Sed0018322 (gene) Chayote v1

Overview


Name	Sed0018322
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG01: 18775257 .. 18778326 (-)
RNA-Seq Expression	Sed0018322
Synteny	Sed0018322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCACCGTTTCGTCAAAAACCCCCCAAAGAAAAGGCAGCGCCAGAGTCTTCTTCTCGAAACTAGGGGTTGAGGCGAAAGGAATAAGCAGCGATGTTGAAGTTCCTGTCCAAAGTGAAGATCGAATTCAATGCCATGGATCCACGCTTAGCGTCTTGCATGGAGTTCTTGGCGCAGTGCAATGCTCGCAAGGCCAAGGAATCCAACCCCGCTTGCCAGTTGATCGTCAAGCGCCGAACCGACGACCACCCGCCCCAGATCGCCGTCACCTTCGTCAATGGAGTCGAACAGGTTTTCGACGCTACTTCCACTCCCGCCCAGACGATCAGGAACATGATTCTTGAAAAGGGTCAACTCCTTGAGACCGAGCAGATGTTCCGAGAAGCTGGAGAAGCTTGGCCGGTTATCATTCCCGAAGACGAGCTTAATCAACCTCCTCCCAGTATTAAGGTTCGTGTTTTTGTTATTCTTTACTTGGAACGTTTCTGGTTCTCTTTTTTTTGAGTTTTCATTTTGGTACTGGATATGTCATTTTGTCGAACAATATGTGTGCACGATGAGTTTTCTTATTTTAGAATGAATTTTTGCGGCTTTTGATTATGTTGTCAGCATATATATGGATATTTTGTTGAAATGTGTTTTCCACACTTGTGCTGTTTTGTCTTCTGCATCTCAAACTAATGTAAGAAATACCCAAATGTTTGTCCTAGAGGGCCCATTGGGCGCATTAAGGCACAATGACCCTTTGGAGCCTGAGGCGCAAGGTACACCAAAAGGCGAGGGTTTTTTTTTATTTAAGGTGCACTATATAAAAAAACACAAAAAATTTATATATATATATGTGTGTGTGTGTATATGTGCGCCTTTTGGTGTCTGGGGCTTCACGTAAGGTGCCTTAAGGCACGCGTCTTATTACACGCGCCTAAGGTGGGACTTGAGCCCAGGCGCGCCTTTTAAAACAATGTGTGCGTTGTGTTACACCATGTGTGTTGATATGAATTACACTCTCAAAATGATCTATTATTTACTTATCGATGATTAATATTGCCCTGTTGTTGAGTTTTCTGATTCATTGAACAAATTTATGGTCTTTTAAGCACGTTGAGTTGTACAGTTTAAGTTTCTTCTTCTAGGCCTCACTTAGATTTGTGGGAATTGCTTACTTTCTCTTTTTCACTGATGATCTTCTGTATTAGGTGACGGCTATCGTTTTCTTGTGGTTTGTTTAAAATGCTAATATATAGCCTTCCAGCTTTTGCTGAGCTACTGTCATAGTTAATAGTTTTCATGAGAATGCTTGTGGTGTGACTGCATATTTTAATCTTGAACCAATTTCAAACAAGCAAATAGGCGACAGACGAACATTAGTCAACCTTCTTTGGAGTAATTCGGTTTCGTTTATATTCTTATTATCTAAGTTGTGCTTCATACTGGATCACCTTTTCTGTGGTGTTTTCTTTATAATAAACCAAGCATTCATCGAAAAAAATTCAATTGAGTAAAGTAACACCCAGAGAACAATTACAAAAAAAAGAGAAAAGAAATGGAGGTTCAAAGAGAAAAGTTTAATAAGGGCTCAAACATCATCCAAAGATATCTCCATCCCTTTAAAAACTCTATATTTCTCTCTCCCTACAAAATTACACATTCCAGCTTGCCATAGAAAACTTAAAAAACAGTTCAACACCTCTGCGGCCATCTCATAGTGCAAGAGAAGATGATCAAGATCATTTGTTGCTCCTTGCACATGACGCAACACACATGCCACATGAAGGAATGAATCTTCCTCAAAATCCTTTCTAAAGTATTAATCCTATCATGAAGAACATGCCAAGTATAAAATCTTAACCGTCTTTGAAATTTTCACCATTCGTAATGAAGCAAAAGTCAAATTCCCACCAAAGAAGAGGAATTCACCCGACAGTGATAATAGAATTGACATGAGAAATGCTTAGACGGGCTAGTATCCCAACCACGAACATCCTACATCCCAAATTGTAGCAAATCCCTCAGTAAAGAAAGTAAAGTGACAAGGTCCCGGATGAGAAAGAACATCTGCCACATGGTGGTGCTCCATAAGAGGTAAATAGAACAGGTGAGGAAACACCAGGCCAAGGGGTCTATCCCCCATCCTCTTTTCTTTCCAGAAAAAAATATCTCTCTCATCTCATCCTACGAGAAAGAAGATAGAAAATAAAGTATACTCCTTAGCAATGTCTTTTAAAATGTTCCTAGAGATGTCTTGACCCCCACACACCTGCCACTCAAAAGGGAGTGGTTCATACTTGTACACAATGATCTTGTGCCAATGCCATAACCATTTAGCCAATAAGGCTCTATTGACAATACTAATGTGAGATTCAAACCTCTAAATCACTTTGATCCAGGGTATATGCTTTTTGCAAGTGGATCCTACTATATTTGGTTGATAGAAAACACGTAAGACAATAAATTCTAGTTAGGTGGTTATTACAGATTAAACTCATTCTTTCTTAGTTTTTTCAAGGTCCCTTTGACCGCAAGACCACCCCATGATAGATTATCATTTGTAAAAGTACGGAACTTCTTCATTTGTACTTTTACACCAAAGTTCGGTCACAAATCTGTTTTTCTGCTCTTTAAGTTGTCTGCTGCATTTGAATGTCTTGTAATTGTCTAACGCCCTGTGTGCTTTTTTGCAGCCTAGAAAAGCGGAAGAGAAGCAGTAACTCTTTGTCTCTCAATTGATCAAATTACGGATGTGCCTGAAAAAGAGGGAGTGCATACTACTGTCCTCACAATAATAATAGAATCAATTTCTGTGAAGTAAAAGTGCTGATTCTGAGATTGTTTTTTGTTCTATATTTCCTAGGGATGTTTGCTAGTTTTTTTGCTTCTTAGATGTGAAAGAATTCCCCATCAAGTTCTAAACATGGTCTGTGGATTTTCATGAGCCATTTATTTATGTGATCTTGTTACCAATATTTGCTTTGTATGAGTTTGAAATTCACTCCGCCAAGACTTCAAACTTTCACTTTGTTTTAGCTCAACTACAATATCTAGTGATTCGAATCCTTGACCTCTTGGTCAAAG

mRNA sequence

CGCACCGTTTCGTCAAAAACCCCCCAAAGAAAAGGCAGCGCCAGAGTCTTCTTCTCGAAACTAGGGGTTGAGGCGAAAGGAATAAGCAGCGATGTTGAAGTTCCTGTCCAAAGTGAAGATCGAATTCAATGCCATGGATCCACGCTTAGCGTCTTGCATGGAGTTCTTGGCGCAGTGCAATGCTCGCAAGGCCAAGGAATCCAACCCCGCTTGCCAGTTGATCGTCAAGCGCCGAACCGACGACCACCCGCCCCAGATCGCCGTCACCTTCGTCAATGGAGTCGAACAGGTTTTCGACGCTACTTCCACTCCCGCCCAGACGATCAGGAACATGATTCTTGAAAAGGGTCAACTCCTTGAGACCGAGCAGATGTTCCGAGAAGCTGGAGAAGCTTGGCCGGTTATCATTCCCGAAGACGAGCTTAATCAACCTCCTCCCAGTATTAAGCCTAGAAAAGCGGAAGAGAAGCAGTAACTCTTTGTCTCTCAATTGATCAAATTACGGATGTGCCTGAAAAAGAGGGAGTGCATACTACTGTCCTCACAATAATAATAGAATCAATTTCTGTGAAGTAAAAGTGCTGATTCTGAGATTGTTTTTTGTTCTATATTTCCTAGGGATGTTTGCTAGTTTTTTTGCTTCTTAGATGTGAAAGAATTCCCCATCAAGTTCTAAACATGGTCTGTGGATTTTCATGAGCCATTTATTTATGTGATCTTGTTACCAATATTTGCTTTGTATGAGTTTGAAATTCACTCCGCCAAGACTTCAAACTTTCACTTTGTTTTAGCTCAACTACAATATCTAGTGATTCGAATCCTTGACCTCTTGGTCAAAG

Coding sequence (CDS)

ATGTTGAAGTTCCTGTCCAAAGTGAAGATCGAATTCAATGCCATGGATCCACGCTTAGCGTCTTGCATGGAGTTCTTGGCGCAGTGCAATGCTCGCAAGGCCAAGGAATCCAACCCCGCTTGCCAGTTGATCGTCAAGCGCCGAACCGACGACCACCCGCCCCAGATCGCCGTCACCTTCGTCAATGGAGTCGAACAGGTTTTCGACGCTACTTCCACTCCCGCCCAGACGATCAGGAACATGATTCTTGAAAAGGGTCAACTCCTTGAGACCGAGCAGATGTTCCGAGAAGCTGGAGAAGCTTGGCCGGTTATCATTCCCGAAGACGAGCTTAATCAACCTCCTCCCAGTATTAAGCCTAGAAAAGCGGAAGAGAAGCAGTAA

Protein sequence

MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTFVNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKPRKAEEKQ

Homology

[Close]

BLAST of Sed0018322 vs. NCBI nr
Match: XP_022982466.1 (uncharacterized protein LOC111481279 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIR  ILEKGQLLETEQMFREAGE WPVIIP++ELN PPPSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRTRILEKGQLLETEQMFREAGETWPVIIPDEELNHPPPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. NCBI nr
Match: XP_022974805.1 (uncharacterized protein LOC111473560 isoform X1 [Cucurbita maxima] >XP_022974806.1 uncharacterized protein LOC111473560 isoform X1 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLPSCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQITVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIRNMILEKGQLLETEQMFREAGE WPVIIP++ELNQP PSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPVIIPDEELNQPAPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. NCBI nr
Match: XP_022940323.1 (uncharacterized protein LOC111445972 [Cucurbita moschata] >XP_023525771.1 uncharacterized protein LOC111789284 [Cucurbita pepo subsp. pepo] >KAG6608580.1 hypothetical protein SDJN03_01922, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037896.1 hypothetical protein SDJN02_01527 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 117/127 (92.13%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKV+IEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTF
Sbjct: 1   MLKFLSKVRIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQITVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIR MILEKGQLLETEQMFREAGE WPVIIP++ELN PPPSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRTMILEKGQLLETEQMFREAGETWPVIIPDEELNHPPPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. NCBI nr
Match: XP_022139291.1 (uncharacterized protein LOC111010210 [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 4.4e-59
Identity = 117/127 (92.13%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIRNMILEKGQLLETEQMFREAGE WP++IPE+EL QP PSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPIVIPEEELRQPTPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. NCBI nr
Match: KAG6591283.1 (hypothetical protein SDJN03_13629, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.9 bits (603), Expect = 9.7e-59
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTP QTIRNMILEKGQLLETEQMFREAGE WPVIIP++ELNQP PSIKP
Sbjct: 61  VNGVEEVFDATSTP-QTIRNMILEKGQLLETEQMFREAGETWPVIIPDEELNQPAPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 126

[Close]

BLAST of Sed0018322 vs. ExPASy TrEMBL
Match: A0A6J1IEW0 (uncharacterized protein LOC111473560 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473560 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-60
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLPSCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQITVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIRNMILEKGQLLETEQMFREAGE WPVIIP++ELNQP PSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPVIIPDEELNQPAPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. ExPASy TrEMBL
Match: A0A6J1IZE5 (uncharacterized protein LOC111481279 OS=Cucurbita maxima OX=3661 GN=LOC111481279 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.2e-60
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIR  ILEKGQLLETEQMFREAGE WPVIIP++ELN PPPSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRTRILEKGQLLETEQMFREAGETWPVIIPDEELNHPPPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. ExPASy TrEMBL
Match: A0A6J1FNY6 (uncharacterized protein LOC111445972 OS=Cucurbita moschata OX=3662 GN=LOC111445972 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.5e-60
Identity = 117/127 (92.13%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKV+IEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQI VTF
Sbjct: 1   MLKFLSKVRIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQITVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIR MILEKGQLLETEQMFREAGE WPVIIP++ELN PPPSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRTMILEKGQLLETEQMFREAGETWPVIIPDEELNHPPPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. ExPASy TrEMBL
Match: A0A6J1CC86 (uncharacterized protein LOC111010210 OS=Momordica charantia OX=3673 GN=LOC111010210 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-59
Identity = 117/127 (92.13%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDQPPQIAVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIRNMILEKGQLLETEQMFREAGE WP++IPE+EL QP PSIKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPIVIPEEELRQPTPSIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. ExPASy TrEMBL
Match: A0A0A0LGG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866470 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 115/127 (90.55%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKVKIEFNA+DPRLA CMEFLAQCNA KAKESNPACQLIVKRRTDDHPPQIAVTF
Sbjct: 1   MLKFLSKVKIEFNALDPRLACCMEFLAQCNASKAKESNPACQLIVKRRTDDHPPQIAVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+VFDATSTPAQTIR+MILEKGQLLETEQMFREAGEAWPVIIP++EL QP   IKP
Sbjct: 61  VNGVEEVFDATSTPAQTIRSMILEKGQLLETEQMFREAGEAWPVIIPDEELKQPFTGIKP 120

Query: 121 RKAEEKQ 128
           RKAE+KQ
Sbjct: 121 RKAEDKQ 127

[Close]

BLAST of Sed0018322 vs. TAIR 10
Match: AT5G39600.1 (CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-52
Identity = 98/127 (77.17%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MLKFLSKVKIEFNAMDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDHPPQIAVTF 60
           MLKFLSKV+IEFN +DPRLASC+EFLAQCNARKAKESNP CQ++VKRRTD+ PPQI VTF
Sbjct: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 60

Query: 61  VNGVEQVFDATSTPAQTIRNMILEKGQLLETEQMFREAGEAWPVIIPEDELNQPPPSIKP 120
           VNGVE+ FDA +T AQ+IR MIL+KGQ LETEQMFREAGE WPVIIP++EL Q  P +KP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 120

Query: 121 RKAEEKQ 128
           RKAE+K+
Sbjct: 121 RKAEDKK 127

The following BLAST results are available for this feature:

BLAST of Sed0018322 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982466.1	1.5e-59	92.91	uncharacterized protein LOC111481279 [Cucurbita maxima]	[more]
XP_022974805.1	1.5e-59	92.91	uncharacterized protein LOC111473560 isoform X1 [Cucurbita maxima] >XP_022974806...	[more]
XP_022940323.1	2.0e-59	92.13	uncharacterized protein LOC111445972 [Cucurbita moschata] >XP_023525771.1 unchar...	[more]
XP_022139291.1	4.4e-59	92.13	uncharacterized protein LOC111010210 [Momordica charantia]	[more]
KAG6591283.1	9.7e-59	93.70	hypothetical protein SDJN03_13629, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0018322 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0018322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IEW0	7.2e-60	92.91	uncharacterized protein LOC111473560 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IZE5	7.2e-60	92.91	uncharacterized protein LOC111481279 OS=Cucurbita maxima OX=3661 GN=LOC111481279...	[more]
A0A6J1FNY6	9.5e-60	92.13	uncharacterized protein LOC111445972 OS=Cucurbita moschata OX=3662 GN=LOC1114459...	[more]
A0A6J1CC86	2.1e-59	92.13	uncharacterized protein LOC111010210 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0LGG5	4.4e-57	90.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866470 PE=3 SV=1	[more]

BLAST of Sed0018322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39600.1	1.1e-52	77.17	CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR01...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019716	Ribosomal protein L53, mitochondrial	PFAM	PF10780	MRP_L53	coord: 12..63 e-value: 2.9E-12 score: 46.6
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..99 e-value: 7.6E-23 score: 82.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..127
None	No IPR available	PANTHER	PTHR33618	39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018322.1	Sed0018322.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005762	mitochondrial large ribosomal subunit