Homology
BLAST of Sed0018321 vs. NCBI nr
Match:
XP_022140090.1 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momordica charantia] >XP_022140091.1 putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momordica charantia] >XP_022140093.1 putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momordica charantia])
HSP 1 Score: 1046.6 bits (2705), Expect = 9.1e-302
Identity = 527/665 (79.25%), Postives = 579/665 (87.07%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSST--------LNTHQKFSNNRPVIL 60
M WRHGR+LF IA + LR+ AHQS KCSTPLV+ T N +K+S VIL
Sbjct: 1 MKWRHGRSLFQIAPRQFLRTLAHQSGPKCSTPLVNLTEKLHNRLNQNAERKYSEKGQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TNELV++TLLNCPSDL+AL+FFL CAKQPDFFH+A AFDYMVGVVSRLM+RYETV GV+G
Sbjct: 61 TNELVHTTLLNCPSDLVALSFFLWCAKQPDFFHSATAFDYMVGVVSRLMKRYETVNGVVG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFD MG CGFTPNTFARN+I+DVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDQMGHCGFTPNTFARNVIVDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKET LPNFLTFNIVLCNLSKIKD VGI DA R ML+MGYYPN GTFE VLN
Sbjct: 181 RADVALKVFKETPLPNFLTFNIVLCNLSKIKDFVGIGDAVRRMLRMGYYPNPGTFEGVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
C CK GRLAEAYQVLG+MTT GISMS IWTI+VDGFCR HR ADASSLVKKM+++GC P
Sbjct: 241 CFCKLGRLAEAYQVLGIMTTLGISMSVNIWTIIVDGFCRLHRTADASSLVKKMKRTGCFP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIK Y+ A L S+A VLSII+ EG+SPDRV YNVLIDSLAKIGRY +ALS+F
Sbjct: 301 NIVTYTTLIKAYLEAQLFSDASSVLSIIESEGHSPDRVLYNVLIDSLAKIGRYDKALSIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LSLDK+NI PDSYTFSSLLNVICLSK FFLLPKLVDGFFVE DLVACNSLL+YL KAGFP
Sbjct: 361 LSLDKQNIYPDSYTFSSLLNVICLSKMFFLLPKLVDGFFVEADLVACNSLLNYLSKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
SLA+ELYDEMLDKGLMPDKYSVLGVL GLC SRRIDEAVH+YNGILL++T VDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCGSRRIDEAVHLYNGILLNHTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
IDGL+KAGKCHSAIRVFR+ LLE NSLDVVS++V IRGLLM R TEA +LYN+MKEVGI
Sbjct: 481 IDGLIKAGKCHSAIRVFRKTLLEENSLDVVSFTVGIRGLLMVSRHTEALNLYNHMKEVGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNGHICN+ML +FCKE+N ESV+QMLQEMIDLRIEMSCNN RLC AICRSSYNS +VI
Sbjct: 541 NPNGHICNLMLFNFCKERNLESVEQMLQEMIDLRIEMSCNNFVRLCNAICRSSYNSRLVI 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
LLI+M DLGLL KLAC ILV KP K VNV EKHH++LN CIE+GLFG TSGSE+ T+V
Sbjct: 601 YLLIEMRDLGLLPAKLACKILVHKPPKVVNVFEKHHELLNGCIEYGLFGYTSGSEEYTDV 660
BLAST of Sed0018321 vs. NCBI nr
Match:
XP_023001025.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001026.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001027.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001028.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001029.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima])
HSP 1 Score: 1029.2 bits (2660), Expect = 1.5e-296
Identity = 517/665 (77.74%), Postives = 578/665 (86.92%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIWRHG N+F IAS + LR+FAHQ KCS L++ T N H QKFS NR VIL
Sbjct: 1 MIWRHGCNIFRIASRQILRTFAHQPYRKCSASLINLTKNLHNQLNEDIEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TNELV++TLL C SDL+ L+FF+ CAKQP+FFHN AF+YMVGVVSRLMERYETV G++G
Sbjct: 61 TNELVHTTLLTCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMERYETVSGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
LESVG VTKAQTFLLLLRIYWRGGMYELVFEAFDHM RCGFTPNTFARN+I+DVLFKVG
Sbjct: 121 ALESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRCGFTPNTFARNVIMDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKETLLPNFLTFNIVLCNLSKI+DL+GIRDAFRCML+MGY PN GTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYSPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRL EAYQVLG+MTT GISMS IWTIM+DG R +R +DASSLVKKMEKSGCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGLRRLNRTSDASSLVKKMEKSGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIKGYM+A LVS+AFDVLSII LEG PDRV YNVLID LAKIGRY EAL +F
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIRLEGLPPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LS+DK+NI+PD YTFSSLLN ICLSK+ FLLPKLVDGFFVE+DLVACNSLLSYL KAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFVEVDLVACNSLLSYLAKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
SLA+ELYDEMLDKGLMPDKYSVLGVL GLC+++RIDEAV++YNGILL+YT VDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
I+GL+KAGKCHSAIRVFR+ LLE +SLD VSYSVAIRGLLM GR TEAY+LYNYMKE GI
Sbjct: 481 INGLIKAGKCHSAIRVFRKKLLEKSSLDAVSYSVAIRGLLMVGRGTEAYNLYNYMKEAGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNG +CNVMLSSFCKEK+FESVKQMLQEMIDL IE+S NN FRLC AI SSYN ++V
Sbjct: 541 NPNGDMCNVMLSSFCKEKDFESVKQMLQEMIDLGIEISWNNFFRLCNAIYSSSYNFYLVS 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
+LL++M+ LGLL KLAC LV K LK+VN+SE+HHK+LN +E+ LFGDTS S++ T V
Sbjct: 601 HLLVEMKGLGLLPDKLACKTLVYKRLKAVNISEEHHKLLNGHLEYCLFGDTSSSDEYTNV 660
BLAST of Sed0018321 vs. NCBI nr
Match:
XP_023519013.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo] >XP_023519014.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo] >XP_023519015.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1015.4 bits (2624), Expect = 2.2e-292
Identity = 509/654 (77.83%), Postives = 569/654 (87.00%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIWRHG N+F IA + LR+FAHQ KCS PL++ T N H QKFS NR VIL
