Sed0018305 (gene) Chayote v1

Overview


Name	Sed0018305
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-like cyclin
Location	LG13: 2798669 .. 2801551 (-)
RNA-Seq Expression	Sed0018305
Synteny	Sed0018305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAATTTTATCATTGATAGAAATCAATATGACATAGATAAAATTATTTTAGACATTATGCTACAAATGTAATTCAAAAGTTAAAATGTGCTCCAATAAATTCTCTAGAAAATAAGAGAGAGAAAGGCACACTGAGTGCATTTGACTTGGTTTCAACTAAACCCATAAACGCTTCGCCATCACTCTCAACAATCCCACCGCCCCTCTTCATCGCCGTTCACCTTCCTCCTCCTCTCCAATGCCGCCACCACCACCGGCGTTACTTTTCCGGTGACCTCTCTTCTCTTCAATGTCTCTCTCTCCCGACCATTCCGCCGCTTCCTCCTCCACCCCCGGCGCCGAACGCCACATCTCCACGGCGGACTCCTCGATCTCCGATGACTCCGCCATTTTCACCCTTCTTCAATCGGAGCTCCACCACATGCCTCGCCGTGGCCGCCCGATCGACATCGCCGCTCGCCGAGACTCCATCAACTGGATCCTGAAGGTATATACTGCTATCGATTACTCCAATTTTGCATCGCCGTTTCTCAAAAGTAATTAGGGTTTTGCAGGTTCACAATCACTACAATTTCAAACCGATCACTGCGATTCTTTCTGTTAATTACTTCGATCGCTTTCTCTCTTCCAATTTCCTTCCGGTTAGGGTTTGTTTTTCGTTTTCCCTCTTGTAATTGTCTGAATCGTCGGAGAAATTGATCGGAAATTTGACGCTCATGATTTAGGGCTTTTTGTTTAATCTTCTTGCAGCGGCCAAATGGATGGCCGATTCAGCTTCTATCGGTGGCGTGTTTATCATTAGCGGCGAAAATGGAGGAATCTCAGGTTCCATTGCTTTTGGATCTTCAAATCTTCGATCCTAAATACGTTTTCGAGTCCAAAACGGTCCAGAGAATGGAGCTTTGCGTTATGTCTATTCTCGACTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCGCTTCATCTCCGATCTTTGTTCTTCTTCCGCCGCACACGGCGGCGATAGCGACGGCGGACTCTTCTCGTCTTCTTCCGATCTCATTCTCGGCACCACTCGCGGTACTTACGATCAAAATCTCCTGACTCTGCTTTTGTTTAATTCGATTCATCTATTTCGTTGTTTTTTAAAAAAGAAATTTGGAATTTTGTTTCAGTGATTGATTTCTTGGTGTTTCCGCCGTCCGCCATTGCCGCCGCCGCCGTTCTCTGTGCCGCTGGTGAGCGGTTTGATTCTCCGGCGCTTTGTAGCCATTTGCTTGCGGCGGATAGAGTCGTAAGTATTGATTCAATACTATATGTGGGGTTAATATATATCAAGTACCAACAATACCATTTTTTTTTTATATATAAAGTTAATAGATATTCGAATTTATTTCTAGAAAAAAATAAATAAAATCGAATTTAATTCCTATCACCATTCAATTGAAATTGAACATTAAAAGTAGAAGAAATATCAGTGTTGGAAAATGGAGCTTGTTGTCTTGGTTGATTGAATATAATTAAATTCATATAAAATTCTCTCATTTTATTTAAGAGCACAAAAATATATTCGGGATATGTTTTGTATTTTCCTCTCCGATTTAAACAAAAGAAAAAAATACCCACCCTATTTTGTTGAAAAGTAATAATAATTCTTAGCCGTATTTTAAAAAAATTTATATACTTTTAATCTAACTTTTATAGTTTTAACAATAGATGGAGAGTTTGGACTCATGACTGTTAATTTTGTGAATTCTCTCTTTATTCTCTTCTTTGACCAACATCCATTCATTCTTAAAAAAAACAAAAAAACAAACAAATCTAAGTATCAATGGAGTCCAAATACAATGAGACTATGGAGTATAGGATTCAAAAATTTGAATTACAACAAATATGGAGTATGAGCTTCAAATTAAGCATTGAAAGTAAAAGAAATATCAGTTTCCTACTTTTAACAAAGATTAATATTTTGTTTGATAATTATTTAGTTTTTAAATTTAAATTTATTTTTATTTATATTTTTTATAATTGATTCTATTTTTCCTACCACATGTTCAATCTTTATGAAAATATTAATTAAATTTCAAAAACTAAAAAATGTTTAAAATTTACTTTTTTGGTTTTAAATTTGTGTTTGGTTTTAAGAAATAGATATTCAAATAAGAAAAAATAAATAGTTAAGTAGTTGTTTAGATTAAAATTTCAAAAATAAAAAAAGTATGAAACGTAGTCATCTAAAAGAAGCTAAACAATGTGATGAATGGATACATGGACTCATTCCCCATTAAAAACAAATTATGTATTTTTTTACAATCTCAGCGTGACAACATTGATTTGGAAAATCCCTTGATGCAATTAAACCTAAATTTATCTTGATGAAGCTCGTCGAGAATTAGAATTGAGGGGTCCAAGTTCGAAATTTAACTTTTCTTTTTGGTCCGGAATTTAAAAGGCAAATACCCACATCAATTGTACTTTAATTAATAAATTTAAAAAAAAAAAAAAAAAAAAAAGTTTGGTGTTGTGGTAAAAACATTTTGTTGTCAAATTAACTTTTCTTTATTTGGGATAGGAAATGGTGAGAAGCTGTCACCAACTCATGGAGGAGCACATGACTGGCACGTGTCCGGCAAGCTTCCGAAAACAGCGGAGAGAAAGAGCCGATCAAGCGGCGCCGCCGAGTCCAGTCGGCGTGCTCGACGCGGCTGCAGGCGGTAGCTGCGACACGCGCCTGGACAATCCCGACTCCACCAGCCACCAAGCCGCCGTCGAGCCACCGGCTTTTCGGCTACGATCCTCTGCGCCGGATGTACAGAAGCAGTAGATAAGACCTACTTCGTGTCATTTTGTTAGAGGGAGAGAGAGTGAGACAAAGAAACTCTTTTTTTTTTTTTTT

