Sed0018249 (gene) Chayote v1

Overview


Name	Sed0018249
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like
Location	LG06: 36491930 .. 36498044 (+)
RNA-Seq Expression	Sed0018249
Synteny	Sed0018249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAATGGGCATCTCTAATTTTAAAAGGAAGAAAAAAAAAACTCCAATTTTGTCCTGGGCCCCTGGAAACCCGAACGAAAATCCACGAGAGTTTGGTAATTTGGTTCAGAAGTCACAAAACCAGAAACTCTGATCCAGTGGTAACCTCGTCGAGAGCTTGAGAAAATGGCGTCAGGGTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATCGATTTCAGCGATTGTATGTCCCGTTGCCGAGAGCCCAAAGACTGTACTCTTCTCCGAGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGGTAACGAACTCCTTCTCCTTCAATTCCCCCTTCCTTTCTTGCTCATTCATTCATTTCCTGAATAGCGCTTACATGTGTCGCTCCTTGATTCTTTGAGCTTTTGATGCCTAATTCGACTTGCCTTCTGTTTTCAATGAGCTATAATTTCTGGAGATTTGGTTTAGATCTGATGATTGCCATGATTTCTGCAGAAACTTGAATTTGGGGCTGTTTGGTTTTGTTTCTTTAGGTGATAGTAGTGTGATCCATTTAGGGATAGGTTTTTGTGGCTTCTAGTTCCAATTTAACATCGTTTTTCAATCTTCTGTTGAATGTTTTAGAGTTCCAATCAATGAGAATGGATGTTCTAGAAAGGTACGGAGGATCCTCTTACATTTTCTGTTACTCGTTTTGTATAATTACGGCAGGGTCATCTCTATTGCTTCAAGTGAGTGGCTTCCCACTCATTGCTTCTTCTTCTTATTTTTTTTTTGTCTATGTCCGTGAGTATCGAGTCTCGACTATTCACACGGTACGATTACTTCTGCTTCGAGAGCATCATGAACGTGCCTTAATTCTAGTAATCAAAAGATAAACCCTAAAATGCTCTCTCCTTTCTCTTCTGATTCCTCCCTCTTCTGTCTCCACTCCACCCTTTCGTTCATCTTTTGCTAATCATCTGCCATGCTTTCTGCTTCTACCTTCAAGATTGACAAGAGAGCTTTTCATTTTCAAGATGGCCCAAGGATCTTAAACTACTTTCCTTTCATTGACTCTTCCATCCGTAATGTTGTATGCATCTCCCTCGACAAGGTTCTTATCCCTTGGTTTCTAGAATGCTTCGGTTGACTTAGTGAGCTTCCCTTCACTAAGAAATTTTACAGAGAGTCGGATTCACGAGTCGACCATCTGGATTTAAAAGCTTTCTAACAAGAAAGGTCATAATGCAGGCTACAGAGATTGCCAAGGATAATAGAAATGGCCTCACTAGCAAAATTTTGCTCCCGATCGACTCTACAAAAAAGGGCTGGAAAGGATTTATCTGAGCCCTCGACACCTTCTTTGCAGCTTCCAAAGAAACTAACTCCCTTACCCACGTCATTATGGATTGCATCTTCTACCTACAATGACTGTCCTCTTGTTCTTCCAAAAAACAATGGACATTCTTTTTGAAACCAACCTCTCTAGGCCATCAACCATCATCATCCATAGAAGACTCTTCCATGGTTCTTGGAAGTCCATTGAATCAGCTTTGAGACTTGAGTATTCCTCCTCCCTCTCCTAACACCCTTCCAAGCCAATAAGGCTCTCTTCTATTGCATCAATTCCGGGCAAGTTGGTACTATGAAAAATATTAAGGATTGGTATAGGGTGGGACAACATTGTGTCAGATTCAGCCCGCAATCACCAAAACTCTTTCGTGCTCCCTGAGTCATCCCCTGCCATGGAGGGTGGATCATGGGTAAAGGCAACAAACAGATGGAACATTGACACTTTCAAATTGATTAGGGACCAATGTGTAGGCTACCTCCATGCCGCTAAGAGAAATACAGAGCTCTCAAAACTCATGGTAGCCCATATCAAGGTGAAGAGGAAACCCACCGACTTCCTCCCACAATCCATCTTTCTCCCTTCTTCAACAACCTTTCCATCGAACATCATTTGGATTGAACATTTCTGCTTGATTGACTCTCATTTGGGCTATAAAAAAGATGTACACTTTTTTTTTTGATAGGAAACAAAATATTTTCATTGATAGTTTGAAAATATACATCTTATCAGAGCAGTTATATAAGGCTATACCACGGAGAGATTAATGTGGTTAAGTCATAACTACAAAATGGAGAGATAGAATGGCACCAATACAAGGCCAAGTACATAATAGATTCAATAAGAGAATTGTAATCCTTGTAGGTGTGGCTATCATTAAAAAGTCTGTTGTTCCTTTCCTTCCATATACTCCATAAAAAAACATAGATCATGCTAAGCCAAAGATGAACGTCTTTTGGGTTTTGCTCCTTCTTCAGATGACCCACACGACACCATTGACCCATGCTCCATCACTATTGATGGAACAAAGCCCATTGAGTCTGACCCTGCGCTGGTAGCATCCTATGTTTCCCGAGGAATAATAGGATTGGGTTGTCCCGCTTATTCCCCTTGCACAAATCTCTTAAGTTATCTCTTTCTTCCTTTACACACAACTCCCTTCCTCTATTACTATTAGATCATGATAGTGACTTAAATCTGGGAAAAAAATCCTTTGGGATAATACCCTCTCCCCCTACCCCGTCTTGTACCCCATTGTATTCAGACTCTTTCTACTCTCCCCCTCTGTTACCCCATCATGTGTCCTTTCTCATTGGTTTATGACTCCTCTACACTTTGATATTATGGATGAATTCTTAGCCCCAATTACAACACCTCTCTCTCTTTCTCATTTCTCCAAGAACAATGCTTCTCCATCATCCTCCAGACTCTCCTTTCACACTCTACCTTCTTTTCTGCCCATGCCCCTCATGGATCCCGAGCACATTGATACCAAGATGTTGGTCATTGGAGGAAATCTACCTCTTTTACTAAAGACACAATTCACTCCACCAACACCCCCTTTTCTTACTCTAATTCGGATAGGAATTATTGCTCTTCCCCTGCCAACTCATCTCCCCCGAACTCTCCTCCCCTGGGTAAGACTCCGACCCTTCATTACTTAGACTCTTTCCCGAATTTAGGTGAATTTTTCACAACAACCTCTGAAGATACTTATCCCTCCATGTGAAGGTATGAAGTTGATATCGACTAAGGATGGTTGTTCTTTTAGATGAATCAAAGTTTCCTAAACACGTATTATATTTGGACCAGATTGGAGCCACAACTACGGACTATCATACCAACACGATTACACGAACATTGAAGCCATCTTGGAGAACCCAGCCACTTCGGTGCTGATCATCATTCTTTGGTTGAAGAATCTGGGTTTTTGTATTGGCACCATTTCGAAAGTTAAACAAGCTACTGCCTCAAAGAAGAAGCCAAAGGGAATAGGGAGCTGATCAACCTCATATCAAGTGTGCAATACAATGAAAAAGCATCTTCTTCAAAAGGCTTGGCTCTCGTGATCGCCTTGTAAATTAGAGAGAGTGTCGATAAAGAAGATAATAGCCAAGGGTCAATAATATTGGAGAAATACTTAGATTTGCTATTTTTGGAGGGTTAGTTTTTATTTTATACGATTTTCATGGTTGATTTTTGGATTTTTTTTTCTACCTTGGTTGATTCTGAAAATATTTTCTTCCTTTTATGGATTCTTTTTTCTTCTATTCTCTTCTTTCTTGGATTAAAAAACAAAATCGCAATGTTTAAACAGCCGCACGCCTTCGTTAAAGGCGACGAGGCTGTGGCACCTCTTTGAATATGCTCGCCACGGTAAGTTGTAAGGCGCAAGGACCCCAGGTCGCCTTGCCATAGATCACTGCTTGTAAGCAACTGAGCTTTTGTACTTTTGGGTTTTATTCTAGATCGTCCTTTGATGTTCTCATTTAAAACCCATTAATTTGGAGAATATCATCTGCTGGCCTTTTTGTATTTTTAGTTTGATCCTTCTTTGGACAGACTTTGTTGCCCCTCTGTTTTTGGCCCTCTCCTTTCTCCTCTCATCTTCTGTTTTCGATAGGTTGTACCTTTTCATCTCATCAATGAATTGTTTATTTCCTTAAAAAAAGACTTTTACATGGTACTATTGTCTCATCCTATTATATTTGGTTGGCATGAAAACTCTAAAAAAGTTAATTATTAGGTAGGGTGGTCATGACCATCATAGATTGAACCAATTTCCTTTAAGCAGTTTCTGATCTAAAAAAGCCTTTATTTAATTGATAGGCCAACTAATGATGATTTTCCTGGTGTATTTGTGATTATCACGGCTGCCTCTTTGGTACTAGATTTGGATAAGTGGAAGTTTTAGTCTGCTGAGGCATTTTTTAAAAATCACATTAGCATGATTTTATGTTTTAAAGATGCTTTTTTTTAAAGATACGGAATCATGCTCACTTTCCCTCTCTGAACCTCGACCTACAATATTTGGATGTCGAAGAAGTCCATTAAAAATTATTTCTTAAGGGACTATTGAACTCATAATCTCTTAATTCTCAAACTAGTAGATCAACCCATAATGGCAGTTTTATAACTTTGGGTGTGAAACAATTAAATAATAATATTATTTAACGGTGCATTTTAGGTTTAGAGAGAGGGTAGCGTAGCCATAATGTGGTAGCTACATTGAATATTTCTTTACTATCCCAAAAGGTTGAATTTTTCTTTTAAGTTTAATGCAAGTTTTTCTGTTCTGTTTTTTTTTTTTTTTAAAGTTAAAAAAGTGGGATAAGTTTGGTATATGGAATATATAGTGTAGTTACACCGAATTTTTTTATTCAACCAATATTTTCTCCTTATTAGATAACATAGAATTTCTTCTTAGAACAATTTGGCAATAAGGAGAGTAATCTACCTTTCTTATAAAGATTGTGAGACCTTCTCACTTTCCAATGTAGAACCCTAAACACTTTTCGATGGATTTTAGCACGTCTTTAGGTTGTTGAAGTCGAAGACACAGGATGGCGAAGCCATTGTGCTTGTGGCTTCTCCATCCTGTATCTTCGACTTCACCAACCGGTTTTGACCATTAACTGGATGTATCGAGCTTCATCATGCATCAAATCTTTTCTTTTGCTTCTTCTCCGATTGGACTTGCACTAGAGTTATCCTCCCCTCCTCAATCGATCGGAACGGCTCACGCTCCACCTCCCCCTTTTACTATTGACTTGAAGGGTACATGGCTCGACTTGTCCTTTTCACCGTTGGTGAGGAAACAAACTATCATTCGTCTCTCTCCCTCTCTTCTGGAGAAATTGCTGAGGTCAAAACCTTGAAAATCATCTCTCCCCACGAAGCATCGGTATTGATGGATGTTTGTGGCATTGGCGACTCATTTGTCTCCTCCTACCAAGATGATAAATGTGATTGAGCTTGAAGAGAGGAAACCCTATTTTGGTTCTTGCTCCAAAGCCGGTGCCGCTTTGAACGGTTTTTGGCACAAATCTTTTGACTCTTGACCCAAACCGGACTTCTTTGCACAAAGAACTTTAATGAAGAAAAATGAGGAAATACAAAAGTGATCTTTTCTTTTATGTTGGTTTTTTTTTTTGATAGGAAACAGAAAACTTTCATTGATAAAATGAATGTGATCTTTTATGTTATTGTGGGCATACTATCTCTACGGGCATTCCCTTAGCGGCATCCAGTTTTGCAACTTGAACATCATCAAGCACATCAGTGTTAAAGTAATAAGAACACTTGGATAAACGTACAAAATGCTAGGAGTGTGATCTGCTTTTATTAAAAATGATTCTGCCTACTTAGTAAGAATCAGTCCTAATTCAAATTGTTCGTTTGAACCGTACCTTGCAGTTCCAAAGAAGAAACCGTATTTACAAGGAGGAGCAGCGTAAACTAAGAGCAGCCAAACGGGAGGCAAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAAGCATCATTCAGAGACTGAATAATGAAAAATGCTTAGACATATGTTGTTATTTGAACAGTTTTTGCCTTGTCAATGACATCTATTTGCCTTTTTCTGAATCCGTTATGAAATTCTCAAGTCATGCAAGATGGCCAATTCATTTTTTTCCTTGCTCTGCGTTATCTGGTTGAAGATGGTGTTAACTGTGTTATTGACAAATCTTATTTTCAAGTTATGGTTTAATGAATAAGCTCTTAGAACACTGCCA

mRNA sequence

CCCAATGGGCATCTCTAATTTTAAAAGGAAGAAAAAAAAAACTCCAATTTTGTCCTGGGCCCCTGGAAACCCGAACGAAAATCCACGAGAGTTTGGTAATTTGGTTCAGAAGTCACAAAACCAGAAACTCTGATCCAGTGGTAACCTCGTCGAGAGCTTGAGAAAATGGCGTCAGGGTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATCGATTTCAGCGATTGTATGTCCCGTTGCCGAGAGCCCAAAGACTGTACTCTTCTCCGAGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGTTCCAAAGAAGAAACCGTATTTACAAGGAGGAGCAGCGTAAACTAAGAGCAGCCAAACGGGAGGCAAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAGTCATAAGCATCATTCAGAGACTGAATAATGAAAAATGCTTAGACATATGTTGTTATTTGAACAGTTTTTGCCTTGTCAATGACATCTATTTGCCTTTTTCTGAATCCGTTATGAAATTCTCAAGTCATGCAAGATGGCCAATTCATTTTTTTCCTTGCTCTGCGTTATCTGGTTGAAGATGGTGTTAACTGTGTTATTGACAAATCTTATTTTCAAGTTATGGTTTAATGAATAAGCTCTTAGAACACTGCCA

Coding sequence (CDS)

ATGGCGTCAGGGTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATCGATTTCAGCGATTGTATGTCCCGTTGCCGAGAGCCCAAAGACTGTACTCTTCTCCGAGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGTTCCAAAGAAGAAACCGTATTTACAAGGAGGAGCAGCGTAAACTAAGAGCAGCCAAACGGGAGGCAAAAGAGGGTAAACATGTTGATGCTGCTCATGCATAG

Protein sequence

MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHVDAAHA

Homology

[Close]

BLAST of Sed0018249 vs. NCBI nr
Match: XP_022155272.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAA+REAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. NCBI nr
Match: XP_038905985.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAA+R+AKEGKHVDAAHA
Sbjct: 61 EQRKLRAAERDAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. NCBI nr
Match: XP_022948762.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata] >XP_022998534.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita maxima] >KAG7036666.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.0 bits (432), Expect = 4.3e-39
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAAK EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. NCBI nr
Match: XP_011652934.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus] >KGN52808.1 hypothetical protein Csa_015424 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 7.3e-39
Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAA+REAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. NCBI nr
Match: XP_023521877.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-38
Identity = 79/83 (95.18%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLR AK EAKEGKHVDAAHA
Sbjct: 61 EQRKLRVAKGEAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. ExPASy Swiss-Prot
Match: O82238 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana OX=3702 GN=At2g47690 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-35
Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
           MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 95

Query: 61  EQRKLRAAKR---EAKEGKH 78
           EQRKLRAA R   EA +G H
Sbjct: 96  EQRKLRAASRKGEEAGDGTH 115

[Close]

BLAST of Sed0018249 vs. ExPASy Swiss-Prot
Match: Q9LZI6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana OX=3702 GN=At3g62790 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-35
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 1  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKREAKE 75
          EQRKLRAA R+ +E
Sbjct: 61 EQRKLRAASRKGEE 74

[Close]

BLAST of Sed0018249 vs. ExPASy TrEMBL
Match: A0A6J1DNW8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Momordica charantia OX=3673 GN=LOC111022414 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.1e-40
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAA+REAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. ExPASy TrEMBL
Match: A0A6J1KEK7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita maxima OX=3661 GN=LOC111493141 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-39
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAAK EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. ExPASy TrEMBL
Match: A0A6J1GA50 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moschata OX=3662 GN=LOC111452335 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-39
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAAK EAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. ExPASy TrEMBL
Match: A0A0A0KTA7 (Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.5e-39
Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          EQRKLRAA+REAKEGKHVDAAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Sed0018249 vs. ExPASy TrEMBL
Match: A0A6J1F476 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moschata OX=3662 GN=LOC111442238 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38
Identity = 78/83 (93.98%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 60

Query: 61 EQRKLRAAKREAKEGKHVDAAHA 84
          E+RKLRAA+REAKEGK V+AAHA
Sbjct: 61 EKRKLRAAEREAKEGKQVEAAHA 83

[Close]

BLAST of Sed0018249 vs. TAIR 10
Match: AT2G47690.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 147.1 bits (370), Expect = 6.1e-36
Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
           MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 36  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 95

Query: 61  EQRKLRAAKR---EAKEGKH 78
           EQRKLRAA R   EA +G H
Sbjct: 96  EQRKLRAASRKGEEAGDGTH 115

[Close]

BLAST of Sed0018249 vs. TAIR 10
Match: AT3G62790.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 147.1 bits (370), Expect = 6.1e-36
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKE
Sbjct: 1  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 61 EQRKLRAAKREAKE 75
          EQRKLRAA R+ +E
Sbjct: 61 EQRKLRAASRKGEE 74

[Close]

BLAST of Sed0018249 vs. TAIR 10
Match: AT2G47690.2 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 113.6 bits (283), Expect = 7.5e-26
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0


Query: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKE 51
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKE
Sbjct: 36 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKE 85

The following BLAST results are available for this feature:

BLAST of Sed0018249 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155272.1	1.5e-39	97.59	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charanti...	[more]
XP_038905985.1	3.3e-39	96.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida]	[more]
XP_022948762.1	4.3e-39	96.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata...	[more]
XP_011652934.1	7.3e-39	95.18	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus] >KGN52...	[more]
XP_023521877.1	1.2e-38	95.18	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo sub...	[more]

BLAST of Sed0018249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82238	8.7e-35	87.50	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana ...	[more]
Q9LZI6	8.7e-35	90.54	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana ...	[more]

BLAST of Sed0018249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNW8	7.1e-40	97.59	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Momordica charan...	[more]
A0A6J1KEK7	2.1e-39	96.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita maxima...	[more]
A0A6J1GA50	2.1e-39	96.39	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moscha...	[more]
A0A0A0KTA7	3.5e-39	95.18	Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=3 SV=1	[more]
A0A6J1F476	1.7e-38	93.98	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like OS=Cucurbita moscha...	[more]

BLAST of Sed0018249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47690.1	6.1e-36	87.50	NADH-ubiquinone oxidoreductase-related	[more]
AT3G62790.1	6.1e-36	90.54	NADH-ubiquinone oxidoreductase-related	[more]
AT2G47690.2	7.5e-26	94.00	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..78
None	No IPR available	PANTHER	PTHR15224:SF5	BNAC04G00180D PROTEIN	coord: 1..82
None	No IPR available	PROSITE	PS51808	CHCH	coord: 11..52 score: 11.299646
IPR019342	NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5	PFAM	PF10200	Ndufs5	coord: 12..66 e-value: 1.6E-6 score: 28.3
IPR019342	NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5	PANTHER	PTHR15224	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018249.1	Sed0018249.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005747	mitochondrial respiratory chain complex I