Sbjct: 1 MIWRHGCNIFRIAPCKILRTFAHQPHRKCSAPLINLTKNLHNQLNEDMEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TNELV++TLLNC SDL+ L+FF+ CAKQP+FFHN AF+YMVGVVSRLM+RYETV G++
Sbjct: 61 TNELVHTTLLNCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMKRYETVSGILS 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
GLESVG VTKAQTFLLLLRIYWRGGMYELVFEAFDHM R GFTPNTFARN+I+DVLFKVG
Sbjct: 121 GLESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRRGFTPNTFARNVIMDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKETLLPNFLTFNIVLCNLSKI+DL+GIRDAFRCML+MGYYPN GTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYYPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRL EAYQVLG+MTT GISMS IWTIM+DGF R HR ADASSLVKKMEKSGCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGFRRLHRTADASSLVKKMEKSGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIKGYM+A LVS+AFDVLSII+LEG SPDRV YNVLID LAKIGRY EAL +F
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIELEGLSPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LS+DK+NI+PD YTFSSLLN ICLSK+ FLLPKLVDGFF ++DLVACNSLLSYL KAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFADVDLVACNSLLSYLAKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
SLA+ELYDEMLDKGLMPDKYSVLGVL GLC+++RIDEAV++YNGILL+YT VDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
I+GL+KAGKCHSAIRVFR+NLL +SLD VSYSVAIRGLLM GR TEA +LYNYMKE GI
Sbjct: 481 INGLIKAGKCHSAIRVFRKNLLGRSSLDAVSYSVAIRGLLMVGRGTEACNLYNYMKEAGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNG +CNVMLSSFCKEK+ ESVKQMLQEMIDL IE+S NN RLC AI SSYN ++V
Sbjct: 541 NPNGDMCNVMLSSFCKEKDLESVKQMLQEMIDLGIEISWNNFCRLCNAIYSSSYNFYLVS 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGS 647
+LL++M+ LGLL KLAC LV K LK+VN+SE+HHK+LN +E+ LFGDTS S
Sbjct: 601 HLLVEMKGLGLLPDKLACKTLVYKRLKAVNISEEHHKLLNGHLEYCLFGDTSSS 654
BLAST of Sed0018321 vs. NCBI nr
Match:
XP_038894703.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g16830 [Benincasa hispida])
HSP 1 Score: 1000.0 bits (2584), Expect = 9.8e-288
Identity = 507/665 (76.24%), Postives = 569/665 (85.56%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIWRHG N+F IA + LR+FAHQS K S P ++ T N H QKFS NR VIL
Sbjct: 1 MIWRHGCNIFQIAPRQILRTFAHQSHRKWSAPFLNLTKNLHNRLDEDIEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TN+ V +TLLNC SDL+AL+FF+ CAKQP+FFHN AAFDYMVGVVSRLM+RYETV G+IG
Sbjct: 61 TNDRVLTTLLNCSSDLVALSFFMWCAKQPNFFHNTAAFDYMVGVVSRLMKRYETVNGIIG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYWRGGMY LVFEAFDHM CG+TPNTFA N+IID+LFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYNLVFEAFDHMDHCGYTPNTFAHNVIIDMLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKETL+PNFLTFNIVLCNLSKIKDL+GIRD FRCM +MGY PN GTFEVVLN
Sbjct: 181 RADVALKVFKETLMPNFLTFNIVLCNLSKIKDLIGIRDVFRCMWRMGYCPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRLAEA+QVLG+M TFG+SMS IWTIM+DG CR HR DAS LVKKME+SGCSP
Sbjct: 241 GLCKLGRLAEAHQVLGVMITFGLSMSVNIWTIMIDGLCRLHR-TDASFLVKKMERSGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVT+TTLIKGY+ A VS+AFDVLSII+ EG SPD++ YNVLIDSLAK R+ +ALS+F
Sbjct: 301 NIVTHTTLIKGYIYAKRVSDAFDVLSIIESEGPSPDQILYNVLIDSLAKNERFNDALSIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
L++DKRNI+PD YTFSSLLN ICLSK+FFLLPKLVD FFVE+DLVACNSLLSYLGKAGFP
Sbjct: 361 LNMDKRNILPDCYTFSSLLNTICLSKRFFLLPKLVDEFFVEVDLVACNSLLSYLGKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
LA+E+YDEM+DKGL PDKYSVLGVLIGLCESRRI EAV +YN ILL+YT VDAHIHTV
Sbjct: 421 LLALEVYDEMVDKGLTPDKYSVLGVLIGLCESRRIGEAVRLYNDILLNYTGVDAHIHTVT 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
IDGL+KAGK HSAIRVFR NLLE NSLDVVSYSVAI GLLM GRDTEA ++YNYMKEVGI
Sbjct: 481 IDGLIKAGKYHSAIRVFRTNLLEENSLDVVSYSVAICGLLMVGRDTEACNMYNYMKEVGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPN HICN+MLSSFCKEKNFES+KQMLQEMIDL IEMS NN FRL AICRSS + H+VI
Sbjct: 541 NPNRHICNIMLSSFCKEKNFESMKQMLQEMIDLGIEMSRNNFFRLYNAICRSSNDPHLVI 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
LLI+M+ LGLL GK AC LV K+VN++EKH+K+LN C+E+ LF DTS SE+ T+V
Sbjct: 601 CLLIEMKVLGLLPGKXACKTLVDNSPKAVNITEKHYKLLNGCLEYCLFCDTSSSEEYTDV 660
BLAST of Sed0018321 vs. NCBI nr
Match:
XP_011659004.1 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Cucumis sativus] >KGN65906.1 hypothetical protein Csa_023183 [Cucumis sativus])
HSP 1 Score: 998.8 bits (2581), Expect = 2.2e-287
Identity = 505/665 (75.94%), Postives = 568/665 (85.41%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIWR+G N+F IAS + +R+FAHQS +C+TP ++ T H QKFS NR VIL
Sbjct: 1 MIWRYGCNIFQIASRQIIRTFAHQSYRRCTTPHINLTKILHNRLDEDIEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TN+LVY+TLLNC SDLIAL+FF+ CAKQP+FFHN AAFDYMVGVVSRLM++YETV G++G
Sbjct: 61 TNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYWRGGMY+LVFEAFDHM R GFTPNTFARN+I+DVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKETLLPNFLTFNIVLCNLSK KDL+GI D FRCML+MGY PN GTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRLAEAYQV G+MTTFGISMS IWTIM+DGFCR R +ASSLVKKM+KSGCSP
Sbjct: 241 GLCKLGRLAEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIKGY+ A +S+AFDVLSII+ EG SPD + YNVLIDSLAK RY +ALS+F
Sbjct: 301 NIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LSL KRNI+PD YTFSSLLN ICLSK+ FLLPKLVDGF VE+DLVACNSLLSYLGKAGF
Sbjct: 361 LSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFA 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
+LA+ELY+ M++ GLMPDKYSVLGVL GLCESRRI EAV +YNGILL+YT VDAHIHTVI
Sbjct: 421 ALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
IDGL+KAGK HSAIR+FRRNLLE NSLDVVSYSVAIRGLL+ GR+TEA +LYNYMKE GI
Sbjct: 481 IDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNGH+CNVMLS+FCKEK F VKQMLQEMIDL I+MS NN FRL AICRSS SH+VI
Sbjct: 541 NPNGHVCNVMLSTFCKEKKFALVKQMLQEMIDLGIKMSRNNFFRLYNAICRSSNGSHLVI 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
LLI+M+ LGLL K C LV P K VN+SEKH+K+LN C+E+ L GDTS SE+ T+V
Sbjct: 601 YLLIEMKVLGLLPRKRDCETLVHNPPKDVNISEKHYKLLNGCLEYCLCGDTSSSEEYTDV 660
BLAST of Sed0018321 vs. ExPASy Swiss-Prot
Match:
Q3EDA9 (Putative pentatricopeptide repeat-containing protein At1g16830 OS=Arabidopsis thaliana OX=3702 GN=At1g16830 PE=3 SV=2)
HSP 1 Score: 406.4 bits (1043), Expect = 6.3e-112
Identity = 219/535 (40.93%), Postives = 322/535 (60.19%), Query Frame = 0
Query: 52 LTNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVI 111
LT++ VYS L P+DL L FF CAKQ ++FH+ AFD+MVGVV +L Y ++ +I
Sbjct: 37 LTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRII 96
Query: 112 GGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKV 171
L+ G K + FLLLL I+WRG +Y+ E + M GF PNT A NM++DV FK+
Sbjct: 97 ERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKL 156
Query: 172 GHSDVALKVFKETLLPNFLTFNIVL---CNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFE 231
+ AL++F+ NF +F+I L C+ DLVG++ + M+ G+YPN F
Sbjct: 157 NVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 232 VVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKS 291
+L C+ G ++EA+QV+GLM GIS+S +W+++V GF R A L KM +
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI 276
Query: 292 GCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREA 351
GCSPN+VTYT+LIKG+++ +V AF VLS + EG +PD V N++I + ++GR+ EA
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 352 LSLFLSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGK 411
+F SL+KR +VPD YTF+S+L+ +CLS +F L+P++ G + DLV N L + K
Sbjct: 337 RKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK 396
Query: 412 AGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHI 471
G+ S A+++ M K D Y+ L LC A+ +Y I+ +DAH
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 472 HTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMK 531
H+ IID L++ GK ++A+ +F+R +LE LDVVSY+VAI+GL+ R EAY L MK
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMK 516
Query: 532 EVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICR 584
E GI PN ++S CKEK E V+++L+E I +E+ N F++ + R
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
BLAST of Sed0018321 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.6e-46
Identity = 137/545 (25.14%), Postives = 257/545 (47.16%), Query Frame = 0
Query: 53 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 112
T+ + +L + P D AL F +K+P+F A ++ ++ + R ++ +K ++
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGR-SGSFDDMKKILE 108
Query: 113 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHM-GRCGFTPNTFARNMIIDV---- 172
++S TFL+L+ Y + + + + D M G P+T N ++++
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168
Query: 173 ----LFKVGHSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPN 232
L ++ H+ +++ K P+ TFN+++ L + L M G P+
Sbjct: 169 NSLKLVEISHAKMSVWGIK----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 228
Query: 233 SGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVK 292
TF V+ + G L A ++ M FG S S ++V GFC+ R+ DA + ++
Sbjct: 229 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 288
Query: 293 KM-EKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKI 352
+M + G P+ T+ TL+ G A V +A +++ ++ EGY PD YN +I L K+
Sbjct: 289 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348
Query: 353 GRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQF---FLLPKLVDGFFVELDLVAC 412
G +EA+ + + R+ P++ T+++L++ +C Q L +++ + D+
Sbjct: 349 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 408
Query: 413 NSLLSYLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILL 472
NSL+ L +AMEL++EM KG PD+++ ++ LC ++DEA+++ + L
Sbjct: 409 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 468
Query: 473 SYTRVDAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTE 532
S + +IDG KA K A +F + G S + V+Y+ I GL R +
Sbjct: 469 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 528
Query: 533 AYDLYNYMKEVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCK 585
A L + M G P+ + N +L+ FC+ + + ++Q M E L
Sbjct: 529 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 588
BLAST of Sed0018321 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 1.2e-43
Identity = 119/473 (25.16%), Postives = 229/473 (48.41%), Query Frame = 0
Query: 102 ERYETVKGVIGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFAR 161
++YE V + +ES G T +++ + R F + + G+ P+T
Sbjct: 102 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 161
Query: 162 NMIIDVLFKVGHSDVALKVFKETL----LPNFLTFNIV---LCNLSKIKDLVGIRDAFRC 221
N +++ L AL++ + P +T N + LC K+ D V + D
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR--- 221
Query: 222 MLKMGYYPNSGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHR 281
M++ G+ PN T+ VLN +CK G+ A A ++L M I + ++I++DG C+
Sbjct: 222 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 281
Query: 282 IADASSLVKKMEKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNV 341
+ +A +L +ME G +I+TY TLI G+ NA + +L + SP+ V ++V
Sbjct: 282 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 341
Query: 342 LIDSLAKIGRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFF--- 401
LIDS K G+ REA L + +R I P++ T++SL++ C + ++VD
Sbjct: 342 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 401
Query: 402 VELDLVACNSLLSYLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAV 461
+ D++ N L++ KA +EL+ EM +G++ + + ++ G C+S +++ A
Sbjct: 402 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 461
Query: 462 HIYNGILLSYTRVDAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGL 521
++ ++ R D + +++DGL G+ A+ +F + LD+ Y + I G+
Sbjct: 462 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 521
Query: 522 LMGGRDTEAYDLYNYMKEVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMID 565
+ +A+DL+ + G+ + N+M+S C++ + + ++M +
Sbjct: 522 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
BLAST of Sed0018321 vs. ExPASy Swiss-Prot
Match:
Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 179.1 bits (453), Expect = 1.6e-43
Identity = 128/471 (27.18%), Postives = 216/471 (45.86%), Query Frame = 0
Query: 128 LLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVGHSDVAL-----KVFK 187
+L+R+Y R GM + E F MG GF P+ + N I+ + K G DV++ ++ K
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSFLKEMLK 187
Query: 188 ETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLNCLCKWGRLAE 247
+ P+ TFNI++ L + M K GY P T+ VL+ CK GR
Sbjct: 188 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 247
Query: 248 AYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSPNIVTYTTLIK 307
A ++L M + G+ + +++ CR +RIA L++ M K PN VTY TLI
Sbjct: 248 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 307
Query: 308 GYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLFLSLDKRNIVP 367
G+ N V A +L+ + G SP+ V +N LID G ++EAL +F ++ + + P
Sbjct: 308 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 367
Query: 368 DSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDL-VACNSLLSYLG------KAGFPSLA 427
++ LL+ +C + +F L GF++ + C ++Y G K GF A
Sbjct: 368 SEVSYGVLLDGLCKNAEF----DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 427
Query: 428 MELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVIIDG 487
+ L +EM G+ PD + ++ G C+ R A I I + I++ +I
Sbjct: 428 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 487
Query: 488 LVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGINPN 547
+ G AIR++ +LEG++ D +++V + L G+ EA + M GI PN
Sbjct: 488 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 547
Query: 548 GHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSY 587
+ +++ + + EM + + L K +C+ +
Sbjct: 548 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593
BLAST of Sed0018321 vs. ExPASy Swiss-Prot
Match:
Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 177.6 bits (449), Expect = 4.7e-43
Identity = 139/518 (26.83%), Postives = 242/518 (46.72%), Query Frame = 0
Query: 90 FDYMVGVVSRLMERYETVKGVIGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHM 149
F + VV+R ++Y+ V + +E G T +++ R L F A +
Sbjct: 75 FSRLFSVVAR-TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 134
Query: 150 GRCGFTPNTFARNMIIDVLFKVGHSDVALKVFKETL----LPNFLTFNIV---LCNLSKI 209
+ G+ P+T + +I+ L G AL++ + P +T N + LC K+
Sbjct: 135 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 194
Query: 210 KDLVGIRDAFRCMLKMGYYPNSGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIW 269
D V + D M++ G+ PN T+ VL +CK G+ A A ++L M I + +
Sbjct: 195 SDAVLLIDR---MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 254
Query: 270 TIMVDGFCRFHRIADASSLVKKMEKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDL 329
+I++DG C+ + +A +L +ME G +I+ YTTLI+G+ A + +L +
Sbjct: 255 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 314
Query: 330 EGYSPDRVFYNVLIDSLAKIGRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQF-- 389
+PD V ++ LID K G+ REA L + +R I PD+ T++SL++ C Q
Sbjct: 315 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 374
Query: 390 ------FLLPK-----------LVDGFF-------------------VELDLVACNSLLS 449
++ K L++G+ V D V N+L+
Sbjct: 375 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 434
Query: 450 YLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRV 509
+ G +A EL+ EM+ + + PD S +L GLC++ ++A+ I+ I S +
Sbjct: 435 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 494
Query: 510 DAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLY 563
D I+ +II G+ A K A +F L+G DV +Y++ I GL G +EA L+
Sbjct: 495 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 554
BLAST of Sed0018321 vs. ExPASy TrEMBL
Match:
A0A6J1CES7 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010829 PE=4 SV=1)
HSP 1 Score: 1046.6 bits (2705), Expect = 4.4e-302
Identity = 527/665 (79.25%), Postives = 579/665 (87.07%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSST--------LNTHQKFSNNRPVIL 60
M WRHGR+LF IA + LR+ AHQS KCSTPLV+ T N +K+S VIL
Sbjct: 1 MKWRHGRSLFQIAPRQFLRTLAHQSGPKCSTPLVNLTEKLHNRLNQNAERKYSEKGQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TNELV++TLLNCPSDL+AL+FFL CAKQPDFFH+A AFDYMVGVVSRLM+RYETV GV+G
Sbjct: 61 TNELVHTTLLNCPSDLVALSFFLWCAKQPDFFHSATAFDYMVGVVSRLMKRYETVNGVVG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFD MG CGFTPNTFARN+I+DVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDQMGHCGFTPNTFARNVIVDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKET LPNFLTFNIVLCNLSKIKD VGI DA R ML+MGYYPN GTFE VLN
Sbjct: 181 RADVALKVFKETPLPNFLTFNIVLCNLSKIKDFVGIGDAVRRMLRMGYYPNPGTFEGVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