mRNA sequence

GTTGAATTTTATCATTGATAGAAATCAATATGACATAGATAAAATTATTTTAGACATTATGCTACAAATGTAATTCAAAAGTTAAAATGTGCTCCAATAAATTCTCTAGAAAATAAGAGAGAGAAAGGCACACTGAGTGCATTTGACTTGGTTTCAACTAAACCCATAAACGCTTCGCCATCACTCTCAACAATCCCACCGCCCCTCTTCATCGCCGTTCACCTTCCTCCTCCTCTCCAATGCCGCCACCACCACCGGCGTTACTTTTCCGGTGACCTCTCTTCTCTTCAATGTCTCTCTCTCCCGACCATTCCGCCGCTTCCTCCTCCACCCCCGGCGCCGAACGCCACATCTCCACGGCGGACTCCTCGATCTCCGATGACTCCGCCATTTTCACCCTTCTTCAATCGGAGCTCCACCACATGCCTCGCCGTGGCCGCCCGATCGACATCGCCGCTCGCCGAGACTCCATCAACTGGATCCTGAAGGTTCACAATCACTACAATTTCAAACCGATCACTGCGATTCTTTCTGTTAATTACTTCGATCGCTTTCTCTCTTCCAATTTCCTTCCGCGGCCAAATGGATGGCCGATTCAGCTTCTATCGGTGGCGTGTTTATCATTAGCGGCGAAAATGGAGGAATCTCAGGTTCCATTGCTTTTGGATCTTCAAATCTTCGATCCTAAATACGTTTTCGAGTCCAAAACGGTCCAGAGAATGGAGCTTTGCGTTATGTCTATTCTCGACTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCGCTTCATCTCCGATCTTTGTTCTTCTTCCGCCGCACACGGCGGCGATAGCGACGGCGGACTCTTCTCGTCTTCTTCCGATCTCATTCTCGGCACCACTCGCGTGATTGATTTCTTGGTGTTTCCGCCGTCCGCCATTGCCGCCGCCGCCGTTCTCTGTGCCGCTGGTGAGCGGTTTGATTCTCCGGCGCTTTGTAGCCATTTGCTTGCGGCGGATAGAGTCGAAATGGTGAGAAGCTGTCACCAACTCATGGAGGAGCACATGACTGGCACGTGTCCGGCAAGCTTCCGAAAACAGCGGAGAGAAAGAGCCGATCAAGCGGCGCCGCCGAGTCCAGTCGGCGTGCTCGACGCGGCTGCAGGCGGTAGCTGCGACACGCGCCTGGACAATCCCGACTCCACCAGCCACCAAGCCGCCGTCGAGCCACCGGCTTTTCGGCTACGATCCTCTGCGCCGGATGTACAGAAGCAGTAGATAAGACCTACTTCGTGTCATTTTGTTAGAGGGAGAGAGAGTGAGACAAAGAAACTCTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTCTCTCTCTCCCGACCATTCCGCCGCTTCCTCCTCCACCCCCGGCGCCGAACGCCACATCTCCACGGCGGACTCCTCGATCTCCGATGACTCCGCCATTTTCACCCTTCTTCAATCGGAGCTCCACCACATGCCTCGCCGTGGCCGCCCGATCGACATCGCCGCTCGCCGAGACTCCATCAACTGGATCCTGAAGGTTCACAATCACTACAATTTCAAACCGATCACTGCGATTCTTTCTGTTAATTACTTCGATCGCTTTCTCTCTTCCAATTTCCTTCCGCGGCCAAATGGATGGCCGATTCAGCTTCTATCGGTGGCGTGTTTATCATTAGCGGCGAAAATGGAGGAATCTCAGGTTCCATTGCTTTTGGATCTTCAAATCTTCGATCCTAAATACGTTTTCGAGTCCAAAACGGTCCAGAGAATGGAGCTTTGCGTTATGTCTATTCTCGACTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCGCTTCATCTCCGATCTTTGTTCTTCTTCCGCCGCACACGGCGGCGATAGCGACGGCGGACTCTTCTCGTCTTCTTCCGATCTCATTCTCGGCACCACTCGCGTGATTGATTTCTTGGTGTTTCCGCCGTCCGCCATTGCCGCCGCCGCCGTTCTCTGTGCCGCTGGTGAGCGGTTTGATTCTCCGGCGCTTTGTAGCCATTTGCTTGCGGCGGATAGAGTCGAAATGGTGAGAAGCTGTCACCAACTCATGGAGGAGCACATGACTGGCACGTGTCCGGCAAGCTTCCGAAAACAGCGGAGAGAAAGAGCCGATCAAGCGGCGCCGCCGAGTCCAGTCGGCGTGCTCGACGCGGCTGCAGGCGGTAGCTGCGACACGCGCCTGGACAATCCCGACTCCACCAGCCACCAAGCCGCCGTCGAGCCACCGGCTTTTCGGCTACGATCCTCTGCGCCGGATGTACAGAAGCAGTAG

Protein sequence

MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPRRGRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDSPALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAGGSCDTRLDNPDSTSHQAAVEPPAFRLRSSAPDVQKQ

Homology

[Close]

BLAST of Sed0018305 vs. NCBI nr
Match: XP_038903710.1 (cyclin-D2-2-like [Benincasa hispida])

HSP 1 Score: 482.6 bits (1241), Expect = 2.6e-132
Identity = 262/341 (76.83%), Postives = 280/341 (82.11%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHI-------STADSSISDDSAIFTLLQSELHHMPR------ 60
           MSLSP HSAASSS+ GA  HI       + AD  ISDDSAIF+LLQSEL HMPR      
Sbjct: 1   MSLSPHHSAASSSSSGAGHHIPADFLCSAAADFPISDDSAIFSLLQSELDHMPRRDYVRR 60

Query: 61  -RGRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLS 120
            R + ID+ AR+DSINWILKVH HYNFKP+TAILSVNYFDRFLSSNFLPR NGW  QLLS
Sbjct: 61  CRDQSIDVTARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWAFQLLS 120

Query: 121 VACLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLH 180
           VACLS+AAKMEE +VPLLLDLQIF+PKYVFE +TVQRMEL VMSIL+WRLRAVTPFDFLH
Sbjct: 121 VACLSIAAKMEEPEVPLLLDLQIFEPKYVFEPRTVQRMELWVMSILNWRLRAVTPFDFLH 180

Query: 181 RFISDLCSSSAAHGGDSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAG 240
            FISDL SSSAA GG  DG     LFS+SSDLIL TTRVIDFL FPPS IAAAAVLCAAG
Sbjct: 181 HFISDLPSSSAADGGHGDGDDSHRLFSTSSDLILSTTRVIDFLGFPPSTIAAAAVLCAAG 240

Query: 241 ERFDSPALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVL 300
           E  DSPA CSHLLAA+RVEMVRSCHQLMEE++  TCPA  RKQR   ADQ APPSPVGVL
Sbjct: 241 ELLDSPAGCSHLLAANRVEMVRSCHQLMEEYVIDTCPAELRKQRNGGADQPAPPSPVGVL 300

Query: 301 DAAAGGSCDTRLDNPDSTSHQAAVEPPAFRLRSSAPDVQKQ 324
           DAAA GSCDTRLDNP STSH+A VEPP  RLRSSAPDVQ+Q
Sbjct: 301 DAAACGSCDTRLDNPGSTSHEAPVEPPTKRLRSSAPDVQEQ 341

[Close]

BLAST of Sed0018305 vs. NCBI nr
Match: XP_022991967.1 (cyclin-D2-2-like [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 5.8e-124
Identity = 254/339 (74.93%), Postives = 266/339 (78.47%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPID 60
           MSLSP HSAASS                SDDSAIF+LLQSEL HMPR       R R ID
Sbjct: 1   MSLSPRHSAASS----------------SDDSAIFSLLQSELDHMPRRDYVLRCRDRSID 60

Query: 61  IAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLA 120
           + AR DSINWILKVH HYNFKP+TA LSVNYFDRFLSSNFLPR NGWP QLLSVACLSLA
Sbjct: 61  VTARHDSINWILKVHAHYNFKPVTASLSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLA 120

Query: 121 AKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLC 180
           AKMEE QVPLLLDLQIF+P+YVFE KTVQRMEL VMSIL+WRLRAVTPFDFLH FISDL 
Sbjct: 121 AKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLP 180

Query: 181 SSSAAHGG--DSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDS 240
           SSSAA GG  DSDG     LFS SSDLIL TTRVIDFL F PSAIAAAAVLCAAGER DS
Sbjct: 181 SSSAADGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDS 240

Query: 241 PALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAG 300
           PA+C H L ADRVEMVRSCHQLMEE++  TCP   RKQR E A+Q APPSPVGVLDAAA 
Sbjct: 241 PAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAAC 300

Query: 301 GSCDTRLDNPDSTSHQAA---VEPPAFRLRSSAPDVQKQ 324
           GSCDTRLDN  STSH+ A    EP   RLRSSAPDVQ+Q
Sbjct: 301 GSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 323

[Close]

BLAST of Sed0018305 vs. NCBI nr
Match: KAG6600278.1 (Cyclin-D1-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-123
Identity = 252/339 (74.34%), Postives = 266/339 (78.47%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPID 60
           MSLSP HSAASS                SD+SAIFTLLQSEL HMPR       R R ID
Sbjct: 1   MSLSPHHSAASS----------------SDESAIFTLLQSELDHMPRRDYVLRCRDRSID 60

Query: 61  IAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLA 120
           + AR DSINWILKVH HYNFKP+TAILSVNYFDRFLSSNFLPR NGWP QLLSVACLSLA
Sbjct: 61  VTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLA 120

Query: 121 AKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLC 180
           AKMEE QVPLLLDLQIF+P+YVFE KTVQRMEL +MSIL+WRLRAVTPFDFLH +IS+L 
Sbjct: 121 AKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHYISNLP 180

Query: 181 SSSAAHGG--DSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDS 240
           SSSAA GG  DSDG     LFS SSDLIL TTRVIDFL F PSAIAAAAVLCAAGER DS
Sbjct: 181 SSSAADGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDS 240

Query: 241 PALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAG 300
           PA+C H L ADRVEMVRSCHQLMEE++  TCP   RKQR E A+Q APPSPVGVLDAAA 
Sbjct: 241 PAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAAC 300

Query: 301 GSCDTRLDNPDSTSHQAA---VEPPAFRLRSSAPDVQKQ 324
           GSCDTRLDN  STSH+ A    EP   RLRSSAPDVQ Q
Sbjct: 301 GSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQDQ 323

[Close]

BLAST of Sed0018305 vs. NCBI nr
Match: XP_023524811.1 (cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.3 bits (1157), Expect = 1.4e-122
Identity = 251/339 (74.04%), Postives = 263/339 (77.58%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPID 60
           MSLSP  SAASS                SDDS IFTLLQSEL HMPR       R R ID
Sbjct: 1   MSLSPHQSAASS----------------SDDSVIFTLLQSELDHMPRRDYVLRCRDRSID 60

Query: 61  IAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLA 120
           + AR DSINWILKVH HYNFKP+TAILSVNYFDRFLSSNFLPR NGWP QLLSVACLSLA
Sbjct: 61  VTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLA 120

Query: 121 AKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLC 180
           AKMEE QVPLLLDLQIF+P+YVFE KTVQRMEL +MSIL+WRLRAVTPFDFLH FISD  
Sbjct: 121 AKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQP 180

Query: 181 SSSAAHGG--DSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDS 240
           SSSA  GG  DSDG     LFS SSDLIL TTRVIDFL F PSAIAAAAVLCAAGER DS
Sbjct: 181 SSSATDGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDS 240

Query: 241 PALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAG 300
           PA+C H L ADRVEMVRSCHQLMEE++  TCP   RKQR E A+Q APPSPVGVLDAAA 
Sbjct: 241 PAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAAC 300

Query: 301 GSCDTRLDNPDSTSHQAA---VEPPAFRLRSSAPDVQKQ 324
           GSCDTRLDN  STSH+ A    EP   RLRSSAPDVQ+Q
Sbjct: 301 GSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 323

[Close]

BLAST of Sed0018305 vs. NCBI nr
Match: XP_022941979.1 (cyclin-D2-2-like [Cucurbita moschata])

HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-121
Identity = 248/337 (73.59%), Postives = 263/337 (78.04%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPID 60
           MS SP HSAASS                SDDSAIFTLLQSEL HMPR       R R ID
Sbjct: 1   MSHSPHHSAASS----------------SDDSAIFTLLQSELDHMPRRDYVLRCRDRSID 60

Query: 61  IAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLA 120
           + AR DSINWILKVH HYNFKP+TAILSVNYFDRFLSSNFLPR NGWP QLLSVACLSLA
Sbjct: 61  VTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLA 120

Query: 121 AKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLC 180
           AKMEE QVPLLLDLQIF+P+YVFE KTVQRMEL +MSIL+WRLRA+TPFDFLH +IS+L 
Sbjct: 121 AKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAITPFDFLHHYISNLP 180

Query: 181 SSSAAHGG--DSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDS 240
           SSSAA GG  DSDG     LFS SSDLIL TTRVIDFL F PSAIAAAAVLCAAGER DS
Sbjct: 181 SSSAADGGDCDSDGDYCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDS 240

Query: 241 PALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAG 300
           PA+C H L ADRVEMVRSCHQLMEE++  TCP   RKQR E A+Q APPSPVGVLDAAA 
Sbjct: 241 PAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAAC 300

Query: 301 GSCDTRLDNPDSTSHQAA---VEPPAFRLRSSAPDVQ 322
           GSCDT LDN  STSH+ A    EP   RLRSSAPDV+
Sbjct: 301 GSCDTHLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVR 321

[Close]

BLAST of Sed0018305 vs. ExPASy Swiss-Prot
Match: Q8LHA8 (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-47
Identity = 125/288 (43.40%), Postives = 166/288 (57.64%), Query Frame = 0


Query: 28  ISDDSAIFTLLQSELHHMPRRG-------RPIDIAARRDSINWILKVHNHYNFKPITAIL 87
           I  D  +  L++ E+ H P+RG         ++ + R+D+I+WI KVH++YNF P++  L
Sbjct: 59  IDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYL 118

Query: 88  SVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQIFDPKYVFESKT 147
           +VNY DRFLSS  LP    W  QLLSV+CLSLA KMEE+ VPL +DLQ+FD +YVFE++ 
Sbjct: 119 AVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARH 178

Query: 148 VQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFSSSSDLILGTTR 207
           ++RMEL VM  L WRL+AVTPF F+  F+          G      L S  SDL +GT +
Sbjct: 179 IKRMELIVMKTLKWRLQAVTPFSFIGYFLDKF-----NEGKPPSYTLASWCSDLTVGTLK 238

Query: 208 VIDFLVFPPSAIAAAAVLCAAGER----FDSPALCSHLLAADRVEMVRSCHQLMEEHMTG 267
              FL F PS IAAA VL    E     F+S AL    +  ++ EMV  C++LM E    
Sbjct: 239 DSRFLSFRPSEIAAAVVLAVLAENQFLVFNS-ALGESEIPVNK-EMVMRCYELMVE---- 298

Query: 268 TCPASFRKQRRERADQAAPPSPVGVLDAAAGG--SCDTRLDNPDSTSH 303
              A  +K R   A  + P SP+ VLDAA     S DT L +  S S+
Sbjct: 299 --KALVKKIRNSNASSSVPHSPITVLDAACFSFRSDDTTLGSSQSNSN 333

[Close]

BLAST of Sed0018305 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 5.5e-45
Identity = 123/298 (41.28%), Postives = 167/298 (56.04%), Query Frame = 0


Query: 21  ISTADSSISDDSAIFTLLQSELHHMPRR-----------GRPIDIAARRDSINWILKVHN 80
           ++  D ++  +  +  L+++E  HMPR               +D+  R D+I+WI KVH+
Sbjct: 56  VAGVDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHS 115

Query: 81  HYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQI 140
           +Y+F P+TA L+VNY DRFLS   LP    W  QLL+VACLSLAAKMEE+ VP  LDLQ+
Sbjct: 116 YYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQV 175

Query: 141 FDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFS 200
            + +YVFE+KT+QRMEL V+S L WR++AVTPF ++  F+ +L      +GGD   G  +
Sbjct: 176 GEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL------NGGDPPSGRSA 235

Query: 201 -SSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDSPALCSHLLAADRVEMVRSCHQ 260
             SS+LIL   R  + L F PS IAAA      GE     A  SH +  +R+   +   Q
Sbjct: 236 LLSSELILCIARGTECLGFRPSEIAAAVAAAVVGEEH---AAFSH-VNKERMSHCQEVIQ 295

Query: 261 LME-EHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAGGSCDTRLDNPDSTSHQAA 306
            ME  H   + P+      R     + P SP GVLDAA  G    R D+    SH AA
Sbjct: 296 AMELIHPKPSSPS------RVFVSSSIPRSPTGVLDAA--GCLSYRSDDSAVASHYAA 335

[Close]

BLAST of Sed0018305 vs. ExPASy Swiss-Prot
Match: P42751 (Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-44
Identity = 107/235 (45.53%), Postives = 143/235 (60.85%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISD-----DSAIFTLLQSELHHMPR-------R 60
           +S S D         G     ST D S S+       +I   ++ E H +P        +
Sbjct: 14  VSFSNDMDLFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACFIEDERHFVPGHDYLSRFQ 73

Query: 61  GRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVA 120
            R +D +AR DS+ WILKV  +YNF+P+TA L+VNY DRFL +  LP  +GWP+QLL+VA
Sbjct: 74  TRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVA 133

Query: 121 CLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRF 180
           CLSLAAKMEE  VP L D Q+   KY+FE+KT++RMEL V+S+LDWRLR+VTPFDF+  F
Sbjct: 134 CLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFF 193

Query: 181 ISDLCSSSAAHGGDSDGGLFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGE 224
              +  S     G   G   S ++++IL   +   FL + PS+IAAAA+LC A E
Sbjct: 194 AYKIDPS-----GTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANE 243

[Close]

BLAST of Sed0018305 vs. ExPASy Swiss-Prot
Match: P42752 (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-43
Identity = 114/280 (40.71%), Postives = 165/280 (58.93%), Query Frame = 0


Query: 21  ISTADSSISDDSAIFTLLQSELHHMPRR-------GRPIDIAARRDSINWILKVHNHYNF 80
           + ++ SS+S+D  I  +L  E+   P            +D++ R  +++WILKV  HY+F
Sbjct: 55  MGSSSSSLSED-RIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHF 114

Query: 81  KPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQIFDPK 140
             +   LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE+ VP ++DLQ+ DPK
Sbjct: 115 GHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPK 174

Query: 141 YVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFSSSSD 200
           +VFE+KT++RMEL V++ L+WRL+A+TPF F+  F+  +        G     L   SS 
Sbjct: 175 FVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-------SGHVSENLIYRSSR 234

Query: 201 LILGTTRVIDFLVFPPSAIAAAAVLCAA----GERFDSPALCSHLLAADRVEMVRSCHQL 260
            IL TT+ I+FL F PS IAAAA +  +     E  D     S L+   + E V+ C  L
Sbjct: 235 FILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYV-KQERVKRCLNL 294

Query: 261 M-----EEHMTGTCPASFRKQRRERADQAAPPSPVGVLDA 285
           M     EE++ GT   S  +++   A +A P SPVGVL+A
Sbjct: 295 MRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEA 322

[Close]

BLAST of Sed0018305 vs. ExPASy Swiss-Prot
Match: Q0J233 (Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 4.4e-42
Identity = 108/262 (41.22%), Postives = 146/262 (55.73%), Query Frame = 0


Query: 11  SSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPIDIAARRDSINW 70
           S+ T   +   S     +   ++I  L+  E  + PR       R R ID AAR +S++W
Sbjct: 29  STCTTEDDECCSVGGEELYSAASIAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSW 88

Query: 71  ILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPL 130
           ILKV  +  F P+TA L+VNY DRFLS   LP   GW +QLL+VACLSLAAKMEE+ VP 
Sbjct: 89  ILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPS 148

Query: 131 LLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDS 190
           LLDLQ+   +YVFE +T+ RME  +++ L+WRLR+VTPF F+  F     S++     +S
Sbjct: 149 LLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACKHISNAMVQNANS 208

Query: 191 DGGLFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGE----RFDSPALCSHLLAADR 250
           D                 I FL   PS++AAAAVLCA GE     F +P L  +      
Sbjct: 209 D-----------------IQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLA 268

Query: 251 VEMVRSCHQLMEEHMTGTCPAS 262
            E + SC+QLM++ + G    S
Sbjct: 269 EEGISSCYQLMQQLVIGNVQRS 273

[Close]

BLAST of Sed0018305 vs. ExPASy TrEMBL
Match: A0A6J1JNE1 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488456 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.8e-124
Identity = 254/339 (74.93%), Postives = 266/339 (78.47%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPID 60
           MSLSP HSAASS                SDDSAIF+LLQSEL HMPR       R R ID
Sbjct: 1   MSLSPRHSAASS----------------SDDSAIFSLLQSELDHMPRRDYVLRCRDRSID 60

Query: 61  IAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLA 120
           + AR DSINWILKVH HYNFKP+TA LSVNYFDRFLSSNFLPR NGWP QLLSVACLSLA
Sbjct: 61  VTARHDSINWILKVHAHYNFKPVTASLSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLA 120

Query: 121 AKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLC 180
           AKMEE QVPLLLDLQIF+P+YVFE KTVQRMEL VMSIL+WRLRAVTPFDFLH FISDL 
Sbjct: 121 AKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLP 180

Query: 181 SSSAAHGG--DSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDS 240
           SSSAA GG  DSDG     LFS SSDLIL TTRVIDFL F PSAIAAAAVLCAAGER DS
Sbjct: 181 SSSAADGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDS 240

Query: 241 PALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAG 300
           PA+C H L ADRVEMVRSCHQLMEE++  TCP   RKQR E A+Q APPSPVGVLDAAA 
Sbjct: 241 PAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAAC 300

Query: 301 GSCDTRLDNPDSTSHQAA---VEPPAFRLRSSAPDVQKQ 324
           GSCDTRLDN  STSH+ A    EP   RLRSSAPDVQ+Q
Sbjct: 301 GSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 323

[Close]

BLAST of Sed0018305 vs. ExPASy TrEMBL
Match: A0A6J1FQ05 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111447185 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.6e-122
Identity = 248/337 (73.59%), Postives = 263/337 (78.04%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISDDSAIFTLLQSELHHMPR-------RGRPID 60
           MS SP HSAASS                SDDSAIFTLLQSEL HMPR       R R ID
Sbjct: 1   MSHSPHHSAASS----------------SDDSAIFTLLQSELDHMPRRDYVLRCRDRSID 60

Query: 61  IAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLA 120
           + AR DSINWILKVH HYNFKP+TAILSVNYFDRFLSSNFLPR NGWP QLLSVACLSLA
Sbjct: 61  VTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLA 120

Query: 121 AKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLC 180
           AKMEE QVPLLLDLQIF+P+YVFE KTVQRMEL +MSIL+WRLRA+TPFDFLH +IS+L 
Sbjct: 121 AKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAITPFDFLHHYISNLP 180

Query: 181 SSSAAHGG--DSDGG----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGERFDS 240
           SSSAA GG  DSDG     LFS SSDLIL TTRVIDFL F PSAIAAAAVLCAAGER DS
Sbjct: 181 SSSAADGGDCDSDGDYCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDS 240

Query: 241 PALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGVLDAAAG 300
           PA+C H L ADRVEMVRSCHQLMEE++  TCP   RKQR E A+Q APPSPVGVLDAAA 
Sbjct: 241 PAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAAC 300

Query: 301 GSCDTRLDNPDSTSHQAA---VEPPAFRLRSSAPDVQ 322
           GSCDT LDN  STSH+ A    EP   RLRSSAPDV+
Sbjct: 301 GSCDTHLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVR 321

[Close]

BLAST of Sed0018305 vs. ExPASy TrEMBL
Match: E5GBG8 (B-like cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.9e-120
Identity = 246/347 (70.89%), Postives = 271/347 (78.10%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSS-----------ISDDSAIFTLLQSELHHMPR-- 60
           MSLSP H + +SS+  +    S++ SS           ISDDS I TLLQSELHHMPR  
Sbjct: 1   MSLSPHHHSPASSSSSSSSSSSSSSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPRID 60

Query: 61  -----RGRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPI 120
                R   ID+ AR+DSINWILKVH+HYNFKP+TAILSVNYFDRFLSSN LPR NGW  
Sbjct: 61  YLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120

Query: 121 QLLSVACLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPF 180
           QLLSVACLSLAAKMEE +VPLLLDLQIF+PKYVFE KTVQRMEL VMSIL+WRLRAVTPF
Sbjct: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180

Query: 181 DFLHRFISDL-CSSSAAHG--GDSDGG--LFSSSSDLILGTTRVIDFLVFPPSAIAAAAV 240
           DFLH FISDL  SSSAA    GDSD    LFSSSSDLIL TTRVIDFL FPPS IAAAAV
Sbjct: 181 DFLHHFISDLPTSSSAAESGRGDSDDSHRLFSSSSDLILSTTRVIDFLEFPPSTIAAAAV 240

Query: 241 LCAAGERFDSPALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPS 300
           LCAAGER DSP +C+H LAA+R+E V+SCHQLMEE++  TC A  RKQRR   +Q APPS
Sbjct: 241 LCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAELRKQRRIGEEQPAPPS 300

Query: 301 PVGVLDAAAGGSCDTRLDNPDSTSHQAAVEP-PAFRLRSSAPDVQKQ 324
           PVGVLDAAA GSCDTRLD+P STSH+   EP P+ R+RSSAPDVQ Q
Sbjct: 301 PVGVLDAAACGSCDTRLDHPGSTSHEPPAEPSPSKRIRSSAPDVQHQ 347

[Close]

BLAST of Sed0018305 vs. ExPASy TrEMBL
Match: A0A1S3BY27 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103494823 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.9e-120
Identity = 246/347 (70.89%), Postives = 271/347 (78.10%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSS-----------ISDDSAIFTLLQSELHHMPR-- 60
           MSLSP H + +SS+  +    S++ SS           ISDDS I TLLQSELHHMPR  
Sbjct: 1   MSLSPHHHSPASSSSSSSSSSSSSSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPRID 60

Query: 61  -----RGRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPI 120
                R   ID+ AR+DSINWILKVH+HYNFKP+TAILSVNYFDRFLSSN LPR NGW  
Sbjct: 61  YLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120

Query: 121 QLLSVACLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPF 180
           QLLSVACLSLAAKMEE +VPLLLDLQIF+PKYVFE KTVQRMEL VMSIL+WRLRAVTPF
Sbjct: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180

Query: 181 DFLHRFISDL-CSSSAAHG--GDSDGG--LFSSSSDLILGTTRVIDFLVFPPSAIAAAAV 240
           DFLH FISDL  SSSAA    GDSD    LFSSSSDLIL TTRVIDFL FPPS IAAAAV
Sbjct: 181 DFLHHFISDLPTSSSAAESGRGDSDDSHRLFSSSSDLILSTTRVIDFLEFPPSTIAAAAV 240

Query: 241 LCAAGERFDSPALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPS 300
           LCAAGER DSP +C+H LAA+R+E V+SCHQLMEE++  TC A  RKQRR   +Q APPS
Sbjct: 241 LCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAELRKQRRIGEEQPAPPS 300

Query: 301 PVGVLDAAAGGSCDTRLDNPDSTSHQAAVEP-PAFRLRSSAPDVQKQ 324
           PVGVLDAAA GSCDTRLD+P STSH+   EP P+ R+RSSAPDVQ Q
Sbjct: 301 PVGVLDAAACGSCDTRLDHPGSTSHEPPAEPSPSKRIRSSAPDVQHQ 347

[Close]

BLAST of Sed0018305 vs. ExPASy TrEMBL
Match: A0A6J1JBE4 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111482925 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 1.0e-118
Identity = 241/342 (70.47%), Postives = 267/342 (78.07%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHIS-------TADSSISDDSAIFTLLQSELHHMPR------ 60
           MSLSPD S ASSS+ G  RH+S        ADS ISDDSAIF+LLQSEL HMPR      
Sbjct: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRR 60

Query: 61  -RGRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLS 120
            R R ID+ AR+DSINWILKVH HYNFKP+TAILSVNYFDRFLS+NFLPR NGW  QLL+
Sbjct: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWLFQLLA 120

Query: 121 VACLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLH 180
           VACLSLAAKMEE  VPLLLDLQIF+PKYVF+ KTVQRMEL V+SIL+WRLRAVTPFDFLH
Sbjct: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180

Query: 181 RFISDLCSSSAAHGGDSDGG-----LFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAA 240
            FISDL  SSAA+GG+ DG      LFS+SSDLIL TTRVIDFL FPP  IAAAAVL A 
Sbjct: 181 HFISDLLPSSAAYGGEVDGDGSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAV 240

Query: 241 GERFDSPALCSHLLAADRVEMVRSCHQLMEEHMTGTCPASFRKQRRERADQAAPPSPVGV 300
           GER DSPA+C+H LAA+R+EMVRSC+QLMEE++  TCPA   KQR    +Q AP SPVGV
Sbjct: 241 GERVDSPAVCTHFLAANRIEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGV 300

Query: 301 LDAAAGGSCDTRLDNPDSTSHQAAVEPPAFRLRSSAPDVQKQ 324
           L+AAA GSCDT          +AAVEPP  RLRSSAPDVQ+Q
Sbjct: 301 LEAAACGSCDT----------EAAVEPPTKRLRSSAPDVQEQ 332

[Close]

BLAST of Sed0018305 vs. TAIR 10
Match: AT1G70210.1 (CYCLIN D1;1 )

HSP 1 Score: 181.8 bits (460), Expect = 8.8e-46
Identity = 107/235 (45.53%), Postives = 143/235 (60.85%), Query Frame = 0


Query: 1   MSLSPDHSAASSSTPGAERHISTADSSISD-----DSAIFTLLQSELHHMPR-------R 60
           +S S D         G     ST D S S+       +I   ++ E H +P        +
Sbjct: 14  VSFSNDMDLFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACFIEDERHFVPGHDYLSRFQ 73

Query: 61  GRPIDIAARRDSINWILKVHNHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVA 120
            R +D +AR DS+ WILKV  +YNF+P+TA L+VNY DRFL +  LP  +GWP+QLL+VA
Sbjct: 74  TRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVA 133

Query: 121 CLSLAAKMEESQVPLLLDLQIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRF 180
           CLSLAAKMEE  VP L D Q+   KY+FE+KT++RMEL V+S+LDWRLR+VTPFDF+  F
Sbjct: 134 CLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFF 193

Query: 181 ISDLCSSSAAHGGDSDGGLFSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGE 224
              +  S     G   G   S ++++IL   +   FL + PS+IAAAA+LC A E
Sbjct: 194 AYKIDPS-----GTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANE 243

[Close]

BLAST of Sed0018305 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 181.8 bits (460), Expect = 8.8e-46
Identity = 114/280 (40.71%), Postives = 165/280 (58.93%), Query Frame = 0


Query: 21  ISTADSSISDDSAIFTLLQSELHHMPRR-------GRPIDIAARRDSINWILKVHNHYNF 80
           + ++ SS+S+D  I  +L  E+   P            +D++ R  +++WILKV  HY+F
Sbjct: 55  MGSSSSSLSED-RIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHF 114

Query: 81  KPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQIFDPK 140
             +   LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE+ VP ++DLQ+ DPK
Sbjct: 115 GHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPK 174

Query: 141 YVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFSSSSD 200
           +VFE+KT++RMEL V++ L+WRL+A+TPF F+  F+  +        G     L   SS 
Sbjct: 175 FVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-------SGHVSENLIYRSSR 234

Query: 201 LILGTTRVIDFLVFPPSAIAAAAVLCAA----GERFDSPALCSHLLAADRVEMVRSCHQL 260
            IL TT+ I+FL F PS IAAAA +  +     E  D     S L+   + E V+ C  L
Sbjct: 235 FILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQQERVKRCLNL 294

Query: 261 M-----EEHMTGTCPASFRKQRRERADQAAPPSPVGVLDA 285
           M     EE++ GT   S  +++   A +A P SPVGVL+A
Sbjct: 295 MRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEA 323

[Close]

BLAST of Sed0018305 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-44
Identity = 114/280 (40.71%), Postives = 165/280 (58.93%), Query Frame = 0


Query: 21  ISTADSSISDDSAIFTLLQSELHHMPRR-------GRPIDIAARRDSINWILKVHNHYNF 80
           + ++ SS+S+D  I  +L  E+   P            +D++ R  +++WILKV  HY+F
Sbjct: 55  MGSSSSSLSED-RIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHF 114

Query: 81  KPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQIFDPK 140
             +   LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE+ VP ++DLQ+ DPK
Sbjct: 115 GHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPK 174

Query: 141 YVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFSSSSD 200
           +VFE+KT++RMEL V++ L+WRL+A+TPF F+  F+  +        G     L   SS 
Sbjct: 175 FVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-------SGHVSENLIYRSSR 234

Query: 201 LILGTTRVIDFLVFPPSAIAAAAVLCAA----GERFDSPALCSHLLAADRVEMVRSCHQL 260
            IL TT+ I+FL F PS IAAAA +  +     E  D     S L+   + E V+ C  L
Sbjct: 235 FILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYV-KQERVKRCLNL 294

Query: 261 M-----EEHMTGTCPASFRKQRRERADQAAPPSPVGVLDA 285
           M     EE++ GT   S  +++   A +A P SPVGVL+A
Sbjct: 295 MRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEA 322

[Close]

BLAST of Sed0018305 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 166.4 bits (420), Expect = 3.8e-41
Identity = 97/245 (39.59%), Postives = 144/245 (58.78%), Query Frame = 0


Query: 26  SSISDDSAIFTLLQSELHHMPR-------RGRPIDI-AARRDSINWILKVHNHYNFKPIT 85
           S    +  I  +++ E  H+P        R   +D+   RRD++NWI K    + F P+ 
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLC 98

Query: 86  AILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDLQIFDPKYVFE 145
             L++NY DRFLS + LP   GW +QLL+VACLSLAAK+EE++VP+L+DLQ+ DP++VFE
Sbjct: 99  FCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFE 158

Query: 146 SKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGLFSSSSDLILG 205
           +K+VQRMEL V++ L WRLRA+TP  ++  F+  +         +    L S S  +I  
Sbjct: 159 AKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQ----EPSNTLISRSLQVIAS 218

Query: 206 TTRVIDFLVFPPSAIAAAAVLCAAGE----RFDSPALCSHLLAADRVEMVRSCHQLMEEH 259
           TT+ IDFL F PS +AAA  L  +GE     FD+ +  S L +  + E V+   +++E  
Sbjct: 219 TTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF-SPLFSLLQKERVKKIGEMIESD 278

[Close]

BLAST of Sed0018305 vs. TAIR 10
Match: AT5G65420.3 (CYCLIN D4;1 )

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-39
Identity = 97/255 (38.04%), Postives = 145/255 (56.86%), Query Frame = 0


Query: 26  SSISDDSAIFTLLQSELHHMPR-------RGRPIDI-AARRDSINWILKVH--------- 85
           S    +  I  +++ E  H+P        R   +D+   RRD++NWI K+          
Sbjct: 39  SQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREA 98

Query: 86  -NHYNFKPITAILSVNYFDRFLSSNFLPRPNGWPIQLLSVACLSLAAKMEESQVPLLLDL 145
              + F P+   L++NY DRFLS + LP   GW +QLL+VACLSLAAK+EE++VP+L+DL
Sbjct: 99  CEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDL 158

Query: 146 QIFDPKYVFESKTVQRMELCVMSILDWRLRAVTPFDFLHRFISDLCSSSAAHGGDSDGGL 205
           Q+ DP++VFE+K+VQRMEL V++ L WRLRA+TP  ++  F+  +         +    L
Sbjct: 159 QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQ----EPSNTL 218

Query: 206 FSSSSDLILGTTRVIDFLVFPPSAIAAAAVLCAAGE----RFDSPALCSHLLAADRVEMV 259
            S S  +I  TT+ IDFL F PS +AAA  L  +GE     FD+ +  S L +  + E V
Sbjct: 219 ISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSF-SPLFSLLQKERV 278

The following BLAST results are available for this feature:

BLAST of Sed0018305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903710.1	2.6e-132	76.83	cyclin-D2-2-like [Benincasa hispida]	[more]
XP_022991967.1	5.8e-124	74.93	cyclin-D2-2-like [Cucurbita maxima]	[more]
KAG6600278.1	1.7e-123	74.34	Cyclin-D1-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023524811.1	1.4e-122	74.04	cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022941979.1	1.6e-121	73.59	cyclin-D2-2-like [Cucurbita moschata]	[more]

BLAST of Sed0018305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LHA8	2.0e-47	43.40	Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1	[more]
Q6YXH8	5.5e-45	41.28	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
P42751	1.2e-44	45.53	Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3	[more]
P42752	2.3e-43	40.71	Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3	[more]
Q0J233	4.4e-42	41.22	Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2	[more]

BLAST of Sed0018305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNE1	2.8e-124	74.93	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488456 PE=3 SV=1	[more]
A0A6J1FQ05	7.6e-122	73.59	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111447185 PE=3 SV=1	[more]
E5GBG8	1.9e-120	70.89	B-like cyclin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3BY27	1.9e-120	70.89	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103494823 PE=3 SV=1	[more]
A0A6J1JBE4	1.0e-118	70.47	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111482925 PE=3 SV=1	[more]

BLAST of Sed0018305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70210.1	8.8e-46	45.53	CYCLIN D1;1	[more]
AT2G22490.2	8.8e-46	40.71	Cyclin D2;1	[more]
AT2G22490.1	1.7e-44	40.71	Cyclin D2;1	[more]
AT5G65420.1	3.8e-41	39.59	CYCLIN D4;1	[more]
AT5G65420.3	2.1e-39	38.04	CYCLIN D4;1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 159..279 e-value: 1.2E-9 score: 48.1
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 159..271 e-value: 1.0E-8 score: 35.3
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 62..150 e-value: 1.6E-16 score: 70.9
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 57..149 e-value: 1.35263E-16 score: 71.886
None	No IPR available	GENE3D	1.10.472.10		coord: 37..247 e-value: 1.2E-42 score: 147.7
None	No IPR available	GENE3D	1.10.472.10		coord: 47..157 e-value: 1.2E-42 score: 147.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..323
None	No IPR available	PANTHER	PTHR10177:SF378	CYCLIN-D2-1-LIKE	coord: 18..299
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 52..156 e-value: 3.7E-25 score: 88.1
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 57..88
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 18..299
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 28..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018305.1	Sed0018305.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity