Sed0018400 (gene) Chayote v1

Overview
NameSed0018400
Typegene
OrganismSechium edule (Chayote v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM17-2-like
LocationLG08: 6523199 .. 6524247 (+)
RNA-Seq ExpressionSed0018400
SyntenySed0018400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGAACAAACTCCGCTTCATTAACCAAAAGCGAAATAAAAACCTATTTCAAAGGTTTCAGCCGACTTTTTCTTCTCTTCAAAGCCTAAGTAAGGATCAAACCCTCCTCCGATCAAGCCTTCATGGGAACGCCGGAAACTTCTCGGGAGCCATGTCCAGATCGGATCCTCGACGACATCGGCGGCGCCTTCGGCATGGGCGCCGTCGGCGGCTCCGGCTTCCACTTTCTCAAAGGCCTTTACAGTTCTCCTAAAGGCACCCGCCTCCTCGGCGGCACTCAAGCCGTCCGCATGAACGCGCCTCGCATCGGCGGCAGCTTTGCCGTTTGGGGCGGCCTGTTCTCCACCTTCGATTGCTCCCTGGTTTACCTCCGCCAGAAGGAAGATCCATGGAACTCGATCCTCGCCGGCGCCGCTACTGGCGGATTCCTCCAGATGCGTCAGGGACTCGGCGCCTCGGCCCGATCCGCTGCGTTCGGCGGTGTTCTGTTGGCTCTGATCGAAGGCGCCGGGATCATGCTCAACAAGGTGCTTAGTCAACCGCAGAACGCTCCAATTATGATCGACGACGCCGGTGCTATGAGCGGCATTCCCGGTTACCCTATGGATCAGGTTCCGGCGAGCCCCGAATCTTCAGGTTCGGGATCGTGGCTCGGAGGGTGGTTCGGTGGCGGCCAGAAAAAGGATTCACAGGCAAGCCGTGGAGACAGCGAAACCAAGATTTTGGAGAGCTTTGATGCACCGCCGGTCCCTAATTATGAGTTCAAGTAAATATTCTTTTTTCTGAGAATTGATTTATTAGGGAGAGTTAATTATAATTGGAATTTTGAATCTATGCTGACTTGAAATTGAAATTGAATTTGCAATTGCAATATCAAAGTTTTATTTCTTTGCTTTCTGGTTTTTGTTCTGAAATAGTGATCTACTGATCTGTAATAATAACATTGTAGAACAATATTCTTATCTATTTGAATATCATTTACCATTGAAGCTAGGTGAAGGATTGTTTTGAGCTAGATTAAAATTGCATTTTGTTTGTGTTGTTTCGGC

mRNA sequence

CCCGAACAAACTCCGCTTCATTAACCAAAAGCGAAATAAAAACCTATTTCAAAGGTTTCAGCCGACTTTTTCTTCTCTTCAAAGCCTAAGTAAGGATCAAACCCTCCTCCGATCAAGCCTTCATGGGAACGCCGGAAACTTCTCGGGAGCCATGTCCAGATCGGATCCTCGACGACATCGGCGGCGCCTTCGGCATGGGCGCCGTCGGCGGCTCCGGCTTCCACTTTCTCAAAGGCCTTTACAGTTCTCCTAAAGGCACCCGCCTCCTCGGCGGCACTCAAGCCGTCCGCATGAACGCGCCTCGCATCGGCGGCAGCTTTGCCGTTTGGGGCGGCCTGTTCTCCACCTTCGATTGCTCCCTGGTTTACCTCCGCCAGAAGGAAGATCCATGGAACTCGATCCTCGCCGGCGCCGCTACTGGCGGATTCCTCCAGATGCGTCAGGGACTCGGCGCCTCGGCCCGATCCGCTGCGTTCGGCGGTGTTCTGTTGGCTCTGATCGAAGGCGCCGGGATCATGCTCAACAAGGTGCTTAGTCAACCGCAGAACGCTCCAATTATGATCGACGACGCCGGTGCTATGAGCGGCATTCCCGGTTACCCTATGGATCAGGTTCCGGCGAGCCCCGAATCTTCAGGTTCGGGATCGTGGCTCGGAGGGTGGTTCGGTGGCGGCCAGAAAAAGGATTCACAGGCAAGCCGTGGAGACAGCGAAACCAAGATTTTGGAGAGCTTTGATGCACCGCCGGTCCCTAATTATGAGTTCAAGTAAATATTCTTTTTTCTGAGAATTGATTTATTAGGGAGAGTTAATTATAATTGGAATTTTGAATCTATGCTGACTTGAAATTGAAATTGAATTTGCAATTGCAATATCAAAGTTTTATTTCTTTGCTTTCTGGTTTTTGTTCTGAAATAGTGATCTACTGATCTGTAATAATAACATTGTAGAACAATATTCTTATCTATTTGAATATCATTTACCATTGAAGCTAGGTGAAGGATTGTTTTGAGCTAGATTAAAATTGCATTTTGTTTGTGTTGTTTCGGC