C CK GRLAEAYQVLG+MTT GISMS IWTI+VDGFCR HR ADASSLVKKM+++GC P
Sbjct: 241 CFCKLGRLAEAYQVLGIMTTLGISMSVNIWTIIVDGFCRLHRTADASSLVKKMKRTGCFP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIK Y+ A L S+A VLSII+ EG+SPDRV YNVLIDSLAKIGRY +ALS+F
Sbjct: 301 NIVTYTTLIKAYLEAQLFSDASSVLSIIESEGHSPDRVLYNVLIDSLAKIGRYDKALSIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LSLDK+NI PDSYTFSSLLNVICLSK FFLLPKLVDGFFVE DLVACNSLL+YL KAGFP
Sbjct: 361 LSLDKQNIYPDSYTFSSLLNVICLSKMFFLLPKLVDGFFVEADLVACNSLLNYLSKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
SLA+ELYDEMLDKGLMPDKYSVLGVL GLC SRRIDEAVH+YNGILL++T VDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCGSRRIDEAVHLYNGILLNHTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
IDGL+KAGKCHSAIRVFR+ LLE NSLDVVS++V IRGLLM R TEA +LYN+MKEVGI
Sbjct: 481 IDGLIKAGKCHSAIRVFRKTLLEENSLDVVSFTVGIRGLLMVSRHTEALNLYNHMKEVGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNGHICN+ML +FCKE+N ESV+QMLQEMIDLRIEMSCNN RLC AICRSSYNS +VI
Sbjct: 541 NPNGHICNLMLFNFCKERNLESVEQMLQEMIDLRIEMSCNNFVRLCNAICRSSYNSRLVI 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
LLI+M DLGLL KLAC ILV KP K VNV EKHH++LN CIE+GLFG TSGSE+ T+V
Sbjct: 601 YLLIEMRDLGLLPAKLACKILVHKPPKVVNVFEKHHELLNGCIEYGLFGYTSGSEEYTDV 660
BLAST of Sed0018321 vs. ExPASy TrEMBL
Match:
A0A6J1KFA9 (putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita maxima OX=3661 GN=LOC111495287 PE=4 SV=1)
HSP 1 Score: 1029.2 bits (2660), Expect = 7.3e-297
Identity = 517/665 (77.74%), Postives = 578/665 (86.92%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIWRHG N+F IAS + LR+FAHQ KCS L++ T N H QKFS NR VIL
Sbjct: 1 MIWRHGCNIFRIASRQILRTFAHQPYRKCSASLINLTKNLHNQLNEDIEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TNELV++TLL C SDL+ L+FF+ CAKQP+FFHN AF+YMVGVVSRLMERYETV G++G
Sbjct: 61 TNELVHTTLLTCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMERYETVSGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
LESVG VTKAQTFLLLLRIYWRGGMYELVFEAFDHM RCGFTPNTFARN+I+DVLFKVG
Sbjct: 121 ALESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRCGFTPNTFARNVIMDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKETLLPNFLTFNIVLCNLSKI+DL+GIRDAFRCML+MGY PN GTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYSPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRL EAYQVLG+MTT GISMS IWTIM+DG R +R +DASSLVKKMEKSGCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGLRRLNRTSDASSLVKKMEKSGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIKGYM+A LVS+AFDVLSII LEG PDRV YNVLID LAKIGRY EAL +F
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIRLEGLPPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LS+DK+NI+PD YTFSSLLN ICLSK+ FLLPKLVDGFFVE+DLVACNSLLSYL KAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFVEVDLVACNSLLSYLAKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
SLA+ELYDEMLDKGLMPDKYSVLGVL GLC+++RIDEAV++YNGILL+YT VDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
I+GL+KAGKCHSAIRVFR+ LLE +SLD VSYSVAIRGLLM GR TEAY+LYNYMKE GI
Sbjct: 481 INGLIKAGKCHSAIRVFRKKLLEKSSLDAVSYSVAIRGLLMVGRGTEAYNLYNYMKEAGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNG +CNVMLSSFCKEK+FESVKQMLQEMIDL IE+S NN FRLC AI SSYN ++V
Sbjct: 541 NPNGDMCNVMLSSFCKEKDFESVKQMLQEMIDLGIEISWNNFFRLCNAIYSSSYNFYLVS 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
+LL++M+ LGLL KLAC LV K LK+VN+SE+HHK+LN +E+ LFGDTS S++ T V
Sbjct: 601 HLLVEMKGLGLLPDKLACKTLVYKRLKAVNISEEHHKLLNGHLEYCLFGDTSSSDEYTNV 660
BLAST of Sed0018321 vs. ExPASy TrEMBL
Match:
A0A0A0M137 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537540 PE=4 SV=1)
HSP 1 Score: 998.8 bits (2581), Expect = 1.1e-287
Identity = 505/665 (75.94%), Postives = 568/665 (85.41%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIWR+G N+F IAS + +R+FAHQS +C+TP ++ T H QKFS NR VIL
Sbjct: 1 MIWRYGCNIFQIASRQIIRTFAHQSYRRCTTPHINLTKILHNRLDEDIEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TN+LVY+TLLNC SDLIAL+FF+ CAKQP+FFHN AAFDYMVGVVSRLM++YETV G++G
Sbjct: 61 TNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYWRGGMY+LVFEAFDHM R GFTPNTFARN+I+DVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVALKVFKETLLPNFLTFNIVLCNLSK KDL+GI D FRCML+MGY PN GTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRLAEAYQV G+MTTFGISMS IWTIM+DGFCR R +ASSLVKKM+KSGCSP
Sbjct: 241 GLCKLGRLAEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIKGY+ A +S+AFDVLSII+ EG SPD + YNVLIDSLAK RY +ALS+F
Sbjct: 301 NIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LSL KRNI+PD YTFSSLLN ICLSK+ FLLPKLVDGF VE+DLVACNSLLSYLGKAGF
Sbjct: 361 LSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFA 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
+LA+ELY+ M++ GLMPDKYSVLGVL GLCESRRI EAV +YNGILL+YT VDAHIHTVI
Sbjct: 421 ALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
IDGL+KAGK HSAIR+FRRNLLE NSLDVVSYSVAIRGLL+ GR+TEA +LYNYMKE GI
Sbjct: 481 IDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNGH+CNVMLS+FCKEK F VKQMLQEMIDL I+MS NN FRL AICRSS SH+VI
Sbjct: 541 NPNGHVCNVMLSTFCKEKKFALVKQMLQEMIDLGIKMSRNNFFRLYNAICRSSNGSHLVI 600
Query: 601 NLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILNVCIEHGLFGDTSGSEDCTEV 658
LLI+M+ LGLL K C LV P K VN+SEKH+K+LN C+E+ L GDTS SE+ T+V
Sbjct: 601 YLLIEMKVLGLLPRKRDCETLVHNPPKDVNISEKHYKLLNGCLEYCLCGDTSSSEEYTDV 660
BLAST of Sed0018321 vs. ExPASy TrEMBL
Match:
A0A6J1EGE1 (putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita moschata OX=3662 GN=LOC111434100 PE=4 SV=1)
HSP 1 Score: 975.3 bits (2520), Expect = 1.2e-280
Identity = 489/618 (79.13%), Postives = 540/618 (87.38%), Query Frame = 0
Query: 1 MIWRHGRNLFNIASFRTLRSFAHQSIHKCSTPLVSSTLNTH--------QKFSNNRPVIL 60
MIW HG N+F IA + LR+FAHQ KC PL++ T N H QKFS NR VIL
Sbjct: 1 MIWGHGCNIFRIAPRQILRTFAHQPHRKCLAPLINLTKNLHNQLNQDIEQKFSENRQVIL 60
Query: 61 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 120
TNELV++TLLNC SDL+ L+FF+ CAKQP+FFHN AF+YMVGVVSRLMERYETV G++G
Sbjct: 61 TNELVHTTLLNCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMERYETVSGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVG 180
LESVG VTKAQTFLLLLRIYWRGGMYELVFEAFDHM RCGFTPNTFARN+I+DVLFKVG
Sbjct: 121 ALESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRCGFTPNTFARNVIMDVLFKVG 180
Query: 181 HSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLN 240
+DVAL+VFKETLLPNFLTFNIVLCNLSKI+DL+GIRDAFRCML+MGYYPN GTFEVVLN
Sbjct: 181 RADVALEVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYYPNPGTFEVVLN 240
Query: 241 CLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSP 300
LCK GRL EAYQVLG+MTT GISMS IWTIM+DGF R HR ADASSLVKKME SGCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGFRRLHRTADASSLVKKMEISGCSP 300
Query: 301 NIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLF 360
NIVTYTTLIKGYM+A LVS+AFDVLSII+LEG SPDRV YNVLID LAKIGRY EAL +F
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIELEGLSPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGKAGFP 420
LS+DK+NI+PD YTFSSLLN ICLSK+ FLLPKLVDGFFVE+DLVACNSLLSYLGKAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFVEVDLVACNSLLSYLGKAGFP 420
Query: 421 SLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVI 480
SLA+ELYDEMLDKGLMPDKYSVLGVL GLC+++RIDEAV++YNGILL+YT VDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 IDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGI 540
I+GL+KAGKCHSAIRVFR+ LLE +SLD VSYSVAIRGLLM GR TEA LYNYMKE GI
Sbjct: 481 INGLIKAGKCHSAIRVFRKKLLEKSSLDAVSYSVAIRGLLMVGRGTEACKLYNYMKEAGI 540
Query: 541 NPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSYNSHMVI 600
NPNG +CNVMLSSFCKEK+FESVKQMLQEMIDL IE+S NN FRLC AI SSYN + V
Sbjct: 541 NPNGDMCNVMLSSFCKEKDFESVKQMLQEMIDLGIEISWNNFFRLCNAIYSSSYNFYPVS 600
Query: 601 NLLIQMEDLGLLQGKLAC 611
+LL++M+ LGLL KL C
Sbjct: 601 HLLVEMKGLGLLPDKLGC 618
BLAST of Sed0018321 vs. ExPASy TrEMBL
Match:
A0A6J1CES3 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010829 PE=4 SV=1)
HSP 1 Score: 929.5 bits (2401), Expect = 7.9e-267
Identity = 464/565 (82.12%), Postives = 505/565 (89.38%), Query Frame = 0
Query: 93 MVGVVSRLMERYETVKGVIGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRC 152
MVGVVSRLM+RYETV GV+GGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFD MG C
Sbjct: 1 MVGVVSRLMKRYETVNGVVGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDQMGHC 60
Query: 153 GFTPNTFARNMIIDVLFKVGHSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAF 212
GFTPNTFARN+I+DVLFKVG +DVALKVFKET LPNFLTFNIVLCNLSKIKD VGI DA
Sbjct: 61 GFTPNTFARNVIVDVLFKVGRADVALKVFKETPLPNFLTFNIVLCNLSKIKDFVGIGDAV 120
Query: 213 RCMLKMGYYPNSGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRF 272
R ML+MGYYPN GTFE VLNC CK GRLAEAYQVLG+MTT GISMS IWTI+VDGFCR
Sbjct: 121 RRMLRMGYYPNPGTFEGVLNCFCKLGRLAEAYQVLGIMTTLGISMSVNIWTIIVDGFCRL 180
Query: 273 HRIADASSLVKKMEKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFY 332
HR ADASSLVKKM+++GC PNIVTYTTLIK Y+ A L S+A VLSII+ EG+SPDRV Y
Sbjct: 181 HRTADASSLVKKMKRTGCFPNIVTYTTLIKAYLEAQLFSDASSVLSIIESEGHSPDRVLY 240
Query: 333 NVLIDSLAKIGRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFV 392
NVLIDSLAKIGRY +ALS+FLSLDK+NI PDSYTFSSLLNVICLSK FFLLPKLVDGFFV
Sbjct: 241 NVLIDSLAKIGRYDKALSIFLSLDKQNIYPDSYTFSSLLNVICLSKMFFLLPKLVDGFFV 300
Query: 393 ELDLVACNSLLSYLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVH 452
E DLVACNSLL+YL KAGFPSLA+ELYDEMLDKGLMPDKYSVLGVL GLC SRRIDEAVH
Sbjct: 301 EADLVACNSLLNYLSKAGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCGSRRIDEAVH 360
Query: 453 IYNGILLSYTRVDAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLL 512
+YNGILL++T VDAHIHTVIIDGL+KAGKCHSAIRVFR+ LLE NSLDVVS++V IRGLL
Sbjct: 361 LYNGILLNHTGVDAHIHTVIIDGLIKAGKCHSAIRVFRKTLLEENSLDVVSFTVGIRGLL 420
Query: 513 MGGRDTEAYDLYNYMKEVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCN 572
M R TEA +LYN+MKEVGINPNGHICN+ML +FCKE+N ESV+QMLQEMIDLRIEMSCN
Sbjct: 421 MVSRHTEALNLYNHMKEVGINPNGHICNLMLFNFCKERNLESVEQMLQEMIDLRIEMSCN 480
Query: 573 NLFRLCKAICRSSYNSHMVINLLIQMEDLGLLQGKLACSILVQKPLKSVNVSEKHHKILN 632
N RLC AICRSSYNS +VI LLI+M DLGLL KLAC ILV KP K VNV EKHH++LN
Sbjct: 481 NFVRLCNAICRSSYNSRLVIYLLIEMRDLGLLPAKLACKILVHKPPKVVNVFEKHHELLN 540
Query: 633 VCIEHGLFGDTSGSEDCTEVAASVG 658
CIE+GLFG TSGSE+ T+V+ASVG
Sbjct: 541 GCIEYGLFGYTSGSEEYTDVSASVG 565
BLAST of Sed0018321 vs. TAIR 10
Match:
AT1G16830.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 406.4 bits (1043), Expect = 4.5e-113
Identity = 219/535 (40.93%), Postives = 322/535 (60.19%), Query Frame = 0
Query: 52 LTNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVI 111
LT++ VYS L P+DL L FF CAKQ ++FH+ AFD+MVGVV +L Y ++ +I
Sbjct: 37 LTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRII 96
Query: 112 GGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKV 171
L+ G K + FLLLL I+WRG +Y+ E + M GF PNT A NM++DV FK+
Sbjct: 97 ERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKL 156
Query: 172 GHSDVALKVFKETLLPNFLTFNIVL---CNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFE 231
+ AL++F+ NF +F+I L C+ DLVG++ + M+ G+YPN F
Sbjct: 157 NVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 232 VVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKS 291
+L C+ G ++EA+QV+GLM GIS+S +W+++V GF R A L KM +
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI 276
Query: 292 GCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREA 351
GCSPN+VTYT+LIKG+++ +V AF VLS + EG +PD V N++I + ++GR+ EA
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 352 LSLFLSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDLVACNSLLSYLGK 411
+F SL+KR +VPD YTF+S+L+ +CLS +F L+P++ G + DLV N L + K
Sbjct: 337 RKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK 396
Query: 412 AGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHI 471
G+ S A+++ M K D Y+ L LC A+ +Y I+ +DAH
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 472 HTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMK 531
H+ IID L++ GK ++A+ +F+R +LE LDVVSY+VAI+GL+ R EAY L MK
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMK 516
Query: 532 EVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICR 584
E GI PN ++S CKEK E V+++L+E I +E+ N F++ + R
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
BLAST of Sed0018321 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 189.1 bits (479), Expect = 1.1e-47
Identity = 137/545 (25.14%), Postives = 257/545 (47.16%), Query Frame = 0
Query: 53 TNELVYSTLLNCPSDLIALTFFLRCAKQPDFFHNAAAFDYMVGVVSRLMERYETVKGVIG 112
T+ + +L + P D AL F +K+P+F A ++ ++ + R ++ +K ++
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGR-SGSFDDMKKILE 108
Query: 113 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHM-GRCGFTPNTFARNMIIDV---- 172
++S TFL+L+ Y + + + + D M G P+T N ++++
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168
Query: 173 ----LFKVGHSDVALKVFKETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPN 232
L ++ H+ +++ K P+ TFN+++ L + L M G P+
Sbjct: 169 NSLKLVEISHAKMSVWGIK----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 228
Query: 233 SGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVK 292
TF V+ + G L A ++ M FG S S ++V GFC+ R+ DA + ++
Sbjct: 229 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 288
Query: 293 KM-EKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKI 352
+M + G P+ T+ TL+ G A V +A +++ ++ EGY PD YN +I L K+
Sbjct: 289 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348
Query: 353 GRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQF---FLLPKLVDGFFVELDLVAC 412
G +EA+ + + R+ P++ T+++L++ +C Q L +++ + D+
Sbjct: 349 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 408
Query: 413 NSLLSYLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILL 472
NSL+ L +AMEL++EM KG PD+++ ++ LC ++DEA+++ + L
Sbjct: 409 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 468
Query: 473 SYTRVDAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTE 532
S + +IDG KA K A +F + G S + V+Y+ I GL R +
Sbjct: 469 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 528
Query: 533 AYDLYNYMKEVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCK 585
A L + M G P+ + N +L+ FC+ + + ++Q M E L
Sbjct: 529 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 588
BLAST of Sed0018321 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 179.5 bits (454), Expect = 8.8e-45
Identity = 119/473 (25.16%), Postives = 229/473 (48.41%), Query Frame = 0
Query: 102 ERYETVKGVIGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFAR 161
++YE V + +ES G T +++ + R F + + G+ P+T
Sbjct: 102 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 161
Query: 162 NMIIDVLFKVGHSDVALKVFKETL----LPNFLTFNIV---LCNLSKIKDLVGIRDAFRC 221
N +++ L AL++ + P +T N + LC K+ D V + D
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR--- 221
Query: 222 MLKMGYYPNSGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIWTIMVDGFCRFHR 281
M++ G+ PN T+ VLN +CK G+ A A ++L M I + ++I++DG C+
Sbjct: 222 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 281
Query: 282 IADASSLVKKMEKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNV 341
+ +A +L +ME G +I+TY TLI G+ NA + +L + SP+ V ++V
Sbjct: 282 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 341
Query: 342 LIDSLAKIGRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQFFLLPKLVDGFF--- 401
LIDS K G+ REA L + +R I P++ T++SL++ C + ++VD
Sbjct: 342 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 401
Query: 402 VELDLVACNSLLSYLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAV 461
+ D++ N L++ KA +EL+ EM +G++ + + ++ G C+S +++ A
Sbjct: 402 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 461
Query: 462 HIYNGILLSYTRVDAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGL 521
++ ++ R D + +++DGL G+ A+ +F + LD+ Y + I G+
Sbjct: 462 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 521
Query: 522 LMGGRDTEAYDLYNYMKEVGINPNGHICNVMLSSFCKEKNFESVKQMLQEMID 565
+ +A+DL+ + G+ + N+M+S C++ + + ++M +
Sbjct: 522 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
BLAST of Sed0018321 vs. TAIR 10
Match:
AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 179.1 bits (453), Expect = 1.2e-44
Identity = 128/471 (27.18%), Postives = 216/471 (45.86%), Query Frame = 0
Query: 128 LLLRIYWRGGMYELVFEAFDHMGRCGFTPNTFARNMIIDVLFKVGHSDVAL-----KVFK 187
