASy TrEMBL
Match: A0A5E4EJY9 (Pre-mRNA-splicing factor SLU7 OS=Prunus dulcis OX=3755 GN=ALMOND_2B031412 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-32
Identity = 128/408 (31.37%), Postives = 168/408 (41.18%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+A+          SLKHQR WK                      
Sbjct: 47  INPHIPQYMSSAPWYLNAERP--------SLKHQRKWKSDPNYTKSWYDRGAKIYHPDKY 106

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          K+    P                        YD KRDRW+G+D+ 
Sbjct: 107 RKGACENCGAMTHSAKSCMERPRKKGAKWTNFHIAPDEKIEMFELDYDGKRDRWNGFDAA 166

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------D 193
            YAC V+ RYEARDEAR  +LK+Q L+  + +                           D
Sbjct: 167 TYAC-VIERYEARDEARRKYLKEQQLKKLEEKNNKQNGEGEVSDDDEDNDALKVDEAKVD 226

Query: 194 DFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYNSIS-----NP 253
           + K +  A  +    TT   +T +    R R+DT  YLLNL ++ SAYY+  +     +P
Sbjct: 227 ESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAYYDPKTRSMREDP 286

Query: 254 PPPPLPN-------TQKRISG--------------------------PQTQAEFLNMNYK 260
            P   PN        Q R+SG                            +QAE L  N+K
Sbjct: 287 LPDADPNEKFYGGDNQYRVSGQALEFKKLNIHAWEAFEKGQDIHMQAAPSQAELLYKNFK 346

[Close]
BLAST of Sed0018413 vs. TAIR 10
Match: AT4G37120.1 (Pre-mRNA splicing Prp18-interacting factor )

HSP 1 Score: 134.8 bits (338), Expect = 9.9e-32
Identity = 121/410 (29.51%), Postives = 163/410 (39.76%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++  PWYL        K    SLKHQ+NWK                      
Sbjct: 40  INPHIPEYMSKAPWYL--------KSEQPSLKHQKNWKIEPEPKKIWYDRGKKIYQAEQY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          KA    P                        YD KRDRW+GYD+ 
Sbjct: 100 RKGACINCGAMTHSSKACMDRPRKIGAKYTNMNIAADEKIESFELDYDGKRDRWNGYDTS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK--------------------------D 193
            Y   VV RY+A++EAR  +LK+Q L+  + +                           D
Sbjct: 160 TYR-HVVDRYDAKEEARKKYLKEQQLKKLEEKNNNENGDDATSDGEEDLDDLRVDEAKVD 219

Query: 194 DFKLLVGATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPP 253
           + + +  A  +    TT   +T +    R R+DT  YLLNL ++ SA+Y+    S+   P
Sbjct: 220 ESRQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAHYDPKTRSMREDP 279

Query: 254 PPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK 262
            P         L + Q R SG                            +QAE L  N+K
Sbjct: 280 LPDADPNEKFYLGDNQYRNSGQALEFKQINIHSCEAFDKGHDMHMQAAPSQAELLYKNFK 339

[Close]
BLAST of Sed0018413 vs. TAIR 10
Match: AT1G65660.1 (Pre-mRNA splicing Prp18-interacting factor )

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 120/407 (29.48%), Postives = 162/407 (39.80%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWK---------------------- 73
           INP+IP Y++S PWYL+++          SLKHQR WK                      
Sbjct: 40  INPHIPQYMSSAPWYLNSEKP--------SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKY 99

Query: 74  ---------------KALASTP------------------------YDAKRDRWSGYDSE 133
                          KA    P                        YD KRDRW+GYD  
Sbjct: 100 RKGACQNCGAMTHTAKACMDRPRKIGAKYTNMNIAPDEKIESFELDYDGKRDRWNGYDPS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQ--------------SRDHEKDDFKLLVG----- 193
            Y   V+  YEA+++AR  +LK+Q L+              + D E+D+  L V      
Sbjct: 160 TYH-RVIDLYEAKEDARKKYLKEQQLKKLEEKNNNEKGDDANSDGEEDEDDLRVDEAKVD 219

Query: 194 -------ATTQTSTLTTATATTSS----RARKDTPTYLLNLTNLKSAYYN----SISNPP 253
                  A  +    TT   +T +    R R+DT  YLLNL ++ SA+Y+    S+   P
Sbjct: 220 ESRQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNL-DVNSAHYDPKTRSMREDP 279

Query: 254 PPP--------LPNTQKRISG--------------------------PQTQAEFLNMNYK 259
            P         L + Q R SG                            +QAE L  +++
Sbjct: 280 LPDADPNDKFYLGDNQYRNSGQALEFKQLNIHSWEAFDKGQDMHMQAAPSQAELLYKSFQ 339

[Close]
BLAST of Sed0018413 vs. TAIR 10
Match: AT3G45950.1 (Pre-mRNA splicing Prp18-interacting factor )

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 63/234 (26.92%), Postives = 84/234 (35.90%), Query Frame = 0 

Query: 14  INPNIPSYITSTPWYLHAKGSVTTKGPVRSLKHQRNWKKALAST---------------- 73
           IN +IP Y+T  P Y         K    SLKHQ+NWK    ST                
Sbjct: 40  INLHIPKYLTIPPLY--------AKSEKPSLKHQKNWKTKPVSTTSYYDRGAKTYQAEKY 99

Query: 74  ---------------------------------------------PYDAKRDRWSGYDSE 133
                                                         YD KRDRW+GYD  
Sbjct: 100 RKGACQNCGAMTHDVKTCMERPRKVGAKYTDKNIAPDEKIESLEFDYDGKRDRWNGYDPS 159

Query: 134 NYACDVVSRYEARDEARSNFLKQQNLQSRDHEK-----------DDFKLLVGATTQTSTL 166
           +Y C V  R+EA++ AR  +L +Q L ++  EK           D+ K+        + +
Sbjct: 160 SY-CHVRDRHEAKENAREKYLNEQQLIAKLEEKNIDGEEEDLRVDEAKIDESMQVDFAKV 219

The following BLAST results are available for this feature:
BLAST of Sed0018413 vs. NCBI nr
Match NameE-valueIdentityDescription
PPD79477.15.8e-3433.33hypothetical protein GOBAR_DD23591 [Gossypium barbadense][more]
PPR84315.11.7e-3333.07hypothetical protein GOBAR_AA36398 [Gossypium barbadense][more]
XP_020411368.18.4e-3332.22pre-mRNA-splicing factor SLU7 isoform X4 [Prunus persica][more]
XP_018434399.11.9e-3231.13PREDICTED: pre-mRNA-splicing factor SLU7-like isoform X1 [Raphanus sativus] >XP_... [more]
XP_022974492.11.9e-3231.94pre-mRNA-splicing factor SLU7 isoform X1 [Cucurbita maxima] >XP_022974493.1 pre-... [more]
BLAST of Sed0018413 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A2YQU86.3e-3130.47Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_2767... [more]
Q6ZK486.3e-3130.47Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0... [more]
O231741.4e-3029.51Pre-mRNA-splicing factor SLU7-B OS=Arabidopsis thaliana OX=3702 GN=At4g37120 PE=... [more]
Q9SHY81.9e-2729.48Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana OX=3702 GN=At1g65660 PE=... [more]
Q4WWR25.0e-1228.32Pre-mRNA-splicing factor slu7 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af... [more]
BLAST of Sed0018413 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5VZT48.2e-3433.07Pre-mRNA-splicing factor SLU7 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA36398 P... [more]
A0A6J1IHR49.1e-3331.94Pre-mRNA-splicing factor SLU7 OS=Cucurbita maxima OX=3661 GN=LOC111473171 PE=3 S... [more]
A0A6J0JHS29.1e-3331.13Pre-mRNA-splicing factor SLU7 OS=Raphanus sativus OX=3726 GN=LOC108806716 PE=3 S... [more]
A0A6J1AVA12.0e-3232.43Pre-mRNA-splicing factor SLU7 OS=Herrania umbratica OX=108875 GN=LOC110421167 PE... [more]
A0A5E4EJY92.0e-3231.37Pre-mRNA-splicing factor SLU7 OS=Prunus dulcis OX=3755 GN=ALMOND_2B031412 PE=3 S... [more]
BLAST of Sed0018413 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37120.19.9e-3229.51Pre-mRNA splicing Prp18-interacting factor [more]
AT1G65660.11.3e-2829.48Pre-mRNA splicing Prp18-interacting factor [more]
AT3G45950.13.2e-0626.92Pre-mRNA splicing Prp18-interacting factor [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021715Pre-mRNA-splicing factor SLU7 domainPFAMPF11708Slu7coord: 59..153
e-value: 8.8E-11
score: 42.1
NoneNo IPR availablePANTHERPTHR12942:SF2PRE-MRNA-SPLICING FACTOR SLU7coord: 203..255
NoneNo IPR availablePANTHERPTHR12942:SF2PRE-MRNA-SPLICING FACTOR SLU7coord: 58..153
coord: 11..53
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 203..255
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 11..53
coord: 58..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018413.1Sed0018413.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
molecular_function GO:0030628 pre-mRNA 3'-splice site binding
molecular_function GO:0000386 second spliceosomal transesterification activity