Sed0018381 (gene) Chayote v1

Overview
NameSed0018381
Typegene
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
LocationLG04: 35462365 .. 35466195 (-)
RNA-Seq ExpressionSed0018381
SyntenySed0018381
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGGAGACAGAAAGCGGCGGCGACGCTGCCGAATCTCATCGGAAGTTTGAAGAAAGATCGCCGGAGGGCCGGTCTACGCCCGCCTCTGCCGTCGTTGAGACGCGCATTTTCGCTTTATGATCAGATCAATCTCATCGACAATGTTCCCGAAGATCAGCTTCGCTTTCAAGGGTTTAACCCTAACTTCTCGTTTTTTTTTTGTTCTTTTTTGCATACATTTCTCTTTTTCTCGATTTGATATTGTTGTTTCTTTTTTAAGGTATACTGAAACGGGTTTTACTGTGAATCGAGTGGATTATGAGGGGAGCTTGCTATGTGTTGGGAATTTGTTGATGTCTTGGAGCCCTAAGAATTTTTTAGAGATTACGCCTGAGAGGTTTGCTTTGTATTTCCTCTTTATTAACTTGCAATGCTTTATTTACTTTCTTTTGGTGATTGGAATGTATATTTTGCAGCTTATCTATTTTCCAGATTCTGCGCCCGCGCCATATTCCAGGTAAAATATGGATAGTTGAAAAGGGATTGAAAATTATTGTACGTTGTTGACGTGAAGTAGTTTAAGGGGATGTTGGGGGCAAAGAGAATGAAAAGGATTATGGACGGGATGAGAATTAGGATGAGAATACGGGGCAGAATGATTTTTGGAGAAAATGATTATTTTTGTTTGGAGTATAGAGAATGGTTACAAGGGAACCGTTACTTGTGGTTGGAATTGGGGTGAAAAGAATAGTTATGGGGAGGATAAAATGGCGAGTATATGGAGAATGAAAAGTGGTTACAAGAGAGAATGAAAAGTGGTTATGTGGAGAATAGAAAGTGGTTATTGGGAGAACAAAAAGTGAATATGAGAAAATGCGATTATGGGGATAATGAATCTGGGTGTCTGAGACATGATTAAGATGATTATTCTCCTTATAACCATTCTCATTTCCCAATTACCCCTAAGTGTTTCTATGAAATGTTATCCCTTGACCTATTTTTCTGAGTTTTCATTTCTTGATTCTTTTTTTTTCTTGTATATGGACGAACAAGGTCCTTTATTCTACGCTCAGGTTGGCTCATCTGTTTCTTTGAAGTGGTTTTCTGTTAAAAGGATATGATTTTGGAGAATTTGAAGTATATACCAAGTTGAAAGTGTAGATGAACCTTCTTATCCAAAAAAAAGAAAGTGTAGATGAACCTTAAGTTCTTAAACTGGAAGATAAAGATTCCTTTTTCTTCTCTCTTTATCTATTTTTCCTTTCCATTTGGGAAACTGATAGGCATGTCTACCATTCATATATTTTAATTACGGTAGAAGAGGGCTGAGGATCCCTTGAGATAGCTGCATCGGCTAGCTAATGCAGTTAGCTCAACTCGATCAATCGGCCGATATTACTGTTATTCGAAAGAGTTAGCTGGCAGGGGCTTGTATTCTGTTGATAGGAGATGAGTGATTTAATCCAGAATTTGTACATTTGTTATAGAGAAAGGGAAGGAAGAAAATAACTTAATAACGGTGGGGGTGGTATCGGACTTCTCAAATATCTGAAAGATTTACATTTCTAAGCTATTGAATAAACAACCCAAGTCCTAAAGCTCTTTACTTCTTTATTCTCTCTGTGACATATCAAAATTTAATGCTAGCTATCTTGAGGATAGCACATGTGGTGGTCTTTTCTGTCCATACTGTTAATGTCTTCCTTTTGGCATTCTTTAATCTTTTCTAAAGTCTTACATAAGAGATTCATTCACTTTGAGGTTGTGTGCATTAGCTGGCAGCTATCTTGAGGATAGCATATATGTGGTGTACTTTTTTGTTAGTTCACTTTGAAGATGTGTGCATAAGCTGTCCTTAGTGGCATCTCACTACTGTTCATATGTTGCGCTATGGAAGTAAAATTTTATTGATTTCTACCGTCAGCTGATTACTTTTCTTCATTTCAAAGCTTGTTTAATTTCTTTCTCTAATTTCAGAAATTTGAATACTTGGCTGTGTGAGATATATTGAACCAGTAAATCCTTCATTGAGGAAGTTCATTCGTTCCATTGGCATGAAGTTGGAAGCTGTAGACACGGTACTCATGATTTGAAATTATGTTGATTTGTTTAAAATTGGGTGTCCCTAAGGGGTGGCACAGTGGTTGAAGACTTGGGCGTTAAAGGTATGCTCTCCTCAAGGTCTCAGGTTCGAGACTCAGTTGTGACACTATTCCTTCAATGTCTCCCGGTGCCTGGTCTAGGGACGGGCGTGGTTATTCTTGTTTCAAAAAAAAAAAAATTGGGTGTCTTGATCTTTATTATCCTAAAATTAAGATTTCATTATTTTTCATGCAACTGAAAATCATGATATAGAGCTATTTTTTATGAGTCCGACTGATAGTGGGAAAACAGTATGTTCCTTTTTAGAATAAGAAACAGTATTTCATTCCATTAACTAAAAAGAGGTGGGAAAATGTGGACCAACCCTAGTGGCCTAGTCTAGAGAGATTGTAGAAAGGTTACTGTATAAGCAAAGTAAATGTATCGCCAGTTATCTGCTCTTTTCTTTGTAATCACCTAATCATCTTGGGTCCTAAAGCATGTAGCAACCTAGAATATTGAAATTCCGCAAGTTTCTTTTCATCAGGTCTTGGTGATGGTCTCAGGTTCGAGACTGGATGAACTTAAAAATAAAAACCCTTGATATCTTCCGTTCCTGGGACTTGAGACTGGCATGGGTACCCCTGGATATAAGTGAGCAACGCTTTGACTTCCCGATCATAAAAAAATCCACAAGTTTCTTAGAAAACCGACTGCTGCAGGGTAATCTTGTTGTGCTAGTTATTGGAAATTGAGTGATCTGAATCATAGGTTGTATCTGAGAATAAAGTTAAGTTCAAGAAATAATACCTTTACAGCCCAAATGAAATCAGATTTTAGACCTATGTTTGTCCTAGAAGAAACTAAGTAGGCTGTTGTTGAGTAAAATTATCAATTACAATGCTCATCTGGGAACTTGCTTCTTGCTAGTTTGAACTGTGGGCTGATGTAGAACGCTCTCGCCCTACTTGAATTTTTTTTTTCTTATTAAGAAAATAGAAATTAAGATCACCAGGCTCGTTTAGGTTCTTGCATTTTTTTTTAAACCAGGAAATCAGAGCTTTGTTCCACTATACTTAGGGTAACTATGTCCATTCCTTAGCCAAGCACCGAGAGACATCAAAGGAATGGAGACACGGGAGGTGTCTACAAATTAATATCACGGATGAGCCTCGAACTTGGAACCTTAAGAAGAGCACATCTTCAAATCTCAAACCTTCGACCACCGTGTCATCCCTTTGGGACTTTTGCATTTCGTTATTGTTTTGACAGCCTCAAGTGAACTCGATTATTTTCTAAATTTAATTAGTTTTTGACATGATGACCAATTGGTTACTCGTGCCATTGGTTCAATGGTCACCCTCTCTTTCTCTCTTGGGGATCTTCTATTAGAGGACATGGGAGAAGCCTCCTTGTATTACTCTTTGAGACAGAGAGAATGCCATATCCAGCAGTGCTTGTATTATGAATTTTCTGTAGGAACCTAATCCATATTTATTTAATACTGAGGGTAAATCAGATATAGGAAGGGAATGTTAACTCTAATGGCAAAGCGCTCTTACACTTTTTCAACCTCTCGTTTATTTTCTCGAGTTCAAAAACATATGGGGTGTAGGAATTTGAACTTTTAATCTCTTGGTTATTGTTCGTTATACCAACAAACTTCTTTTATTTGCAGAGAAATGCGGCATCGACACATAACATTCTAAATGAGGAAGGTAGAATTGTAGCTGCAGCTCTTTTGCCTTATGGAGTTTCTTCATAA

mRNA sequence

ATGGCGGGGAGACAGAAAGCGGCGGCGACGCTGCCGAATCTCATCGGAAGTTTGAAGAAAGATCGCCGGAGGGCCGGTCTACGCCCGCCTCTGCCGTCGTTGAGACGCGCATTTTCGCTTTATGATCAGATCAATCTCATCGACAATGTTCCCGAAGATCAGCTTCGCTTTCAAGGGTATACTGAAACGGGTTTTACTGTGAATCGAGTGGATTATGAGGGGAGCTTGCTATGTGTTGGGAATTTGTTGATGTCTTGGAGCCCTAAGAATTTTTTAGAGATTACGCCTGAGAGCTTATCTATTTTCCAGATTCTGCGCCCGCGCCATATTCCAGGTAAAATATGGATACTCAACTCGATCAATCGGCCGATATTACTGTTATTCGAAAGAGTTAGCTGGCAGGGATATATTGAACCAGTAAATCCTTCATTGAGGAAGTTCATTCGTTCCATTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCATCGACACATAACATTCTAAATGAGGAAGGTAGAATTGTAGCTGCAGCTCTTTTGCCTTATGGAGTTTCTTCATAA

Coding sequence (CDS)

ATGGCGGGGAGACAGAAAGCGGCGGCGACGCTGCCGAATCTCATCGGAAGTTTGAAGAAAGATCGCCGGAGGGCCGGTCTACGCCCGCCTCTGCCGTCGTTGAGACGCGCATTTTCGCTTTATGATCAGATCAATCTCATCGACAATGTTCCCGAAGATCAGCTTCGCTTTCAAGGGTATACTGAAACGGGTTTTACTGTGAATCGAGTGGATTATGAGGGGAGCTTGCTATGTGTTGGGAATTTGTTGATGTCTTGGAGCCCTAAGAATTTTTTAGAGATTACGCCTGAGAGCTTATCTATTTTCCAGATTCTGCGCCCGCGCCATATTCCAGGTAAAATATGGATACTCAACTCGATCAATCGGCCGATATTACTGTTATTCGAAAGAGTTAGCTGGCAGGGATATATTGAACCAGTAAATCCTTCATTGAGGAAGTTCATTCGTTCCATTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCATCGACACATAACATTCTAAATGAGGAAGGTAGAATTGTAGCTGCAGCTCTTTTGCCTTATGGAGTTTCTTCATAA

Protein sequence

MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGYTETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSINRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAALLPYGVSS
Homology
[Close]
BLAST of Sed0018381 vs. NCBI nr
Match: XP_022964366.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata])

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 146/188 (77.66%), Postives = 154/188 (81.91%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI S++KDRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN +DYEGSLLCVGNLLMSWSPK F EITPESLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        YIEPVNP LR+FIRS GMKLEAVD+RNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYIEPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. NCBI nr
Match: XP_023513625.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo] >KAG6593730.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269.6 bits (688), Expect = 2.0e-68
Identity = 146/188 (77.66%), Postives = 154/188 (81.91%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI S++KDRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN +DYEGSLLCVGNLLMSWSPK F EITPESLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        YIEPVNP LR+FIRS GMKLEAVD+RNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. NCBI nr
Match: XP_038906819.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida])

HSP 1 Score: 269.2 bits (687), Expect = 2.6e-68
Identity = 147/188 (78.19%), Postives = 152/188 (80.85%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI SL+ DRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN VDYEGSLLCVGNLLMSWSPK F EITPESLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        Y EPVNP LR+FIRS GMKLEAVDTRNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILIL----GCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. NCBI nr
Match: XP_023000217.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita maxima])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 144/188 (76.60%), Postives = 153/188 (81.38%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI S++KDRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN +DYEGSLLCVG+LLMSWSPK F EITPESLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        YIEPVNP LR+FIRS GMKLEAVD+RNA ST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYIEPVNPELRQFIRSTGMKLEAVDSRNATSTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. NCBI nr
Match: XP_008460070.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo] >KAA0039965.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66
Identity = 142/188 (75.53%), Postives = 151/188 (80.32%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLP+LI +LK DRR+ G   PLPSLRRAFSLYDQINLIDNVP+DQLRFQ Y
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN VDYEGSLLCVGNLLMSWSPK F EITP+SLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        Y EPVNP LR+FIRS GMKLEAVDTRNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. ExPASy Swiss-Prot
Match: Q6DFN1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = 0 

Query: 60  YTETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNS 119
           Y+  GF +N     G    +   ++ W+  ++ +I  ESLS+F +L PR    +I ++ +
Sbjct: 68  YSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRI---EILVVGT 127

Query: 120 INRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAA 179
            +R              +E ++P++ KF+R  G+ +E  DT NA +T N L  E RI AA
Sbjct: 128 GDR--------------VERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAA 174

Query: 180 ALLP 184
           AL+P
Sbjct: 188 ALIP 174

[Close]
BLAST of Sed0018381 vs. ExPASy Swiss-Prot
Match: O08776 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus OX=10116 GN=Ndufaf3 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.3e-09
Identity = 40/141 (28.37%), Postives = 67/141 (47.52%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQGYTETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIF 102
           +I+L+ N     +    Y   GFT+N     G    +   ++ W+  +  +IT ES SIF
Sbjct: 47  RISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIF 106

Query: 103 QILRPRHIPGKIWILNSINRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRN 162
            +L PR    +I ++ + N+               E ++  + + +R  G+ +E  DT N
Sbjct: 107 WMLEPRI---EIVVVGTGNK--------------TERLHSQVLQAMRQRGIAVEIQDTPN 166

Query: 163 AASTHNILNEEGRIVAAALLP 184
           A +T N L  EGR+  AAL+P
Sbjct: 167 ACATFNFLCHEGRVTGAALIP 170

[Close]
BLAST of Sed0018381 vs. ExPASy Swiss-Prot
Match: Q2HJI2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus OX=9913 GN=NDUFAF3 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 39/141 (27.66%), Postives = 67/141 (47.52%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQGYTETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIF 102
           +I+L+       +    Y+  GF VN     G    +   ++ W+  ++ +IT ES S+F
Sbjct: 46  RISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLF 105

Query: 103 QILRPRHIPGKIWILNSINRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRN 162
            +L PR    +I ++ + +R               E + P + + +R  G+ +E  DT N
Sbjct: 106 WMLEPRI---EIVVVGTGDR--------------TERLQPHVLRAMRQRGIAVEVQDTPN 165

Query: 163 AASTHNILNEEGRIVAAALLP 184
           A +T N L  EGR+  AAL+P
Sbjct: 166 ACATFNFLCHEGRVTGAALIP 169

[Close]
BLAST of Sed0018381 vs. ExPASy Swiss-Prot
Match: A1L1F1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio rerio OX=7955 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.6e-06
Identity = 33/124 (26.61%), Postives = 61/124 (49.19%), Query Frame = 0 

Query: 60  YTETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNS 119
           Y+  GF +N     G    +   ++ W+  +  +I+ ESLS+F +L P+    ++ +L +
Sbjct: 62  YSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQI---EVLVLGT 121

Query: 120 INRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAA 179
             R               E ++  + + ++  G+ +E  DT NA +T N L+ E R+ AA
Sbjct: 122 GAR--------------TERLHAEVLEELKKRGIAVEVQDTPNACATFNFLSSEKRLAAA 168

Query: 180 ALLP 184
           AL+P
Sbjct: 182 ALIP 168

[Close]
BLAST of Sed0018381 vs. ExPASy TrEMBL
Match: A0A6J1HIQ3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111464400 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 9.7e-69
Identity = 146/188 (77.66%), Postives = 154/188 (81.91%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI S++KDRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN +DYEGSLLCVGNLLMSWSPK F EITPESLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        YIEPVNP LR+FIRS GMKLEAVD+RNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYIEPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. ExPASy TrEMBL
Match: A0A6J1KD25 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111494507 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 144/188 (76.60%), Postives = 153/188 (81.38%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI S++KDRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN +DYEGSLLCVG+LLMSWSPK F EITPESLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        YIEPVNP LR+FIRS GMKLEAVD+RNA ST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYIEPVNPELRQFIRSTGMKLEAVDSRNATSTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. ExPASy TrEMBL
Match: A0A5A7TES8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002470 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.6e-66
Identity = 142/188 (75.53%), Postives = 151/188 (80.32%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLP+LI +LK DRR+ G   PLPSLRRAFSLYDQINLIDNVP+DQLRFQ Y
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN VDYEGSLLCVGNLLMSWSPK F EITP+SLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        Y EPVNP LR+FIRS GMKLEAVDTRNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. ExPASy TrEMBL
Match: A0A1S3CB84 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo OX=3656 GN=LOC103498992 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.6e-66
Identity = 142/188 (75.53%), Postives = 151/188 (80.32%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLP+LI +LK DRR+ G   PLPSLRRAFSLYDQINLIDNVP+DQLRFQ Y
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN VDYEGSLLCVGNLLMSWSPK F EITP+SLSIFQI+RP  IP         
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRP--IP--------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
              IL+L        Y EPVNP LR+FIRS GMKLEAVDTRNAAST+NILNEEGRIVAAA
Sbjct: 121 --EILVL----GCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 171

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 171

[Close]
BLAST of Sed0018381 vs. ExPASy TrEMBL
Match: A0A6J1DND7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia OX=3673 GN=LOC111022818 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65
Identity = 139/188 (73.94%), Postives = 150/188 (79.79%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA RQKA ATLPNLI SL+KDRRR GL  PLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
           TETGFTVN VDYEGSLLCVGNLLMSWSP+ F EIT ES  +F   R       +++L+ I
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESXXLFLTWR------LVYLLSLI 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
           +  +LL         Y EPVNP LR+FIRS GMKLEAVDTRNAAST+NILNEEGRIVAAA
Sbjct: 121 SEILLL-----GCGKYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 177

Query: 181 LLPYGVSS 189
           LLPYGVSS
Sbjct: 181 LLPYGVSS 177

[Close]
BLAST of Sed0018381 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 217.6 bits (553), Expect = 8.4e-57
Identity = 122/189 (64.55%), Postives = 141/189 (74.60%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKD-RRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQG 60
           MA RQKA ATLP LI S++ +  ++  L   LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAVRQKAMATLPKLIQSMRNEVTKQPSL--VLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNS 120
           + ET FTVN V YEGSLLCVGNLLMSWSP+ F +IT +SLSIFQ +RP            
Sbjct: 61  FDETSFTVNGVKYEGSLLCVGNLLMSWSPRYFSDITTDSLSIFQTVRP------------ 120

Query: 121 INRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAA 180
              P LL+   V    Y  P+NP +R+F++SIGMKLE VD+RNAAST+NILNEEGRIVAA
Sbjct: 121 --IPELLI---VGCGRYNHPLNPQVRQFVKSIGMKLETVDSRNAASTYNILNEEGRIVAA 170

Query: 181 ALLPYGVSS 189
           ALLPYGV+S
Sbjct: 181 ALLPYGVTS 170

[Close]
BLAST of Sed0018381 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 119/188 (63.30%), Postives = 139/188 (73.94%), Query Frame = 0 

Query: 1   MAGRQKAAATLPNLIGSLKKDRRRAGLRPPLPSLRRAFSLYDQINLIDNVPEDQLRFQGY 60
           MA R K+ ATLP LI S++K+  +    P LPSLRRAFSLYDQINLIDNVPEDQLRFQ +
Sbjct: 1   MAMRLKSMATLPKLIQSMRKEVPKHS-NPVLPSLRRAFSLYDQINLIDNVPEDQLRFQEF 60

Query: 61  TETGFTVNRVDYEGSLLCVGNLLMSWSPKNFLEITPESLSIFQILRPRHIPGKIWILNSI 120
            +T FTVN V YEGSLLCVGNLLMSWSP+ F EIT +SLSIFQ +RP             
Sbjct: 61  NDTSFTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRP------------- 120

Query: 121 NRPILLLFERVSWQGYIEPVNPSLRKFIRSIGMKLEAVDTRNAASTHNILNEEGRIVAAA 180
             P LL+   V     I PV P +R+F++S+GMKLE VD+RNAAST+NILNEEGR+VAAA
Sbjct: 121 -IPELLI---VGCGRDIHPVTPEVRQFVKSLGMKLETVDSRNAASTYNILNEEGRVVAAA 170

Query: 181 LLPYGVSS 189
           LLPYGV+S
Sbjct: 181 LLPYGVTS 170

The following BLAST results are available for this feature:
BLAST of Sed0018381 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964366.12.0e-6877.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_023513625.12.0e-6877.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_038906819.12.6e-6878.19NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benin... [more]
XP_023000217.12.2e-6776.60NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_008460070.15.4e-6675.53PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-... [more]
BLAST of Sed0018381 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DFN12.0e-1031.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus ... [more]
O087768.3e-0928.37NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus n... [more]
Q2HJI21.4e-0827.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taur... [more]
A1L1F16.6e-0626.61NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio re... [more]
BLAST of Sed0018381 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HIQ39.7e-6977.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A6J1KD251.1e-6776.60NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A5A7TES82.6e-6675.53NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A1S3CB842.6e-6675.53NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A6J1DND71.3e-6573.94LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia... [more]
BLAST of Sed0018381 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60150.18.4e-5764.55Protein of unknown function (DUF498/DUF598) [more]
AT2G44525.11.1e-5663.30Protein of unknown function (DUF498/DUF598) [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 58..182
e-value: 9.5E-19
score: 67.5
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 1..188
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 46..131
e-value: 3.7E-6
score: 28.8
coord: 134..186
e-value: 7.1E-14
score: 53.8
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 137..184
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 44..108
NoneNo IPR availablePANTHERPTHR21192:SF4BNAC04G03830D PROTEINcoord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018381.1Sed0018381.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005634 nucleus