+L+R+Y R GM + E F MG GF P+ + N I+ + K G DV++ ++ K
Sbjct: 168 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSFLKEMLK 227
Query: 188 ETLLPNFLTFNIVLCNLSKIKDLVGIRDAFRCMLKMGYYPNSGTFEVVLNCLCKWGRLAE 247
+ P+ TFNI++ L + M K GY P T+ VL+ CK GR
Sbjct: 228 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 287
Query: 248 AYQVLGLMTTFGISMSTTIWTIMVDGFCRFHRIADASSLVKKMEKSGCSPNIVTYTTLIK 307
A ++L M + G+ + +++ CR +RIA L++ M K PN VTY TLI
Sbjct: 288 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 347
Query: 308 GYMNAHLVSNAFDVLSIIDLEGYSPDRVFYNVLIDSLAKIGRYREALSLFLSLDKRNIVP 367
G+ N V A +L+ + G SP+ V +N LID G ++EAL +F ++ + + P
Sbjct: 348 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 407
Query: 368 DSYTFSSLLNVICLSKQFFLLPKLVDGFFVELDL-VACNSLLSYLG------KAGFPSLA 427
++ LL+ +C + +F L GF++ + C ++Y G K GF A
Sbjct: 408 SEVSYGVLLDGLCKNAEF----DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 467
Query: 428 MELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRVDAHIHTVIIDG 487
+ L +EM G+ PD + ++ G C+ R A I I + I++ +I
Sbjct: 468 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 527
Query: 488 LVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLYNYMKEVGINPN 547
+ G AIR++ +LEG++ D +++V + L G+ EA + M GI PN
Sbjct: 528 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 587
Query: 548 GHICNVMLSSFCKEKNFESVKQMLQEMIDLRIEMSCNNLFRLCKAICRSSY 587
+ +++ + + EM + + L K +C+ +
Sbjct: 588 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
BLAST of Sed0018321 vs. TAIR 10
Match:
AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 177.6 bits (449), Expect = 3.4e-44
Identity = 139/518 (26.83%), Postives = 242/518 (46.72%), Query Frame = 0
Query: 90 FDYMVGVVSRLMERYETVKGVIGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDHM 149
F + VV+R ++Y+ V + +E G T +++ R L F A +
Sbjct: 75 FSRLFSVVAR-TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 134
Query: 150 GRCGFTPNTFARNMIIDVLFKVGHSDVALKVFKETL----LPNFLTFNIV---LCNLSKI 209
+ G+ P+T + +I+ L G AL++ + P +T N + LC K+
Sbjct: 135 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 194
Query: 210 KDLVGIRDAFRCMLKMGYYPNSGTFEVVLNCLCKWGRLAEAYQVLGLMTTFGISMSTTIW 269
D V + D M++ G+ PN T+ VL +CK G+ A A ++L M I + +
Sbjct: 195 SDAVLLIDR---MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 254
Query: 270 TIMVDGFCRFHRIADASSLVKKMEKSGCSPNIVTYTTLIKGYMNAHLVSNAFDVLSIIDL 329
+I++DG C+ + +A +L +ME G +I+ YTTLI+G+ A + +L +
Sbjct: 255 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 314
Query: 330 EGYSPDRVFYNVLIDSLAKIGRYREALSLFLSLDKRNIVPDSYTFSSLLNVICLSKQF-- 389
+PD V ++ LID K G+ REA L + +R I PD+ T++SL++ C Q
Sbjct: 315 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 374
Query: 390 ------FLLPK-----------LVDGFF-------------------VELDLVACNSLLS 449
++ K L++G+ V D V N+L+
Sbjct: 375 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 434
Query: 450 YLGKAGFPSLAMELYDEMLDKGLMPDKYSVLGVLIGLCESRRIDEAVHIYNGILLSYTRV 509
+ G +A EL+ EM+ + + PD S +L GLC++ ++A+ I+ I S +
Sbjct: 435 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 494
Query: 510 DAHIHTVIIDGLVKAGKCHSAIRVFRRNLLEGNSLDVVSYSVAIRGLLMGGRDTEAYDLY 563
D I+ +II G+ A K A +F L+G DV +Y++ I GL G +EA L+
Sbjct: 495 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 554
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140090.1 | 9.1e-302 | 79.25 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momor... | [more] |
XP_023001025.1 | 1.5e-296 | 77.74 | putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima... | [more] |
XP_023519013.1 | 2.2e-292 | 77.83 | putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo s... | [more] |
XP_038894703.1 | 9.8e-288 | 76.24 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g16... | [more] |
XP_011659004.1 | 2.2e-287 | 75.94 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Cucum... | [more] |
Match Name | E-value | Identity | Description | |
Q3EDA9 | 6.3e-112 | 40.93 | Putative pentatricopeptide repeat-containing protein At1g16830 OS=Arabidopsis th... | [more] |
Q9LFF1 | 1.6e-46 | 25.14 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9LPX2 | 1.2e-43 | 25.16 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Q9LVQ5 | 1.6e-43 | 27.18 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... | [more] |
Q9ASZ8 | 4.7e-43 | 26.83 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CES7 | 4.4e-302 | 79.25 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 OS=Mom... | [more] |
A0A6J1KFA9 | 7.3e-297 | 77.74 | putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita maxi... | [more] |
A0A0A0M137 | 1.1e-287 | 75.94 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537540 PE=4 SV=1 | [more] |
A0A6J1EGE1 | 1.2e-280 | 79.13 | putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita mosc... | [more] |
A0A6J1CES3 | 7.9e-267 | 82.12 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X2 OS=Mom... | [more] |
Match Name | E-value | Identity | Description | |
AT1G16830.1 | 4.5e-113 | 40.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.1e-47 | 25.14 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12775.1 | 8.8e-45 | 25.16 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G55840.1 | 1.2e-44 | 27.18 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G12620.1 | 3.4e-44 | 26.83 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |