Sed0018292 (gene) Chayote v1

Overview
NameSed0018292
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSnoaL-like domain-containing protein
LocationLG03: 614549 .. 616386 (-)
RNA-Seq ExpressionSed0018292
SyntenySed0018292
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCCATCTTGTCACAGCCATCTCAAGAATGTTGTTCCATCTTCATCAACCCCACAAATTCATCTCCTCCGTTTCTAATCTCTCCATTTCCCCAATCTTTCACTCTCACTCCAACACCCAAAACATCTCCTCTTCGCCTCTCCTCTTCTCCGGTCGCCGCCGTTCCATCTCCGGCCACCAATCCCCCTCTCGACGCCGCCCCTCCATCCGCTTCCGATGTCGTCAAGGACTTCTACGACGGAATCAACCGCCGCGACCTCGCCTCCGTCGAGGACCTCATTGCCCACAGTTGCGTTTACGAGGACCTTATCTTTTCCAGCCCTTTTGTTGGCCGCAAGGTATTTTCGCCCCTCTTTCGATTCCCATGATTTTGAGTTTTTCTCACGCTTCTGCCCAGTTTTTCGTTTTGGGTTTGTGCAGGAAATTCTGGGTTTCTTCCACAAGTTTGTCGATTCCATCAGTATGGATCTTCAGTTCGTGATTGACGATATATCCACCCAAGACTCCTCTGCTGTTGGTGTTCTTTGGCATTTGGGTATTTCATTTTCTCTTCCTCTCTGTTTTTCTGTAATGTTTTTGGTATTTCAGTTTGTTTCTTGGAATTTTGATTGTAGAATGGAAAGGGAAAGAGTTTCCTTTTAGCAAGGGATGCAGTTTTTATCGCTTGGTTGTTGCTGCTGATGGAAAGAGGCAAATAATGTAACCCCAATCCAATTTTCTATCTTATTTCTTTCATGTAATATCTCTAACATGGCTTGCTAACTAACATAATTGATTTGCCTTGCCTCAATTAACAGTTATGCTCGAGACAGTGTTGAGCCTGCATTCAAGCCTGGAGAGATGGCTCTGGTATGTTCATCTTGCTTTCTTTCGTTTCTTGTTCACATATATATTGCCGGTTCTCTTATCGTGTTTGTTAGATTTTGACCGAGGGGAAGAATGATGTGTCCATTAACTTGTGTTCTTGTGTCTAGTTGTCTCAATAGGAGATGTTTGGTGGGTTTTCAGGATCCATATTATTTAAGATGTCTTTGCTCATAGAACTAAGCCTTAGCTTTGATATGAAAGATGTTTAACCTCATGAAGTTAGTTCAACAACAATTGGTGTTTAATCATGGACACATACTTCAATTCTGGTTGGGTTGGGTTGGGTTGGTCTCATGGAGTGGTTAAGGGTGTTTCTTTATGGTTTTAGATCATTGCCATCATAACGGCTACTGCTCAAAATCATGGAAAGGGAATTATCCAAAACTGTATTTCTTTTGGATACTTGAGCAGTTACCAAGATTATCTTGTTTTTGTCAACTGATTCTATTTCTTAGATGGTTTTGATTATGTATGATAAAAGTTAGGCTTCAAATTTTAGCACATAGCTAAATCATACAAGACAATGTGAGATTTTTAAATGATAGATAGATGTTGGTTAATCAAAATACGAGACTGTCCCCAAGGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTCTTCTCAAGGTCCTAAGTTCGAGACTCAGCTGTGTCATTACTCCTTCGATGTCTCTTGGTGCTTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAATAAAATAAAATAATACAAGACTCATCTAATTGAAATGAGAATCTTTTGCCAGGATTTCTATTACAATACTACAGTTCCGCACAATTGTTAGTGTTTCCCATATTGATACAGATATAGATGGTACCTGGTGAGTTTCTATGCTTTTCCTAATTAGGCTAATTTTCTCACAAATACAGACAGCCATTAGAGGTGTGACCTGGCTTCTGGAAAAATTCCCTCAGCTAGCAGATCGGATATAA

mRNA sequence

ATGAAGTCCATCTTGTCACAGCCATCTCAAGAATGTTGTTCCATCTTCATCAACCCCACAAATTCATCTCCTCCGTTTCTAATCTCTCCATTTCCCCAATCTTTCACTCTCACTCCAACACCCAAAACATCTCCTCTTCGCCTCTCCTCTTCTCCGGTCGCCGCCGTTCCATCTCCGGCCACCAATCCCCCTCTCGACGCCGCCCCTCCATCCGCTTCCGATGTCGTCAAGGACTTCTACGACGGAATCAACCGCCGCGACCTCGCCTCCGTCGAGGACCTCATTGCCCACAGTTGCGTTTACGAGGACCTTATCTTTTCCAGCCCTTTTGTTGGCCGCAAGGAAATTCTGGGTTTCTTCCACAAGTTTGTCGATTCCATCAGTATGGATCTTCAGTTCGTGATTGACGATATATCCACCCAAGACTCCTCTGCTGTTGGTGTTCTTTGGCATTTGGAATGGAAAGGGAAAGAGTTTCCTTTTAGCAAGGGATGCAGTTTTTATCGCTTGGTTGTTGCTGCTGATGGAAAGAGGCAAATAATTTATGCTCGAGACAGTGTTGAGCCTGCATTCAAGCCTGGAGAGATGGCTCTGACAGCCATTAGAGGTGTGACCTGGCTTCTGGAAAAATTCCCTCAGCTAGCAGATCGGATATAA

Coding sequence (CDS)

ATGAAGTCCATCTTGTCACAGCCATCTCAAGAATGTTGTTCCATCTTCATCAACCCCACAAATTCATCTCCTCCGTTTCTAATCTCTCCATTTCCCCAATCTTTCACTCTCACTCCAACACCCAAAACATCTCCTCTTCGCCTCTCCTCTTCTCCGGTCGCCGCCGTTCCATCTCCGGCCACCAATCCCCCTCTCGACGCCGCCCCTCCATCCGCTTCCGATGTCGTCAAGGACTTCTACGACGGAATCAACCGCCGCGACCTCGCCTCCGTCGAGGACCTCATTGCCCACAGTTGCGTTTACGAGGACCTTATCTTTTCCAGCCCTTTTGTTGGCCGCAAGGAAATTCTGGGTTTCTTCCACAAGTTTGTCGATTCCATCAGTATGGATCTTCAGTTCGTGATTGACGATATATCCACCCAAGACTCCTCTGCTGTTGGTGTTCTTTGGCATTTGGAATGGAAAGGGAAAGAGTTTCCTTTTAGCAAGGGATGCAGTTTTTATCGCTTGGTTGTTGCTGCTGATGGAAAGAGGCAAATAATTTATGCTCGAGACAGTGTTGAGCCTGCATTCAAGCCTGGAGAGATGGCTCTGACAGCCATTAGAGGTGTGACCTGGCTTCTGGAAAAATTCCCTCAGCTAGCAGATCGGATATAA

Protein sequence

MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSSPVAAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI
Homology
BLAST of Sed0018292 vs. NCBI nr
Match: XP_023518153.1 (uncharacterized protein LOC111781680 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 2.4e-73
Identity = 160/223 (71.75%), Postives = 173/223 (77.58%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSS--PPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAA 60
           M S+ S PS     +  N   S+  PP LIS   QSFTLT TP+T+   PLR SSS    
Sbjct: 22  MSSVTSPPSPFQSPLSFNHKKSAPPPPLLIS---QSFTLTRTPRTTLCFPLRASSS---- 81

Query: 61  VPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKE 120
             S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA +CVYEDLIFS PFVGRK+
Sbjct: 82  --SSSSNNPVDTL-QSASDVVRGFYDGVNRHDLASVEDLIAENCVYEDLIFSRPFVGRKD 141

Query: 121 ILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAAD 180
           IL FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV   
Sbjct: 142 ILIFFKKFNDSISKDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVGDA 201

Query: 181 GKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
            KRQIIYARDSVEPA KPGEMALT IRGVTWLLE+FPQLADRI
Sbjct: 202 KKRQIIYARDSVEPALKPGEMALTIIRGVTWLLERFPQLADRI 234

BLAST of Sed0018292 vs. NCBI nr
Match: XP_022991155.1 (uncharacterized protein LOC111487838 isoform X2 [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 2.4e-73
Identity = 158/221 (71.49%), Postives = 173/221 (78.28%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVP 60
           M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SSS      
Sbjct: 22  MGSVPSPPSPFQSPLSFNHKKSAPPPLL--ISQSFTLTRTPRTTLCFPLRVSSS------ 81

Query: 61  SPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL 120
           S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA +CVYEDLIFS PFVGRK+IL
Sbjct: 82  SSSSNNPVDTL-QSASDVVRGFYDGVNRHDLASVEDLIAENCVYEDLIFSRPFVGRKDIL 141

Query: 121 GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGK 180
            FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    K
Sbjct: 142 IFFKKFNDSISKDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVGDAKK 201

Query: 181 RQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
           RQIIYARDSVEPA KPGEMALT IRGVTWLLE+FPQLADRI
Sbjct: 202 RQIIYARDSVEPALKPGEMALTIIRGVTWLLERFPQLADRI 233

BLAST of Sed0018292 vs. NCBI nr
Match: XP_022133956.1 (uncharacterized protein LOC111006367 isoform X1 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-73
Identity = 161/222 (72.52%), Postives = 177/222 (79.73%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSS----PVAAV 60
           M S+LS PS+   +IF+NP  S+PP   S F  S   T TP +S LRL SS    P+ AV
Sbjct: 1   MNSVLSPPSKS-AAIFLNPKISAPP--CSFFTASRIPTRTPYSS-LRLCSSSSDNPLVAV 60

Query: 61  PSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEI 120
            SP TN PLDA   SASDVV+DFY GINRRDL SV  LIA +CVYEDLIFS PFVGR++I
Sbjct: 61  SSPTTNAPLDAL-RSASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFVGREDI 120

Query: 121 LGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADG 180
           L FF KF DSIS DLQFVIDDIST+DSSAVGVLWHLEWKGKEFPFSKGCSFYRLV+ ADG
Sbjct: 121 LLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVI-ADG 180

Query: 181 KRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
            RQIIY RDSVEPA KPGEMALTAI+GVTWLLE+FPQLADR+
Sbjct: 181 NRQIIYGRDSVEPAIKPGEMALTAIKGVTWLLEQFPQLADRM 216

BLAST of Sed0018292 vs. NCBI nr
Match: XP_022955016.1 (uncharacterized protein LOC111457092 isoform X2 [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 7.0e-73
Identity = 157/221 (71.04%), Postives = 172/221 (77.83%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVP 60
           M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SS       
Sbjct: 22  MSSVPSPPSPFQSPLSFNHKKSAPPPLL--ISQSFTLTRTPRTTLCFPLRVSSL------ 81

Query: 61  SPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL 120
           S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA +CVYEDLIFS PFVGRK+IL
Sbjct: 82  SSSSNNPVDTL-QSASDVVRGFYDGVNRHDLASVEDLIAENCVYEDLIFSRPFVGRKDIL 141

Query: 121 GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGK 180
            FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    K
Sbjct: 142 IFFKKFNDSISKDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVGDAKK 201

Query: 181 RQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
           RQIIYARDSVEPA KPGEMALT IRGVTWLLE+FPQLADRI
Sbjct: 202 RQIIYARDSVEPALKPGEMALTIIRGVTWLLERFPQLADRI 233

BLAST of Sed0018292 vs. NCBI nr
Match: KAG6602392.1 (hypothetical protein SDJN03_07625, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-72
Identity = 157/221 (71.04%), Postives = 172/221 (77.83%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVP 60
           M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SSS      
Sbjct: 1   MSSVPSPPSPFQSPLSFNHKKSAPPPLL--ISQSFTLTRTPRTTLCFPLRVSSS------ 60

Query: 61  SPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL 120
           S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA +CVYEDLIFS PFVGRK+IL
Sbjct: 61  SSSSNNPVDTL-QSASDVVRGFYDGVNRHDLASVEDLIAENCVYEDLIFSRPFVGRKDIL 120

Query: 121 GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGK 180
            FF K  DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    K
Sbjct: 121 IFFKKSNDSISKDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVGDAKK 180

Query: 181 RQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
           RQIIYARDSVEPA KPGEMALT IRGVTWLLE+FPQLADRI
Sbjct: 181 RQIIYARDSVEPALKPGEMALTIIRGVTWLLERFPQLADRI 212

BLAST of Sed0018292 vs. ExPASy TrEMBL
Match: A0A6J1JS34 (uncharacterized protein LOC111487838 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487838 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.2e-73
Identity = 158/221 (71.49%), Postives = 173/221 (78.28%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVP 60
           M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SSS      
Sbjct: 22  MGSVPSPPSPFQSPLSFNHKKSAPPPLL--ISQSFTLTRTPRTTLCFPLRVSSS------ 81

Query: 61  SPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL 120
           S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA +CVYEDLIFS PFVGRK+IL
Sbjct: 82  SSSSNNPVDTL-QSASDVVRGFYDGVNRHDLASVEDLIAENCVYEDLIFSRPFVGRKDIL 141

Query: 121 GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGK 180
            FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    K
Sbjct: 142 IFFKKFNDSISKDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVGDAKK 201

Query: 181 RQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
           RQIIYARDSVEPA KPGEMALT IRGVTWLLE+FPQLADRI
Sbjct: 202 RQIIYARDSVEPALKPGEMALTIIRGVTWLLERFPQLADRI 233

BLAST of Sed0018292 vs. ExPASy TrEMBL
Match: A0A6J1BWM3 (uncharacterized protein LOC111006367 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006367 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 161/222 (72.52%), Postives = 177/222 (79.73%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTSPLRLSSS----PVAAV 60
           M S+LS PS+   +IF+NP  S+PP   S F  S   T TP +S LRL SS    P+ AV
Sbjct: 1   MNSVLSPPSKS-AAIFLNPKISAPP--CSFFTASRIPTRTPYSS-LRLCSSSSDNPLVAV 60

Query: 61  PSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEI 120
            SP TN PLDA   SASDVV+DFY GINRRDL SV  LIA +CVYEDLIFS PFVGR++I
Sbjct: 61  SSPTTNAPLDAL-RSASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFVGREDI 120

Query: 121 LGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADG 180
           L FF KF DSIS DLQFVIDDIST+DSSAVGVLWHLEWKGKEFPFSKGCSFYRLV+ ADG
Sbjct: 121 LLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVI-ADG 180

Query: 181 KRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
            RQIIY RDSVEPA KPGEMALTAI+GVTWLLE+FPQLADR+
Sbjct: 181 NRQIIYGRDSVEPAIKPGEMALTAIKGVTWLLEQFPQLADRM 216

BLAST of Sed0018292 vs. ExPASy TrEMBL
Match: A0A6J1GSJ5 (uncharacterized protein LOC111457092 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457092 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.4e-73
Identity = 157/221 (71.04%), Postives = 172/221 (77.83%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKTS---PLRLSSSPVAAVP 60
           M S+ S PS     +  N   S+PP L+    QSFTLT TP+T+   PLR+SS       
Sbjct: 22  MSSVPSPPSPFQSPLSFNHKKSAPPPLL--ISQSFTLTRTPRTTLCFPLRVSSL------ 81

Query: 61  SPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEIL 120
           S ++N P+D    SASDVV+ FYDG+NR DLASVEDLIA +CVYEDLIFS PFVGRK+IL
Sbjct: 82  SSSSNNPVDTL-QSASDVVRGFYDGVNRHDLASVEDLIAENCVYEDLIFSRPFVGRKDIL 141

Query: 121 GFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGK 180
            FF KF DSIS DLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVV    K
Sbjct: 142 IFFKKFNDSISKDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVGDAKK 201

Query: 181 RQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
           RQIIYARDSVEPA KPGEMALT IRGVTWLLE+FPQLADRI
Sbjct: 202 RQIIYARDSVEPALKPGEMALTIIRGVTWLLERFPQLADRI 233

BLAST of Sed0018292 vs. ExPASy TrEMBL
Match: A0A0A0KQZ4 (SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517760 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 161/225 (71.56%), Postives = 172/225 (76.44%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKT---SPLRLSSS----PV 60
           M SILS  S     IF N   S  PF   P   SFT    PK    SPLR+SSS    P 
Sbjct: 1   MNSILSS-SSPSLPIF-NHKKSPSPF---PISHSFTSPSIPKPAPYSPLRVSSSSSDNPA 60

Query: 61  AAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGR 120
             VPSP T+ PLD    SAS+VV+DFYDG+NR DLASVE LIA +CVYEDLIFS PFVGR
Sbjct: 61  VTVPSPPTDAPLDTL-RSASNVVRDFYDGVNRHDLASVEPLIAENCVYEDLIFSRPFVGR 120

Query: 121 KEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVA 180
           K+IL FF KF DSIS DLQFVIDDIST+DSSA+GVLWHLEWKGKEFPFSKGCSFYRL   
Sbjct: 121 KDILLFFKKFNDSISKDLQFVIDDISTEDSSALGVLWHLEWKGKEFPFSKGCSFYRL-AD 180

Query: 181 ADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
            DGK+QIIYARDSVEPAFKPGEMALTAIRGVTWLLE+FPQLADRI
Sbjct: 181 VDGKKQIIYARDSVEPAFKPGEMALTAIRGVTWLLEQFPQLADRI 218

BLAST of Sed0018292 vs. ExPASy TrEMBL
Match: A0A1S3C8U3 (uncharacterized protein LOC103498136 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498136 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.4e-72
Identity = 159/225 (70.67%), Postives = 172/225 (76.44%), Query Frame = 0

Query: 1   MKSILSQPSQECCSIFINPTNSSPPFLISPFPQSFTLTPTPKT---SPLRLSSS----PV 60
           M SILS  S     IF N   S PPF   P   SFT    P+    SPLR+SSS    P 
Sbjct: 1   MNSILSS-SSPSLPIF-NHKKSPPPF---PISHSFTSPSIPRPTHYSPLRVSSSSSDNPA 60

Query: 61  AAVPSPATNPPLDAAPPSASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGR 120
             VPSP T+ PLD    SAS VV++FYDG+NR DLASVE LIA +CVYEDL+FS PFVGR
Sbjct: 61  VTVPSPPTDAPLDTL-RSASHVVREFYDGVNRHDLASVEPLIAENCVYEDLVFSRPFVGR 120

Query: 121 KEILGFFHKFVDSISMDLQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVA 180
           K+IL FF KF DSIS DLQFVIDDIST+DSSA+GVLWHLEWKGKEFPFSKGCSFYRL   
Sbjct: 121 KDILLFFKKFNDSISKDLQFVIDDISTEDSSALGVLWHLEWKGKEFPFSKGCSFYRL-AD 180

Query: 181 ADGKRQIIYARDSVEPAFKPGEMALTAIRGVTWLLEKFPQLADRI 219
            DGK+QIIYARDSVEPAFKPGEMALTAIRGVTWLLE+FPQLADRI
Sbjct: 181 VDGKKQIIYARDSVEPAFKPGEMALTAIRGVTWLLEQFPQLADRI 218

BLAST of Sed0018292 vs. TAIR 10
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.2e-61
Identity = 127/200 (63.50%), Postives = 144/200 (72.00%), Query Frame = 0

Query: 21  NSSPPFLISPFPQSFTLTPTPKT--SPLRLSSSPVAAVPSPATNPPL-DAAPPSASDVVK 80
           N  PP    P   +  + PT  T   P RLS+S   A  +   N  + + AP SAS+VV 
Sbjct: 20  NHLPPSFFLP---TKLVKPTSLTHSQPPRLSASYGPAAKAATANDVVPETAPTSASEVVS 79

Query: 81  DFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMDLQFVIDD 140
            FY  +N  DL+SV DLIA  CVYEDL+FSSPFVGRK IL FF KF++S S DLQFVIDD
Sbjct: 80  SFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIESTSTDLQFVIDD 139

Query: 141 ISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPAFKPGEMA 200
           IST+DSSAVGV WHLEWKGK FPFSKGCSFYRL V  DGKRQI+Y RD VEPA KPGE  
Sbjct: 140 ISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEV-IDGKRQIVYGRDCVEPAIKPGETV 199

Query: 201 LTAIRGVTWLLEKFPQLADR 218
           L AI+GVTWLL+KFPQLAD+
Sbjct: 200 LAAIKGVTWLLQKFPQLADQ 215

BLAST of Sed0018292 vs. TAIR 10
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-26
Identity = 50/146 (34.25%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 71  SASDVVKDFYDGINRRDLASVEDLIAHSCVYEDLIFSSPFVGRKEILGFFHKFVDSISMD 130
           S  D V  FY  IN ++   +   I+  C  +D  F  PF G++E + FF + V S+  +
Sbjct: 74  SGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEAMEFFEELVKSMGQN 133

Query: 131 LQFVIDDISTQDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVVAADGKRQIIYARDSVEPA 190
           ++F ++++   D  +  V WHLEWKG++ PF++GCSFY   +   G+  I  AR  +E  
Sbjct: 134 VKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEF-IDEGGRLVIRNARILIESP 193

Query: 191 FKPGEMALTAIRGVTWLLEKFPQLAD 217
            KPG + L+ ++ +T+L ++FP+ A+
Sbjct: 194 IKPGGITLSLLKNITFLFDEFPKGAE 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023518153.12.4e-7371.75uncharacterized protein LOC111781680 isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_022991155.12.4e-7371.49uncharacterized protein LOC111487838 isoform X2 [Cucurbita maxima][more]
XP_022133956.13.1e-7372.52uncharacterized protein LOC111006367 isoform X1 [Momordica charantia][more]
XP_022955016.17.0e-7371.04uncharacterized protein LOC111457092 isoform X2 [Cucurbita moschata][more]
KAG6602392.11.2e-7271.04hypothetical protein SDJN03_07625, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JS341.2e-7371.49uncharacterized protein LOC111487838 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1BWM31.5e-7372.52uncharacterized protein LOC111006367 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1GSJ53.4e-7371.04uncharacterized protein LOC111457092 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A0A0KQZ43.7e-7271.56SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517760 ... [more]
A0A1S3C8U36.4e-7270.67uncharacterized protein LOC103498136 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
AT1G71480.12.2e-6163.50Nuclear transport factor 2 (NTF2) family protein [more]
AT5G41470.15.2e-2634.25Nuclear transport factor 2 (NTF2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037401SnoaL-like domainPFAMPF12680SnoaL_2coord: 76..177
e-value: 3.4E-11
score: 43.6
NoneNo IPR availableGENE3D3.10.450.50coord: 65..182
e-value: 4.2E-14
score: 54.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..56
NoneNo IPR availablePANTHERPTHR33698:SF3NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEINcoord: 49..217
NoneNo IPR availablePANTHERPTHR33698NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEINcoord: 49..217
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 69..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018292.1Sed0018292.1mRNA