Coding sequence (CDS)

ATGGGAACGCCGGAAACTTCTCGGGAGCCATGTCCAGATCGGATCCTCGACGACATCGGCGGCGCCTTCGGCATGGGCGCCGTCGGCGGCTCCGGCTTCCACTTTCTCAAAGGCCTTTACAGTTCTCCTAAAGGCACCCGCCTCCTCGGCGGCACTCAAGCCGTCCGCATGAACGCGCCTCGCATCGGCGGCAGCTTTGCCGTTTGGGGCGGCCTGTTCTCCACCTTCGATTGCTCCCTGGTTTACCTCCGCCAGAAGGAAGATCCATGGAACTCGATCCTCGCCGGCGCCGCTACTGGCGGATTCCTCCAGATGCGTCAGGGACTCGGCGCCTCGGCCCGATCCGCTGCGTTCGGCGGTGTTCTGTTGGCTCTGATCGAAGGCGCCGGGATCATGCTCAACAAGGTGCTTAGTCAACCGCAGAACGCTCCAATTATGATCGACGACGCCGGTGCTATGAGCGGCATTCCCGGTTACCCTATGGATCAGGTTCCGGCGAGCCCCGAATCTTCAGGTTCGGGATCGTGGCTCGGAGGGTGGTTCGGTGGCGGCCAGAAAAAGGATTCACAGGCAAGCCGTGGAGACAGCGAAACCAAGATTTTGGAGAGCTTTGATGCACCGCCGGTCCCTAATTATGAGTTCAAGTAA

Protein sequence

MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAPRIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGGVLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVPASPESSGSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK
Homology
BLAST of Sed0018400 vs. NCBI nr
Match: XP_038878607.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa hispida])

HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107
Identity = 196/226 (86.73%), Postives = 208/226 (92.04%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM+G+PGYP+DQ+P         ASP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPVDQIPGLTPPETSSASPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
             GSGSW GGWFGGGQKKDS+A+RGD ETKILESFD+PPVPN+EFK
Sbjct: 181 GAGSGSWFGGWFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

BLAST of Sed0018400 vs. NCBI nr
Match: KAG7023615.1 (Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106
Identity = 195/226 (86.28%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYPMDQ+P         ASP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 GSG--SWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
            SG  SW GGWFGGGQKKDS+ASRG+S+TKILESFD+PPVPN+E+K
Sbjct: 181 NSGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

BLAST of Sed0018400 vs. NCBI nr
Match: XP_022144978.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Momordica charantia])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 191/227 (84.14%), Postives = 206/227 (90.75%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QA+RMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VY+RQKEDPWNSI+AGAATGGFLQMRQG  ASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP------------ASP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAM G+PGYPMDQ+P            +SP
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 ESSGSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
            SSGSGSW GGWFGGGQKKDS+A+RGD ETKILESFD+PPVPN+E+K
Sbjct: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

BLAST of Sed0018400 vs. NCBI nr
Match: XP_023516392.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 194/226 (85.84%), Postives = 208/226 (92.04%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP--ASPESS------- 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYPMDQ+P  A+P+SS       
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQSSGASPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
             GS SW GGWFGGGQKKDS+ASRG+S+TKILESFD+PPVPN+E+K
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

BLAST of Sed0018400 vs. NCBI nr
Match: XP_022961015.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita moschata])

HSP 1 Score: 394.8 bits (1013), Expect = 4.7e-106
Identity = 195/226 (86.28%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYPMDQ+P         ASP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
             GS SW GGWFGGGQKKDS+ASRG+S+TKILESFD+PPVPN+E+K
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

BLAST of Sed0018400 vs. ExPASy Swiss-Prot
Match: Q9SP35 (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80
Identity = 158/247 (63.97%), Postives = 183/247 (74.09%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHF+KG Y+SPKG+R +GGTQ+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           R GGSFAVWGGLFSTFDC++VYLRQKEDPWNSI+AGAATGGFL MRQG GA++RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAG--------AMSGIPGYP-MDQVPA----- 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G         M G+PG P M  +P      
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 ------------------SPESSGSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPP 216
                             +  SS S SW GG F   +KK+      +S+T++LESFDAPP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

BLAST of Sed0018400 vs. ExPASy Swiss-Prot
Match: Q9LN27 (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana OX=3702 GN=TIM17-1 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.2e-74
Identity = 143/220 (65.00%), Postives = 164/220 (74.55%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGS +H ++G+Y+SP G RL GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           R GGSF+VWGGL+STFDC+LVY RQKEDPWNSIL+GAATGGFL +RQGLGASARSA  GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAG-----AMSGIPGYPMDQVPASPESSGSGS 180
           VLLA+IEG GIMLNKV S   N   M D A       M  I G  +     S  SSGS S
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAATSLPYGMGQISGQSVPVPETSSSSSGSVS 180

Query: 181 WLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
           W G  F   +KK+++    +S T ILESFDAPPVP YEFK
Sbjct: 181 WFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

BLAST of Sed0018400 vs. ExPASy Swiss-Prot
Match: O60830 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens OX=9606 GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40
Identity = 91/167 (54.49%), Postives = 109/167 (65.27%), Query Frame = 0

Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGT--RLLGGTQAVRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   RL G   AVR+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGGVL 124
           GGSFAVWGGLFST DC LV LR KEDPWNSI +GA TG  L  R G  A   SA  GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAM-----SGIPGYPMDQ 164
           LALIEG GI+L +  +Q  +NAP  ++D   +     +  PGYP  Q
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLPPKDGTPAPGYPSYQ 169

BLAST of Sed0018400 vs. ExPASy Swiss-Prot
Match: Q9Z0V8 (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Mus musculus OX=10090 GN=Timm17a PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.7e-40
Identity = 90/167 (53.89%), Postives = 108/167 (64.67%), Query Frame = 0

Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGT--RLLGGTQAVRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F   KG  +SP G   RL G   A++  AP++
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQL 62

Query: 65  GGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGGVL 124
           GGSFAVWGGLFST DCS+V +R KEDPWNSI +GA TG  L  R G  A   SAA GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122

Query: 125 LALIEGAGIMLNKVLS-QPQNAPIMIDDAGAMSGIPGYPMDQVPASP 169
           LALIEGAGI+L +  S Q  N P   +D   +      P  Q+P+SP
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQFTEDHSQL------PSSQLPSSP 163

BLAST of Sed0018400 vs. ExPASy Swiss-Prot
Match: Q9Z0V7 (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.1e-40
Identity = 90/164 (54.88%), Postives = 107/164 (65.24%), Query Frame = 0

Query: 5   ETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGT--RLLGGTQAVRMNAPRI 64
           E +REPCP RI+DD GGAF MG +GG  F  +KG  ++P G   R  G   AVR+ AP+I
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62

Query: 65  GGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGGVL 124
           GGSFAVWGGLFST DC LV LR KEDPWNSI +GA TG  L  R G  A   SA  GG+L
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNKVLSQP-QNAPIMIDDAGAM-----SGIPGYP 161
           LALIEG GI+L +  +Q  +NAP  ++D   +     S  PGYP
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPSQLTPKEGSPAPGYP 166

BLAST of Sed0018400 vs. ExPASy TrEMBL
Match: A0A6J1CUQ0 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordica charantia OX=3673 GN=LOC111014515 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 191/227 (84.14%), Postives = 206/227 (90.75%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QA+RMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAIRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VY+RQKEDPWNSI+AGAATGGFLQMRQG  ASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYVRQKEDPWNSIIAGAATGGFLQMRQGFRASARSAVFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP------------ASP 180
           VLLALIEGAGIMLNK+LSQPQNAPIMIDDAGAM G+PGYPMDQ+P            +SP
Sbjct: 121 VLLALIEGAGIMLNKLLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLTPPQTLPHAASSP 180

Query: 181 ESSGSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
            SSGSGSW GGWFGGGQKKDS+A+RGD ETKILESFD+PPVPN+E+K
Sbjct: 181 GSSGSGSWFGGWFGGGQKKDSEAARGDGETKILESFDSPPVPNFEYK 227

BLAST of Sed0018400 vs. ExPASy TrEMBL
Match: A0A6J1HAR7 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111461647 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106
Identity = 195/226 (86.28%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGFGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM G+PGYPMDQ+P         ASP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMGGVPGYPMDQIPGLATPQTSGASPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
             GS SW GGWFGGGQKKDS+ASRG+S+TKILESFD+PPVPN+E+K
Sbjct: 181 NAGSESWFGGWFGGGQKKDSEASRGESDTKILESFDSPPVPNFEYK 226

BLAST of Sed0018400 vs. ExPASy TrEMBL
Match: A0A0A0LWN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574940 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.9e-106
Identity = 195/226 (86.28%), Postives = 208/226 (92.04%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG+RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGSRLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG+GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM+G+PGYPMDQ+P          SP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSSGSPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
             GSGSW GG FGGGQKKDS+A+RGD ETKILESFD+PPVPN+EFK
Sbjct: 181 DAGSGSWFGGLFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

BLAST of Sed0018400 vs. ExPASy TrEMBL
Match: A0A5D3CFZ3 (Mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002920 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.7e-106
Identity = 195/226 (86.28%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG+GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM+G+PGYPMDQ+P         ASP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSSASPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
              SGSW GG FGGGQKKDS+A+RGD ETKILESFD+PPVPN+EFK
Sbjct: 181 DASSGSWFGGLFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

BLAST of Sed0018400 vs. ExPASy TrEMBL
Match: A0A1S3BPZ0 (mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis melo OX=3656 GN=LOC103492263 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.7e-106
Identity = 195/226 (86.28%), Postives = 207/226 (91.59%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHFLKG+YSSPKG RLLGG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYSSPKGARLLGGSQAVRMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           RIGGSFAVWGGLFSTFDCS+VYLRQKEDPWNSI+AGAATGGFLQMRQG+GASARSA FGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIIAGAATGGFLQMRQGVGASARSALFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMSGIPGYPMDQVP---------ASPESS 180
           VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAM+G+PGYPMDQ+P         ASP SS
Sbjct: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAGAMAGVPGYPMDQIPGLTPPGTSSASPGSS 180

Query: 181 --GSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
              SGSW GG FGGGQKKDS+A+RGD ETKILESFD+PPVPN+EFK
Sbjct: 181 DASSGSWFGGLFGGGQKKDSEANRGDGETKILESFDSPPVPNFEFK 226

BLAST of Sed0018400 vs. TAIR 10
Match: AT2G37410.1 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 300.8 bits (769), Expect = 8.6e-82
Identity = 158/247 (63.97%), Postives = 183/247 (74.09%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHF+KG Y+SPKG+R +GGTQ+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           R GGSFAVWGGLFSTFDC++VYLRQKEDPWNSI+AGAATGGFL MRQG GA++RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAG--------AMSGIPGYP-MDQVPA----- 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G         M G+PG P M  +P      
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 ------------------SPESSGSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPP 216
                             +  SS S SW GG F   +KK+      +S+T++LESFDAPP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

BLAST of Sed0018400 vs. TAIR 10
Match: AT2G37410.2 (translocase inner membrane subunit 17-2 )

HSP 1 Score: 300.8 bits (769), Expect = 8.6e-82
Identity = 158/247 (63.97%), Postives = 183/247 (74.09%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPETSREPCPDRILDDIGGAFGMGAVGGS FHF+KG Y+SPKG+R +GGTQ+V MNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           R GGSFAVWGGLFSTFDC++VYLRQKEDPWNSI+AGAATGGFL MRQG GA++RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAG--------AMSGIPGYP-MDQVPA----- 180
           VLLALIEGAGIMLNKVL+QPQN  +M++D G         M G+PG P M  +P      
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQN--MMMEDPGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 180

Query: 181 ------------------SPESSGSGSWLGGWFGGGQKKDSQASRGDSETKILESFDAPP 216
                             +  SS S SW GG F   +KK+      +S+T++LESFDAPP
Sbjct: 181 MGQMQSQAQIRSESQNQNTASSSSSSSWFGGLF--DKKKEEVQPGSESKTEVLESFDAPP 240

BLAST of Sed0018400 vs. TAIR 10
Match: AT1G20350.1 (translocase inner membrane subunit 17-1 )

HSP 1 Score: 280.0 bits (715), Expect = 1.6e-75
Identity = 143/220 (65.00%), Postives = 164/220 (74.55%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           MGTPE+SREPCPDRILDD+GGAF MGAVGGS +H ++G+Y+SP G RL GG QA+RM+ P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           R GGSF+VWGGL+STFDC+LVY RQKEDPWNSIL+GAATGGFL +RQGLGASARSA  GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 VLLALIEGAGIMLNKVLSQPQNAPIMIDDAG-----AMSGIPGYPMDQVPASPESSGSGS 180
           VLLA+IEG GIMLNKV S   N   M D A       M  I G  +     S  SSGS S
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAATSLPYGMGQISGQSVPVPETSSSSSGSVS 180

Query: 181 WLGGWFGGGQKKDSQASRGDSETKILESFDAPPVPNYEFK 216
           W G  F   +KK+++    +S T ILESFDAPPVP YEFK
Sbjct: 181 WFGSLF--KKKKETEDHHSESRTHILESFDAPPVPTYEFK 218

BLAST of Sed0018400 vs. TAIR 10
Match: AT5G11690.1 (translocase inner membrane subunit 17-3 )

HSP 1 Score: 148.3 bits (373), Expect = 7.1e-36
Identity = 74/126 (58.73%), Postives = 97/126 (76.98%), Query Frame = 0

Query: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSGFHFLKGLYSSPKGTRLLGGTQAVRMNAP 60
           M T + S+E    RI++ IG AFG GAVGGS +HF++G Y+SP G R +GGTQA  MNAP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGG 120
           R+GG+FAV+GGL STFD +LV +R+KEDPWNSI+AGAATGG L +R+G+ A++ SA   G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 VLLALI 127
             LA++
Sbjct: 121 FFLAVL 126

BLAST of Sed0018400 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0

Query: 20  GGAFGMGAVGGSGFHFLKGLYSSPKG-------TRLLGGT-QAVRMNAPRIGGSFAVWGG 79
           G  +  G+V G+      G+ S   G        R+L  + QA R    R+G    + G 
Sbjct: 64  GTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVG----IVGL 123

Query: 80  LFSTFDCSLVYLRQKEDPWNSILAGAATGGFLQMRQGLGASARSAAFGGV 122
           +++  +  +V +  K+D W S++AG  TG   +  +G+ ++A + AFGG+
Sbjct: 124 IYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGI 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878607.14.3e-10786.73mitochondrial import inner membrane translocase subunit TIM17-2-like [Benincasa ... [more]
KAG7023615.12.8e-10686.28Mitochondrial import inner membrane translocase subunit TIM17-2, partial [Cucurb... [more]
XP_022144978.13.6e-10684.14mitochondrial import inner membrane translocase subunit TIM17-2-like [Momordica ... [more]
XP_023516392.13.6e-10685.84mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ... [more]
XP_022961015.14.7e-10686.28mitochondrial import inner membrane translocase subunit TIM17-2-like [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9SP351.2e-8063.97Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis t... [more]
Q9LN272.2e-7465.00Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis t... [more]
O608302.1e-4054.49Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens ... [more]
Q9Z0V84.7e-4053.89Mitochondrial import inner membrane translocase subunit Tim17-A OS=Mus musculus ... [more]
Q9Z0V76.1e-4054.88Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus ... [more]
Match NameE-valueIdentityDescription
A0A6J1CUQ01.7e-10684.14mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Momordic... [more]
A0A6J1HAR72.3e-10686.28mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucurbit... [more]
A0A0A0LWN73.9e-10686.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574940 PE=4 SV=1[more]
A0A5D3CFZ38.7e-10686.28Mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis ... [more]
A0A1S3BPZ08.7e-10686.28mitochondrial import inner membrane translocase subunit TIM17-2-like OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT2G37410.18.6e-8263.97translocase inner membrane subunit 17-2 [more]
AT2G37410.28.6e-8263.97translocase inner membrane subunit 17-2 [more]
AT1G20350.11.6e-7565.00translocase inner membrane subunit 17-1 [more]
AT5G11690.17.1e-3658.73translocase inner membrane subunit 17-3 [more]
AT1G17530.11.5e-0427.27translocase of inner mitochondrial membrane 23 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 16..122
e-value: 7.6E-27
score: 93.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..215
NoneNo IPR availablePANTHERPTHR10485:SF23MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM17-2-LIKEcoord: 1..215
NoneNo IPR availablePANTHERPTHR10485MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17coord: 1..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018400.1Sed0018400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0031305 integral component of mitochondrial inner membrane
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex
molecular_function GO:0008320 protein transmembrane transporter activity